Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0009604

Physical Location & Seq

Genomic Coordinates Reverse (-)

54325167 .. 54332915

Gene Structure 7749 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G030130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3048 bp

ATGGAGGATCTCTCTGAGCTAAAGATTGGGAATTCCGTCGAGTCCTTCCACAAGTTTGTCGACTCGCAGAGGGAGCTCTTCCACCGCCAGATCGATGAGCTCCAGAAAATCGTCGTCACCCAATGCAAGCTCACCGGGGCCAATCCTCTCTCCCAAGAGATGGCAGCTGGTGCTCTTTCTATTAATATTGGAAAAAGACCTAGAGATTTGTTAAATCCAAAGGCTATCAAGTATATGCAATCCGTTTTTTCTATTAAAGATGCGATTACGAAGAAGGAATCTCGGGAGATCAGTGCGCTGTTCGGGGTTTCTGTCTCACAGGTTCGTGATTTTTTTAATAGTCAACGATCCAGGGTTAGAAAAATAGTTCAGTTGTCAAGGGAGAAGGCCATCAGATCCACGGAACATAAAGAATTGCTGGAGGGGGTGCCGACAAGCTCTGATCCATTGATACCAATTAATCCCCTTCCTTTAAACACTATTGATCCGTCCAATGTTGAGGATGCACCATCTTGCTCAACACAAGATGATACTCTTTCTGGACTAGATGACGTTGATAAACATTTTGTTGAAAATATTTTCAACTTGATGCGGAAAGAAGAAACATTTTCTGGGCAAGTGAAAGTGTTAGAGTTGATATTGCGGATACAAAATTCTTCAGTATTATGCTGGTTTTTAACTAAAGGTGGCGTGATGATTTTAGTAACATGGTTGACACAAGCAGCTGATGAAGAACAAACGAGTGTTCTGCTTGTCATCTTAAAGGTTCTTTGCCATTTGCCTCTATCCAAAGCTCTTCCTGTTCATATGTCAGCCATACTGCAAAGTGTTAATAGACTGCGGTTTTACAGGACACCAGAAATATCGAACAGGGCAAGGGTTTTGTTATCAAGATGGAGCAAGTCTTTAGCAAGAAGCCAAGCTTTGAAGAAACCAAATGGCATGAAAACATCTAATGATTCACAAGAATTAGCATTGCTGAAGCAAAGTATTGATGAAGCTATAGGCGATGATCCATGGAATTCAAATGGTGATGTTAACGAAGACATCCTTGCATTGCCGTTTGAAAGTGCAGATAAATTAAGGAAATTGGAGTCTTCAGAACCAGTGAAGCTATTGACAGCATCATCAGATGATTCTAATAAGAAACACATCCTAGGTGTATCTTCATCCCAATTTAGAGGACGCAGAAAAGTTCAATTGGTGGAACAGCCCGGCCAAAAAACAGCGGGGAGAAGTTCACAGGTTGCAAAAACAACACCTGTCAGTCAGGCTCGCCCAATGTCTGTTGATGATATCCAAAAAGCAAAATTGCGAGCACAATATATGCAGAGCAAGTATGGAAAGTCTGCTTCCTCTAATGAAAATAAAGAAGTGAAGGCTGAAGGCGTGAACAAACCTCCAATCGCTCAGGCCAGCATTTTACCTGCAGTACCTAATGTTCCAGTTCAGTCTAGTATTGAGGAATCCAAGAAACCTGTGACACTTCCTTTGAAAGAGAGGGAAACTCATGATATAAGTTTACAGCCTATTGGGAGTTTCCAGACTATTGCTCCAAAGCTGAAAACGGATATGAAGGAGCACATCTGGGAGAAGTGCAGGAGAGTCCAGGTGCCGTGGAAGACACCACCAGAAATAAAACTTAATCCAGGATGGAGGGTTGGAGGTGGTGAGAATGGCAAAGAAATGGAAGGCCAGAAAAACAGAAACCACCGCGAGCAGGAAACTATCTACAAGACATTCAAGGAGATACCACCTAACCCGAAGGAACCTTGGGACATTGAAATGGACTATGATGACTCATTGACTCCAGTAATACCAACAGAACAGCCGCCTGACACTGACTGTACTGAAACACAACCTTCACATAGTCGAGAAGTAAATAATGCAGCAGAAACGTTGGTTGTTCCTTCTCAAGGAGTAAACAGTGTTGTTTCTATGGTGCCGCTAACTAATATGGCAAGTAGCACAGCTGAACCAGATCTAGAGCTGCTCGCTGTGCTGCTAAAAAATCCAGAATTGGTGTTTGCCTTGACGTCTGGGCAGGCTGGTAACTTGTCCAGTGAGGATACAGTAAAATTGCTGGATATGATTAAGGCTGGTGGGGCTGGTTTCGCTGGTAATTTAAATGGGTTAGCTAGTAAAATGGAGGAGAAGGTTGAAGTTTCTCTTCCATCCCCAACACCTTCAAGCAACCCTGGAACGAGTGGATGGAGACCAGAAGCTACAAGAAATGCATTTGCCCAACAAAACTCGATGCAGAACAGAGTGAGCCCTGGTTACAGTTCACCAGCAATGGCGGCCAACAGCAACTTGGTGCTTTCACAACTTCCATCTGCTCTTACTAGTCCTCTACCGCAGCGATTATCGGCTGCTCAACAAGCAGTACCTGCATACTCACCAGAGCACGTCCATCAATTTCCCCATACTACAACCGTATCACACTTGCAGCATAACCATTCGAACATGGCTGTTCCTTCTGTTTGGGGTGAAAGCACAAGTAATGGCAAACCAGGCCCGTCGTATAACTCATATAATGTAGCAGCGGAAAGGCAACCCAACTCGCTCCCACCGCCCTTCTCATCCAATCTGACACACCAACAAAGACGCTCGCCGCAACCACTGCAACAACAAACCCATTACTCCGATTCTCCCCATTACTCTGAATCGCCCTATTTCTCTAAACCACCAACTGGGAAACCAGTCCCTCTGTCTGATTCATGGAGAGCTGGTAGGCAGGGTAACTATCATTATTTAGAGAACCAAAATCAGTACTACAATGCACCATCATATGGAGGACCTTTGCAGCAGCAACCTCAGTTGAGGTCGGGTCCTCCTTATGAAGGAAATGAATATGCTAGCAATGGAGGAGGTTTTGAATCGTGGAGTCCTCCGGAGGATAGTCCGGCTAGAAATGCCGATTATAATATGCATGGAAGAAACGTGTACAGGCCTACTGACAGGTCGAGGCAAAGGAATACTCAGACCCCTGGATACCGAGATTATAGTAGGCAGGGACACAGGTGGCCGGACCGCGGCAGACACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009791 GO:0009889 GO:0010228 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

1015

Amino Acids

112.63

Weight (kDa)

8.61

Isoelectric Point (pI)

60.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009604)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02560 AT4G02560
fragaria_vesca	FvH4_2g25100 FvH4_2g25100 FvH4_2g25100
malus_domestica	MD03G1284300.v1.1 MD11G1302000.v1.1
prunus_persica	Prupe.8G255600_v2.0.a1 Prupe.8G255600_v2.0.a1
pyrus_communis	pycom03g22510 pycom11g26460
rosa_chinensis	RchiOBHm_Chr6g0293161
rosa_laevigata	RLG00000011970
rosa_multiflora	Rmu_sc0014786.1_g000002
rosa_roxburghii	Rroxscaffold_7G00174400
rosa_rugosa	Rorug06G0233000 Rorug06G0233100
rosa_samantha	Rh6AG345700 Rh6BG353500 Rh6CG359900 Rh6DG346300
rosa_wichuraiana	Rw6G030130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2925
AatII	GACGTC	1 cut(s)	2039
Acc36I	ACCTGC	2 cut(s)	1435, 2398
AccB1I	GGYRCC	3 cut(s)	427, 1612, 1942
AccB7I	CCANNNNNTGG	3 cut(s)	160, 2693, 2792
AccI	GTMKAC	1 cut(s)	60
AccII	CGCG	2 cut(s)	1716, 3036
AccIII	TCCGGA	1 cut(s)	2893
AclI	AACGTT	1 cut(s)	1898
AclWI	GGATC	6 cut(s)	15, 342, 390, 437, 479, 1007
AcoI	YGGCCR	3 cut(s)	1216, 2301, 3026
AcsI	RAATTY	3 cut(s)	31, 652, 1021
AcuI	CTGAAG	4 cut(s)	642, 1001, 1083, 1404
AcyI	GRCGYC	1 cut(s)	2036
AfaI	GTAC	5 cut(s)	1434, 1849, 2388, 2774, 2948
AfiI	CCNNNNNNNGG	7 cut(s)	160, 1720, 1916, 2693, 2792, 2843, 3035
AflIII	ACRYGT	1 cut(s)	2943
AhlI	ACTAGT	1 cut(s)	2345
AjiI	CACGTC	1 cut(s)	2410
AjnI	CCWGG	7 cut(s)	350, 1608, 1648, 2197, 2275, 2512, 2989
Alw21I	GWGCWC	6 cut(s)	78, 102, 175, 1321, 1584, 2409
Alw26I	GTCTC	2 cut(s)	319, 2209
AlwI	GGATC	6 cut(s)	15, 342, 390, 437, 479, 1007
AlwNI	CAGNNNCTG	2 cut(s)	2390, 3045
Ama87I	CYCGRG	1 cut(s)	282
Aor13HI	TCCGGA	1 cut(s)	2893
AoxI	GGCC	9 cut(s)	138, 387, 1216, 1413, 1693, 2301, 2515, 2951, 3026
ApoI	RAATTY	3 cut(s)	31, 652, 1021
ArsI	GACNNNNNNTTYG	2 cut(s)	1474, 1506
AseI	ATTAAT	2 cut(s)	183, 459
AspA2I	CCTAGG	1 cut(s)	1156
AspLEI	GCGC	1 cut(s)	298
AspS9I	GGNCC	5 cut(s)	138, 2516, 2798, 2831, 3031
AsuC2I	CCSGG	2 cut(s)	136, 1215
AsuHPI	GGTGA	7 cut(s)	109, 124, 1043, 1682, 2280, 2391, 2501
AsuII	TTCGAA	1 cut(s)	2462
AsuNHI	GCTAGC	1 cut(s)	2858
AvaI	CYCGRG	1 cut(s)	282
AvaII	GGWCC	3 cut(s)	2798, 2831, 3031
AvrII	CCTAGG	1 cut(s)	1156
BaeI	ACNNNNGTAYC	2 cut(s)	2421, 2454
BanI	GGYRCC	3 cut(s)	427, 1612, 1942
BanII	GRGCYC	3 cut(s)	78, 102, 2276
BbsI	GAAGAC	3 cut(s)	1050, 1089, 1628
Bbv12I	GWGCWC	6 cut(s)	78, 102, 175, 1321, 1584, 2409
BceAI	ACGGC	2 cut(s)	1045, 1600
BcgI	CGANNNNNNTGC	2 cut(s)	730, 764
BciT130I	CCWGG	7 cut(s)	352, 1610, 1650, 2199, 2277, 2514, 2991
BciVI	GTATCC	3 cut(s)	639, 2062, 2987
BcnI	CCSGG	2 cut(s)	136, 1215
BcoDI	GTCTC	2 cut(s)	319, 2209
BcuI	ACTAGT	1 cut(s)	2345
BfaI	CTAG	9 cut(s)	201, 545, 1157, 1455, 1985, 2139, 2346, 2859, 2910
BfmI	CTRYAG	2 cut(s)	1002, 1428
BfuAI	ACCTGC	2 cut(s)	1435, 2398
BfuI	GTATCC	3 cut(s)	639, 2062, 2987
BglII	AGATCT	1 cut(s)	1981
BlnI	CCTAGG	1 cut(s)	1156
BmcAI	AGTACT	1 cut(s)	2774
Bme1390I	CCNGG	9 cut(s)	136, 352, 1215, 1610, 1650, 2199, 2277, 2514, 2991
Bme18I	GGWCC	3 cut(s)	2798, 2831, 3031
BmeT110I	CYCGRG	1 cut(s)	282
BmgBI	CACGTC	1 cut(s)	2410
BmgT120I	GGNCC	5 cut(s)	138, 2516, 2798, 2831, 3031
BmiI	GGNNCC	6 cut(s)	139, 429, 1614, 1770, 1944, 2832
BmrFI	CCNGG	9 cut(s)	136, 352, 1215, 1610, 1650, 2199, 2277, 2514, 2991
BmrI	ACTGGG	1 cut(s)	2703
BmsI	GCATC	5 cut(s)	250, 493, 579, 1133, 2247
BmtI	GCTAGC	1 cut(s)	2862
BmuI	ACTGGG	1 cut(s)	2703
BpiI	GAAGAC	3 cut(s)	1050, 1089, 1628
BplI	GAGNNNNNCTC	3 cut(s)	28, 1492, 1524
BpmI	CTGGAG	3 cut(s)	86, 440, 1794
Bpu10I	CCTNAGC	1 cut(s)	1410
Bpu14I	TTCGAA	1 cut(s)	2462
BpuEI	CTTGAG	1 cut(s)	1899
BpuMI	CCSGG	2 cut(s)	136, 1215
Bsa29I	ATCGAT	1 cut(s)	93
BsaHI	GRCGYC	1 cut(s)	2036
BsaI	GGTCTC	1 cut(s)	2209
BsaWI	WCCGGW	1 cut(s)	2893
BsaXI	ACNNNNNCTCC	4 cut(s)	1537, 1567, 2716, 2746
Bsc4I	CCNNNNNNNGG	7 cut(s)	160, 1720, 1916, 2693, 2792, 2843, 3035
Bse1I	ACTGG	6 cut(s)	1106, 1445, 1811, 2061, 2698, 2702
Bse3DI	GCAATG	4 cut(s)	974, 1055, 2301, 2869
BseAI	TCCGGA	1 cut(s)	2893
BseBI	CCWGG	7 cut(s)	352, 1610, 1650, 2199, 2277, 2514, 2991
BseCI	ATCGAT	1 cut(s)	93
BseGI	GGATG	8 cut(s)	508, 1047, 1152, 1169, 1658, 2174, 2216, 2582
BseLI	CCNNNNNNNGG	7 cut(s)	160, 1720, 1916, 2693, 2792, 2843, 3035
BseMI	GCAATG	4 cut(s)	974, 1055, 2301, 2869
BseMII	CTCAG	4 cut(s)	6, 1424, 2831, 2996
BseNI	ACTGG	6 cut(s)	1106, 1445, 1811, 2061, 2698, 2702
BseRI	GAGGAG	2 cut(s)	2165, 2883
BsgI	GTGCAG	2 cut(s)	1092, 1618
Bsh1236I	CGCG	2 cut(s)	1716, 3036
BshFI	GGCC	9 cut(s)	140, 389, 1218, 1415, 1695, 2303, 2517, 2953, 3028
BshNI	GGYRCC	3 cut(s)	427, 1612, 1942
BshVI	ATCGAT	1 cut(s)	93
BsiHKAI	GWGCWC	6 cut(s)	78, 102, 175, 1321, 1584, 2409
BsiHKCI	CYCGRG	1 cut(s)	282
BsiSI	CCGG	5 cut(s)	135, 1215, 2894, 2906, 3029
BslFI	GGGAC	3 cut(s)	1790, 2690, 3030
BslI	CCNNNNNNNGG	7 cut(s)	160, 1720, 1916, 2693, 2792, 2843, 3035
BsmAI	GTCTC	2 cut(s)	319, 2209
BsmFI	GGGAC	3 cut(s)	1790, 2690, 3030
BsnI	GGCC	9 cut(s)	140, 389, 1218, 1415, 1695, 2303, 2517, 2953, 3028
Bso31I	GGTCTC	1 cut(s)	2209
BsoBI	CYCGRG	1 cut(s)	282
Bsp119I	TTCGAA	1 cut(s)	2462
Bsp1286I	GDGCHC	7 cut(s)	78, 102, 175, 1321, 1584, 2276, 2409
Bsp13I	TCCGGA	1 cut(s)	2893
Bsp1407I	TGTACA	1 cut(s)	2946
Bsp143I	GATC	9 cut(s)	7, 90, 288, 347, 395, 442, 484, 1012, 1981
Bsp19I	CCATGG	1 cut(s)	1016
BspANI	GGCC	9 cut(s)	140, 389, 1218, 1415, 1695, 2303, 2517, 2953, 3028
BspCNI	CTCAG	4 cut(s)	7, 1423, 2830, 2995
BspDI	ATCGAT	1 cut(s)	93
BspEI	TCCGGA	1 cut(s)	2893
BspFNI	CGCG	2 cut(s)	1716, 3036
BspHI	TCATGA	1 cut(s)	1510
BspLI	GGNNCC	6 cut(s)	139, 429, 1614, 1770, 1944, 2832
BspMAI	CTGCAG	1 cut(s)	1432
BspMI	ACCTGC	2 cut(s)	1435, 2398
BspOI	GCTAGC	1 cut(s)	2862
BspPI	GGATC	6 cut(s)	15, 342, 390, 437, 479, 1007
BspQI	GCTCTTC	2 cut(s)	83, 801
BspT104I	TTCGAA	1 cut(s)	2462
BspT107I	GGYRCC	3 cut(s)	427, 1612, 1942
BspTNI	GGTCTC	1 cut(s)	2209
BsrDI	GCAATG	4 cut(s)	974, 1055, 2301, 2869
BsrGI	TGTACA	1 cut(s)	2946
BsrI	ACTGG	6 cut(s)	1106, 1445, 1811, 2061, 2698, 2702
BssMI	GATC	9 cut(s)	7, 90, 288, 347, 395, 442, 484, 1012, 1981
BssNI	GRCGYC	1 cut(s)	2036
BssT1I	CCWWGG	3 cut(s)	1016, 1156, 1772
Bst2UI	CCWGG	7 cut(s)	352, 1610, 1650, 2199, 2277, 2514, 2991
Bst4CI	ACNGT	5 cut(s)	1847, 1928, 2074, 2285, 2437
Bst6I	CTCTTC	3 cut(s)	83, 801, 2175
BstACI	GRCGYC	1 cut(s)	2036
BstAPI	GCANNNNNTGC	3 cut(s)	170, 2390, 2623
BstAUI	TGTACA	1 cut(s)	2946
BstBI	TTCGAA	1 cut(s)	2462
BstC8I	GCNNGC	9 cut(s)	128, 1276, 1317, 1417, 1718, 1995, 2046, 2612, 2860
BstDEI	CTNAG	4 cut(s)	15, 1410, 2817, 2982
BstDSI	CCRYGG	4 cut(s)	399, 1016, 1616, 3034
BstENI	CCTNNNNNAGG	2 cut(s)	1914, 2841
BstF5I	GGATG	8 cut(s)	508, 1047, 1152, 1169, 1658, 2174, 2216, 2582
BstFNI	CGCG	2 cut(s)	1716, 3036
BstHHI	GCGC	1 cut(s)	298
BstKTI	GATC	9 cut(s)	10, 93, 291, 350, 398, 445, 487, 1015, 1984
BstMAI	GTCTC	2 cut(s)	319, 2209
BstMBI	GATC	9 cut(s)	7, 90, 288, 347, 395, 442, 484, 1012, 1981
BstNI	CCWGG	7 cut(s)	352, 1610, 1650, 2199, 2277, 2514, 2991
BstSCI	CCNGG	9 cut(s)	134, 350, 1213, 1608, 1648, 2197, 2275, 2512, 2989
BstSFI	CTRYAG	2 cut(s)	1002, 1428
BstUI	CGCG	2 cut(s)	1716, 3036
BstV2I	GAAGAC	3 cut(s)	1050, 1089, 1628
BstX2I	RGATCY	3 cut(s)	7, 395, 1981
BstYI	RGATCY	3 cut(s)	7, 395, 1981
Bsu15I	ATCGAT	1 cut(s)	93
BsuI	GTATCC	3 cut(s)	639, 2062, 2987
BsuRI	GGCC	9 cut(s)	140, 389, 1218, 1415, 1695, 2303, 2517, 2953, 3028
BsuTUI	ATCGAT	1 cut(s)	93
BtgI	CCRYGG	4 cut(s)	399, 1016, 1616, 3034
BtgZI	GCGATG	1 cut(s)	1023
BtrI	CACGTC	1 cut(s)	2410
BtsCI	GGATG	8 cut(s)	508, 1047, 1152, 1169, 1658, 2174, 2216, 2582
BtsI	GCAGTG	1 cut(s)	2621
BtsIMutI	CAGTG	7 cut(s)	298, 1113, 1839, 1933, 2068, 2621, 3043
BveI	ACCTGC	2 cut(s)	1435, 2398
Cac8I	GCNNGC	9 cut(s)	128, 1276, 1317, 1417, 1718, 1995, 2046, 2612, 2860
CaiI	CAGNNNCTG	2 cut(s)	2390, 3045
CciI	TCATGA	1 cut(s)	1510
CfoI	GCGC	1 cut(s)	298
Cfr13I	GGNCC	5 cut(s)	138, 2516, 2798, 2831, 3031
Cfr42I	CCGCGG	1 cut(s)	3037
ClaI	ATCGAT	1 cut(s)	93
CpoI	CGGWCCG	1 cut(s)	3031
CseI	GACGC	2 cut(s)	1194, 2616
Csp6I	GTAC	5 cut(s)	1433, 1848, 2387, 2773, 2947
CspI	CGGWCCG	1 cut(s)	3031
CviAII	CATG	7 cut(s)	708, 943, 1017, 1511, 2467, 2721, 2933
CviQI	GTAC	5 cut(s)	1433, 1848, 2387, 2773, 2947
DdeI	CTNAG	4 cut(s)	15, 1410, 2817, 2982
DpnI	GATC	9 cut(s)	9, 92, 290, 349, 397, 444, 486, 1014, 1983
DpnII	GATC	9 cut(s)	7, 90, 288, 347, 395, 442, 484, 1012, 1981
DraI	TTTAAA	2 cut(s)	474, 2127
EaeI	YGGCCR	3 cut(s)	1216, 2301, 3026
Eam1104I	CTCTTC	3 cut(s)	83, 801, 2175
EarI	CTCTTC	3 cut(s)	83, 801, 2175
Ecl136II	GAGCTC	2 cut(s)	76, 100
Eco130I	CCWWGG	3 cut(s)	1016, 1156, 1772
Eco147I	AGGCCT	1 cut(s)	2953
Eco24I	GRGCYC	3 cut(s)	78, 102, 2276
Eco31I	GGTCTC	1 cut(s)	2209
Eco32I	GATATC	1 cut(s)	1297
Eco47I	GGWCC	3 cut(s)	2798, 2831, 3031
Eco53kI	GAGCTC	2 cut(s)	76, 100
Eco57I	CTGAAG	4 cut(s)	642, 1001, 1083, 1404
Eco88I	CYCGRG	1 cut(s)	282
EcoICRI	GAGCTC	2 cut(s)	76, 100
EcoNI	CCTNNNNNAGG	2 cut(s)	1914, 2841
EcoO109I	RGGNCCY	2 cut(s)	2798, 2831
EcoRI	GAATTC	2 cut(s)	31, 1021
EcoRII	CCWGG	7 cut(s)	350, 1608, 1648, 2197, 2275, 2512, 2989
EcoRV	GATATC	1 cut(s)	1297
EcoT14I	CCWWGG	3 cut(s)	1016, 1156, 1772
EcoT22I	ATGCAT	2 cut(s)	2239, 2934
EcoT38I	GRGCYC	3 cut(s)	78, 102, 2276
ErhI	CCWWGG	3 cut(s)	1016, 1156, 1772
FaeI	CATG	7 cut(s)	711, 946, 1020, 1514, 2470, 2724, 2936
FalI	AAGNNNNNCTT	6 cut(s)	907, 939, 1035, 1067, 2154, 2186
FaqI	GGGAC	3 cut(s)	1790, 2690, 3030
FatI	CATG	7 cut(s)	707, 942, 1016, 1510, 2466, 2720, 2932
FauI	CCCGC	1 cut(s)	1222
FauNDI	CATATG	2 cut(s)	807, 2791
FblI	GTMKAC	1 cut(s)	60
FokI	GGATG	8 cut(s)	515, 1034, 1139, 1156, 1665, 2161, 2223, 2569
FriOI	GRGCYC	3 cut(s)	78, 102, 2276
FspBI	CTAG	9 cut(s)	201, 545, 1157, 1455, 1985, 2139, 2346, 2859, 2910
GlaI	GCGC	1 cut(s)	297
GsuI	CTGGAG	3 cut(s)	86, 440, 1794
HaeIII	GGCC	9 cut(s)	140, 389, 1218, 1415, 1695, 2303, 2517, 2953, 3028
HapII	CCGG	5 cut(s)	135, 1215, 2894, 2906, 3029
HgaI	GACGC	2 cut(s)	1194, 2616
HhaI	GCGC	1 cut(s)	298
Hin1I	GRCGYC	1 cut(s)	2036
Hin1II	CATG	7 cut(s)	711, 946, 1020, 1514, 2470, 2724, 2936
Hin6I	GCGC	1 cut(s)	296
HinP1I	GCGC	1 cut(s)	296
HincII	GTYRAC	4 cut(s)	61, 344, 714, 1039
HindII	GTYRAC	4 cut(s)	61, 344, 714, 1039
HindIII	AAGCTT	1 cut(s)	921
HpaI	GTTAAC	1 cut(s)	1039
HpaII	CCGG	5 cut(s)	135, 1215, 2894, 2906, 3029
HphI	GGTGA	7 cut(s)	109, 124, 1043, 1682, 2280, 2391, 2501
Hpy99I	CGWCG	3 cut(s)	41, 116, 2524
HpyCH4III	ACNGT	5 cut(s)	1847, 1928, 2074, 2285, 2437
HpyCH4IV	ACGT	5 cut(s)	552, 1898, 2036, 2409, 2943
HpyF3I	CTNAG	4 cut(s)	15, 1410, 2817, 2982
HpySE526I	ACGT	5 cut(s)	552, 1898, 2036, 2409, 2943
Hsp92I	GRCGYC	1 cut(s)	2036
Hsp92II	CATG	7 cut(s)	711, 946, 1020, 1514, 2470, 2724, 2936
HspAI	GCGC	1 cut(s)	296
Kpn2I	TCCGGA	1 cut(s)	2893
KspAI	GTTAAC	1 cut(s)	1039
KspI	CCGCGG	1 cut(s)	3037
Kzo9I	GATC	9 cut(s)	7, 90, 288, 347, 395, 442, 484, 1012, 1981
LguI	GCTCTTC	2 cut(s)	83, 801
LmnI	GCTCC	6 cut(s)	73, 105, 897, 1558, 1579, 2571
LweI	GCATC	5 cut(s)	250, 493, 579, 1133, 2247
MaeI	CTAG	9 cut(s)	201, 545, 1157, 1455, 1985, 2139, 2346, 2859, 2910
MaeII	ACGT	5 cut(s)	552, 1898, 2036, 2409, 2943
MaeIII	GTNAC	6 cut(s)	115, 703, 1480, 2051, 2279, 2741
MalI	GATC	9 cut(s)	9, 92, 290, 349, 397, 444, 486, 1014, 1983
MboI	GATC	9 cut(s)	7, 90, 288, 347, 395, 442, 484, 1012, 1981
MfeI	CAATTG	1 cut(s)	1199
MflI	RGATCY	3 cut(s)	7, 395, 1981
MhlI	GDGCHC	7 cut(s)	78, 102, 175, 1321, 1584, 2276, 2409
MlyI	GAGTC	7 cut(s)	50, 56, 1103, 1614, 1793, 1801, 2896
MmeI	TCCRAC	1 cut(s)	1642
Mph1103I	ATGCAT	2 cut(s)	2239, 2934
MroI	TCCGGA	1 cut(s)	2893
MslI	CAYNNNNRTG	1 cut(s)	1784
MspA1I	CMGCKG	6 cut(s)	167, 725, 1229, 1973, 2546, 3036
MspI	CCGG	5 cut(s)	135, 1215, 2894, 2906, 3029
MspR9I	CCNGG	9 cut(s)	136, 352, 1215, 1610, 1650, 2199, 2277, 2514, 2991
MunI	CAATTG	1 cut(s)	1199
MvaI	CCWGG	7 cut(s)	352, 1610, 1650, 2199, 2277, 2514, 2991
MvnI	CGCG	2 cut(s)	1716, 3036
NciI	CCSGG	2 cut(s)	136, 1215
NcoI	CCATGG	1 cut(s)	1016
NdeI	CATATG	2 cut(s)	807, 2791
NdeII	GATC	9 cut(s)	7, 90, 288, 347, 395, 442, 484, 1012, 1981
NheI	GCTAGC	1 cut(s)	2858
NlaIII	CATG	7 cut(s)	711, 946, 1020, 1514, 2470, 2724, 2936
NlaIV	GGNNCC	6 cut(s)	139, 429, 1614, 1770, 1944, 2832
NmuCI	GTSAC	2 cut(s)	115, 1480
NsiI	ATGCAT	2 cut(s)	2239, 2934
NspV	TTCGAA	1 cut(s)	2462
PagI	TCATGA	1 cut(s)	1510
PceI	AGGCCT	1 cut(s)	2953
PciSI	GCTCTTC	2 cut(s)	83, 801
PfeI	GAWTC	8 cut(s)	278, 959, 1136, 1466, 2648, 2666, 2717, 2879
PflMI	CCANNNNNTGG	3 cut(s)	160, 2693, 2792
PfoI	TCCNGGA	1 cut(s)	1648
PleI	GAGTC	7 cut(s)	49, 56, 1102, 1613, 1793, 1801, 2895
PpsI	GAGTC	7 cut(s)	49, 56, 1102, 1613, 1793, 1801, 2895
PpuMI	RGGWCCY	2 cut(s)	2798, 2831
PshBI	ATTAAT	2 cut(s)	183, 459
PsiI	TTATAA	1 cut(s)	2925
Psp124BI	GAGCTC	2 cut(s)	78, 102
Psp1406I	AACGTT	1 cut(s)	1898
Psp5II	RGGWCCY	2 cut(s)	2798, 2831
Psp6I	CCWGG	7 cut(s)	350, 1608, 1648, 2197, 2275, 2512, 2989
PspGI	CCWGG	7 cut(s)	350, 1608, 1648, 2197, 2275, 2512, 2989
PspN4I	GGNNCC	6 cut(s)	139, 429, 1614, 1770, 1944, 2832
PspPI	GGNCC	5 cut(s)	138, 2516, 2798, 2831, 3031
PspPPI	RGGWCCY	2 cut(s)	2798, 2831
PsrI	GAACNNNNNNTAC	2 cut(s)	1425, 1457
PstI	CTGCAG	1 cut(s)	1432
PstNI	CAGNNNCTG	2 cut(s)	2390, 3045
PsuI	RGATCY	3 cut(s)	7, 395, 1981
PvuII	CAGCTG	3 cut(s)	167, 725, 1973
RsaI	GTAC	5 cut(s)	1434, 1849, 2388, 2774, 2948
RsaNI	GTAC	5 cut(s)	1433, 1848, 2387, 2773, 2947
RseI	CAYNNNNRTG	1 cut(s)	1784
Rsr2I	CGGWCCG	1 cut(s)	3031
RsrII	CGGWCCG	1 cut(s)	3031
SacI	GAGCTC	2 cut(s)	78, 102
SacII	CCGCGG	1 cut(s)	3037
SalI	GTCGAC	1 cut(s)	59
SapI	GCTCTTC	2 cut(s)	83, 801
Sau3AI	GATC	9 cut(s)	7, 90, 288, 347, 395, 442, 484, 1012, 1981
Sau96I	GGNCC	5 cut(s)	138, 2516, 2798, 2831, 3031
ScaI	AGTACT	1 cut(s)	2774
SchI	GAGTC	7 cut(s)	50, 56, 1103, 1614, 1793, 1801, 2896
ScrFI	CCNGG	9 cut(s)	136, 352, 1215, 1610, 1650, 2199, 2277, 2514, 2991
SduI	GDGCHC	7 cut(s)	78, 102, 175, 1321, 1584, 2276, 2409
SfaNI	GCATC	5 cut(s)	250, 493, 579, 1133, 2247
SfcI	CTRYAG	2 cut(s)	1002, 1428
Sfr303I	CCGCGG	1 cut(s)	3037
SfuI	TTCGAA	1 cut(s)	2462
SgrBI	CCGCGG	1 cut(s)	3037
SinI	GGWCC	3 cut(s)	2798, 2831, 3031
SmiI	ATTTAAAT	1 cut(s)	2127
SmiMI	CAYNNNNRTG	1 cut(s)	1784
SmlI	CTYRAG	1 cut(s)	1914
SmoI	CTYRAG	1 cut(s)	1914
SpeI	ACTAGT	1 cut(s)	2345
SseBI	AGGCCT	1 cut(s)	2953
SspI	AATATT	2 cut(s)	187, 577
SspMI	CTAG	9 cut(s)	201, 545, 1157, 1455, 1985, 2139, 2346, 2859, 2910
SstI	GAGCTC	2 cut(s)	78, 102
StuI	AGGCCT	1 cut(s)	2953
StyD4I	CCNGG	9 cut(s)	134, 350, 1213, 1608, 1648, 2197, 2275, 2512, 2989
StyI	CCWWGG	3 cut(s)	1016, 1156, 1772
SwaI	ATTTAAAT	1 cut(s)	2127
TaaI	ACNGT	5 cut(s)	1847, 1928, 2074, 2285, 2437
TaiI	ACGT	5 cut(s)	555, 1901, 2039, 2412, 2946
TaqI	TCGA	8 cut(s)	39, 60, 93, 866, 1873, 2255, 2462, 2966
TatI	WGTACW	3 cut(s)	1847, 2772, 2946
TauI	GCSGC	5 cut(s)	1834, 1948, 2303, 2617, 3039
TfiI	GAWTC	8 cut(s)	278, 959, 1136, 1466, 2648, 2666, 2717, 2879
TscAI	CASTG	6 cut(s)	298, 1113, 1846, 1933, 2068, 2628
TseFI	GTSAC	2 cut(s)	115, 1480
Tsp45I	GTSAC	2 cut(s)	115, 1480
TspGWI	ACGGA	5 cut(s)	25, 232, 416, 477, 1583
TspRI	CASTG	6 cut(s)	298, 1113, 1846, 1933, 2068, 2628
Van91I	CCANNNNNTGG	3 cut(s)	160, 2693, 2792
VpaK11BI	GGWCC	3 cut(s)	2798, 2831, 3031
VspI	ATTAAT	2 cut(s)	183, 459
XagI	CCTNNNNNAGG	2 cut(s)	1914, 2841
XapI	RAATTY	3 cut(s)	31, 652, 1021
XbaI	TCTAGA	1 cut(s)	1984
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2311
XmaJI	CCTAGG	1 cut(s)	1156
XmiI	GTMKAC	1 cut(s)	60
XspI	CTAG	9 cut(s)	201, 545, 1157, 1455, 1985, 2139, 2346, 2859, 2910
ZraI	GACGTC	1 cut(s)	2037
ZrmI	AGTACT	1 cut(s)	2774
Zsp2I	ATGCAT	2 cut(s)	2239, 2934

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.