Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009604

Physical Location & Seq

Genomic Coordinates Reverse (-)

55919226 .. 55926919

Gene Structure 7694 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ26306

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3069 bp

ATGGAGGATCTCTCTGAGCTAAAGATTGGGAATTCCGTCGAGTCCTTCCACAAGTTCGTCGACTCGCAGAGGGAGCTCTTCCACCGCCAGATCGATGAGCTCCAGAAAATCGTCGTCACCCAATGCAAGCTCACCGGCGCCAATCCTCTCTCCCAAGAGATGGCAGCTGGTGCTCTTTCTATTAATATTGGAAAAAGACCTAGAGATTTGTTAAATCCAAAGGCTATCAAGTATATGCAATCCGTTTTTTCTATTAAAGATGCGATTACGAAGAAGGAATCTCGGGAGATCAGTGCGCTGTTCGGGGTTTCTGTCTCACAGGTTCGTGATTTTTTTAATAGTCAACGATCCAGAGTTAGAAAAATAGTTCAGTTGTCAAGGGAGAAGGCCATCAGATCCACTGAACATAAAGAATTGCTGGAGGGGGTGCCGACAATCTCTGATCCATTGATGCCGACAAGCTCTGATCCATTGATACCAATTAATCCCCTTCCTTTAAACACTATTGATCCGTCCAATGTTGAGGATGCACCATCTTGCTCAACACAAGATGATACTCTTTCTGGACTAGATGACGTTGATAAACATTTTGTTGAAAATATTTTCAACTTGATGCGGAAAGAAGAAACATTTTCTGGGCAAGTGAAAGTGTTAGAGTTGATATTGCGGATACAAAATTCTTCAGTATTATGCTGGTTTTTAACTAAAGGTGGCGTGATGATTTTAGTAACATGGTTGACACAAGCAGCTGATGAAGAACAAACGAGTGTTCTGCTTATCATCTTAAAGGTTCTTTGCCATTTGCCTCTATCCAAAGCTCTTCCTGTTCATATGTCAGCCATACTGCAAAGTGTTAATAGACTGCGGTTTTACAGGACACCAGAAATATCGAACAGGGCAAGGGTTTTGTTATCAAGATGGAGCAAGTCTTTAGCAAGAAGCCAGGCTTTGAAGAAACCAAATGGCATGAAAACATCTAATGATTCACAAGAATTAGCATTGCTGAAGCGAAGTATTGATGAAGCTATAGGCGATGATCCATGGAATTCAAATGGTGATGTTAACGAAGACATCCTTGCATTGCCGTTTGAAAGTGCAGATAAATTAAGGAAATTGGAGTCTTCAGAACCAGTGAAGCTATTGACAGCATCATCAGATGATTCTAATAAGAAACACATCCTAGGTGTATCTTCATCCCAATTTAGAGGACGCAGAAAAGTTCAATTGGTGGAACAGCCCGGCCAAAAAACAGCGGGGAGAAGTTCACAGGTTGCAAAAACAACACCTGTCAGTCAGGCTCGCCCAATGTCTGTTGATGATATCCAAAAAGCAAAATTGCGAGCACAATATATGCAGAGCAAGTATGGAAAGTCTGCTTCCTCTAATGAAAATAAAGAAGTGAAGGCTGAAGGCGTGAACATACCTCCAATCGCTCAGGCCAGCATTTTACCTGTAGTACCTAATGTTCCAGTTCAGTCTAGTATTGAGGAATCCAAGAAACCTGTGACACTTCCTTTGAAAGAGAGGGAAACTCTTGATATAAGTTTACAGCCTATTGGGAGTTTCCAGACTATTGCTCCAAAGCTGAAAACGGATATGAAGGAGCACATCTGGGAGAAGTGCAGGAGAGTCCAGGTGCCGTGGAAGACACCACCAGAAATAAAACTTAATCCAGGATGGAGGGTTGGAGGTGGTGAGAATGGCAAAGAAATGGAAGTCCAGAAAAACAGAAACCACCGCGAGCAGGAAACTATCTACAAGACATTCAAGGAGATACCACCTAACCCGAAGGAACCTTGGGACATTGAAATGGACTATGATGACTCATTGACTCCAGTAATACCAACAGAACAGCCACCTGACACTGACTGTACTGAAACACAACCTTCCCATAGTCGAGAAGTAAATAATGCAGCAGAAACGTTGGTTGTTCCTTCTCAAGGAGTAAACAGTGTTGTTTCTATGGTGCCGCTAACTAATATGGCAAGCAGCACAGCTGAACCAGATCTAGAGCTGCTCGCTGTGCTGCTAAAAAATCCAGAATTGGTGTTTGCCTTGACATCTGGGCAGGCTGGTAACTTGTCCAGTGAGGATACAGTAAAATTGCTGGATATGATTAAGGCTGGTGGGGCTGGTTTCGCTGGTAATTTAAATGGGTTAGCTAGTAAAATGGAGGAGAAGGTTGAAGTTTCTCTTCCATCCCCAACACCTTCAAGCAACCCTGGAACGAGTGGATGGAGACCAGAAGCTACAAGAAATGCATTTTCCCAACAAAACTCGATGCAGAACAGAGTGAGCCCTGGTTACGGTTCACCAGCAATGGCGGCCAACAGCAACTTGGTGCTTTCACAACTTCCATCTGCTCTTACTAGTCCTCTACTGCCGCGATTATCGGCTGCCCAACAAGCAGTACCTGCATACTCACCAGAACACGTCCATCAATTTCCCCATACTACAACCGTATCACACTTGCAGCATAACTATTCGAACATGGCTGTTCCTTCTGTTTGGGGTGAAAGCACAAGTAATGGCAAACCAGGCCCGTCGTATAACTCATATAATGTAGCACCGGAAAGGCAACCCAACTCGCTTCCACCGCCCTTCTCATCCAATCTGACACACCAACAAAGACGCCCGCCGCAACCACTGCAACAACAAACCCATTACTCCGATTCTCCCCATTACTCTGAGTCGCCCTATTTCTCTAAACCACCAACTGGGAAACCAGTCCCTCTGTCTGATTCATGGAGAGCTGGTAGGCAGGGTAACTATCATTATTTAGAGAACCAAAATCAGTACTACAATGCACCATCATATGGAGGATTGCAGCAGCAACCTCAGTTGAGGTCGGGTCCTCCTTATGAAGGAAATGAATATGCGAGCAATGGAGGAGGTTTTGAATCGTGGAGTCCTCCAGAGGATAGTCCGGCTAGAAATGCCGATTATAATATGCATGGAAGAAACGCGTACAGGCCTACTGACAGGTCGAGGCAAAGGAATACTCAGACCCCTGGATACCGAGATTATAGTAGGCAGGGACACAGGTGGCCGGACCGCGGCAGACACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009791 GO:0009889 GO:0010228 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

1022

Amino Acids

113.46

Weight (kDa)

8.5

Isoelectric Point (pI)

60.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009604)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02560 AT4G02560
fragaria_vesca	FvH4_2g25100 FvH4_2g25100 FvH4_2g25100
malus_domestica	MD03G1284300.v1.1 MD11G1302000.v1.1
prunus_persica	Prupe.8G255600_v2.0.a1 Prupe.8G255600_v2.0.a1
pyrus_communis	pycom03g22510 pycom11g26460
rosa_chinensis	RchiOBHm_Chr6g0293161
rosa_laevigata	RLG00000011970
rosa_multiflora	Rmu_sc0014786.1_g000002
rosa_roxburghii	Rroxscaffold_7G00174400
rosa_rugosa	Rorug06G0233000 Rorug06G0233100
rosa_samantha	Rh6AG345700 Rh6BG353500 Rh6CG359900 Rh6DG346300
rosa_wichuraiana	Rw6G030130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2946
Acc36I	ACCTGC	1 cut(s)	2422
AccB1I	GGYRCC	4 cut(s)	137, 427, 1636, 1966
AccB7I	CCANNNNNTGG	3 cut(s)	160, 2717, 2816
AccI	GTMKAC	1 cut(s)	60
AccII	CGCG	4 cut(s)	1740, 2386, 2966, 3057
AclI	AACGTT	1 cut(s)	1922
AclWI	GGATC	7 cut(s)	15, 342, 390, 437, 461, 503, 1031
AcoI	YGGCCR	3 cut(s)	1240, 2325, 3047
AcsI	RAATTY	3 cut(s)	31, 676, 1045
AcuI	CTGAAG	4 cut(s)	666, 1025, 1107, 1428
AcyI	GRCGYC	2 cut(s)	138, 2632
AfaI	GTAC	5 cut(s)	1458, 1873, 2412, 2798, 2969
AfiI	CCNNNNNNNGG	8 cut(s)	160, 1744, 1940, 2306, 2717, 2816, 2864, 3056
AflIII	ACRYGT	2 cut(s)	2431, 2964
AhlI	ACTAGT	1 cut(s)	2369
AjiI	CACGTC	1 cut(s)	2434
AjnI	CCWGG	7 cut(s)	942, 1632, 1672, 2221, 2299, 2536, 3010
Alw21I	GWGCWC	5 cut(s)	78, 102, 175, 1345, 1608
Alw26I	GTCTC	2 cut(s)	319, 2233
AlwI	GGATC	7 cut(s)	15, 342, 390, 437, 461, 503, 1031
AlwNI	CAGNNNCTG	2 cut(s)	2414, 3066
Ama87I	CYCGRG	1 cut(s)	282
AoxI	GGCC	7 cut(s)	387, 1240, 1437, 2325, 2539, 2972, 3047
ApoI	RAATTY	3 cut(s)	31, 676, 1045
ArsI	GACNNNNNNTTYG	2 cut(s)	1498, 1530
AseI	ATTAAT	2 cut(s)	183, 483
AspA2I	CCTAGG	1 cut(s)	1180
AspLEI	GCGC	2 cut(s)	140, 298
AspS9I	GGNCC	3 cut(s)	2540, 2852, 3052
AsuC2I	CCSGG	1 cut(s)	1239
AsuHPI	GGTGA	7 cut(s)	109, 124, 1067, 1706, 2304, 2415, 2525
AsuII	TTCGAA	1 cut(s)	2486
AvaI	CYCGRG	1 cut(s)	282
AvaII	GGWCC	2 cut(s)	2852, 3052
AvrII	CCTAGG	1 cut(s)	1180
BaeI	ACNNNNGTAYC	2 cut(s)	2445, 2478
BanI	GGYRCC	4 cut(s)	137, 427, 1636, 1966
BanII	GRGCYC	3 cut(s)	78, 102, 2300
BbsI	GAAGAC	3 cut(s)	1074, 1113, 1652
Bbv12I	GWGCWC	5 cut(s)	78, 102, 175, 1345, 1608
BceAI	ACGGC	2 cut(s)	1069, 1624
BcgI	CGANNNNNNTGC	2 cut(s)	754, 788
BciT130I	CCWGG	7 cut(s)	944, 1634, 1674, 2223, 2301, 2538, 3012
BciVI	GTATCC	3 cut(s)	663, 2086, 3008
BcnI	CCSGG	1 cut(s)	1239
BcoDI	GTCTC	2 cut(s)	319, 2233
BcuI	ACTAGT	1 cut(s)	2369
BfaI	CTAG	8 cut(s)	201, 569, 1181, 1479, 2009, 2163, 2370, 2931
BfmI	CTRYAG	2 cut(s)	1026, 1452
BfoI	RGCGCY	1 cut(s)	141
BfuAI	ACCTGC	1 cut(s)	2422
BfuI	GTATCC	3 cut(s)	663, 2086, 3008
BglII	AGATCT	1 cut(s)	2005
BlnI	CCTAGG	1 cut(s)	1180
BmcAI	AGTACT	1 cut(s)	2798
Bme1390I	CCNGG	8 cut(s)	944, 1239, 1634, 1674, 2223, 2301, 2538, 3012
Bme18I	GGWCC	2 cut(s)	2852, 3052
BmeT110I	CYCGRG	1 cut(s)	282
BmgBI	CACGTC	1 cut(s)	2434
BmgT120I	GGNCC	3 cut(s)	2540, 2852, 3052
BmiI	GGNNCC	6 cut(s)	139, 429, 1638, 1794, 1968, 2853
BmrFI	CCNGG	8 cut(s)	944, 1239, 1634, 1674, 2223, 2301, 2538, 3012
BmrI	ACTGGG	1 cut(s)	2727
BmsI	GCATC	6 cut(s)	250, 441, 517, 603, 1157, 2271
BmuI	ACTGGG	1 cut(s)	2727
BpiI	GAAGAC	3 cut(s)	1074, 1113, 1652
BplI	GAGNNNNNCTC	3 cut(s)	28, 1516, 1548
BpmI	CTGGAG	4 cut(s)	86, 440, 1818, 2898
Bpu10I	CCTNAGC	1 cut(s)	1434
Bpu14I	TTCGAA	1 cut(s)	2486
BpuEI	CTTGAG	1 cut(s)	1923
BpuMI	CCSGG	1 cut(s)	1239
Bsa29I	ATCGAT	1 cut(s)	93
BsaHI	GRCGYC	2 cut(s)	138, 2632
BsaI	GGTCTC	1 cut(s)	2233
BsaJI	CCNNGG	8 cut(s)	1040, 1180, 1640, 1796, 2221, 2299, 3010, 3055
BsaWI	WCCGGW	1 cut(s)	2569
BsaXI	ACNNNNNCTCC	4 cut(s)	1561, 1591, 2740, 2770
Bsc4I	CCNNNNNNNGG	8 cut(s)	160, 1744, 1940, 2306, 2717, 2816, 2864, 3056
Bse118I	RCCGGY	1 cut(s)	134
Bse1I	ACTGG	6 cut(s)	1130, 1469, 1835, 2085, 2722, 2726
Bse3DI	GCAATG	4 cut(s)	998, 1079, 2325, 2890
BseBI	CCWGG	7 cut(s)	944, 1634, 1674, 2223, 2301, 2538, 3012
BseCI	ATCGAT	1 cut(s)	93
BseDI	CCNNGG	8 cut(s)	1040, 1180, 1640, 1796, 2221, 2299, 3010, 3055
BseGI	GGATG	8 cut(s)	532, 1071, 1176, 1193, 1682, 2198, 2240, 2606
BseLI	CCNNNNNNNGG	8 cut(s)	160, 1744, 1940, 2306, 2717, 2816, 2864, 3056
BseMI	GCAATG	4 cut(s)	998, 1079, 2325, 2890
BseMII	CTCAG	5 cut(s)	6, 1448, 2679, 2852, 3017
BseNI	ACTGG	6 cut(s)	1130, 1469, 1835, 2085, 2722, 2726
BseRI	GAGGAG	2 cut(s)	2189, 2904
BsgI	GTGCAG	2 cut(s)	1116, 1642
Bsh1236I	CGCG	4 cut(s)	1740, 2386, 2966, 3057
BshFI	GGCC	7 cut(s)	389, 1242, 1439, 2327, 2541, 2974, 3049
BshNI	GGYRCC	4 cut(s)	137, 427, 1636, 1966
BshVI	ATCGAT	1 cut(s)	93
BsiHKAI	GWGCWC	5 cut(s)	78, 102, 175, 1345, 1608
BsiHKCI	CYCGRG	1 cut(s)	282
BsiSI	CCGG	5 cut(s)	135, 1239, 2570, 2927, 3050
BslFI	GGGAC	3 cut(s)	1814, 2714, 3051
BslI	CCNNNNNNNGG	8 cut(s)	160, 1744, 1940, 2306, 2717, 2816, 2864, 3056
BsmAI	GTCTC	2 cut(s)	319, 2233
BsmFI	GGGAC	3 cut(s)	1814, 2714, 3051
BsnI	GGCC	7 cut(s)	389, 1242, 1439, 2327, 2541, 2974, 3049
Bso31I	GGTCTC	1 cut(s)	2233
BsoBI	CYCGRG	1 cut(s)	282
Bsp119I	TTCGAA	1 cut(s)	2486
Bsp1286I	GDGCHC	6 cut(s)	78, 102, 175, 1345, 1608, 2300
Bsp19I	CCATGG	1 cut(s)	1040
BspANI	GGCC	7 cut(s)	389, 1242, 1439, 2327, 2541, 2974, 3049
BspCNI	CTCAG	5 cut(s)	7, 1447, 2680, 2851, 3016
BspDI	ATCGAT	1 cut(s)	93
BspFNI	CGCG	4 cut(s)	1740, 2386, 2966, 3057
BspLI	GGNNCC	6 cut(s)	139, 429, 1638, 1794, 1968, 2853
BspMI	ACCTGC	1 cut(s)	2422
BspPI	GGATC	7 cut(s)	15, 342, 390, 437, 461, 503, 1031
BspQI	GCTCTTC	2 cut(s)	83, 825
BspT104I	TTCGAA	1 cut(s)	2486
BspT107I	GGYRCC	4 cut(s)	137, 427, 1636, 1966
BspTNI	GGTCTC	1 cut(s)	2233
BsrDI	GCAATG	4 cut(s)	998, 1079, 2325, 2890
BsrFI	RCCGGY	1 cut(s)	134
BsrI	ACTGG	6 cut(s)	1130, 1469, 1835, 2085, 2722, 2726
BssAI	RCCGGY	1 cut(s)	134
BssECI	CCNNGG	8 cut(s)	1040, 1180, 1640, 1796, 2221, 2299, 3010, 3055
BssNI	GRCGYC	2 cut(s)	138, 2632
BssT1I	CCWWGG	3 cut(s)	1040, 1180, 1796
Bst2UI	CCWGG	7 cut(s)	944, 1634, 1674, 2223, 2301, 2538, 3012
Bst4CI	ACNGT	5 cut(s)	1871, 1952, 2098, 2309, 2461
Bst6I	CTCTTC	3 cut(s)	83, 825, 2199
BstACI	GRCGYC	2 cut(s)	138, 2632
BstAPI	GCANNNNNTGC	3 cut(s)	170, 2414, 2647
BstBI	TTCGAA	1 cut(s)	2486
BstDEI	CTNAG	5 cut(s)	15, 1434, 2688, 2838, 3003
BstDSI	CCRYGG	3 cut(s)	1040, 1640, 3055
BstENI	CCTNNNNNAGG	2 cut(s)	1938, 2862
BstF5I	GGATG	8 cut(s)	532, 1071, 1176, 1193, 1682, 2198, 2240, 2606
BstFNI	CGCG	4 cut(s)	1740, 2386, 2966, 3057
BstH2I	RGCGCY	1 cut(s)	141
BstHHI	GCGC	2 cut(s)	140, 298
BstMAI	GTCTC	2 cut(s)	319, 2233
BstNI	CCWGG	7 cut(s)	944, 1634, 1674, 2223, 2301, 2538, 3012
BstSCI	CCNGG	8 cut(s)	942, 1237, 1632, 1672, 2221, 2299, 2536, 3010
BstSFI	CTRYAG	2 cut(s)	1026, 1452
BstUI	CGCG	4 cut(s)	1740, 2386, 2966, 3057
BstV2I	GAAGAC	3 cut(s)	1074, 1113, 1652
BstX2I	RGATCY	3 cut(s)	7, 395, 2005
BstYI	RGATCY	3 cut(s)	7, 395, 2005
Bsu15I	ATCGAT	1 cut(s)	93
BsuI	GTATCC	3 cut(s)	663, 2086, 3008
BsuRI	GGCC	7 cut(s)	389, 1242, 1439, 2327, 2541, 2974, 3049
BsuTUI	ATCGAT	1 cut(s)	93
BtgI	CCRYGG	3 cut(s)	1040, 1640, 3055
BtgZI	GCGATG	1 cut(s)	1047
BtrI	CACGTC	1 cut(s)	2434
BtsCI	GGATG	8 cut(s)	532, 1071, 1176, 1193, 1682, 2198, 2240, 2606
BtsI	GCAGTG	1 cut(s)	2645
BtsIMutI	CAGTG	8 cut(s)	298, 399, 1137, 1863, 1957, 2092, 2645, 3064
BveI	ACCTGC	1 cut(s)	2422
CaiI	CAGNNNCTG	2 cut(s)	2414, 3066
CfoI	GCGC	2 cut(s)	140, 298
Cfr10I	RCCGGY	1 cut(s)	134
Cfr13I	GGNCC	3 cut(s)	2540, 2852, 3052
Cfr42I	CCGCGG	1 cut(s)	3058
ClaI	ATCGAT	1 cut(s)	93
CpoI	CGGWCCG	1 cut(s)	3052
CseI	GACGC	2 cut(s)	1218, 2640
Csp6I	GTAC	5 cut(s)	1457, 1872, 2411, 2797, 2968
CspI	CGGWCCG	1 cut(s)	3052
CviAII	CATG	6 cut(s)	732, 967, 1041, 2491, 2745, 2954
CviQI	GTAC	5 cut(s)	1457, 1872, 2411, 2797, 2968
DdeI	CTNAG	5 cut(s)	15, 1434, 2688, 2838, 3003
DinI	GGCGCC	1 cut(s)	139
DraI	TTTAAA	2 cut(s)	498, 2151
EaeI	YGGCCR	3 cut(s)	1240, 2325, 3047
Eam1104I	CTCTTC	3 cut(s)	83, 825, 2199
EarI	CTCTTC	3 cut(s)	83, 825, 2199
Ecl136II	GAGCTC	2 cut(s)	76, 100
Eco130I	CCWWGG	3 cut(s)	1040, 1180, 1796
Eco147I	AGGCCT	1 cut(s)	2974
Eco24I	GRGCYC	3 cut(s)	78, 102, 2300
Eco31I	GGTCTC	1 cut(s)	2233
Eco32I	GATATC	1 cut(s)	1321
Eco47I	GGWCC	2 cut(s)	2852, 3052
Eco53kI	GAGCTC	2 cut(s)	76, 100
Eco57I	CTGAAG	4 cut(s)	666, 1025, 1107, 1428
Eco88I	CYCGRG	1 cut(s)	282
EcoICRI	GAGCTC	2 cut(s)	76, 100
EcoNI	CCTNNNNNAGG	2 cut(s)	1938, 2862
EcoO109I	RGGNCCY	1 cut(s)	2852
EcoRI	GAATTC	2 cut(s)	31, 1045
EcoRII	CCWGG	7 cut(s)	942, 1632, 1672, 2221, 2299, 2536, 3010
EcoRV	GATATC	1 cut(s)	1321
EcoT14I	CCWWGG	3 cut(s)	1040, 1180, 1796
EcoT22I	ATGCAT	2 cut(s)	2263, 2955
EcoT38I	GRGCYC	3 cut(s)	78, 102, 2300
EgeI	GGCGCC	1 cut(s)	139
EheI	GGCGCC	1 cut(s)	139
ErhI	CCWWGG	3 cut(s)	1040, 1180, 1796
FaeI	CATG	6 cut(s)	735, 970, 1044, 2494, 2748, 2957
FalI	AAGNNNNNCTT	6 cut(s)	931, 963, 1059, 1091, 2178, 2210
FaqI	GGGAC	3 cut(s)	1814, 2714, 3051
FatI	CATG	6 cut(s)	731, 966, 1040, 2490, 2744, 2953
FauI	CCCGC	2 cut(s)	1246, 2643
FauNDI	CATATG	2 cut(s)	831, 2815
FblI	GTMKAC	1 cut(s)	60
FokI	GGATG	8 cut(s)	539, 1058, 1163, 1180, 1689, 2185, 2247, 2593
FriOI	GRGCYC	3 cut(s)	78, 102, 2300
FspBI	CTAG	8 cut(s)	201, 569, 1181, 1479, 2009, 2163, 2370, 2931
GlaI	GCGC	2 cut(s)	139, 297
GsuI	CTGGAG	4 cut(s)	86, 440, 1818, 2898
HaeII	RGCGCY	1 cut(s)	141
HaeIII	GGCC	7 cut(s)	389, 1242, 1439, 2327, 2541, 2974, 3049
HapII	CCGG	5 cut(s)	135, 1239, 2570, 2927, 3050
HgaI	GACGC	2 cut(s)	1218, 2640
HhaI	GCGC	2 cut(s)	140, 298
Hin1I	GRCGYC	2 cut(s)	138, 2632
Hin1II	CATG	6 cut(s)	735, 970, 1044, 2494, 2748, 2957
Hin6I	GCGC	2 cut(s)	138, 296
HinP1I	GCGC	2 cut(s)	138, 296
HincII	GTYRAC	4 cut(s)	61, 344, 738, 1063
HindII	GTYRAC	4 cut(s)	61, 344, 738, 1063
HpaI	GTTAAC	1 cut(s)	1063
HpaII	CCGG	5 cut(s)	135, 1239, 2570, 2927, 3050
HphI	GGTGA	7 cut(s)	109, 124, 1067, 1706, 2304, 2415, 2525
Hpy166II	GTNNAC	9 cut(s)	61, 344, 738, 1063, 1265, 1417, 1547, 1948, 2312
Hpy8I	GTNNAC	9 cut(s)	61, 344, 738, 1063, 1265, 1417, 1547, 1948, 2312
Hpy99I	CGWCG	4 cut(s)	41, 62, 116, 2548
HpyCH4III	ACNGT	5 cut(s)	1871, 1952, 2098, 2309, 2461
HpyCH4IV	ACGT	3 cut(s)	576, 1922, 2433
HpyF3I	CTNAG	5 cut(s)	15, 1434, 2688, 2838, 3003
HpySE526I	ACGT	3 cut(s)	576, 1922, 2433
Hsp92I	GRCGYC	2 cut(s)	138, 2632
Hsp92II	CATG	6 cut(s)	735, 970, 1044, 2494, 2748, 2957
HspAI	GCGC	2 cut(s)	138, 296
KasI	GGCGCC	1 cut(s)	137
KspAI	GTTAAC	1 cut(s)	1063
KspI	CCGCGG	1 cut(s)	3058
LguI	GCTCTTC	2 cut(s)	83, 825
LmnI	GCTCC	5 cut(s)	73, 105, 921, 1582, 1603
LweI	GCATC	6 cut(s)	250, 441, 517, 603, 1157, 2271
MaeI	CTAG	8 cut(s)	201, 569, 1181, 1479, 2009, 2163, 2370, 2931
MaeII	ACGT	3 cut(s)	576, 1922, 2433
MaeIII	GTNAC	6 cut(s)	115, 727, 1504, 2075, 2303, 2765
MfeI	CAATTG	1 cut(s)	1223
MflI	RGATCY	3 cut(s)	7, 395, 2005
MhlI	GDGCHC	6 cut(s)	78, 102, 175, 1345, 1608, 2300
MluI	ACGCGT	1 cut(s)	2964
Mly113I	GGCGCC	1 cut(s)	138
MlyI	GAGTC	8 cut(s)	50, 56, 1127, 1638, 1817, 1825, 2699, 2917
MmeI	TCCRAC	1 cut(s)	1666
Mph1103I	ATGCAT	2 cut(s)	2263, 2955
MslI	CAYNNNNRTG	1 cut(s)	1808
MspA1I	CMGCKG	5 cut(s)	167, 749, 1253, 1997, 3057
MspI	CCGG	5 cut(s)	135, 1239, 2570, 2927, 3050
MspR9I	CCNGG	8 cut(s)	944, 1239, 1634, 1674, 2223, 2301, 2538, 3012
MunI	CAATTG	1 cut(s)	1223
MvaI	CCWGG	7 cut(s)	944, 1634, 1674, 2223, 2301, 2538, 3012
MvnI	CGCG	4 cut(s)	1740, 2386, 2966, 3057
NarI	GGCGCC	1 cut(s)	138
NciI	CCSGG	1 cut(s)	1239
NcoI	CCATGG	1 cut(s)	1040
NdeI	CATATG	2 cut(s)	831, 2815
NlaIII	CATG	6 cut(s)	735, 970, 1044, 2494, 2748, 2957
NlaIV	GGNNCC	6 cut(s)	139, 429, 1638, 1794, 1968, 2853
NmuCI	GTSAC	2 cut(s)	115, 1504
NsiI	ATGCAT	2 cut(s)	2263, 2955
NspV	TTCGAA	1 cut(s)	2486
PceI	AGGCCT	1 cut(s)	2974
PciSI	GCTCTTC	2 cut(s)	83, 825
PfeI	GAWTC	7 cut(s)	278, 983, 1160, 1490, 2672, 2741, 2900
PflMI	CCANNNNNTGG	3 cut(s)	160, 2717, 2816
PfoI	TCCNGGA	1 cut(s)	1672
PleI	GAGTC	8 cut(s)	49, 56, 1126, 1637, 1817, 1825, 2698, 2916
PluTI	GGCGCC	1 cut(s)	141
PpsI	GAGTC	8 cut(s)	49, 56, 1126, 1637, 1817, 1825, 2698, 2916
PpuMI	RGGWCCY	1 cut(s)	2852
PshBI	ATTAAT	2 cut(s)	183, 483
PsiI	TTATAA	1 cut(s)	2946
Psp124BI	GAGCTC	2 cut(s)	78, 102
Psp1406I	AACGTT	1 cut(s)	1922
Psp5II	RGGWCCY	1 cut(s)	2852
Psp6I	CCWGG	7 cut(s)	942, 1632, 1672, 2221, 2299, 2536, 3010
PspGI	CCWGG	7 cut(s)	942, 1632, 1672, 2221, 2299, 2536, 3010
PspN4I	GGNNCC	6 cut(s)	139, 429, 1638, 1794, 1968, 2853
PspPI	GGNCC	3 cut(s)	2540, 2852, 3052
PspPPI	RGGWCCY	1 cut(s)	2852
PsrI	GAACNNNNNNTAC	2 cut(s)	1449, 1481
PstNI	CAGNNNCTG	2 cut(s)	2414, 3066
PsuI	RGATCY	3 cut(s)	7, 395, 2005
PvuII	CAGCTG	3 cut(s)	167, 749, 1997
RsaI	GTAC	5 cut(s)	1458, 1873, 2412, 2798, 2969
RsaNI	GTAC	5 cut(s)	1457, 1872, 2411, 2797, 2968
RseI	CAYNNNNRTG	1 cut(s)	1808
Rsr2I	CGGWCCG	1 cut(s)	3052
RsrII	CGGWCCG	1 cut(s)	3052
SacI	GAGCTC	2 cut(s)	78, 102
SacII	CCGCGG	1 cut(s)	3058
SalI	GTCGAC	1 cut(s)	59
SapI	GCTCTTC	2 cut(s)	83, 825
Sau96I	GGNCC	3 cut(s)	2540, 2852, 3052
ScaI	AGTACT	1 cut(s)	2798
SchI	GAGTC	8 cut(s)	50, 56, 1127, 1638, 1817, 1825, 2699, 2917
ScrFI	CCNGG	8 cut(s)	944, 1239, 1634, 1674, 2223, 2301, 2538, 3012
SduI	GDGCHC	6 cut(s)	78, 102, 175, 1345, 1608, 2300
SfaNI	GCATC	6 cut(s)	250, 441, 517, 603, 1157, 2271
SfcI	CTRYAG	2 cut(s)	1026, 1452
SfoI	GGCGCC	1 cut(s)	139
Sfr303I	CCGCGG	1 cut(s)	3058
SfuI	TTCGAA	1 cut(s)	2486
SgrAI	CRCCGGYG	1 cut(s)	134
SgrBI	CCGCGG	1 cut(s)	3058
SinI	GGWCC	2 cut(s)	2852, 3052
SmiI	ATTTAAAT	1 cut(s)	2151
SmiMI	CAYNNNNRTG	1 cut(s)	1808
SmlI	CTYRAG	1 cut(s)	1938
SmoI	CTYRAG	1 cut(s)	1938
SpeI	ACTAGT	1 cut(s)	2369
SseBI	AGGCCT	1 cut(s)	2974
SspDI	GGCGCC	1 cut(s)	137
SspI	AATATT	2 cut(s)	187, 601
SspMI	CTAG	8 cut(s)	201, 569, 1181, 1479, 2009, 2163, 2370, 2931
SstI	GAGCTC	2 cut(s)	78, 102
StuI	AGGCCT	1 cut(s)	2974
StyD4I	CCNGG	8 cut(s)	942, 1237, 1632, 1672, 2221, 2299, 2536, 3010
StyI	CCWWGG	3 cut(s)	1040, 1180, 1796
SwaI	ATTTAAAT	1 cut(s)	2151
TaaI	ACNGT	5 cut(s)	1871, 1952, 2098, 2309, 2461
TaiI	ACGT	3 cut(s)	579, 1925, 2436
TaqI	TCGA	8 cut(s)	39, 60, 93, 890, 1897, 2279, 2486, 2987
TatI	WGTACW	2 cut(s)	1871, 2796
TauI	GCSGC	5 cut(s)	1972, 2327, 2386, 2641, 3060
TfiI	GAWTC	7 cut(s)	278, 983, 1160, 1490, 2672, 2741, 2900
TscAI	CASTG	7 cut(s)	298, 406, 1137, 1870, 1957, 2092, 2652
TseFI	GTSAC	2 cut(s)	115, 1504
Tsp45I	GTSAC	2 cut(s)	115, 1504
TspGWI	ACGGA	4 cut(s)	25, 232, 501, 1607
TspRI	CASTG	7 cut(s)	298, 406, 1137, 1870, 1957, 2092, 2652
Van91I	CCANNNNNTGG	3 cut(s)	160, 2717, 2816
VpaK11BI	GGWCC	2 cut(s)	2852, 3052
VspI	ATTAAT	2 cut(s)	183, 483
XagI	CCTNNNNNAGG	2 cut(s)	1938, 2862
XapI	RAATTY	3 cut(s)	31, 676, 1045
XbaI	TCTAGA	1 cut(s)	2008
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2335
XmaJI	CCTAGG	1 cut(s)	1180
XmiI	GTMKAC	1 cut(s)	60
XspI	CTAG	8 cut(s)	201, 569, 1181, 1479, 2009, 2163, 2370, 2931
ZrmI	AGTACT	1 cut(s)	2798
Zsp2I	ATGCAT	2 cut(s)	2263, 2955

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.