Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0009604

Physical Location & Seq

Genomic Coordinates Forward (+)

41760400 .. 41767345

Gene Structure 6946 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1302000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2955 bp

ATGGAGGATCCGTCGGCGGAGATGGAGATTGGGACCTCCCCGGAGTCGTTCGGGAAGTTCTTGGACTCGCAGAGGGAGCTTTTCCACAGCCAGATCGATCAGCTCCAGAGAATCGTCGGCACCCAATGCAAACTCACCGGTGTCAATCCTCTCTCCCAAGAGATGGCAGCTGGTGCTCTTTCAATTAAGATTGATGGTCCAATTGCAGGAAAAAGACCTAGGGATTTGTTAAATCCAAAGGCTATAAAGTATATGCAATCTGTTTTTTCGATTAAAGATTCGATTAGTAAGAAGGAATCTCGGGAGCTCAATGCTCTATTCGGCATTACAGTCACACAGGTTCGTGATTTCTTTAACAGTCAACGGTCGAGAGTTAGAAAACTAGTACAGTTGTCAAGGGAAAAGGCCTTGAAATCTGGTGAACATAAAGATTTGCAGGATGGGGTCTCAACAAGCCCTGATTCTTTGACACCAAGTGATCCAGTTCCCTTGAACTCTGTTGGTCCCGCAAATGTTGAAGATGCACCATCATGCTCAACGCAGGATGATGCTCCTTCTGGATTAGACGATTTAGATAAATGTTTTGTTGAAGACATTTTCAACCTGATGCGGAAAGAAGAAACATTTTCTGGGCAAGTGAAACTGATGGAGTGGATACTGCGGATACAAAATTCTTCAGTATTATGTTGGTTCTTAACTAAAGGAGGTGTAATGATTTTAGTAACGTGGTTGAGTCAAGCTGCTGTCGAAGAACAAACAAATGTTTTACTAGTTATCTTAAAGGTTCTTTGTCATTTGCCTCTACATAAAGCACTTCCTTTGCATATGTCAGCCGTATTGCAAAGTGTTAATCGACTGCGGTTTTACAGGACAGCAGACATATCAAACAGGGCAAGAGTTTTGCTATCAAGGTGGAGCAAGTTATTAGCAAAAAACCAAGCTTTGGAGAAACCAAATGGCATTAAAACATCTAGTGATTCAGGACAAGAGTTAGTAATTCTGAAGCAGAGTATCGATGAAGTTATGGGTGATGAATCGTGGAAGTCAAATATGGATATTTCTGAAGACTTCCTTGGAACACCATTTGAAAGTGCAGAGAATTTCAGGAAAGTAAATGCTTCAGAACCCTTGAAGTTATTGACAGCATCATCAGATGAGTCAAATAAGAAGAACATCCTCGGTGTATCTTCATCTCAATTTCGAGAGCGCAGAAAAGTTCAGTTGGTGGAACAACCTGGCCAAAAATCAGCTGGGAGAAGTGTTCAGGCCACAAGGACAACACCTGTGAGTCAGGCTCGTCCAATGTCTGCTGATGATATCCAAAAAGCAAAAATGCGAGCACAATTTATGCAGAGCAAGTATGGGAAATCTGGTTCATCCCATGAAAATAAAGAATTGAAGACTGAAGGTGTGAAAAAACTTAAAACTTCTCAAGCAAGCATTTTGCCTGTGGTACCCAAAGTTCCAATTCGGTCTAACATTGAGGAACCCAATATACCTGCGACATATCCTTTGAAAGAGAGGGAAACTCCTAATAGGCCCGAAACTACTATTGCCCCAAAGCGGAGTATGGATTTGAAGGAGCCCATATTAGAGAAGTGCAGGAGAATCCAGATCCCATGGAAGATGCCTCCAGAAATAAAACTCGATCCTTCGTGGAGTGTTGGTGGTGGTGAGAATGGCAAAGAAAATGAAGTCCAGAGAAACAGAAACCGCCGCGAGAAGGAAATTATTTACCGGACAGTCCAGGAGACACCATCTAACCCGAAGGAACCATGGGACATTGAAATGGACTACGATGATTCTTTAACACCAGAAATACCAATAGAACAGCCGCCTGATGTTGCCGATTCCACTGAAACACAAGCTTTCCCTAGAGAATATAATCCAGAAACAATGGTCGTTCCTTCTCAAGGAGCAAACAGCGTCGCTTCCTTGCCACCGGCCTTATCTCAAATTAACAAAGCAAGCGCAGCTGAACCGGATCTAGAACTGCTTGCAGTACTGCTAAAAAATCCAGAACTGGTGTTTGCTTTGACTTCCGGCCAGGCTGCTAACTTGTCGAGCGAGGATACAGTAAAACTGCTGGATATGATTAAGTCCGGTGGGGCTGGTGTTGCCGGTAGTGTAAATGGTTTAGGTAGAAAAATGGAGGAGAGGGTCGAGGTTTCTCTTCCATCTCCGACACCTTCGAGCAACCCTGGAACGAGTGGATGGAAGGGAGATGCTGGAAGGAATGCATTTCCCCAACAGATGCCACAGGTTTCATCTGCTCATCGCAGTATTCCGCCTGAACGGCTATCAACTCCGCAGCCAGCGGTACCTTCATACTCACCGGATTATTATCCTATGCAAACACCGGCATCGGAGATGACTTCTATTACGAAGAACACACACTTTCACAACTTATCGAACATGACTGTGCCATCAGTTTGGGGTGAGAGCACGAGCAATGTCGAACGAGCGCCTCTGTCTACCTCATATAATCTAGCAGAAATGCAGCAGCCCTTGTTTTCGAATATGGCAAGGCAACAAAGACAACCGCAGCCGTTACAACAACAACAACAACGTTTTTCTACACCTACGTACTCGCCTAATCCGCCGATGGGAAAAGCCGTCCCTCCGTCCGAGTCGTGGAGAGCCAGGCAGGATTTGACTTCAAATTACCATTACTTAGAGAACCAAAACCAGTATAACGCATCGCATGGGGGACATTTGCAGCCTCACTTGTCAGGTCCTTGGGAAGGATATGAACGTGTTGGCAGCAACCAAGATTTCCATTCGTGGAGTCCGGATGATGATGATAGTCCGAGTAGAAATCCCGGCTACATGTACGGAAGAGAACCCAGAACAAATCCGGGACGGGATTACACGTCAAGGGGAAGGAATCCTGCCGGATACCGCGGTCATACTCGGCAGCGGGGGAACAGATGGCCTAACCGCGGCGGAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009791 GO:0009889 GO:0010228 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

985

Amino Acids

109.51

Weight (kDa)

7.98

Isoelectric Point (pI)

55.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009604)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02560 AT4G02560
fragaria_vesca	FvH4_2g25100 FvH4_2g25100 FvH4_2g25100
malus_domestica	MD03G1284300.v1.1 MD11G1302000.v1.1
prunus_persica	Prupe.8G255600_v2.0.a1 Prupe.8G255600_v2.0.a1
pyrus_communis	pycom03g22510 pycom11g26460
rosa_chinensis	RchiOBHm_Chr6g0293161
rosa_laevigata	RLG00000011970
rosa_multiflora	Rmu_sc0014786.1_g000002
rosa_roxburghii	Rroxscaffold_7G00174400
rosa_rugosa	Rorug06G0233000 Rorug06G0233100
rosa_samantha	Rh6AG345700 Rh6BG353500 Rh6CG359900 Rh6DG346300
rosa_wichuraiana	Rw6G030130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1507
Acc65I	GGTACC	2 cut(s)	1453, 2320
AccB1I	GGYRCC	3 cut(s)	119, 1453, 2320
AccB7I	CCANNNNNTGG	2 cut(s)	163, 943
AccI	GTMKAC	1 cut(s)	2474
AccII	CGCG	3 cut(s)	1719, 2904, 2943
AccIII	TCCGGA	1 cut(s)	2791
AclI	AACGTT	1 cut(s)	2569
AclWI	GGATC	6 cut(s)	2, 15, 473, 1609, 1643, 1992
AcoI	YGGCCR	2 cut(s)	1237, 2044
AcsI	RAATTY	2 cut(s)	670, 1099
AcuI	CTGAAG	5 cut(s)	660, 1022, 1083, 1104, 1425
AdeI	CACNNNGTG	1 cut(s)	476
AfaI	GTAC	6 cut(s)	387, 1455, 2004, 2322, 2588, 2834
AflIII	ACRYGT	3 cut(s)	2755, 2829, 2871
AgeI	ACCGGT	1 cut(s)	137
AhlI	ACTAGT	2 cut(s)	382, 769
AjiI	CACGTC	1 cut(s)	2874
AjnI	CCWGG	5 cut(s)	1234, 1746, 2046, 2200, 2642
AjuI	GAANNNNNNNTTGG	2 cut(s)	1056, 1088
AloI	GAACNNNNNNTCC	2 cut(s)	1357, 1389
AluBI	AGCT	9 cut(s)	79, 103, 170, 307, 740, 941, 1250, 1868, 1976
AluI	AGCT	9 cut(s)	79, 103, 170, 307, 740, 941, 1250, 1868, 1976
Alw21I	GWGCWC	4 cut(s)	178, 309, 1342, 2447
Alw26I	GTCTC	3 cut(s)	451, 1745, 2943
AlwI	GGATC	6 cut(s)	2, 15, 473, 1609, 1643, 1992
Ama87I	CYCGRG	1 cut(s)	300
Aor13HI	TCCGGA	1 cut(s)	2791
AoxI	GGCC	7 cut(s)	405, 1237, 1266, 1538, 1944, 2044, 2933
ApoI	RAATTY	2 cut(s)	670, 1099
ArsI	GACNNNNNNTTYG	2 cut(s)	1495, 1527
AsiGI	ACCGGT	1 cut(s)	137
Asp718I	GGTACC	2 cut(s)	1453, 2320
AspA2I	CCTAGG	1 cut(s)	218
AspLEI	GCGC	3 cut(s)	1209, 1973, 2467
AspS9I	GGNCC	5 cut(s)	33, 197, 503, 1539, 2735
AsuC2I	CCSGG	3 cut(s)	41, 2823, 2859
AsuHPI	GGTGA	6 cut(s)	127, 431, 1040, 1685, 2325, 2450
AsuII	TTCGAA	1 cut(s)	2516
AvaI	CYCGRG	1 cut(s)	300
AvaII	GGWCC	4 cut(s)	33, 197, 503, 2735
AvrII	CCTAGG	1 cut(s)	218
BaeI	ACNNNNGTAYC	2 cut(s)	2890, 2923
BalI	TGGCCA	1 cut(s)	1239
BamHI	GGATCC	1 cut(s)	7
BanI	GGYRCC	3 cut(s)	119, 1453, 2320
BanII	GRGCYC	2 cut(s)	309, 1587
BauI	CACGAG	1 cut(s)	2446
BbsI	GAAGAC	3 cut(s)	597, 1071, 1406
Bbv12I	GWGCWC	4 cut(s)	178, 309, 1342, 2447
BceAI	ACGGC	4 cut(s)	818, 2312, 2533, 2600
BciT130I	CCWGG	5 cut(s)	1236, 1748, 2048, 2202, 2644
BciVI	GTATCC	4 cut(s)	648, 657, 2065, 2891
BcnI	CCSGG	3 cut(s)	41, 2823, 2859
BcoDI	GTCTC	3 cut(s)	451, 1745, 2943
BcuI	ACTAGT	2 cut(s)	382, 769
BfaI	CTAG	7 cut(s)	219, 383, 770, 972, 1875, 1988, 2489
BfoI	RGCGCY	1 cut(s)	2468
BfuAI	ACCTGC	1 cut(s)	1507
BfuI	GTATCC	4 cut(s)	648, 657, 2065, 2891
BglI	GCCNNNNNGGC	1 cut(s)	2296
BlnI	CCTAGG	1 cut(s)	218
BmcAI	AGTACT	1 cut(s)	2004
Bme1390I	CCNGG	8 cut(s)	41, 1236, 1748, 2048, 2202, 2644, 2823, 2859
Bme18I	GGWCC	4 cut(s)	33, 197, 503, 2735
BmeT110I	CYCGRG	1 cut(s)	300
BmgBI	CACGTC	1 cut(s)	2874
BmgT120I	GGNCC	5 cut(s)	33, 197, 503, 1539, 2735
BmiI	GGNNCC	9 cut(s)	9, 34, 121, 505, 1455, 1488, 1584, 1773, 2322
BmrFI	CCNGG	8 cut(s)	41, 1236, 1748, 2048, 2202, 2644, 2823, 2859
BmsI	GCATC	9 cut(s)	511, 538, 597, 1154, 1617, 2215, 2244, 2372, 2708
BpiI	GAAGAC	3 cut(s)	597, 1071, 1406
BplI	GAGNNNNNCTC	4 cut(s)	1279, 1311, 1513, 1545
BpmI	CTGGAG	2 cut(s)	89, 1617
Bpu14I	TTCGAA	1 cut(s)	2516
BpuEI	CTTGAG	2 cut(s)	1416, 1896
BpuMI	CCSGG	3 cut(s)	41, 2823, 2859
Bsa29I	ATCGAT	2 cut(s)	96, 1014
BsaAI	YACGTR	1 cut(s)	2586
BsaBI	GATNNNNATC	1 cut(s)	2343
BsaI	GGTCTC	1 cut(s)	451
BsaWI	WCCGGW	6 cut(s)	137, 1737, 1981, 2102, 2335, 2791
BsaXI	ACNNNNNCTCC	3 cut(s)	26, 1651, 1681
Bse118I	RCCGGY	4 cut(s)	137, 1942, 2120, 2359
Bse1I	ACTGG	3 cut(s)	482, 2028, 2689
Bse3DI	GCAATG	1 cut(s)	2458
Bse8I	GATNNNNATC	1 cut(s)	2343
BseAI	TCCGGA	1 cut(s)	2791
BseBI	CCWGG	5 cut(s)	1236, 1748, 2048, 2202, 2644
BseCI	ATCGAT	2 cut(s)	96, 1014
BseGI	GGATG	6 cut(s)	445, 550, 1173, 1376, 2219, 2800
BseJI	GATNNNNATC	1 cut(s)	2343
BseMI	GCAATG	1 cut(s)	2458
BseNI	ACTGG	3 cut(s)	482, 2028, 2689
BseRI	GAGGAG	1 cut(s)	2168
BseYI	CCCAGC	1 cut(s)	1250
BsgI	GTGCAG	2 cut(s)	1113, 1621
Bsh1236I	CGCG	3 cut(s)	1719, 2904, 2943
Bsh1285I	CGRYCG	1 cut(s)	368
BshFI	GGCC	7 cut(s)	407, 1239, 1268, 1540, 1946, 2046, 2935
BshNI	GGYRCC	3 cut(s)	119, 1453, 2320
BshTI	ACCGGT	1 cut(s)	137
BshVI	ATCGAT	2 cut(s)	96, 1014
BsiEI	CGRYCG	1 cut(s)	368
BsiHKAI	GWGCWC	4 cut(s)	178, 309, 1342, 2447
BsiHKCI	CYCGRG	1 cut(s)	300
BslFI	GGGAC	6 cut(s)	46, 489, 1793, 2603, 2724, 2874
BsmAI	GTCTC	3 cut(s)	451, 1745, 2943
BsmFI	GGGAC	6 cut(s)	46, 489, 1793, 2603, 2724, 2874
BsmI	GAATGC	1 cut(s)	2242
BsnI	GGCC	7 cut(s)	407, 1239, 1268, 1540, 1946, 2046, 2935
Bso31I	GGTCTC	1 cut(s)	451
BsoBI	CYCGRG	1 cut(s)	300
Bsp119I	TTCGAA	1 cut(s)	2516
Bsp1286I	GDGCHC	5 cut(s)	178, 309, 1342, 1587, 2447
Bsp13I	TCCGGA	1 cut(s)	2791
Bsp143I	GATC	7 cut(s)	7, 93, 97, 478, 1614, 1648, 1984
Bsp19I	CCATGG	2 cut(s)	1619, 1775
BspANI	GGCC	7 cut(s)	407, 1239, 1268, 1540, 1946, 2046, 2935
BspDI	ATCGAT	2 cut(s)	96, 1014
BspEI	TCCGGA	1 cut(s)	2791
BspFNI	CGCG	3 cut(s)	1719, 2904, 2943
BspLI	GGNNCC	9 cut(s)	9, 34, 121, 505, 1455, 1488, 1584, 1773, 2322
BspMI	ACCTGC	1 cut(s)	1507
BspPI	GGATC	6 cut(s)	2, 15, 473, 1609, 1643, 1992
BspT104I	TTCGAA	1 cut(s)	2516
BspT107I	GGYRCC	3 cut(s)	119, 1453, 2320
BspTNI	GGTCTC	1 cut(s)	451
BsrDI	GCAATG	1 cut(s)	2458
BsrFI	RCCGGY	4 cut(s)	137, 1942, 2120, 2359
BsrI	ACTGG	3 cut(s)	482, 2028, 2689
BssAI	RCCGGY	4 cut(s)	137, 1942, 2120, 2359
BssMI	GATC	7 cut(s)	7, 93, 97, 478, 1614, 1648, 1984
BssSI	CACGAG	1 cut(s)	2446
BssT1I	CCWWGG	5 cut(s)	218, 1072, 1619, 1775, 2738
Bst2BI	CACGAG	1 cut(s)	2446
Bst2UI	CCWGG	5 cut(s)	1236, 1748, 2048, 2202, 2644
Bst4CI	ACNGT	7 cut(s)	331, 359, 366, 390, 1744, 2077, 2422
Bst6I	CTCTTC	2 cut(s)	2178, 2833
BstAPI	GCANNNNNTGC	2 cut(s)	126, 173
BstBAI	YACGTR	1 cut(s)	2586
BstBI	TTCGAA	1 cut(s)	2516
BstC8I	GCNNGC	5 cut(s)	1338, 1438, 1969, 1998, 2316
BstDEI	CTNAG	1 cut(s)	2674
BstDSI	CCRYGG	4 cut(s)	1619, 1775, 2902, 2941
BstENI	CCTNNNNNAGG	2 cut(s)	1911, 2742
BstF5I	GGATG	6 cut(s)	445, 550, 1173, 1376, 2219, 2800
BstFNI	CGCG	3 cut(s)	1719, 2904, 2943
BstH2I	RGCGCY	1 cut(s)	2468
BstHHI	GCGC	3 cut(s)	1209, 1973, 2467
BstKTI	GATC	7 cut(s)	10, 96, 100, 481, 1617, 1651, 1987
BstMAI	GTCTC	3 cut(s)	451, 1745, 2943
BstMBI	GATC	7 cut(s)	7, 93, 97, 478, 1614, 1648, 1984
BstMCI	CGRYCG	1 cut(s)	368
BstMWI	GCNNNNNNNGC	7 cut(s)	76, 126, 173, 1973, 2117, 2296, 2599
BstNI	CCWGG	5 cut(s)	1236, 1748, 2048, 2202, 2644
BstNSI	RCATGY	1 cut(s)	2833
BstSCI	CCNGG	8 cut(s)	39, 1234, 1746, 2046, 2200, 2642, 2821, 2857
BstSNI	TACGTA	1 cut(s)	2586
BstUI	CGCG	3 cut(s)	1719, 2904, 2943
BstV2I	GAAGAC	3 cut(s)	597, 1071, 1406
BstX2I	RGATCY	3 cut(s)	7, 1614, 1984
BstXI	CCANNNNNNTGG	1 cut(s)	2433
BstYI	RGATCY	3 cut(s)	7, 1614, 1984
Bsu15I	ATCGAT	2 cut(s)	96, 1014
BsuI	GTATCC	4 cut(s)	648, 657, 2065, 2891
BsuRI	GGCC	7 cut(s)	407, 1239, 1268, 1540, 1946, 2046, 2935
BsuTUI	ATCGAT	2 cut(s)	96, 1014
BtgI	CCRYGG	4 cut(s)	1619, 1775, 2902, 2941
BtgZI	GCGATG	2 cut(s)	2261, 2685
BtrI	CACGTC	1 cut(s)	2874
BtsCI	GGATG	6 cut(s)	445, 550, 1173, 1376, 2219, 2800
BtsIMutI	CAGTG	1 cut(s)	1854
BveI	ACCTGC	1 cut(s)	1507
Cac8I	GCNNGC	5 cut(s)	1338, 1438, 1969, 1998, 2316
CfoI	GCGC	3 cut(s)	1209, 1973, 2467
Cfr10I	RCCGGY	4 cut(s)	137, 1942, 2120, 2359
Cfr13I	GGNCC	5 cut(s)	33, 197, 503, 1539, 2735
Cfr42I	CCGCGG	2 cut(s)	2905, 2944
ClaI	ATCGAT	2 cut(s)	96, 1014
CseI	GACGC	1 cut(s)	1915
Csp6I	GTAC	6 cut(s)	386, 1454, 2003, 2321, 2587, 2833
CspAI	ACCGGT	1 cut(s)	137
CviAII	CATG	7 cut(s)	531, 1382, 1620, 1776, 2416, 2705, 2830
CviQI	GTAC	6 cut(s)	386, 1454, 2003, 2321, 2587, 2833
DdeI	CTNAG	1 cut(s)	2674
DpnI	GATC	7 cut(s)	9, 95, 99, 480, 1616, 1650, 1986
DpnII	GATC	7 cut(s)	7, 93, 97, 478, 1614, 1648, 1984
DraIII	CACNNNGTG	1 cut(s)	476
EaeI	YGGCCR	2 cut(s)	1237, 2044
Eam1104I	CTCTTC	2 cut(s)	2178, 2833
EarI	CTCTTC	2 cut(s)	2178, 2833
EciI	GGCGGA	3 cut(s)	32, 2277, 2589
Ecl136II	GAGCTC	1 cut(s)	307
Eco105I	TACGTA	1 cut(s)	2586
Eco130I	CCWWGG	5 cut(s)	218, 1072, 1619, 1775, 2738
Eco147I	AGGCCT	1 cut(s)	407
Eco24I	GRGCYC	2 cut(s)	309, 1587
Eco31I	GGTCTC	1 cut(s)	451
Eco32I	GATATC	1 cut(s)	1318
Eco47I	GGWCC	4 cut(s)	33, 197, 503, 2735
Eco53kI	GAGCTC	1 cut(s)	307
Eco57I	CTGAAG	5 cut(s)	660, 1022, 1083, 1104, 1425
Eco88I	CYCGRG	1 cut(s)	300
EcoICRI	GAGCTC	1 cut(s)	307
EcoNI	CCTNNNNNAGG	2 cut(s)	1911, 2742
EcoO109I	RGGNCCY	2 cut(s)	33, 2735
EcoRII	CCWGG	5 cut(s)	1234, 1746, 2046, 2200, 2642
EcoRV	GATATC	1 cut(s)	1318
EcoT14I	CCWWGG	5 cut(s)	218, 1072, 1619, 1775, 2738
EcoT22I	ATGCAT	1 cut(s)	2242
EcoT38I	GRGCYC	2 cut(s)	309, 1587
ErhI	CCWWGG	5 cut(s)	218, 1072, 1619, 1775, 2738
FaeI	CATG	7 cut(s)	534, 1385, 1623, 1779, 2419, 2708, 2833
FalI	AAGNNNNNCTT	2 cut(s)	1056, 1088
FaqI	GGGAC	6 cut(s)	46, 489, 1793, 2603, 2724, 2874
FatI	CATG	7 cut(s)	530, 1381, 1619, 1775, 2415, 2704, 2829
FauI	CCCGC	2 cut(s)	514, 2913
FauNDI	CATATG	1 cut(s)	825
FblI	GTMKAC	1 cut(s)	2474
FokI	GGATG	6 cut(s)	452, 557, 1160, 1363, 2226, 2807
FriOI	GRGCYC	2 cut(s)	309, 1587
FspBI	CTAG	7 cut(s)	219, 383, 770, 972, 1875, 1988, 2489
GlaI	GCGC	3 cut(s)	1208, 1972, 2466
GsaI	CCCAGC	1 cut(s)	1254
GsuI	CTGGAG	2 cut(s)	89, 1617
HaeII	RGCGCY	1 cut(s)	2468
HaeIII	GGCC	7 cut(s)	407, 1239, 1268, 1540, 1946, 2046, 2935
HgaI	GACGC	1 cut(s)	1915
HhaI	GCGC	3 cut(s)	1209, 1973, 2467
Hin1II	CATG	7 cut(s)	534, 1385, 1623, 1779, 2419, 2708, 2833
Hin6I	GCGC	3 cut(s)	1207, 1971, 2465
HinP1I	GCGC	3 cut(s)	1207, 1971, 2465
HincII	GTYRAC	1 cut(s)	362
HindII	GTYRAC	1 cut(s)	362
HindIII	AAGCTT	2 cut(s)	939, 1866
HphI	GGTGA	6 cut(s)	127, 431, 1040, 1685, 2325, 2450
Hpy166II	GTNNAC	3 cut(s)	362, 422, 2475
Hpy188I	TCNGA	8 cut(s)	1002, 1063, 1123, 1153, 2184, 2368, 2629, 2811
Hpy8I	GTNNAC	3 cut(s)	362, 422, 2475
Hpy99I	CGWCG	3 cut(s)	16, 119, 1931
HpyCH4III	ACNGT	7 cut(s)	331, 359, 366, 390, 1744, 2077, 2422
HpyCH4IV	ACGT	5 cut(s)	725, 2569, 2585, 2755, 2873
HpyF10VI	GCNNNNNNNGC	7 cut(s)	76, 126, 173, 1973, 2117, 2296, 2599
HpyF3I	CTNAG	1 cut(s)	2674
HpySE526I	ACGT	5 cut(s)	725, 2569, 2585, 2755, 2873
Hsp92II	CATG	7 cut(s)	534, 1385, 1623, 1779, 2419, 2708, 2833
HspAI	GCGC	3 cut(s)	1207, 1971, 2465
Kpn2I	TCCGGA	1 cut(s)	2791
KpnI	GGTACC	2 cut(s)	1457, 2324
KspI	CCGCGG	2 cut(s)	2905, 2944
Kzo9I	GATC	7 cut(s)	7, 93, 97, 478, 1614, 1648, 1984
LmnI	GCTCC	7 cut(s)	76, 108, 304, 556, 915, 1582, 1916
LweI	GCATC	9 cut(s)	511, 538, 597, 1154, 1617, 2215, 2244, 2372, 2708
MaeI	CTAG	7 cut(s)	219, 383, 770, 972, 1875, 1988, 2489
MaeII	ACGT	5 cut(s)	725, 2569, 2585, 2755, 2873
MaeIII	GTNAC	3 cut(s)	331, 721, 2550
MalI	GATC	7 cut(s)	9, 95, 99, 480, 1616, 1650, 1986
MboI	GATC	7 cut(s)	7, 93, 97, 478, 1614, 1648, 1984
MfeI	CAATTG	1 cut(s)	201
MflI	RGATCY	3 cut(s)	7, 1614, 1984
MhlI	GDGCHC	5 cut(s)	178, 309, 1342, 1587, 2447
MlsI	TGGCCA	1 cut(s)	1239
MluNI	TGGCCA	1 cut(s)	1239
MlyI	GAGTC	7 cut(s)	53, 59, 742, 1166, 1297, 2639, 2797
MmeI	TCCRAC	1 cut(s)	2207
Mox20I	TGGCCA	1 cut(s)	1239
Mph1103I	ATGCAT	1 cut(s)	2242
MroI	TCCGGA	1 cut(s)	2791
MscI	TGGCCA	1 cut(s)	1239
MslI	CAYNNNNRTG	3 cut(s)	529, 1787, 2420
Msp20I	TGGCCA	1 cut(s)	1239
MspA1I	CMGCKG	7 cut(s)	170, 1250, 1976, 2318, 2904, 2920, 2943
MspR9I	CCNGG	8 cut(s)	41, 1236, 1748, 2048, 2202, 2644, 2823, 2859
MunI	CAATTG	1 cut(s)	201
Mva1269I	GAATGC	1 cut(s)	2242
MvaI	CCWGG	5 cut(s)	1236, 1748, 2048, 2202, 2644
MvnI	CGCG	3 cut(s)	1719, 2904, 2943
MwoI	GCNNNNNNNGC	7 cut(s)	76, 126, 173, 1973, 2117, 2296, 2599
NciI	CCSGG	3 cut(s)	41, 2823, 2859
NcoI	CCATGG	2 cut(s)	1619, 1775
NdeI	CATATG	1 cut(s)	825
NdeII	GATC	7 cut(s)	7, 93, 97, 478, 1614, 1648, 1984
NlaIII	CATG	7 cut(s)	534, 1385, 1623, 1779, 2419, 2708, 2833
NlaIV	GGNNCC	9 cut(s)	9, 34, 121, 505, 1455, 1488, 1584, 1773, 2322
NmeAIII	GCCGAG	1 cut(s)	2893
NmuCI	GTSAC	1 cut(s)	331
NsiI	ATGCAT	1 cut(s)	2242
NspI	RCATGY	1 cut(s)	2833
NspV	TTCGAA	1 cut(s)	2516
PceI	AGGCCT	1 cut(s)	407
PciI	ACATGT	1 cut(s)	2829
PctI	GAATGC	1 cut(s)	2242
PflMI	CCANNNNNTGG	2 cut(s)	163, 943
PfoI	TCCNGGA	2 cut(s)	1746, 2857
PinAI	ACCGGT	1 cut(s)	137
PleI	GAGTC	7 cut(s)	52, 59, 741, 1165, 1296, 2638, 2796
PpsI	GAGTC	7 cut(s)	52, 59, 741, 1165, 1296, 2638, 2796
Ppu21I	YACGTR	1 cut(s)	2586
PpuMI	RGGWCCY	2 cut(s)	33, 2735
PscI	ACATGT	1 cut(s)	2829
Psp124BI	GAGCTC	1 cut(s)	309
Psp1406I	AACGTT	1 cut(s)	2569
Psp5II	RGGWCCY	2 cut(s)	33, 2735
Psp6I	CCWGG	5 cut(s)	1234, 1746, 2046, 2200, 2642
PspFI	CCCAGC	1 cut(s)	1250
PspGI	CCWGG	5 cut(s)	1234, 1746, 2046, 2200, 2642
PspN4I	GGNNCC	9 cut(s)	9, 34, 121, 505, 1455, 1488, 1584, 1773, 2322
PspPI	GGNCC	5 cut(s)	33, 197, 503, 1539, 2735
PspPPI	RGGWCCY	2 cut(s)	33, 2735
PsrI	GAACNNNNNNTAC	4 cut(s)	1446, 1478, 1479, 1511
PsuI	RGATCY	3 cut(s)	7, 1614, 1984
PvuII	CAGCTG	3 cut(s)	170, 1250, 1976
RsaI	GTAC	6 cut(s)	387, 1455, 2004, 2322, 2588, 2834
RsaNI	GTAC	6 cut(s)	386, 1454, 2003, 2321, 2587, 2833
RseI	CAYNNNNRTG	3 cut(s)	529, 1787, 2420
SacI	GAGCTC	1 cut(s)	309
SacII	CCGCGG	2 cut(s)	2905, 2944
Sau3AI	GATC	7 cut(s)	7, 93, 97, 478, 1614, 1648, 1984
Sau96I	GGNCC	5 cut(s)	33, 197, 503, 1539, 2735
ScaI	AGTACT	1 cut(s)	2004
SchI	GAGTC	7 cut(s)	53, 59, 742, 1166, 1297, 2639, 2797
ScrFI	CCNGG	8 cut(s)	41, 1236, 1748, 2048, 2202, 2644, 2823, 2859
SduI	GDGCHC	5 cut(s)	178, 309, 1342, 1587, 2447
SfaNI	GCATC	9 cut(s)	511, 538, 597, 1154, 1617, 2215, 2244, 2372, 2708
Sfr303I	CCGCGG	2 cut(s)	2905, 2944
SfuI	TTCGAA	1 cut(s)	2516
SgrAI	CRCCGGYG	1 cut(s)	137
SgrBI	CCGCGG	2 cut(s)	2905, 2944
SinI	GGWCC	4 cut(s)	33, 197, 503, 2735
SmiMI	CAYNNNNRTG	3 cut(s)	529, 1787, 2420
SmlI	CTYRAG	2 cut(s)	1431, 1911
SmoI	CTYRAG	2 cut(s)	1431, 1911
SnaBI	TACGTA	1 cut(s)	2586
SpeI	ACTAGT	2 cut(s)	382, 769
SseBI	AGGCCT	1 cut(s)	407
SspMI	CTAG	7 cut(s)	219, 383, 770, 972, 1875, 1988, 2489
SstI	GAGCTC	1 cut(s)	309
StuI	AGGCCT	1 cut(s)	407
StyD4I	CCNGG	8 cut(s)	39, 1234, 1746, 2046, 2200, 2642, 2821, 2857
StyI	CCWWGG	5 cut(s)	218, 1072, 1619, 1775, 2738
TaaI	ACNGT	7 cut(s)	331, 359, 366, 390, 1744, 2077, 2422
TaiI	ACGT	5 cut(s)	728, 2572, 2588, 2758, 2876
TaqII	GACCGA	1 cut(s)	1461
TatI	WGTACW	2 cut(s)	385, 2002
TauI	GCSGC	3 cut(s)	1719, 1837, 2946
TscAI	CASTG	1 cut(s)	1861
TseFI	GTSAC	1 cut(s)	331
Tsp45I	GTSAC	1 cut(s)	331
TspDTI	ATGAA	9 cut(s)	1032, 1047, 1179, 1365, 1398, 1707, 2256, 2316, 2766
TspGWI	ACGGA	2 cut(s)	2613, 2850
TspRI	CASTG	1 cut(s)	1861
Van91I	CCANNNNNTGG	2 cut(s)	163, 943
VpaK11BI	GGWCC	4 cut(s)	33, 197, 503, 2735
XagI	CCTNNNNNAGG	2 cut(s)	1911, 2742
XapI	RAATTY	2 cut(s)	670, 1099
XbaI	TCTAGA	1 cut(s)	1987
XceI	RCATGY	1 cut(s)	2833
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1247
XmaJI	CCTAGG	1 cut(s)	218
XmiI	GTMKAC	1 cut(s)	2474
XspI	CTAG	7 cut(s)	219, 383, 770, 972, 1875, 1988, 2489
ZrmI	AGTACT	1 cut(s)	2004
Zsp2I	ATGCAT	1 cut(s)	2242

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.