homeobox protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G02560 AT4G02560 |
| fragaria_vesca | FvH4_2g25100 FvH4_2g25100 FvH4_2g25100 |
| malus_domestica | MD03G1284300.v1.1 MD11G1302000.v1.1 |
| prunus_persica | Prupe.8G255600_v2.0.a1 Prupe.8G255600_v2.0.a1 |
| pyrus_communis | pycom03g22510 pycom11g26460 |
| rosa_chinensis | RchiOBHm_Chr6g0293161 |
| rosa_laevigata | RLG00000011970 |
| rosa_multiflora | Rmu_sc0014786.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00174400 |
| rosa_rugosa | Rorug06G0233000 Rorug06G0233100 |
| rosa_samantha | Rh6AG345700 Rh6BG353500 Rh6CG359900 Rh6DG346300 |
| rosa_wichuraiana | Rw6G030130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 14 |
| AciI | CCGC | 1 cut(s) | 113 |
| AfaI | GTAC | 1 cut(s) | 253 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 402 |
| AgsI | TTSAA | 6 cut(s) | 68, 400, 420, 481, 493, 545 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 439 |
| AleI | CACNNNNGTG | 1 cut(s) | 617 |
| AluBI | AGCT | 4 cut(s) | 142, 430, 541, 630 |
| AluI | AGCT | 4 cut(s) | 142, 430, 541, 630 |
| Alw21I | GWGCWC | 1 cut(s) | 356 |
| AoxI | GGCC | 1 cut(s) | 393 |
| ApeKI | GCWGC | 2 cut(s) | 200, 538 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 614, 646 |
| AsuHPI | GGTGA | 2 cut(s) | 137, 277 |
| Bbv12I | GWGCWC | 1 cut(s) | 356 |
| BbvI | GCAGC | 2 cut(s) | 212, 550 |
| BceAI | ACGGC | 2 cut(s) | 33, 273 |
| BclI | TGATCA | 2 cut(s) | 99, 283 |
| BfaI | CTAG | 1 cut(s) | 407 |
| BisI | GCNGC | 3 cut(s) | 114, 201, 539 |
| BlsI | GCNGC | 3 cut(s) | 115, 202, 540 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 439 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 419, 451 |
| BpmI | CTGGAG | 1 cut(s) | 646 |
| Bpu10I | CCTNAGC | 1 cut(s) | 639 |
| BpuEI | CTTGAG | 1 cut(s) | 379 |
| BsaJI | CCNNGG | 2 cut(s) | 39, 615 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 209, 239, 326, 356 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 402 |
| Bse118I | RCCGGY | 1 cut(s) | 463 |
| Bse1I | ACTGG | 2 cut(s) | 379, 629 |
| BseDI | CCNNGG | 2 cut(s) | 39, 615 |
| BseGI | GGATG | 1 cut(s) | 169 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 402 |
| BseNI | ACTGG | 2 cut(s) | 379, 629 |
| BseRI | GAGGAG | 1 cut(s) | 440 |
| BseXI | GCAGC | 2 cut(s) | 212, 550 |
| BsgI | GTGCAG | 1 cut(s) | 94 |
| BshFI | GGCC | 1 cut(s) | 395 |
| BsiHKAI | GWGCWC | 1 cut(s) | 356 |
| BsiSI | CCGG | 4 cut(s) | 204, 294, 310, 464 |
| BslFI | GGGAC | 2 cut(s) | 259, 425 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 402 |
| BsmFI | GGGAC | 2 cut(s) | 259, 425 |
| BsnI | GGCC | 1 cut(s) | 395 |
| Bsp1286I | GDGCHC | 1 cut(s) | 356 |
| Bsp143I | GATC | 3 cut(s) | 99, 267, 283 |
| BspACI | CCGC | 1 cut(s) | 113 |
| BspANI | GGCC | 1 cut(s) | 395 |
| BspQI | GCTCTTC | 1 cut(s) | 310 |
| BsrFI | RCCGGY | 1 cut(s) | 463 |
| BsrI | ACTGG | 2 cut(s) | 379, 629 |
| BssAI | RCCGGY | 1 cut(s) | 463 |
| BssECI | CCNNGG | 2 cut(s) | 39, 615 |
| BssMI | GATC | 3 cut(s) | 99, 267, 283 |
| BssNAI | GTATAC | 1 cut(s) | 15 |
| BssT1I | CCWWGG | 2 cut(s) | 39, 615 |
| Bst1107I | GTATAC | 1 cut(s) | 15 |
| Bst4CI | ACNGT | 4 cut(s) | 72, 181, 193, 664 |
| Bst6I | CTCTTC | 2 cut(s) | 310, 384 |
| BstC8I | GCNNGC | 2 cut(s) | 307, 465 |
| BstDEI | CTNAG | 1 cut(s) | 639 |
| BstF5I | GGATG | 1 cut(s) | 169 |
| BstKTI | GATC | 3 cut(s) | 102, 270, 286 |
| BstMBI | GATC | 3 cut(s) | 99, 267, 283 |
| BstV1I | GCAGC | 2 cut(s) | 212, 550 |
| BstZ17I | GTATAC | 1 cut(s) | 15 |
| BsuRI | GGCC | 1 cut(s) | 395 |
| BtsCI | GGATG | 1 cut(s) | 169 |
| BtsIMutI | CAGTG | 1 cut(s) | 372 |
| Cac8I | GCNNGC | 2 cut(s) | 307, 465 |
| Cfr10I | RCCGGY | 1 cut(s) | 463 |
| Csp6I | GTAC | 1 cut(s) | 252 |
| CviAII | CATG | 2 cut(s) | 515, 521 |
| CviQI | GTAC | 1 cut(s) | 252 |
| DdeI | CTNAG | 1 cut(s) | 639 |
| DpnI | GATC | 3 cut(s) | 101, 269, 285 |
| DpnII | GATC | 3 cut(s) | 99, 267, 283 |
| DriI | GACNNNNNGTC | 1 cut(s) | 439 |
| Eam1104I | CTCTTC | 2 cut(s) | 310, 384 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 439 |
| EarI | CTCTTC | 2 cut(s) | 310, 384 |
| Eco130I | CCWWGG | 2 cut(s) | 39, 615 |
| Eco147I | AGGCCT | 1 cut(s) | 395 |
| EcoT14I | CCWWGG | 2 cut(s) | 39, 615 |
| ErhI | CCWWGG | 2 cut(s) | 39, 615 |
| FaeI | CATG | 2 cut(s) | 518, 524 |
| FaiI | YATR | 9 cut(s) | 15, 32, 148, 157, 243, 487, 516, 522, 657 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 341, 373 |
| FaqI | GGGAC | 2 cut(s) | 259, 425 |
| FatI | CATG | 2 cut(s) | 514, 520 |
| FbaI | TGATCA | 2 cut(s) | 99, 283 |
| FblI | GTMKAC | 1 cut(s) | 14 |
| Fnu4HI | GCNGC | 3 cut(s) | 114, 201, 539 |
| FokI | GGATG | 1 cut(s) | 156 |
| Fsp4HI | GCNGC | 3 cut(s) | 114, 201, 539 |
| FspBI | CTAG | 1 cut(s) | 407 |
| GluI | GCNGC | 3 cut(s) | 114, 201, 539 |
| GsuI | CTGGAG | 1 cut(s) | 646 |
| HaeIII | GGCC | 1 cut(s) | 395 |
| HapII | CCGG | 4 cut(s) | 204, 294, 310, 464 |
| Hin1II | CATG | 2 cut(s) | 518, 524 |
| HinfI | GANTC | 3 cut(s) | 434, 440, 575 |
| HpaII | CCGG | 4 cut(s) | 204, 294, 310, 464 |
| HphI | GGTGA | 2 cut(s) | 137, 277 |
| Hpy166II | GTNNAC | 2 cut(s) | 15, 622 |
| Hpy188I | TCNGA | 4 cut(s) | 153, 334, 439, 445 |
| Hpy188III | TCNNGA | 1 cut(s) | 556 |
| Hpy8I | GTNNAC | 2 cut(s) | 15, 622 |
| Hpy99I | CGWCG | 1 cut(s) | 259 |
| HpyAV | CCTTC | 3 cut(s) | 201, 208, 406 |
| HpyCH4III | ACNGT | 4 cut(s) | 72, 181, 193, 664 |
| HpyCH4V | TGCA | 4 cut(s) | 25, 75, 121, 563 |
| HpyF3I | CTNAG | 1 cut(s) | 639 |
| Hsp92II | CATG | 2 cut(s) | 518, 524 |
| KroI | GCCGGC | 1 cut(s) | 463 |
| KroNI | GCCGGC | 1 cut(s) | 465 |
| Ksp22I | TGATCA | 2 cut(s) | 99, 283 |
| Kzo9I | GATC | 3 cut(s) | 99, 267, 283 |
| LguI | GCTCTTC | 1 cut(s) | 310 |
| LmnI | GCTCC | 3 cut(s) | 197, 427, 627 |
| Lsp1109I | GCAGC | 2 cut(s) | 212, 550 |
| MaeI | CTAG | 1 cut(s) | 407 |
| MaeIII | GTNAC | 2 cut(s) | 368, 658 |
| MalI | GATC | 3 cut(s) | 101, 269, 285 |
| MboI | GATC | 3 cut(s) | 99, 267, 283 |
| MboII | GAAGA | 4 cut(s) | 223, 327, 401, 485 |
| MhlI | GDGCHC | 1 cut(s) | 356 |
| MluCI | AATT | 1 cut(s) | 482 |
| MlyI | GAGTC | 2 cut(s) | 428, 449 |
| MmeI | TCCRAC | 2 cut(s) | 175, 197 |
| MnlI | CCTC | 9 cut(s) | 177, 211, 328, 385, 418, 445, 517, 528, 661 |
| MroNI | GCCGGC | 1 cut(s) | 463 |
| MseI | TTAA | 3 cut(s) | 5, 188, 530 |
| MslI | CAYNNNNRTG | 2 cut(s) | 519, 617 |
| MspI | CCGG | 4 cut(s) | 204, 294, 310, 464 |
| NaeI | GCCGGC | 1 cut(s) | 465 |
| NdeII | GATC | 3 cut(s) | 99, 267, 283 |
| NgoMIV | GCCGGC | 1 cut(s) | 463 |
| NlaIII | CATG | 2 cut(s) | 518, 524 |
| NmuCI | GTSAC | 1 cut(s) | 658 |
| OliI | CACNNNNGTG | 1 cut(s) | 617 |
| PceI | AGGCCT | 1 cut(s) | 395 |
| PciSI | GCTCTTC | 1 cut(s) | 310 |
| PdiI | GCCGGC | 1 cut(s) | 465 |
| PfeI | GAWTC | 1 cut(s) | 575 |
| PkrI | GCNGC | 3 cut(s) | 115, 202, 540 |
| PleI | GAGTC | 2 cut(s) | 428, 448 |
| PpsI | GAGTC | 2 cut(s) | 428, 448 |
| RsaI | GTAC | 1 cut(s) | 253 |
| RsaNI | GTAC | 1 cut(s) | 252 |
| RseI | CAYNNNNRTG | 2 cut(s) | 519, 617 |
| SapI | GCTCTTC | 1 cut(s) | 310 |
| SaqAI | TTAA | 3 cut(s) | 5, 188, 530 |
| SatI | GCNGC | 3 cut(s) | 114, 201, 539 |
| Sau3AI | GATC | 3 cut(s) | 99, 267, 283 |
| SchI | GAGTC | 2 cut(s) | 428, 449 |
| SduI | GDGCHC | 1 cut(s) | 356 |
| SetI | ASST | 8 cut(s) | 109, 144, 359, 432, 456, 543, 621, 632 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 519, 617 |
| SmlI | CTYRAG | 1 cut(s) | 358 |
| SmoI | CTYRAG | 1 cut(s) | 358 |
| Sse9I | AATT | 1 cut(s) | 482 |
| SseBI | AGGCCT | 1 cut(s) | 395 |
| SsiI | CCGC | 1 cut(s) | 113 |
| SspI | AATATT | 1 cut(s) | 82 |
| SspMI | CTAG | 1 cut(s) | 407 |
| StuI | AGGCCT | 1 cut(s) | 395 |
| StyI | CCWWGG | 2 cut(s) | 39, 615 |
| TaaI | ACNGT | 4 cut(s) | 72, 181, 193, 664 |
| TaqII | GACCGA | 1 cut(s) | 260 |
| TasI | AATT | 1 cut(s) | 482 |
| TauI | GCSGC | 1 cut(s) | 116 |
| TfiI | GAWTC | 1 cut(s) | 575 |
| Tru1I | TTAA | 3 cut(s) | 5, 188, 530 |
| Tru9I | TTAA | 3 cut(s) | 5, 188, 530 |
| TscAI | CASTG | 1 cut(s) | 379 |
| TseFI | GTSAC | 1 cut(s) | 658 |
| TseI | GCWGC | 2 cut(s) | 200, 538 |
| Tsp45I | GTSAC | 1 cut(s) | 658 |
| TspDTI | ATGAA | 3 cut(s) | 47, 74, 486 |
| TspRI | CASTG | 1 cut(s) | 379 |
| XmiI | GTMKAC | 1 cut(s) | 14 |
| XspI | CTAG | 1 cut(s) | 407 |