Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0009604

Physical Location & Seq

Genomic Coordinates Reverse (-)

54893393 .. 54900724

Gene Structure 7332 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG359900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2343 bp

ATGGAGGATCTCTCTGAGCTAAAGATTGGGAATTCCGTCGAGTCCTTCCACAAGTTCGTCGACTCGCAGAGGGAGCTCTTCCACCGCCAGATCGATGAGCTCCAGAAAATCGTCGTCACCCAATGCAAGCTCACCGGCGCCAATCCTCTCTCCCAAGAGATGGCAGCTGGTGCTCTTTCTATTAATATTGGAAAAAGACCTAGAGATTTGTTAAATCCAAAGGCTATCAAGTATATGCAATCCGTTTTTTCTATTAAAGATGCGATTACGAAGAAGGAATCTCGGGAGATCAGTGCGCTGTTCGGGGTTTCTGTCTCACAGGTTCGTGATTTTTTTAATAGTCAACGATCCAGAGTTAGAAAAATAGTTCAGTTGTCAAGGGAGAAGGCCATCAGATCCACTGAACATAAAGAATTGCTGGAGGGGGTGCCGACAATCTCTGATCCATTGATGCCGACAAGCTCTGATCCATTGATACCAATTAATCCCCTTCCTTTAAACACTATTGATCCGTCCAATGTTGAGGATGCACCATCTTGCTCAACACAAGATGATACTCTTTCTGGACTAGATGACGTTGATAAACATTTTGTTGAAAATATTTTCAACTTGATGCGGAAAGAAGAAACATTTTCTGGGCAAGTGAAAGTGTTAGAGTTGATATTGCGGATACAAAATTCTTCAGTATTATGCTGGTTTTTAACTAAAGGTGGCGTGATGATTTTAGTAACATGGTTGACACAAGCAGCTGATGAAGAACAAACGAGTGTTCTGCTTATCATCTTAAAGGTTCTTTGCCATTTGCCTCTATCCAAAGCTCTTCCTGTTCATATGTCAGCCATACTGCAAAGTGTTAATAGACTGCGGTTTTACAGGACACCAGAAATATCGAACAGGGCAAGGGTTTTGTTATCAAGATGGAGCAAGTCTTTAGCAAGAAGCCAGGCTTTGAAGAAACCAAATGGCATGAAAACATCTAATGATTCACAAGAATTAGCATTGCTGAAGCGAAGTATTGATGAAGCTATAGGCGATGATCCATGGAATTCAAATGGTGATGTTAACGAAGACATCCTTGCATTGCCGTTTGAAAGTGCAGATAAATTAAGGAAATTGGAGTCTTCAGAACCAGTGAAGCTATTGACAGCATCATCAGATGATTCTAATAAGAAACACATCCTAGGTGTATCTTCATCCCAATTTAGAGGACGCAGAAAAGTTCAATTGGTGGAACAGCCCGGCCAAAAAACAGCGGGGAGAAGTTCACAGGTTGCAAAAACAACACCTGTCAGTCAGGCTCGCCCAATGTCTGTTGATGATATCCAAAAAGCAAAATTGCGAGCACAATATATGCAGAGCAAGTATGGAAAGTCTGCTTCCTCTAATGAAAATAAAGAAGTGAAGGCTGAAGGCGTGAACATACCTCCAATCGCTCAGGCCAGCATTTTACCTGTAGTACCTAATGTTCCAGTTCAGTCTAGTATTGAGGAATCCAAGAAACCTGTGACACTTCCTTTGAAAGAGAGGGAAACTCTTGATATAAGTTTACAGCCTATTGGGAGTTTCCAGACTATTGCTCCAAAGCTGAAAACGGATATGAAGGAGCACATCTGGGAGAAGTGCAGGAGAGTCCAGGTGCCGTGGAAGACACCACCAGAAATAAAACTTAATCCAGGATGGAGGGTTGGAGGTGGTGAGAATGGCAAAGAAATGGAAGTCCAGAAAAACAGAAACCACCGCGAGCAGGAAACTATCTACAAGACATTCAAGGAGATACCACCTAACCCGAAGGAACCTTGGGACATTGAAATGGACTATGATGACTCATTGACTCCAGTAATACCAACAGAACAGCCACCTGACACTGACTGTACTGAAACACAACCTTCCCATAGTCGAGAAGTAAATAATGCAGCAGAAACGTTGGTTGTTCCTTCTCAAGGAGTAAACAGTGTTGTTTCTATGGTGCCGCTAACTAATATGGCAAGCAGCACAGCTGAACCAGATCTAGAGCTGCTCGCTGTGCTGCTAAAAAATCCAGAATTGGTGTTTGCCTTGACATCTGGGCAGGCTGGTAACTTGTCCAGTGAGGATACAGTAAAATTGCTGGATATGATTAAGGCTGGTGGGGCTGGTTTCGCTGGTAATTTAAATGGGTTAGCTAGTAAAATGGAGGAGAAGGTTGAAGTTTCTCTTCCATCCCCAACACCTTCAAGCAACCCTGGAACGGTGCGTTACTCGGGCTCATTATGCAATTTTAGCCAGAACTTGTATACATTACATTCCAGTTTTTCACTAGCAGTATGTACAGTACATAGTCTCCTTCTTCTCCTCCTCTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009791 GO:0009889 GO:0010228 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

780

Amino Acids

86.27

Weight (kDa)

6.9

Isoelectric Point (pI)

51.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009604)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02560 AT4G02560
fragaria_vesca	FvH4_2g25100 FvH4_2g25100 FvH4_2g25100
malus_domestica	MD03G1284300.v1.1 MD11G1302000.v1.1
prunus_persica	Prupe.8G255600_v2.0.a1 Prupe.8G255600_v2.0.a1
pyrus_communis	pycom03g22510 pycom11g26460
rosa_chinensis	RchiOBHm_Chr6g0293161
rosa_laevigata	RLG00000011970
rosa_multiflora	Rmu_sc0014786.1_g000002
rosa_roxburghii	Rroxscaffold_7G00174400
rosa_rugosa	Rorug06G0233000 Rorug06G0233100
rosa_samantha	Rh6AG345700 Rh6BG353500 Rh6CG359900 Rh6DG346300
rosa_wichuraiana	Rw6G030130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	4 cut(s)	137, 427, 1636, 1966
AccB7I	CCANNNNNTGG	1 cut(s)	160
AccI	GTMKAC	2 cut(s)	60, 2273
AccII	CGCG	1 cut(s)	1740
AciI	CCGC	7 cut(s)	85, 616, 667, 865, 1253, 1738, 1970
AclI	AACGTT	1 cut(s)	1922
AclWI	GGATC	7 cut(s)	15, 342, 390, 437, 461, 503, 1031
AcoI	YGGCCR	1 cut(s)	1240
AcsI	RAATTY	3 cut(s)	31, 676, 1045
AcuI	CTGAAG	4 cut(s)	666, 1025, 1107, 1428
AcyI	GRCGYC	1 cut(s)	138
AfaI	GTAC	4 cut(s)	1458, 1873, 2308, 2313
AfiI	CCNNNNNNNGG	4 cut(s)	160, 1744, 1940, 2227
AjnI	CCWGG	4 cut(s)	942, 1632, 1672, 2221
Alw21I	GWGCWC	5 cut(s)	78, 102, 175, 1345, 1608
Alw26I	GTCTC	2 cut(s)	319, 2324
AlwI	GGATC	7 cut(s)	15, 342, 390, 437, 461, 503, 1031
Ama87I	CYCGRG	2 cut(s)	282, 2239
AoxI	GGCC	3 cut(s)	387, 1240, 1437
ApeKI	GCWGC	6 cut(s)	164, 746, 1913, 1989, 2014, 2026
ApoI	RAATTY	3 cut(s)	31, 676, 1045
ArsI	GACNNNNNNTTYG	2 cut(s)	1498, 1530
AseI	ATTAAT	2 cut(s)	183, 483
AspA2I	CCTAGG	1 cut(s)	1180
AspLEI	GCGC	2 cut(s)	140, 298
AsuC2I	CCSGG	1 cut(s)	1239
AsuHPI	GGTGA	4 cut(s)	109, 124, 1067, 1706
AvaI	CYCGRG	2 cut(s)	282, 2239
AvrII	CCTAGG	1 cut(s)	1180
BanI	GGYRCC	4 cut(s)	137, 427, 1636, 1966
BanII	GRGCYC	3 cut(s)	78, 102, 2246
BbsI	GAAGAC	3 cut(s)	1074, 1113, 1652
Bbv12I	GWGCWC	5 cut(s)	78, 102, 175, 1345, 1608
BbvI	GCAGC	6 cut(s)	176, 758, 1925, 2001, 2001, 2013
BccI	CCATC	6 cut(s)	154, 398, 541, 912, 1671, 2206
BceAI	ACGGC	2 cut(s)	1069, 1624
BcgI	CGANNNNNNTGC	2 cut(s)	754, 788
BciT130I	CCWGG	4 cut(s)	944, 1634, 1674, 2223
BciVI	GTATCC	2 cut(s)	663, 2086
BcnI	CCSGG	1 cut(s)	1239
BcoDI	GTCTC	2 cut(s)	319, 2324
BfaI	CTAG	8 cut(s)	201, 569, 1181, 1479, 2009, 2163, 2297, 2341
BfmI	CTRYAG	2 cut(s)	1026, 1452
BfoI	RGCGCY	1 cut(s)	141
BfuI	GTATCC	2 cut(s)	663, 2086
BglII	AGATCT	1 cut(s)	2005
BisI	GCNGC	7 cut(s)	165, 747, 1914, 1970, 1990, 2015, 2027
BlnI	CCTAGG	1 cut(s)	1180
BlsI	GCNGC	7 cut(s)	166, 748, 1915, 1971, 1991, 2016, 2028
Bme1390I	CCNGG	5 cut(s)	944, 1239, 1634, 1674, 2223
BmeT110I	CYCGRG	2 cut(s)	282, 2239
BmiI	GGNNCC	5 cut(s)	139, 429, 1638, 1794, 1968
BmrFI	CCNGG	5 cut(s)	944, 1239, 1634, 1674, 2223
BmsI	GCATC	5 cut(s)	250, 441, 517, 603, 1157
BpiI	GAAGAC	3 cut(s)	1074, 1113, 1652
BplI	GAGNNNNNCTC	3 cut(s)	28, 1516, 1548
BpmI	CTGGAG	3 cut(s)	86, 440, 1818
Bpu10I	CCTNAGC	1 cut(s)	1434
BpuEI	CTTGAG	1 cut(s)	1923
BpuMI	CCSGG	1 cut(s)	1239
Bsa29I	ATCGAT	1 cut(s)	93
BsaHI	GRCGYC	1 cut(s)	138
BsaJI	CCNNGG	5 cut(s)	1040, 1180, 1640, 1796, 2221
BsaXI	ACNNNNNCTCC	4 cut(s)	1561, 1591, 2304, 2334
Bsc4I	CCNNNNNNNGG	4 cut(s)	160, 1744, 1940, 2227
Bse118I	RCCGGY	1 cut(s)	134
Bse1I	ACTGG	5 cut(s)	1130, 1469, 1835, 2085, 2286
Bse3DI	GCAATG	2 cut(s)	998, 1079
BseBI	CCWGG	4 cut(s)	944, 1634, 1674, 2223
BseCI	ATCGAT	1 cut(s)	93
BseDI	CCNNGG	5 cut(s)	1040, 1180, 1640, 1796, 2221
BseGI	GGATG	6 cut(s)	532, 1071, 1176, 1193, 1682, 2198
BseLI	CCNNNNNNNGG	4 cut(s)	160, 1744, 1940, 2227
BseMI	GCAATG	2 cut(s)	998, 1079
BseMII	CTCAG	2 cut(s)	6, 1448
BseNI	ACTGG	5 cut(s)	1130, 1469, 1835, 2085, 2286
BseRI	GAGGAG	3 cut(s)	2189, 2321, 2324
BseXI	GCAGC	6 cut(s)	176, 758, 1925, 2001, 2001, 2013
BsgI	GTGCAG	2 cut(s)	1116, 1642
Bsh1236I	CGCG	1 cut(s)	1740
BshFI	GGCC	3 cut(s)	389, 1242, 1439
BshNI	GGYRCC	4 cut(s)	137, 427, 1636, 1966
BshVI	ATCGAT	1 cut(s)	93
BsiHKAI	GWGCWC	5 cut(s)	78, 102, 175, 1345, 1608
BsiHKCI	CYCGRG	2 cut(s)	282, 2239
BsiSI	CCGG	2 cut(s)	135, 1239
BslFI	GGGAC	1 cut(s)	1814
BslI	CCNNNNNNNGG	4 cut(s)	160, 1744, 1940, 2227
BsmAI	GTCTC	2 cut(s)	319, 2324
BsmFI	GGGAC	1 cut(s)	1814
BsnI	GGCC	3 cut(s)	389, 1242, 1439
BsoBI	CYCGRG	2 cut(s)	282, 2239
Bsp1286I	GDGCHC	6 cut(s)	78, 102, 175, 1345, 1608, 2246
Bsp1407I	TGTACA	1 cut(s)	2306
Bsp19I	CCATGG	1 cut(s)	1040
BspACI	CCGC	7 cut(s)	85, 616, 667, 865, 1253, 1738, 1970
BspANI	GGCC	3 cut(s)	389, 1242, 1439
BspCNI	CTCAG	2 cut(s)	7, 1447
BspDI	ATCGAT	1 cut(s)	93
BspFNI	CGCG	1 cut(s)	1740
BspLI	GGNNCC	5 cut(s)	139, 429, 1638, 1794, 1968
BspPI	GGATC	7 cut(s)	15, 342, 390, 437, 461, 503, 1031
BspQI	GCTCTTC	2 cut(s)	83, 825
BspT107I	GGYRCC	4 cut(s)	137, 427, 1636, 1966
BsrDI	GCAATG	2 cut(s)	998, 1079
BsrFI	RCCGGY	1 cut(s)	134
BsrGI	TGTACA	1 cut(s)	2306
BsrI	ACTGG	5 cut(s)	1130, 1469, 1835, 2085, 2286
BssAI	RCCGGY	1 cut(s)	134
BssECI	CCNNGG	5 cut(s)	1040, 1180, 1640, 1796, 2221
BssNAI	GTATAC	1 cut(s)	2274
BssNI	GRCGYC	1 cut(s)	138
BssT1I	CCWWGG	3 cut(s)	1040, 1180, 1796
Bst1107I	GTATAC	1 cut(s)	2274
Bst2UI	CCWGG	4 cut(s)	944, 1634, 1674, 2223
Bst4CI	ACNGT	5 cut(s)	1871, 1952, 2098, 2230, 2311
Bst6I	CTCTTC	3 cut(s)	83, 825, 2199
BstACI	GRCGYC	1 cut(s)	138
BstAPI	GCANNNNNTGC	1 cut(s)	170
BstAUI	TGTACA	1 cut(s)	2306
BstC8I	GCNNGC	8 cut(s)	128, 1300, 1341, 1441, 1742, 1987, 2019, 2070
BstDEI	CTNAG	2 cut(s)	15, 1434
BstDSI	CCRYGG	2 cut(s)	1040, 1640
BstENI	CCTNNNNNAGG	1 cut(s)	1938
BstF5I	GGATG	6 cut(s)	532, 1071, 1176, 1193, 1682, 2198
BstFNI	CGCG	1 cut(s)	1740
BstH2I	RGCGCY	1 cut(s)	141
BstHHI	GCGC	2 cut(s)	140, 298
BstMAI	GTCTC	2 cut(s)	319, 2324
BstMWI	GCNNNNNNNGC	7 cut(s)	73, 170, 2023, 2129, 2138, 2250, 2259
BstNI	CCWGG	4 cut(s)	944, 1634, 1674, 2223
BstSCI	CCNGG	5 cut(s)	942, 1237, 1632, 1672, 2221
BstSFI	CTRYAG	2 cut(s)	1026, 1452
BstUI	CGCG	1 cut(s)	1740
BstV1I	GCAGC	6 cut(s)	176, 758, 1925, 2001, 2001, 2013
BstV2I	GAAGAC	3 cut(s)	1074, 1113, 1652
BstX2I	RGATCY	3 cut(s)	7, 395, 2005
BstYI	RGATCY	3 cut(s)	7, 395, 2005
BstZ17I	GTATAC	1 cut(s)	2274
Bsu15I	ATCGAT	1 cut(s)	93
BsuI	GTATCC	2 cut(s)	663, 2086
BsuRI	GGCC	3 cut(s)	389, 1242, 1439
BsuTUI	ATCGAT	1 cut(s)	93
BtgI	CCRYGG	2 cut(s)	1040, 1640
BtgZI	GCGATG	1 cut(s)	1047
BtsCI	GGATG	6 cut(s)	532, 1071, 1176, 1193, 1682, 2198
BtsIMutI	CAGTG	6 cut(s)	298, 399, 1137, 1863, 1957, 2092
Cac8I	GCNNGC	8 cut(s)	128, 1300, 1341, 1441, 1742, 1987, 2019, 2070
CfoI	GCGC	2 cut(s)	140, 298
Cfr10I	RCCGGY	1 cut(s)	134
ClaI	ATCGAT	1 cut(s)	93
CseI	GACGC	1 cut(s)	1218
Csp6I	GTAC	4 cut(s)	1457, 1872, 2307, 2312
CviAII	CATG	3 cut(s)	732, 967, 1041
CviQI	GTAC	4 cut(s)	1457, 1872, 2307, 2312
DdeI	CTNAG	2 cut(s)	15, 1434
DinI	GGCGCC	1 cut(s)	139
DraI	TTTAAA	2 cut(s)	498, 2151
EaeI	YGGCCR	1 cut(s)	1240
Eam1104I	CTCTTC	3 cut(s)	83, 825, 2199
EarI	CTCTTC	3 cut(s)	83, 825, 2199
Ecl136II	GAGCTC	2 cut(s)	76, 100
Eco130I	CCWWGG	3 cut(s)	1040, 1180, 1796
Eco24I	GRGCYC	3 cut(s)	78, 102, 2246
Eco32I	GATATC	1 cut(s)	1321
Eco53kI	GAGCTC	2 cut(s)	76, 100
Eco57I	CTGAAG	4 cut(s)	666, 1025, 1107, 1428
Eco88I	CYCGRG	2 cut(s)	282, 2239
EcoICRI	GAGCTC	2 cut(s)	76, 100
EcoNI	CCTNNNNNAGG	1 cut(s)	1938
EcoRI	GAATTC	2 cut(s)	31, 1045
EcoRII	CCWGG	4 cut(s)	942, 1632, 1672, 2221
EcoRV	GATATC	1 cut(s)	1321
EcoT14I	CCWWGG	3 cut(s)	1040, 1180, 1796
EcoT38I	GRGCYC	3 cut(s)	78, 102, 2246
EgeI	GGCGCC	1 cut(s)	139
EheI	GGCGCC	1 cut(s)	139
ErhI	CCWWGG	3 cut(s)	1040, 1180, 1796
FaeI	CATG	3 cut(s)	735, 970, 1044
FalI	AAGNNNNNCTT	6 cut(s)	931, 963, 1059, 1091, 2178, 2210
FaqI	GGGAC	1 cut(s)	1814
FatI	CATG	3 cut(s)	731, 966, 1040
FauI	CCCGC	1 cut(s)	1246
FauNDI	CATATG	1 cut(s)	831
FblI	GTMKAC	2 cut(s)	60, 2273
Fnu4HI	GCNGC	7 cut(s)	165, 747, 1914, 1970, 1990, 2015, 2027
FokI	GGATG	6 cut(s)	539, 1058, 1163, 1180, 1689, 2185
FriOI	GRGCYC	3 cut(s)	78, 102, 2246
Fsp4HI	GCNGC	7 cut(s)	165, 747, 1914, 1970, 1990, 2015, 2027
FspBI	CTAG	8 cut(s)	201, 569, 1181, 1479, 2009, 2163, 2297, 2341
GlaI	GCGC	2 cut(s)	139, 297
GluI	GCNGC	7 cut(s)	165, 747, 1914, 1970, 1990, 2015, 2027
GsuI	CTGGAG	3 cut(s)	86, 440, 1818
HaeII	RGCGCY	1 cut(s)	141
HaeIII	GGCC	3 cut(s)	389, 1242, 1439
HapII	CCGG	2 cut(s)	135, 1239
HgaI	GACGC	1 cut(s)	1218
HhaI	GCGC	2 cut(s)	140, 298
Hin1I	GRCGYC	1 cut(s)	138
Hin1II	CATG	3 cut(s)	735, 970, 1044
Hin6I	GCGC	2 cut(s)	138, 296
HinP1I	GCGC	2 cut(s)	138, 296
HincII	GTYRAC	4 cut(s)	61, 344, 738, 1063
HindII	GTYRAC	4 cut(s)	61, 344, 738, 1063
HpaI	GTTAAC	1 cut(s)	1063
HpaII	CCGG	2 cut(s)	135, 1239
HphI	GGTGA	4 cut(s)	109, 124, 1067, 1706
Hpy166II	GTNNAC	9 cut(s)	61, 344, 738, 1063, 1265, 1417, 1547, 1948, 2274
Hpy188I	TCNGA	6 cut(s)	16, 395, 442, 466, 1126, 1156
Hpy8I	GTNNAC	9 cut(s)	61, 344, 738, 1063, 1265, 1417, 1547, 1948, 2274
Hpy99I	CGWCG	3 cut(s)	41, 62, 116
HpyCH4III	ACNGT	5 cut(s)	1871, 1952, 2098, 2230, 2311
HpyCH4IV	ACGT	2 cut(s)	576, 1922
HpyF10VI	GCNNNNNNNGC	7 cut(s)	73, 170, 2023, 2129, 2138, 2250, 2259
HpyF3I	CTNAG	2 cut(s)	15, 1434
HpySE526I	ACGT	2 cut(s)	576, 1922
Hsp92I	GRCGYC	1 cut(s)	138
Hsp92II	CATG	3 cut(s)	735, 970, 1044
HspAI	GCGC	2 cut(s)	138, 296
KasI	GGCGCC	1 cut(s)	137
KspAI	GTTAAC	1 cut(s)	1063
LguI	GCTCTTC	2 cut(s)	83, 825
LmnI	GCTCC	5 cut(s)	73, 105, 921, 1582, 1603
Lsp1109I	GCAGC	6 cut(s)	176, 758, 1925, 2001, 2001, 2013
LweI	GCATC	5 cut(s)	250, 441, 517, 603, 1157
MaeI	CTAG	8 cut(s)	201, 569, 1181, 1479, 2009, 2163, 2297, 2341
MaeII	ACGT	2 cut(s)	576, 1922
MaeIII	GTNAC	5 cut(s)	115, 727, 1504, 2075, 2234
MfeI	CAATTG	1 cut(s)	1223
MflI	RGATCY	3 cut(s)	7, 395, 2005
MhlI	GDGCHC	6 cut(s)	78, 102, 175, 1345, 1608, 2246
Mly113I	GGCGCC	1 cut(s)	138
MlyI	GAGTC	6 cut(s)	50, 56, 1127, 1638, 1817, 1825
MmeI	TCCRAC	1 cut(s)	1666
MslI	CAYNNNNRTG	1 cut(s)	1808
MspA1I	CMGCKG	4 cut(s)	167, 749, 1253, 1997
MspI	CCGG	2 cut(s)	135, 1239
MspR9I	CCNGG	5 cut(s)	944, 1239, 1634, 1674, 2223
MunI	CAATTG	1 cut(s)	1223
MvaI	CCWGG	4 cut(s)	944, 1634, 1674, 2223
MvnI	CGCG	1 cut(s)	1740
MwoI	GCNNNNNNNGC	7 cut(s)	73, 170, 2023, 2129, 2138, 2250, 2259
NarI	GGCGCC	1 cut(s)	138
NciI	CCSGG	1 cut(s)	1239
NcoI	CCATGG	1 cut(s)	1040
NdeI	CATATG	1 cut(s)	831
NlaIII	CATG	3 cut(s)	735, 970, 1044
NlaIV	GGNNCC	5 cut(s)	139, 429, 1638, 1794, 1968
NmuCI	GTSAC	2 cut(s)	115, 1504
PciSI	GCTCTTC	2 cut(s)	83, 825
PfeI	GAWTC	4 cut(s)	278, 983, 1160, 1490
PflMI	CCANNNNNTGG	1 cut(s)	160
PfoI	TCCNGGA	1 cut(s)	1672
PkrI	GCNGC	7 cut(s)	166, 748, 1915, 1971, 1991, 2016, 2028
PleI	GAGTC	6 cut(s)	49, 56, 1126, 1637, 1817, 1825
PluTI	GGCGCC	1 cut(s)	141
PpsI	GAGTC	6 cut(s)	49, 56, 1126, 1637, 1817, 1825
PshBI	ATTAAT	2 cut(s)	183, 483
Psp124BI	GAGCTC	2 cut(s)	78, 102
Psp1406I	AACGTT	1 cut(s)	1922
Psp6I	CCWGG	4 cut(s)	942, 1632, 1672, 2221
PspGI	CCWGG	4 cut(s)	942, 1632, 1672, 2221
PspN4I	GGNNCC	5 cut(s)	139, 429, 1638, 1794, 1968
PsrI	GAACNNNNNNTAC	2 cut(s)	1449, 1481
PsuI	RGATCY	3 cut(s)	7, 395, 2005
PvuII	CAGCTG	3 cut(s)	167, 749, 1997
RsaI	GTAC	4 cut(s)	1458, 1873, 2308, 2313
RsaNI	GTAC	4 cut(s)	1457, 1872, 2307, 2312
RseI	CAYNNNNRTG	1 cut(s)	1808
SacI	GAGCTC	2 cut(s)	78, 102
SalI	GTCGAC	1 cut(s)	59
SapI	GCTCTTC	2 cut(s)	83, 825
SatI	GCNGC	7 cut(s)	165, 747, 1914, 1970, 1990, 2015, 2027
SchI	GAGTC	6 cut(s)	50, 56, 1127, 1638, 1817, 1825
ScrFI	CCNGG	5 cut(s)	944, 1239, 1634, 1674, 2223
SduI	GDGCHC	6 cut(s)	78, 102, 175, 1345, 1608, 2246
SfaNI	GCATC	5 cut(s)	250, 441, 517, 603, 1157
SfcI	CTRYAG	2 cut(s)	1026, 1452
SfoI	GGCGCC	1 cut(s)	139
SgrAI	CRCCGGYG	1 cut(s)	134
SmiI	ATTTAAAT	1 cut(s)	2151
SmiMI	CAYNNNNRTG	1 cut(s)	1808
SmlI	CTYRAG	1 cut(s)	1938
SmoI	CTYRAG	1 cut(s)	1938
SsiI	CCGC	7 cut(s)	85, 616, 667, 865, 1253, 1738, 1970
SspDI	GGCGCC	1 cut(s)	137
SspI	AATATT	2 cut(s)	187, 601
SspMI	CTAG	8 cut(s)	201, 569, 1181, 1479, 2009, 2163, 2297, 2341
SstI	GAGCTC	2 cut(s)	78, 102
StyD4I	CCNGG	5 cut(s)	942, 1237, 1632, 1672, 2221
StyI	CCWWGG	3 cut(s)	1040, 1180, 1796
SwaI	ATTTAAAT	1 cut(s)	2151
TaaI	ACNGT	5 cut(s)	1871, 1952, 2098, 2230, 2311
TaiI	ACGT	2 cut(s)	579, 1925
TaqI	TCGA	5 cut(s)	39, 60, 93, 890, 1897
TatI	WGTACW	3 cut(s)	1871, 2306, 2311
TauI	GCSGC	1 cut(s)	1972
TfiI	GAWTC	4 cut(s)	278, 983, 1160, 1490
TscAI	CASTG	6 cut(s)	298, 406, 1137, 1870, 1957, 2092
TseFI	GTSAC	2 cut(s)	115, 1504
TseI	GCWGC	6 cut(s)	164, 746, 1913, 1989, 2014, 2026
Tsp45I	GTSAC	2 cut(s)	115, 1504
TspDTI	ATGAA	7 cut(s)	768, 818, 983, 1035, 1182, 1401, 1613
TspGWI	ACGGA	4 cut(s)	25, 232, 501, 1607
TspRI	CASTG	6 cut(s)	298, 406, 1137, 1870, 1957, 2092
Van91I	CCANNNNNTGG	1 cut(s)	160
VspI	ATTAAT	2 cut(s)	183, 483
XagI	CCTNNNNNAGG	1 cut(s)	1938
XapI	RAATTY	3 cut(s)	31, 676, 1045
XbaI	TCTAGA	1 cut(s)	2008
XmaJI	CCTAGG	1 cut(s)	1180
XmiI	GTMKAC	2 cut(s)	60, 2273
XspI	CTAG	8 cut(s)	201, 569, 1181, 1479, 2009, 2163, 2297, 2341

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.