Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0009604

Physical Location & Seq

Genomic Coordinates Forward (+)

21823646 .. 21831444

Gene Structure 7799 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G255600.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2946 bp

ATGGAGGATCTTTCGGAGATGGAGATTGGGAGCTCCGTGGAGTCGTTCCAGAAGTTCTTGGACTCGCAGAGGCAGCTATTCCACAGTCAGATCGATCAGCTTCAGAAAGTTGTTGTCACCCAATGCAATCTCACCGGCGTCAATCCGCTCTCCCAAGAGATGGCAGCTGGTGCTCTTTCTGTTAAGATTGATGGTCCATTTGCAGGAAAAAGACCTAGAGATTTGTTAAATCCAAAAGCTATAAAGTATATGCAATCTGTTTTTTCTATTAAGGATGCAATTAGCAAGAAGGAGTCCCGTGAGCTCAGTGCTCTATTCGGCGTTACAGGCACACAGGTTCGTGATTTTTTTAATAGTCAACGGTCGAGAGTTAGAAAACTAGTCCAGTTGTCAAGGGAAAAGGCTACGAGATCCAGTGAACATAAAGAATTGCAGGATGGGGTCTCAACAAGCTCTGACCCTCTGACACCAATTGATCCGGTTCCCTTAAATTCTGTTGGTCCCTCCAGTGTCGAAGATGCACCATCTTGCTCAACTCAAGATGATGCTCTTTCTGGATTAGACGACTTAGATAAACATTTTGTAGACAACATTTTCAACTTGATGCGGAAAGAAGAAACGTTTTCTGGGCAAGAGAAACTGATGGAGTGGATATTGCAGATACAAAATTCTTCAGTATTATGTTGGTTTTTAAATACAGGTGGTGTCATGATTTTAGCAACATGGTTGAGTCAAGCAGCCATTGAAGAACAAACAAGTGTTCTCCTTGTCATCTTAAAGGTTCTTTGTCATTTGCCTTTACATAAAGCTCTTCCTGTGCATATGTCAGCCATACTGCAAAGTGTTAATAGACTGCGGTTTTACAGGACAGCAGACGTATCAAACAGGGCAAGAGTTTTGCTATCAAGATGGAGCAAGTTATTAGCAAGAATCCAAAATATGAAGAAACCAAATGGCATGAAAACATCTAGTGACTCGCAACACGAATTAGTAATGCTGAAGCAGAGTATTGATGAAGTTATGGGTGATGAATCATGGAAGTCAAACATTGATATTCCTGAAGACATCTTTGCAACGCCTTTTGAAAATGCAGAGAATTCCAGGAGATCAGAGGCTTCAGAACCATTGAAGCTATTGACAGCATCATCGGATGAGTCAAATAAGAAGCAGATCCTAGGTGTATCTTCATCTCAATTTCGAGCACGCAGAAAAGTTCAGTTGGTGGAACAGCCTGGCCAAAAATCAGCTGGGAGAAGTGTACAGGTCACAAGGGCAACACCTGTGAGTAAGGGTCGTCCAATGTCTGCTGATGATATCCAAAAAGCAAAAATGCGGGCACAATTTATGCAGAGCAAATATGGGAAATCTGGTTCATCTAATGAAAATAAAGAACTGAAGACCGAAGGTGGGAACAAACTTTCAACCTCTCAGGACAGCATTTTGCCTGTGGTACCTAAAGTTCCAGTTCGGCCTAATATTGAGGAACCCAAGAAACCTGTGACACTTCTTTTGAAAGAGAGGGAAACTCCTAATAGGCTGGAAACTTCTCTTGCTCCAAAGCTGAGAATGGATTTGAAGGAGTCCATATTGGAGAAGTGCCAGAGAATCCGGGTCCCGTGGAAGACACCGCCAGAAATAAAACTGGACCCTGAATGGAGGGTCGGTGGTGGTGAGAACGGCAAAGAAATTGAAGTCCAGAGAAACAGAAACCACCGCGAGAAGGAAACTATCTACCAGAGAGTCCAGGACATACCATCTAACCCCAAGGAACCATGGGACATTGAAATGGACTATGATGATTCATTGACCCCAGAGATACCAATAGAACAGCCCCCTGATGCTGACGGCACTGAAACACATTCCCTAAGTAGAGAAGGAAACAATGCACAAACATGGGTTGCTTCTTCTCAAGGAGTAAACAGTGCTGCTTCTTTGGCACCCGCCTTGTCTCAAATGAATGGTGCAAGCGCAGCAGCCGAACCCGATCTCGAGTTGCTTGCTGTACTGCTAAAAAACCCAGAATTGGTGTTTGCCTTGACTTCTGGGCAGGCTGCTAACTTGTCAAGCGAAGATACAGTAAAACTGCTGGATATGATTAAGTCTGGGGGGGCTGGTAATTTAAATGGGTTAGGTAGAAAAATGGAGCAGAGGGTGGAAGTTTCTCTTCCATCCCCAACACCTTCGAGCAATCCTGGAACGAGTGGATGGAGAGCAGATGCTGGAAGGAATGCATTTCCACAACAAATGGCGACCACCAACAACAGCTCAGTTTCGTCATCTGTACATATGATTCCATCACAACGGCTATCAACTTCCCAACCAGCAGTGCCGTCATACTCGCCAGACTACTTTCCTCCCTCTATGCAAACACCAGCAGCGTCAGAGATGGTTTTAACCATGAAGAACACACACTTGAACAACTTATCTAACTCATATAATGTAGCAGAAAGGCAGCCAAATTCATTCCCAACGCCCTTGGTTTCCACTCCGGCACGGCAGCAAAGGCAGCCGCAACCGCTGCAGCAACCCCGTTTTTCGGAGCCTCGCCTCCCCACACATATGTACCCATCTAAACCACAAATGGGAAAACCAGGCCCTCCTCCTCCATCTGATTCATGGAGAGCCAGGCAGGATGTGCCCTCAAACTACCATTACTTAGAGAACCAAAATCAGTATAATGCATCACATGGAGGACCTTTGCAGCAGCCTCAGTTGTTGCCAGGTCCTTCTTGGGAACGAAATGAACACGTGGGTGGCAACCAAGACTTCGAATCATGGAGTCCGGACAATAGTCCAACTAGAAACCCTGGGTATATGTACGGAAGAGAACCCAGAATGAATCCCGCACGGGATTACATGCCTGACAGGTCGAGGCAAATGAATCCTTCTGGATACGGAGGCCAAAACAGGCTTGGAAACAGGTGGCCGGACCGCGGCAGACACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009791 GO:0009889 GO:0010228 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

982

Amino Acids

109.17

Weight (kDa)

8.59

Isoelectric Point (pI)

57.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009604)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02560 AT4G02560
fragaria_vesca	FvH4_2g25100 FvH4_2g25100 FvH4_2g25100
malus_domestica	MD03G1284300.v1.1 MD11G1302000.v1.1
prunus_persica	Prupe.8G255600_v2.0.a1 Prupe.8G255600_v2.0.a1
pyrus_communis	pycom03g22510 pycom11g26460
rosa_chinensis	RchiOBHm_Chr6g0293161
rosa_laevigata	RLG00000011970
rosa_multiflora	Rmu_sc0014786.1_g000002
rosa_roxburghii	Rroxscaffold_7G00174400
rosa_rugosa	Rorug06G0233000 Rorug06G0233100
rosa_samantha	Rh6AG345700 Rh6BG353500 Rh6CG359900 Rh6DG346300
rosa_wichuraiana	Rw6G030130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1450
AccB1I	GGYRCC	2 cut(s)	1450, 1936
AccB7I	CCANNNNNTGG	1 cut(s)	160
AccBSI	CCGCTC	1 cut(s)	148
AccI	GTMKAC	1 cut(s)	585
AccII	CGCG	2 cut(s)	1716, 2934
AccIII	TCCGGA	1 cut(s)	2782
AclI	AACGTT	1 cut(s)	620
AclWI	GGATC	4 cut(s)	15, 405, 470, 1165
AcoI	YGGCCR	2 cut(s)	1234, 2924
AcsI	RAATTY	4 cut(s)	490, 667, 1096, 2458
AcuI	CTGAAG	6 cut(s)	86, 657, 1019, 1080, 1101, 1415
AcvI	CACGTG	1 cut(s)	2749
AcyI	GRCGYC	1 cut(s)	138
AfaI	GTAC	6 cut(s)	1260, 1452, 2004, 2283, 2564, 2819
AfiI	CCNNNNNNNGG	8 cut(s)	160, 203, 1407, 1720, 2023, 2536, 2582, 2933
AflIII	ACRYGT	1 cut(s)	2746
AhlI	ACTAGT	1 cut(s)	379
AjnI	CCWGG	8 cut(s)	1100, 1231, 1743, 2191, 2590, 2624, 2719, 2806
AleI	CACNNNNGTG	1 cut(s)	2751
AloI	GAACNNNNNNTCC	2 cut(s)	1354, 1386
Alw21I	GWGCWC	5 cut(s)	35, 175, 306, 313, 1204
Alw26I	GTCTC	2 cut(s)	448, 1953
AlwI	GGATC	4 cut(s)	15, 405, 470, 1165
AlwNI	CAGNNNCTG	2 cut(s)	2219, 2943
Ama87I	CYCGRG	1 cut(s)	1988
Aor13HI	TCCGGA	1 cut(s)	2782
AoxI	GGCC	5 cut(s)	1234, 1469, 2593, 2899, 2924
ApoI	RAATTY	4 cut(s)	490, 667, 1096, 2458
ArsI	GACNNNNNNTTYG	2 cut(s)	1492, 1524
Asp718I	GGTACC	1 cut(s)	1450
AspA2I	CCTAGG	1 cut(s)	1174
AspLEI	GCGC	1 cut(s)	1970
AspS9I	GGNCC	8 cut(s)	194, 500, 1612, 1645, 2594, 2693, 2723, 2929
AsuC2I	CCSGG	1 cut(s)	1610
AsuHPI	GGTGA	4 cut(s)	109, 124, 1037, 1682
AsuII	TTCGAA	1 cut(s)	2769
AvaI	CYCGRG	1 cut(s)	1988
AvaII	GGWCC	7 cut(s)	194, 500, 1612, 1645, 2693, 2723, 2929
AvrII	CCTAGG	1 cut(s)	1174
BaeGI	GKGCMC	2 cut(s)	1339, 2640
BaeI	ACNNNNGTAYC	2 cut(s)	2546, 2579
BalI	TGGCCA	1 cut(s)	1236
BanI	GGYRCC	2 cut(s)	1450, 1936
BanII	GRGCYC	2 cut(s)	35, 306
BbrPI	CACGTG	1 cut(s)	2749
BbsI	GAAGAC	3 cut(s)	1068, 1403, 1628
Bbv12I	GWGCWC	5 cut(s)	35, 175, 306, 313, 1204
BceAI	ACGGC	5 cut(s)	1693, 1861, 2314, 2318, 2510
BcgI	CGANNNNNNTGC	2 cut(s)	1979, 2013
BciT130I	CCWGG	8 cut(s)	1102, 1233, 1745, 2193, 2592, 2626, 2721, 2808
BciVI	GTATCC	1 cut(s)	2885
BcnI	CCSGG	1 cut(s)	1610
BcoDI	GTCTC	2 cut(s)	448, 1953
BcuI	ACTAGT	1 cut(s)	379
BfaI	CTAG	5 cut(s)	216, 380, 969, 1175, 2799
BfmI	CTRYAG	1 cut(s)	2519
BfuI	GTATCC	1 cut(s)	2885
BlnI	CCTAGG	1 cut(s)	1174
Bme1390I	CCNGG	9 cut(s)	1102, 1233, 1610, 1745, 2193, 2592, 2626, 2721, 2808
Bme18I	GGWCC	7 cut(s)	194, 500, 1612, 1645, 2693, 2723, 2929
BmeT110I	CYCGRG	1 cut(s)	1988
BmgT120I	GGNCC	8 cut(s)	194, 500, 1612, 1645, 2594, 2693, 2723, 2929
BmrFI	CCNGG	9 cut(s)	1102, 1233, 1610, 1745, 2193, 2592, 2626, 2721, 2808
BmsI	GCATC	8 cut(s)	265, 508, 535, 594, 1151, 1828, 2206, 2690
BoxI	GACNNNNGTC	1 cut(s)	2790
BpiI	GAAGAC	3 cut(s)	1068, 1403, 1628
BplI	GAGNNNNNCTC	2 cut(s)	1510, 1542
BpmI	CTGGAG	1 cut(s)	490
Bpu14I	TTCGAA	1 cut(s)	2769
BpuEI	CTTGAG	2 cut(s)	522, 1893
BpuMI	CCSGG	1 cut(s)	1610
Bsa29I	ATCGAT	1 cut(s)	93
BsaAI	YACGTR	1 cut(s)	2749
BsaHI	GRCGYC	1 cut(s)	138
BsaI	GGTCTC	1 cut(s)	448
BsaJI	CCNNGG	9 cut(s)	36, 1174, 1616, 1764, 1772, 2475, 2806, 2807, 2932
BsaWI	WCCGGW	2 cut(s)	478, 2782
BsaXI	ACNNNNNCTCC	2 cut(s)	1648, 1678
Bsc4I	CCNNNNNNNGG	8 cut(s)	160, 203, 1407, 1720, 2023, 2536, 2582, 2933
Bse118I	RCCGGY	1 cut(s)	134
Bse1I	ACTGG	5 cut(s)	385, 414, 507, 1463, 1647
BseAI	TCCGGA	1 cut(s)	2782
BseBI	CCWGG	8 cut(s)	1102, 1233, 1745, 2193, 2592, 2626, 2721, 2808
BseCI	ATCGAT	1 cut(s)	93
BseDI	CCNNGG	9 cut(s)	36, 1174, 1616, 1764, 1772, 2475, 2806, 2807, 2932
BseGI	GGATG	6 cut(s)	280, 442, 1156, 2168, 2210, 2638
BseLI	CCNNNNNNNGG	8 cut(s)	160, 203, 1407, 1720, 2023, 2536, 2582, 2933
BseMII	CTCAG	5 cut(s)	319, 1442, 1553, 2280, 2723
BseNI	ACTGG	5 cut(s)	385, 414, 507, 1463, 1647
BseRI	GAGGAG	2 cut(s)	2589, 2592
BseSI	GKGCMC	2 cut(s)	1339, 2640
BseYI	CCCAGC	1 cut(s)	1247
Bsh1236I	CGCG	2 cut(s)	1716, 2934
Bsh1285I	CGRYCG	1 cut(s)	365
BshFI	GGCC	5 cut(s)	1236, 1471, 2595, 2901, 2926
BshNI	GGYRCC	2 cut(s)	1450, 1936
BshVI	ATCGAT	1 cut(s)	93
BsiEI	CGRYCG	1 cut(s)	365
BsiHKAI	GWGCWC	5 cut(s)	35, 175, 306, 313, 1204
BsiHKCI	CYCGRG	1 cut(s)	1988
BsiSI	CCGG	6 cut(s)	135, 479, 1609, 2489, 2783, 2927
BslFI	GGGAC	4 cut(s)	280, 486, 1598, 1790
BslI	CCNNNNNNNGG	8 cut(s)	160, 203, 1407, 1720, 2023, 2536, 2582, 2933
BsmAI	GTCTC	2 cut(s)	448, 1953
BsmFI	GGGAC	4 cut(s)	280, 486, 1598, 1790
BsmI	GAATGC	1 cut(s)	2233
BsnI	GGCC	5 cut(s)	1236, 1471, 2595, 2901, 2926
Bso31I	GGTCTC	1 cut(s)	448
BsoBI	CYCGRG	1 cut(s)	1988
Bsp119I	TTCGAA	1 cut(s)	2769
Bsp1286I	GDGCHC	7 cut(s)	35, 175, 306, 313, 1204, 1339, 2640
Bsp13I	TCCGGA	1 cut(s)	2782
Bsp1407I	TGTACA	2 cut(s)	1258, 2281
Bsp143I	GATC	8 cut(s)	7, 90, 94, 410, 475, 1106, 1170, 1984
Bsp19I	CCATGG	1 cut(s)	1772
BspANI	GGCC	5 cut(s)	1236, 1471, 2595, 2901, 2926
BspCNI	CTCAG	5 cut(s)	318, 1441, 1554, 2279, 2722
BspDI	ATCGAT	1 cut(s)	93
BspEI	TCCGGA	1 cut(s)	2782
BspFNI	CGCG	2 cut(s)	1716, 2934
BspHI	TCATGA	1 cut(s)	708
BspMAI	CTGCAG	1 cut(s)	2523
BspPI	GGATC	4 cut(s)	15, 405, 470, 1165
BspQI	GCTCTTC	1 cut(s)	816
BspT104I	TTCGAA	1 cut(s)	2769
BspT107I	GGYRCC	2 cut(s)	1450, 1936
BspTNI	GGTCTC	1 cut(s)	448
BsrBI	CCGCTC	1 cut(s)	148
BsrFI	RCCGGY	1 cut(s)	134
BsrGI	TGTACA	2 cut(s)	1258, 2281
BsrI	ACTGG	5 cut(s)	385, 414, 507, 1463, 1647
BssAI	RCCGGY	1 cut(s)	134
BssECI	CCNNGG	9 cut(s)	36, 1174, 1616, 1764, 1772, 2475, 2806, 2807, 2932
BssMI	GATC	8 cut(s)	7, 90, 94, 410, 475, 1106, 1170, 1984
BssNI	GRCGYC	1 cut(s)	138
BssT1I	CCWWGG	4 cut(s)	1174, 1764, 1772, 2475
Bst2UI	CCWGG	8 cut(s)	1102, 1233, 1745, 2193, 2592, 2626, 2721, 2808
Bst4CI	ACNGT	4 cut(s)	86, 363, 1922, 2077
Bst6I	CTCTTC	3 cut(s)	816, 2169, 2818
BstACI	GRCGYC	1 cut(s)	138
BstAPI	GCANNNNNTGC	3 cut(s)	170, 2518, 2635
BstAUI	TGTACA	2 cut(s)	1258, 2281
BstBAI	YACGTR	1 cut(s)	2749
BstBI	TTCGAA	1 cut(s)	2769
BstC8I	GCNNGC	5 cut(s)	1204, 1335, 1966, 1998, 2049
BstDEI	CTNAG	8 cut(s)	305, 568, 1428, 1562, 1865, 2266, 2656, 2709
BstDSI	CCRYGG	4 cut(s)	36, 1616, 1772, 2932
BstF5I	GGATG	6 cut(s)	280, 442, 1156, 2168, 2210, 2638
BstFNI	CGCG	2 cut(s)	1716, 2934
BstHHI	GCGC	1 cut(s)	1970
BstKTI	GATC	8 cut(s)	10, 93, 97, 413, 478, 1109, 1173, 1987
BstMAI	GTCTC	2 cut(s)	448, 1953
BstMBI	GATC	8 cut(s)	7, 90, 94, 410, 475, 1106, 1170, 1984
BstMCI	CGRYCG	1 cut(s)	365
BstNI	CCWGG	8 cut(s)	1102, 1233, 1745, 2193, 2592, 2626, 2721, 2808
BstNSI	RCATGY	1 cut(s)	2860
BstPAI	GACNNNNGTC	1 cut(s)	2790
BstSCI	CCNGG	9 cut(s)	1100, 1231, 1608, 1743, 2191, 2590, 2624, 2719, 2806
BstSFI	CTRYAG	1 cut(s)	2519
BstSLI	GKGCMC	2 cut(s)	1339, 2640
BstUI	CGCG	2 cut(s)	1716, 2934
BstV2I	GAAGAC	3 cut(s)	1068, 1403, 1628
BstX2I	RGATCY	3 cut(s)	7, 410, 1170
BstYI	RGATCY	3 cut(s)	7, 410, 1170
Bsu15I	ATCGAT	1 cut(s)	93
BsuI	GTATCC	1 cut(s)	2885
BsuRI	GGCC	5 cut(s)	1236, 1471, 2595, 2901, 2926
BsuTUI	ATCGAT	1 cut(s)	93
BtgI	CCRYGG	4 cut(s)	36, 1616, 1772, 2932
BtsCI	GGATG	6 cut(s)	280, 442, 1156, 2168, 2210, 2638
BtsI	GCAGTG	1 cut(s)	2331
BtsIMutI	CAGTG	7 cut(s)	313, 421, 514, 1848, 1927, 2331, 2941
Cac8I	GCNNGC	5 cut(s)	1204, 1335, 1966, 1998, 2049
CaiI	CAGNNNCTG	2 cut(s)	2219, 2943
CciI	TCATGA	1 cut(s)	708
CfoI	GCGC	1 cut(s)	1970
Cfr10I	RCCGGY	1 cut(s)	134
Cfr13I	GGNCC	8 cut(s)	194, 500, 1612, 1645, 2594, 2693, 2723, 2929
Cfr42I	CCGCGG	1 cut(s)	2935
ClaI	ATCGAT	1 cut(s)	93
CpoI	CGGWCCG	1 cut(s)	2929
CseI	GACGC	2 cut(s)	127, 2367
Csp6I	GTAC	6 cut(s)	1259, 1451, 2003, 2282, 2563, 2818
CspI	CGGWCCG	1 cut(s)	2929
CviQI	GTAC	6 cut(s)	1259, 1451, 2003, 2282, 2563, 2818
DdeI	CTNAG	8 cut(s)	305, 568, 1428, 1562, 1865, 2266, 2656, 2709
DpnI	GATC	8 cut(s)	9, 92, 96, 412, 477, 1108, 1172, 1986
DpnII	GATC	8 cut(s)	7, 90, 94, 410, 475, 1106, 1170, 1984
DraI	TTTAAA	2 cut(s)	693, 2121
EaeI	YGGCCR	2 cut(s)	1234, 2924
Eam1104I	CTCTTC	3 cut(s)	816, 2169, 2818
EarI	CTCTTC	3 cut(s)	816, 2169, 2818
Ecl136II	GAGCTC	2 cut(s)	33, 304
Eco130I	CCWWGG	4 cut(s)	1174, 1764, 1772, 2475
Eco24I	GRGCYC	2 cut(s)	35, 306
Eco31I	GGTCTC	1 cut(s)	448
Eco32I	GATATC	1 cut(s)	1315
Eco47I	GGWCC	7 cut(s)	194, 500, 1612, 1645, 2693, 2723, 2929
Eco53kI	GAGCTC	2 cut(s)	33, 304
Eco57I	CTGAAG	6 cut(s)	86, 657, 1019, 1080, 1101, 1415
Eco72I	CACGTG	1 cut(s)	2749
Eco88I	CYCGRG	1 cut(s)	1988
EcoICRI	GAGCTC	2 cut(s)	33, 304
EcoO109I	RGGNCCY	4 cut(s)	1612, 2594, 2693, 2723
EcoRI	GAATTC	1 cut(s)	1096
EcoRII	CCWGG	8 cut(s)	1100, 1231, 1743, 2191, 2590, 2624, 2719, 2806
EcoRV	GATATC	1 cut(s)	1315
EcoT14I	CCWWGG	4 cut(s)	1174, 1764, 1772, 2475
EcoT22I	ATGCAT	2 cut(s)	2233, 2683
EcoT38I	GRGCYC	2 cut(s)	35, 306
ErhI	CCWWGG	4 cut(s)	1174, 1764, 1772, 2475
FalI	AAGNNNNNCTT	2 cut(s)	2148, 2180
FaqI	GGGAC	4 cut(s)	280, 486, 1598, 1790
FauI	CCCGC	3 cut(s)	1326, 1948, 2851
FauNDI	CATATG	3 cut(s)	822, 2286, 2559
FblI	GTMKAC	1 cut(s)	585
FokI	GGATG	6 cut(s)	287, 449, 1163, 2155, 2217, 2645
FriOI	GRGCYC	2 cut(s)	35, 306
FspBI	CTAG	5 cut(s)	216, 380, 969, 1175, 2799
GlaI	GCGC	1 cut(s)	1969
GsaI	CCCAGC	1 cut(s)	1251
GsuI	CTGGAG	1 cut(s)	490
HaeIII	GGCC	5 cut(s)	1236, 1471, 2595, 2901, 2926
HapII	CCGG	6 cut(s)	135, 479, 1609, 2489, 2783, 2927
HgaI	GACGC	2 cut(s)	127, 2367
HhaI	GCGC	1 cut(s)	1970
Hin1I	GRCGYC	1 cut(s)	138
Hin6I	GCGC	1 cut(s)	1968
HinP1I	GCGC	1 cut(s)	1968
HincII	GTYRAC	1 cut(s)	359
HindII	GTYRAC	1 cut(s)	359
HpaII	CCGG	6 cut(s)	135, 479, 1609, 2489, 2783, 2927
HphI	GGTGA	4 cut(s)	109, 124, 1037, 1682
Hpy166II	GTNNAC	5 cut(s)	359, 419, 586, 1259, 1918
Hpy8I	GTNNAC	5 cut(s)	359, 419, 586, 1259, 1918
HpyAV	CCTTC	9 cut(s)	283, 1397, 1570, 1714, 1868, 2190, 2217, 2736, 2895
HpyCH4III	ACNGT	4 cut(s)	86, 363, 1922, 2077
HpyCH4IV	ACGT	3 cut(s)	620, 876, 2748
HpyF3I	CTNAG	8 cut(s)	305, 568, 1428, 1562, 1865, 2266, 2656, 2709
HpySE526I	ACGT	3 cut(s)	620, 876, 2748
Hsp92I	GRCGYC	1 cut(s)	138
HspAI	GCGC	1 cut(s)	1968
KflI	GGGWCCC	1 cut(s)	1612
Kpn2I	TCCGGA	1 cut(s)	2782
KpnI	GGTACC	1 cut(s)	1454
KspI	CCGCGG	1 cut(s)	2935
Kzo9I	GATC	8 cut(s)	7, 90, 94, 410, 475, 1106, 1170, 1984
LguI	GCTCTTC	1 cut(s)	816
LmnI	GCTCC	6 cut(s)	30, 38, 912, 1558, 2143, 2539
LweI	GCATC	8 cut(s)	265, 508, 535, 594, 1151, 1828, 2206, 2690
MaeI	CTAG	5 cut(s)	216, 380, 969, 1175, 2799
MaeII	ACGT	3 cut(s)	620, 876, 2748
MaeIII	GTNAC	5 cut(s)	115, 322, 971, 1264, 1498
MalI	GATC	8 cut(s)	9, 92, 96, 412, 477, 1108, 1172, 1986
MbiI	CCGCTC	1 cut(s)	148
MboI	GATC	8 cut(s)	7, 90, 94, 410, 475, 1106, 1170, 1984
MfeI	CAATTG	1 cut(s)	471
MflI	RGATCY	3 cut(s)	7, 410, 1170
MhlI	GDGCHC	7 cut(s)	35, 175, 306, 313, 1204, 1339, 2640
MlsI	TGGCCA	1 cut(s)	1236
MluNI	TGGCCA	1 cut(s)	1236
MlyI	GAGTC	9 cut(s)	50, 56, 302, 739, 968, 1163, 1589, 1749, 2788
MmeI	TCCRAC	1 cut(s)	2819
Mox20I	TGGCCA	1 cut(s)	1236
Mph1103I	ATGCAT	2 cut(s)	2233, 2683
MroI	TCCGGA	1 cut(s)	2782
MscI	TGGCCA	1 cut(s)	1236
MslI	CAYNNNNRTG	4 cut(s)	1784, 1891, 2558, 2751
Msp20I	TGGCCA	1 cut(s)	1236
MspA1I	CMGCKG	4 cut(s)	167, 1247, 2518, 2934
MspI	CCGG	6 cut(s)	135, 479, 1609, 2489, 2783, 2927
MspR9I	CCNGG	9 cut(s)	1102, 1233, 1610, 1745, 2193, 2592, 2626, 2721, 2808
MunI	CAATTG	1 cut(s)	471
Mva1269I	GAATGC	1 cut(s)	2233
MvaI	CCWGG	8 cut(s)	1102, 1233, 1745, 2193, 2592, 2626, 2721, 2808
MvnI	CGCG	2 cut(s)	1716, 2934
NciI	CCSGG	1 cut(s)	1610
NcoI	CCATGG	1 cut(s)	1772
NdeI	CATATG	3 cut(s)	822, 2286, 2559
NdeII	GATC	8 cut(s)	7, 90, 94, 410, 475, 1106, 1170, 1984
NmuCI	GTSAC	4 cut(s)	115, 971, 1264, 1498
NsiI	ATGCAT	2 cut(s)	2233, 2683
NspI	RCATGY	1 cut(s)	2860
NspV	TTCGAA	1 cut(s)	2769
OliI	CACNNNNGTG	1 cut(s)	2751
PaeR7I	CTCGAG	1 cut(s)	1988
PagI	TCATGA	1 cut(s)	708
PasI	CCCWGGG	1 cut(s)	2807
PciSI	GCTCTTC	1 cut(s)	816
PctI	GAATGC	1 cut(s)	2233
PfeI	GAWTC	9 cut(s)	930, 1031, 1605, 1799, 2290, 2612, 2771, 2839, 2881
PflMI	CCANNNNNTGG	1 cut(s)	160
PfoI	TCCNGGA	3 cut(s)	1100, 1743, 2191
PleI	GAGTC	9 cut(s)	49, 56, 301, 738, 968, 1162, 1588, 1748, 2787
PmaCI	CACGTG	1 cut(s)	2749
PmlI	CACGTG	1 cut(s)	2749
PpsI	GAGTC	9 cut(s)	49, 56, 301, 738, 968, 1162, 1588, 1748, 2787
Ppu21I	YACGTR	1 cut(s)	2749
PpuMI	RGGWCCY	3 cut(s)	1612, 2693, 2723
PshAI	GACNNNNGTC	1 cut(s)	2790
Psp124BI	GAGCTC	2 cut(s)	35, 306
Psp1406I	AACGTT	1 cut(s)	620
Psp5II	RGGWCCY	3 cut(s)	1612, 2693, 2723
Psp6I	CCWGG	8 cut(s)	1100, 1231, 1743, 2191, 2590, 2624, 2719, 2806
PspCI	CACGTG	1 cut(s)	2749
PspFI	CCCAGC	1 cut(s)	1247
PspGI	CCWGG	8 cut(s)	1100, 1231, 1743, 2191, 2590, 2624, 2719, 2806
PspPI	GGNCC	8 cut(s)	194, 500, 1612, 1645, 2594, 2693, 2723, 2929
PspPPI	RGGWCCY	3 cut(s)	1612, 2693, 2723
PsrI	GAACNNNNNNTAC	2 cut(s)	1443, 1475
PstI	CTGCAG	1 cut(s)	2523
PstNI	CAGNNNCTG	2 cut(s)	2219, 2943
PsuI	RGATCY	3 cut(s)	7, 410, 1170
PvuII	CAGCTG	2 cut(s)	167, 1247
RsaI	GTAC	6 cut(s)	1260, 1452, 2004, 2283, 2564, 2819
RsaNI	GTAC	6 cut(s)	1259, 1451, 2003, 2282, 2563, 2818
RseI	CAYNNNNRTG	4 cut(s)	1784, 1891, 2558, 2751
Rsr2I	CGGWCCG	1 cut(s)	2929
RsrII	CGGWCCG	1 cut(s)	2929
SacI	GAGCTC	2 cut(s)	35, 306
SacII	CCGCGG	1 cut(s)	2935
SapI	GCTCTTC	1 cut(s)	816
Sau3AI	GATC	8 cut(s)	7, 90, 94, 410, 475, 1106, 1170, 1984
Sau96I	GGNCC	8 cut(s)	194, 500, 1612, 1645, 2594, 2693, 2723, 2929
SchI	GAGTC	9 cut(s)	50, 56, 302, 739, 968, 1163, 1589, 1749, 2788
ScrFI	CCNGG	9 cut(s)	1102, 1233, 1610, 1745, 2193, 2592, 2626, 2721, 2808
SduI	GDGCHC	7 cut(s)	35, 175, 306, 313, 1204, 1339, 2640
SfaNI	GCATC	8 cut(s)	265, 508, 535, 594, 1151, 1828, 2206, 2690
SfcI	CTRYAG	1 cut(s)	2519
Sfr274I	CTCGAG	1 cut(s)	1988
Sfr303I	CCGCGG	1 cut(s)	2935
SfuI	TTCGAA	1 cut(s)	2769
SgrAI	CRCCGGYG	1 cut(s)	134
SgrBI	CCGCGG	1 cut(s)	2935
SinI	GGWCC	7 cut(s)	194, 500, 1612, 1645, 2693, 2723, 2929
SlaI	CTCGAG	1 cut(s)	1988
SmiI	ATTTAAAT	1 cut(s)	2121
SmiMI	CAYNNNNRTG	4 cut(s)	1784, 1891, 2558, 2751
SmlI	CTYRAG	3 cut(s)	537, 1908, 1988
SmoI	CTYRAG	3 cut(s)	537, 1908, 1988
SpeI	ACTAGT	1 cut(s)	379
SspI	AATATT	1 cut(s)	1477
SspMI	CTAG	5 cut(s)	216, 380, 969, 1175, 2799
SstI	GAGCTC	2 cut(s)	35, 306
StyD4I	CCNGG	9 cut(s)	1100, 1231, 1608, 1743, 2191, 2590, 2624, 2719, 2806
StyI	CCWWGG	4 cut(s)	1174, 1764, 1772, 2475
SwaI	ATTTAAAT	1 cut(s)	2121
TaaI	ACNGT	4 cut(s)	86, 363, 1922, 2077
TaiI	ACGT	3 cut(s)	623, 879, 2751
TaqI	TCGA	8 cut(s)	93, 365, 513, 1198, 1989, 2183, 2769, 2870
TaqII	GACCGA	1 cut(s)	1415
TatI	WGTACW	3 cut(s)	1258, 2002, 2281
TauI	GCSGC	2 cut(s)	2512, 2937
TfiI	GAWTC	9 cut(s)	930, 1031, 1605, 1799, 2290, 2612, 2771, 2839, 2881
TscAI	CASTG	6 cut(s)	313, 421, 514, 1855, 1927, 2331
TseFI	GTSAC	4 cut(s)	115, 971, 1264, 1498
Tsp45I	GTSAC	4 cut(s)	115, 971, 1264, 1498
TspGWI	ACGGA	3 cut(s)	25, 2835, 2910
TspRI	CASTG	6 cut(s)	313, 421, 514, 1855, 1927, 2331
Van91I	CCANNNNNTGG	1 cut(s)	160
VpaK11BI	GGWCC	7 cut(s)	194, 500, 1612, 1645, 2693, 2723, 2929
XapI	RAATTY	4 cut(s)	490, 667, 1096, 2458
XceI	RCATGY	1 cut(s)	2860
XcmI	CCANNNNNNNNNTGG	4 cut(s)	1244, 2613, 2727, 2909
XhoI	CTCGAG	1 cut(s)	1988
XmaJI	CCTAGG	1 cut(s)	1174
XmiI	GTMKAC	1 cut(s)	585
XspI	CTAG	5 cut(s)	216, 380, 969, 1175, 2799
Zsp2I	ATGCAT	2 cut(s)	2233, 2683

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.