Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002616

Physical Location & Seq

Genomic Coordinates Reverse (-)

1366053 .. 1371557

Gene Structure 5505 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G03090.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2742 bp

ATGGTTCGATTGTTGCAGCCTAAACACATGGTACAAGCTGTGAACGCTTTGCATTGGCGAAACTCTGTGGAATTTCATAAGCTGCTTAAAGATAATGGAGATTTCTCTATTTGCTTTAACTCTGAGCAAGTGTTACCACAAAAGATTAGTGTTGAGAAGATGGTGAAAATGTTACCTCGGCACCTCATTGCGGTGGTTATGACTCCTAATAAAGATGGAAAGTCTCGTTATATACTGTGTGGGATCAGACTGTTGCAGACGTTGTGTGACTTAACACCTCGTAATGCTAAACTCGAGCAGGTCTTGCTTGACGATGTGAAATTATCAGCACAGATGATTGATCTGGTGATCCTTGTGATAATAGCTCTTGGCCGTAACAGAAAGGAAAGCTGTAATTCGAATAAAGAATCGTTACTAGAGGCTACATTGGTGGCTTCTTGTCTCCACCTGTTTCACGGGTTTATCTCTCCTAACTCCCAAGATCTTGTTCTCGTCTTGCTTGCACACCCAAGGGTTGATGTGTTTATAGACAGTGCTTTTGGAGCTGTTCTCAATGTTGTGATATCTTTGAAAGCGAAGTTGCTGTATAGACAAACTGACTCCCCAAAAAAGTTAGGCGCAAGTTCTGTAGAGGAGGTTAACTTCCACTGCCAACAAGCTGAAGCTGCTTTGCAGTTCCTTCATTCTCTATGCCAACACAAACCCTTTAGAGAACGTGTCGCTAAAAACAAGGAGCTATGTGGAAAAGGTGGCGTTCTTAGGCTAGCTCAATCCATACTATCACTAACTATTACACCTGAATTTGTTGGAGCAACCGTAACTATAGCTTCCACATCTAGAATGAAAGCAAAAGTTCTTTCAATTTTGCAGCATCTGTTTGAAGCGGAAAGTGTCTCATTCCTTGACGAGGTTGCAAATGCAGGAAACTTGCATTTAGCCAAAACTGTTGCCTCAGAGGTTCTTAAATTATTGAGGCTTGGCCTTTCTAAAGCTTCCATGGCTACTGCTTCTCCTGACTACCCGATGGGTTTTGTGCTACTTAACGCTATGCGCTTGGCTGACGTGCTCACTGATGACTCAAATTTTCGATCTTTTTTCACTGAACATTTTAGCATGGTTCTCAGCGCGGTATTTTGTCTCTCTCATGGAGATTTCTTGTCAATGTTGTGCTCTTCTGATCTTTCTTCAAGGGAGGATGATGCGAATGTTGATTATGATCTGTTTAAGTCAGCTGGATGGATTCTAAGTGTATTTTCATCTTCTGGGCAATCAGTCACACCTCAATTCAAGCTCAGTTTACAAAATAACCTTACCATGTCTTCATATGCACATCAACGAACATCCTTATTTATTAAAATGATTGCGAATCTTCACTGTTTCGTTCCCAACGTGTGCCAAGAACAGGATAGGAACCGTTTCATTCAGAATGTTATGAGTGGATTGCGAAAAGATCCTTCAAGCATATTGATTAAGATGTTACCAGGCTCTTCATATACTCCTGTGGCACAGAGAGGCACTGGTGTTTGCAGAAACCTAGGTTCTCTGTTGCGCCATGCAGAATCCTTGATCCCTAGTTCCCTCAACGAGGAAGATTTTCTGCTTTTGAGGGTGTTTTGTGACCAGTTACAGCCGTTAATCCATTCCGAGTTTGAGGAAAGTCAAGTACAGGTGAAGGTGAAAAAGCTTTTTGCTCTCTTATACATTGGTTTTACAATTCTCTGGCTTATCTGTTTAGTTACACTGATACAAGATATTGAAGGTAGGGGCGGGAATTTATCTGGTAAGCTAAAAGAGCTTCTGAATCTTAACAATGAGGAAGCTTCAGAGGATTGTGATGTCCGAGTTGAAGGTGTGATGACAAAGCAAGGCGTGAACGAGGAGATAGACACAGTTGAAAGGTTGAAAGAGAGCGATGCAGATGCTAGCAATCTTGAAACCAGTGGTTCAGATACAAGCTCTAACAGAGGGAAGGGTCTGGTTGAAGAGGGAGAGTTGGTTCAGAATATGAGCAAGCGATTTAAAGGCAGTGCATCAGGAGAGGTGAAGGAGGATGAGAAATCTGAAACCTTCCTTGTCTTTGAGAAGCAGAAGAAGAAACGGAAGCGTAGTATTATGAATGCTGATCAAATGGGGATGATTGAGAAGGCGCTTGCTGAAGAACCTGATTTGCAGCGGAATTCAGCTTCGAGACAGTTATGGGCTGATAAAATAAGTCAAAAGGGTTCGGAGGTTATTACATCTTCGCAGCTGAAAAACTGGCTGAATAACCGAAAAGCGAAACTAGCTCGAGCAAACAAGCAAACGGGGCCAGCTCATGATAATAACAGCTCAGGGGATCTACCGGAGAGTCCTGGAGATGAAAACACTTGGCAGCAGAAACCATCAACACCAATTAAAGATCAAACTGTAACAGAAACCCCGAAAACAGGAGAGAATCTGATGAGAACATCGTCATCATCAGAAGAAGGGATAAAGCAAGGGCAACAAGTGAGGCTTATGGATGAGAGAGGAGACGAGATCGGGAAGGGAACAGTGTTGAGAACAGACGGTGAATGGAACGGTTTAAGCTTGGAGACAAGACAGATATGTGTAGTTGATGTAATGGAGCTTAGTGAGTCATATGATGGGAGCAAAAAGATGATCCCTTATGGATCAGATGATGTTGGGAGGACTTTCACAGAGGCGAATTCAAGGTTTGGAGTTATGAGAGTGGCTTGGGATGTGAATAAGCTTCAGTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006355 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060194 GO:0060195 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:0097159 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

913

Amino Acids

101.57

Weight (kDa)

6.59

Isoelectric Point (pI)

41.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nodulin_N	PF25246	7 - 521	8.9e-217	Nodulin N-terminal domain
HTH_NDX	PF24426	680 - 743	4e-30	NDX Homeobox-like domain
Nodulin_C	PF24679	798 - 886	2.1e-30	Nodulin C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002616)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03090 AT4G03090 AT4G03090 AT4G03090 AT4G03090
fragaria_vesca	FvH4_2g24490 FvH4_2g24490 FvH4_2g24490 FvH4_2g24490 FvH4_2g24530 FvH4_2g24530 FvH4_5g24052
malus_domestica	MD02G1277900.v1.1
prunus_persica	Prupe.8G250800_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1
pyrus_communis	pycom02g23790 pycom07g03300
rosa_chinensis	RchiOBHm_Chr6g0292351
rosa_laevigata	RLG00000012038
rosa_multiflora	Rmu_co8039390.1_g000001 Rmu_sc0001354.1_g000010 Rmu_sc0011092.1_g000002
rosa_roxburghii	Rroxscaffold_7G00175160
rosa_rugosa	Rorug06G0225700 Rorug06G0225700 Rorug06G0225700 Rorug06G0225800 Rorug06G0225800
rosa_samantha	Rh6AG339000 Rh6BG346400 Rh6CG353300 Rh6DG339200
rosa_wichuraiana	Rw6G029510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	289
AccB1I	GGYRCC	1 cut(s)	180
AccII	CGCG	1 cut(s)	1127
AciI	CCGC	5 cut(s)	191, 884, 1127, 1767, 2173
AclWI	GGATC	7 cut(s)	251, 343, 1445, 1561, 2343, 2635, 2659
AcoI	YGGCCR	1 cut(s)	370
AcsI	RAATTY	6 cut(s)	71, 800, 1081, 1771, 2176, 2686
AcuI	CTGAAG	4 cut(s)	681, 1806, 2175, 2717
AfaI	GTAC	2 cut(s)	33, 1665
AfiI	CCNNNNNNNGG	5 cut(s)	190, 907, 1402, 1585, 2426
AflIII	ACRYGT	2 cut(s)	715, 1389
AjiI	CACGTC	1 cut(s)	1063
AjnI	CCWGG	2 cut(s)	1480, 2350
AjuI	GAANNNNNNNTTGG	2 cut(s)	471, 503
AloI	GAACNNNNNNTCC	2 cut(s)	1980, 2012
Alw21I	GWGCWC	2 cut(s)	1068, 1172
Alw26I	GTCTC	7 cut(s)	228, 446, 898, 1142, 2182, 2505, 2567
AlwI	GGATC	7 cut(s)	251, 343, 1445, 1561, 2343, 2635, 2659
AlwNI	CAGNNNCTG	1 cut(s)	874
Ama87I	CYCGRG	2 cut(s)	293, 2286
AoxI	GGCC	3 cut(s)	370, 979, 2306
ApeKI	GCWGC	7 cut(s)	16, 82, 665, 868, 2170, 2245, 2371
ApoI	RAATTY	6 cut(s)	71, 800, 1081, 1771, 2176, 2686
ArsI	GACNNNNNNTTYG	2 cut(s)	521, 553
Asp700I	GAANNNNTTC	2 cut(s)	1415, 1593
AspA2I	CCTAGG	1 cut(s)	1534
AspLEI	GCGC	5 cut(s)	620, 1053, 1127, 1551, 2149
AspS9I	GGNCC	1 cut(s)	2306
AsuHPI	GGTGA	6 cut(s)	175, 358, 1681, 1687, 2053, 2561
AsuII	TTCGAA	1 cut(s)	398
AsuNHI	GCTAGC	2 cut(s)	763, 1922
AvaI	CYCGRG	2 cut(s)	293, 2286
AvrII	CCTAGG	1 cut(s)	1534
BanI	GGYRCC	1 cut(s)	180
BbsI	GAAGAC	1 cut(s)	1311
Bbv12I	GWGCWC	2 cut(s)	1068, 1172
BbvI	GCAGC	7 cut(s)	28, 69, 652, 880, 2182, 2257, 2383
BccI	CCATC	6 cut(s)	154, 209, 1018, 1230, 2389, 2618
BceAI	ACGGC	2 cut(s)	357, 1615
BcgI	CGANNNNNNTGC	2 cut(s)	1901, 1935
BciT130I	CCWGG	2 cut(s)	1482, 2352
BclI	TGATCA	1 cut(s)	2122
BcoDI	GTCTC	7 cut(s)	228, 446, 898, 1142, 2182, 2505, 2567
BfaI	CTAG	7 cut(s)	416, 764, 837, 1535, 1572, 1923, 2282
BfmI	CTRYAG	2 cut(s)	627, 822
BfoI	RGCGCY	1 cut(s)	2150
BfuAI	ACCTGC	1 cut(s)	289
BglII	AGATCT	1 cut(s)	481
BisI	GCNGC	7 cut(s)	17, 83, 666, 869, 2171, 2246, 2372
BlnI	CCTAGG	1 cut(s)	1534
BlsI	GCNGC	7 cut(s)	18, 84, 667, 870, 2172, 2247, 2373
Bme1390I	CCNGG	2 cut(s)	1482, 2352
BmeT110I	CYCGRG	2 cut(s)	293, 2286
BmgBI	CACGTC	1 cut(s)	1063
BmgT120I	GGNCC	1 cut(s)	2306
BmiI	GGNNCC	3 cut(s)	182, 1412, 2307
BmrFI	CCNGG	2 cut(s)	1482, 2352
BmsI	GCATC	5 cut(s)	880, 1189, 1903, 1909, 2039
BmtI	GCTAGC	2 cut(s)	767, 1926
BpiI	GAAGAC	1 cut(s)	1311
BplI	GAGNNNNNCTC	2 cut(s)	534, 566
BpmI	CTGGAG	1 cut(s)	2373
Bpu10I	CCTNAGC	1 cut(s)	2329
Bpu14I	TTCGAA	1 cut(s)	398
BsaBI	GATNNNNATC	1 cut(s)	1215
BsaJI	CCNNGG	4 cut(s)	176, 509, 996, 1534
BsaWI	WCCGGW	1 cut(s)	2341
BsaXI	ACNNNNNCTCC	6 cut(s)	801, 831, 994, 1024, 1980, 2010
Bsc4I	CCNNNNNNNGG	5 cut(s)	190, 907, 1402, 1585, 2426
Bse1I	ACTGG	4 cut(s)	1522, 1621, 1938, 2261
Bse3DI	GCAATG	1 cut(s)	186
Bse8I	GATNNNNATC	1 cut(s)	1215
BseBI	CCWGG	2 cut(s)	1482, 2352
BseDI	CCNNGG	4 cut(s)	176, 509, 996, 1534
BseGI	GGATG	7 cut(s)	1201, 1241, 1340, 2056, 2139, 2506, 2725
BseJI	GATNNNNATC	1 cut(s)	1215
BseLI	CCNNNNNNNGG	5 cut(s)	190, 907, 1402, 1585, 2426
BseMI	GCAATG	1 cut(s)	186
BseMII	CTCAG	5 cut(s)	114, 966, 1135, 1306, 2343
BseNI	ACTGG	4 cut(s)	1522, 1621, 1938, 2261
BseRI	GAGGAG	3 cut(s)	647, 1892, 2523
BseXI	GCAGC	7 cut(s)	28, 69, 652, 880, 2182, 2257, 2383
Bsh1236I	CGCG	1 cut(s)	1127
BshFI	GGCC	3 cut(s)	372, 981, 2308
BshNI	GGYRCC	1 cut(s)	180
BsiHKAI	GWGCWC	2 cut(s)	1068, 1172
BsiHKCI	CYCGRG	2 cut(s)	293, 2286
BsiSI	CCGG	1 cut(s)	2342
BslI	CCNNNNNNNGG	5 cut(s)	190, 907, 1402, 1585, 2426
BsmAI	GTCTC	7 cut(s)	228, 446, 898, 1142, 2182, 2505, 2567
BsmBI	CGTCTC	1 cut(s)	2505
BsmI	GAATGC	1 cut(s)	2122
BsnI	GGCC	3 cut(s)	372, 981, 2308
BsoBI	CYCGRG	2 cut(s)	293, 2286
Bsp119I	TTCGAA	1 cut(s)	398
Bsp1286I	GDGCHC	2 cut(s)	1068, 1172
Bsp19I	CCATGG	1 cut(s)	996
BspACI	CCGC	5 cut(s)	191, 884, 1127, 1767, 2173
BspANI	GGCC	3 cut(s)	372, 981, 2308
BspCNI	CTCAG	5 cut(s)	115, 965, 1134, 1305, 2342
BspFNI	CGCG	1 cut(s)	1127
BspHI	TCATGA	1 cut(s)	2314
BspLI	GGNNCC	3 cut(s)	182, 1412, 2307
BspMI	ACCTGC	1 cut(s)	289
BspOI	GCTAGC	2 cut(s)	767, 1926
BspPI	GGATC	7 cut(s)	251, 343, 1445, 1561, 2343, 2635, 2659
BspQI	GCTCTTC	2 cut(s)	1177, 1492
BspT104I	TTCGAA	1 cut(s)	398
BspT107I	GGYRCC	1 cut(s)	180
BsrDI	GCAATG	1 cut(s)	186
BsrI	ACTGG	4 cut(s)	1522, 1621, 1938, 2261
BssECI	CCNNGG	4 cut(s)	176, 509, 996, 1534
BssT1I	CCWWGG	3 cut(s)	509, 996, 1534
Bst2UI	CCWGG	2 cut(s)	1482, 2352
Bst6I	CTCTTC	3 cut(s)	1177, 1492, 1977
BstAPI	GCANNNNNTGC	1 cut(s)	304
BstBI	TTCGAA	1 cut(s)	398
BstC8I	GCNNGC	6 cut(s)	501, 765, 1924, 2012, 2151, 2310
BstDEI	CTNAG	8 cut(s)	123, 758, 952, 1121, 1244, 1292, 2329, 2609
BstDSI	CCRYGG	1 cut(s)	996
BstENI	CCTNNNNNAGG	2 cut(s)	905, 1583
BstF5I	GGATG	7 cut(s)	1201, 1241, 1340, 2056, 2139, 2506, 2725
BstFNI	CGCG	1 cut(s)	1127
BstH2I	RGCGCY	1 cut(s)	2150
BstHHI	GCGC	5 cut(s)	620, 1053, 1127, 1551, 2149
BstMAI	GTCTC	7 cut(s)	228, 446, 898, 1142, 2182, 2505, 2567
BstMWI	GCNNNNNNNGC	8 cut(s)	44, 304, 542, 665, 998, 1792, 2282, 2305
BstNI	CCWGG	2 cut(s)	1482, 2352
BstSCI	CCNGG	2 cut(s)	1480, 2350
BstSFI	CTRYAG	2 cut(s)	627, 822
BstUI	CGCG	1 cut(s)	1127
BstV1I	GCAGC	7 cut(s)	28, 69, 652, 880, 2182, 2257, 2383
BstV2I	GAAGAC	1 cut(s)	1311
BstX2I	RGATCY	3 cut(s)	481, 1450, 2335
BstYI	RGATCY	3 cut(s)	481, 1450, 2335
BsuRI	GGCC	3 cut(s)	372, 981, 2308
BtgI	CCRYGG	1 cut(s)	996
BtgZI	GCGATG	1 cut(s)	1926
BtrI	CACGTC	1 cut(s)	1063
BtsCI	GGATG	7 cut(s)	1201, 1241, 1340, 2056, 2139, 2506, 2725
BtsI	GCAGTG	2 cut(s)	646, 2032
BveI	ACCTGC	1 cut(s)	289
Cac8I	GCNNGC	6 cut(s)	501, 765, 1924, 2012, 2151, 2310
CaiI	CAGNNNCTG	1 cut(s)	874
CciI	TCATGA	1 cut(s)	2314
CfoI	GCGC	5 cut(s)	620, 1053, 1127, 1551, 2149
Cfr13I	GGNCC	1 cut(s)	2306
Csp6I	GTAC	2 cut(s)	32, 1664
CviAII	CATG	7 cut(s)	28, 997, 1114, 1145, 1315, 1553, 2315
CviQI	GTAC	2 cut(s)	32, 1664
DdeI	CTNAG	8 cut(s)	123, 758, 952, 1121, 1244, 1292, 2329, 2609
DraI	TTTAAA	1 cut(s)	2020
EaeI	YGGCCR	1 cut(s)	370
Eam1104I	CTCTTC	3 cut(s)	1177, 1492, 1977
EarI	CTCTTC	3 cut(s)	1177, 1492, 1977
Eco130I	CCWWGG	3 cut(s)	509, 996, 1534
Eco32I	GATATC	1 cut(s)	564
Eco57I	CTGAAG	4 cut(s)	681, 1806, 2175, 2717
Eco88I	CYCGRG	2 cut(s)	293, 2286
EcoNI	CCTNNNNNAGG	2 cut(s)	905, 1583
EcoRI	GAATTC	2 cut(s)	2176, 2686
EcoRII	CCWGG	2 cut(s)	1480, 2350
EcoRV	GATATC	1 cut(s)	564
EcoT14I	CCWWGG	3 cut(s)	509, 996, 1534
ErhI	CCWWGG	3 cut(s)	509, 996, 1534
Esp3I	CGTCTC	1 cut(s)	2505
FaeI	CATG	7 cut(s)	31, 1000, 1117, 1148, 1318, 1556, 2318
FalI	AAGNNNNNCTT	2 cut(s)	2478, 2510
FatI	CATG	7 cut(s)	27, 996, 1113, 1144, 1314, 1552, 2314
FauI	CCCGC	1 cut(s)	1760
FauNDI	CATATG	2 cut(s)	1324, 2620
FbaI	TGATCA	1 cut(s)	2122
Fnu4HI	GCNGC	7 cut(s)	17, 83, 666, 869, 2171, 2246, 2372
FokI	GGATG	7 cut(s)	1208, 1248, 1327, 2063, 2146, 2513, 2732
Fsp4HI	GCNGC	7 cut(s)	17, 83, 666, 869, 2171, 2246, 2372
FspBI	CTAG	7 cut(s)	416, 764, 837, 1535, 1572, 1923, 2282
GlaI	GCGC	5 cut(s)	619, 1052, 1126, 1550, 2148
GluI	GCNGC	7 cut(s)	17, 83, 666, 869, 2171, 2246, 2372
GsuI	CTGGAG	1 cut(s)	2373
HaeII	RGCGCY	1 cut(s)	2150
HaeIII	GGCC	3 cut(s)	372, 981, 2308
HapII	CCGG	1 cut(s)	2342
HhaI	GCGC	5 cut(s)	620, 1053, 1127, 1551, 2149
Hin1II	CATG	7 cut(s)	31, 1000, 1117, 1148, 1318, 1556, 2318
Hin6I	GCGC	5 cut(s)	618, 1051, 1125, 1549, 2147
HinP1I	GCGC	5 cut(s)	618, 1051, 1125, 1549, 2147
HincII	GTYRAC	1 cut(s)	640
HindII	GTYRAC	1 cut(s)	640
HindIII	AAGCTT	5 cut(s)	990, 1682, 1818, 2566, 2729
HpaI	GTTAAC	1 cut(s)	640
HpaII	CCGG	1 cut(s)	2342
HphI	GGTGA	6 cut(s)	175, 358, 1681, 1687, 2053, 2561
Hpy166II	GTNNAC	4 cut(s)	43, 640, 1298, 1873
Hpy188III	TCNNGA	7 cut(s)	837, 1013, 1931, 2034, 2187, 2315, 2521
Hpy8I	GTNNAC	4 cut(s)	43, 640, 1298, 1873
HpyCH4IV	ACGT	4 cut(s)	260, 715, 1062, 1389
HpyF10VI	GCNNNNNNNGC	8 cut(s)	44, 304, 542, 665, 998, 1792, 2282, 2305
HpyF3I	CTNAG	8 cut(s)	123, 758, 952, 1121, 1244, 1292, 2329, 2609
HpySE526I	ACGT	4 cut(s)	260, 715, 1062, 1389
Hsp92II	CATG	7 cut(s)	31, 1000, 1117, 1148, 1318, 1556, 2318
HspAI	GCGC	5 cut(s)	618, 1051, 1125, 1549, 2147
Ksp22I	TGATCA	1 cut(s)	2122
KspAI	GTTAAC	1 cut(s)	640
LguI	GCTCTTC	2 cut(s)	1177, 1492
LmnI	GCTCC	5 cut(s)	542, 733, 809, 2605, 2628
Lsp1109I	GCAGC	7 cut(s)	28, 69, 652, 880, 2182, 2257, 2383
LweI	GCATC	5 cut(s)	880, 1189, 1903, 1909, 2039
MaeI	CTAG	7 cut(s)	416, 764, 837, 1535, 1572, 1923, 2282
MaeII	ACGT	4 cut(s)	260, 715, 1062, 1389
MflI	RGATCY	3 cut(s)	481, 1450, 2335
MhlI	GDGCHC	2 cut(s)	1068, 1172
MlyI	GAGTC	5 cut(s)	196, 593, 1070, 2356, 2624
MmeI	TCCRAC	1 cut(s)	787
MroXI	GAANNNNTTC	2 cut(s)	1415, 1593
MslI	CAYNNNNRTG	1 cut(s)	191
MspA1I	CMGCKG	3 cut(s)	1232, 2173, 2248
MspI	CCGG	1 cut(s)	2342
MspR9I	CCNGG	2 cut(s)	1482, 2352
Mva1269I	GAATGC	1 cut(s)	2122
MvaI	CCWGG	2 cut(s)	1482, 2352
MvnI	CGCG	1 cut(s)	1127
MwoI	GCNNNNNNNGC	8 cut(s)	44, 304, 542, 665, 998, 1792, 2282, 2305
NcoI	CCATGG	1 cut(s)	996
NdeI	CATATG	2 cut(s)	1324, 2620
NheI	GCTAGC	2 cut(s)	763, 1922
NlaIII	CATG	7 cut(s)	31, 1000, 1117, 1148, 1318, 1556, 2318
NlaIV	GGNNCC	3 cut(s)	182, 1412, 2307
NmeAIII	GCCGAG	1 cut(s)	157
NmuCI	GTSAC	3 cut(s)	266, 1273, 1616
NspV	TTCGAA	1 cut(s)	398
PaeR7I	CTCGAG	2 cut(s)	293, 2286
PagI	TCATGA	1 cut(s)	2314
PciSI	GCTCTTC	2 cut(s)	1177, 1492
PcsI	WCGNNNNNNNCGW	1 cut(s)	1386
PctI	GAATGC	1 cut(s)	2122
PdmI	GAANNNNTTC	2 cut(s)	1415, 1593
PfeI	GAWTC	6 cut(s)	407, 1240, 1366, 1559, 1801, 2434
PfoI	TCCNGGA	1 cut(s)	2350
PkrI	GCNGC	7 cut(s)	18, 84, 667, 870, 2172, 2247, 2373
PleI	GAGTC	5 cut(s)	196, 593, 1070, 2355, 2623
PpsI	GAGTC	5 cut(s)	196, 593, 1070, 2355, 2623
Psp6I	CCWGG	2 cut(s)	1480, 2350
PspGI	CCWGG	2 cut(s)	1480, 2350
PspN4I	GGNNCC	3 cut(s)	182, 1412, 2307
PspPI	GGNCC	1 cut(s)	2306
PspXI	VCTCGAGB	2 cut(s)	293, 2286
PstNI	CAGNNNCTG	1 cut(s)	874
PsuI	RGATCY	3 cut(s)	481, 1450, 2335
PvuII	CAGCTG	2 cut(s)	1232, 2248
RsaI	GTAC	2 cut(s)	33, 1665
RsaNI	GTAC	2 cut(s)	32, 1664
RseI	CAYNNNNRTG	1 cut(s)	191
SapI	GCTCTTC	2 cut(s)	1177, 1492
SatI	GCNGC	7 cut(s)	17, 83, 666, 869, 2171, 2246, 2372
Sau96I	GGNCC	1 cut(s)	2306
SchI	GAGTC	5 cut(s)	196, 593, 1070, 2356, 2624
ScrFI	CCNGG	2 cut(s)	1482, 2352
SduI	GDGCHC	2 cut(s)	1068, 1172
SfaNI	GCATC	5 cut(s)	880, 1189, 1903, 1909, 2039
SfcI	CTRYAG	2 cut(s)	627, 822
Sfr274I	CTCGAG	2 cut(s)	293, 2286
SfuI	TTCGAA	1 cut(s)	398
SlaI	CTCGAG	2 cut(s)	293, 2286
SmiMI	CAYNNNNRTG	1 cut(s)	191
SmlI	CTYRAG	2 cut(s)	293, 2286
SmoI	CTYRAG	2 cut(s)	293, 2286
SsiI	CCGC	5 cut(s)	191, 884, 1127, 1767, 2173
SspMI	CTAG	7 cut(s)	416, 764, 837, 1535, 1572, 1923, 2282
StyD4I	CCNGG	2 cut(s)	1480, 2350
StyI	CCWWGG	3 cut(s)	509, 996, 1534
TaiI	ACGT	4 cut(s)	263, 718, 1065, 1392
TaqI	TCGA	6 cut(s)	7, 294, 398, 1087, 2186, 2287
TatI	WGTACW	1 cut(s)	1663
TfiI	GAWTC	6 cut(s)	407, 1240, 1366, 1559, 1801, 2434
TseFI	GTSAC	3 cut(s)	266, 1273, 1616
TseI	GCWGC	7 cut(s)	16, 82, 665, 868, 2170, 2245, 2371
Tsp45I	GTSAC	3 cut(s)	266, 1273, 1616
TspDTI	ATGAA	9 cut(s)	65, 671, 857, 1245, 1311, 1408, 1479, 2129, 2373
TspGWI	ACGGA	1 cut(s)	2113
XagI	CCTNNNNNAGG	2 cut(s)	905, 1583
XapI	RAATTY	6 cut(s)	71, 800, 1081, 1771, 2176, 2686
XbaI	TCTAGA	1 cut(s)	836
XhoI	CTCGAG	2 cut(s)	293, 2286
XmaJI	CCTAGG	1 cut(s)	1534
XmnI	GAANNNNTTC	2 cut(s)	1415, 1593
XspI	CTAG	7 cut(s)	416, 764, 837, 1535, 1572, 1923, 2282

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.