Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0002616

Physical Location & Seq

Genomic Coordinates Reverse (-)

19963076 .. 19973126

Gene Structure 10051 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g24490.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2976 bp

ATGGGACCTGTTAAGGAAGAGCCGTCGTCATGCAATGCTTTGCAAGTTATTGACTTAGTTTCTGCAGTAAAGGAGTTACACGGGCTTAGCTCTCAGGAACTGGGTAAATTATTGAAGGACTCTGATAATTTTACTATACAGCATGTTACTGAAAAGGAATCACTCCTGAAGATTGACGTTGAAAAGCTCGCCAGTTCTCTCCCTTTGCACCTTATTGCAGTGCTTATGTCATCTGACCAAGATGGAGCCCTATTCAGATACTTATTATGTGGCATTAGGCTCTTGCACTCCTTATGCGATCTAGCACCTAGAAATCCCAAACTTGAACAGATTTTGCTCGATGATGTAAAAGTGTCAGAACAGCTGCTTGACCTGGTGTTCTATATCCTCATTGTTTTTAGTGGTTATGAACAGAAAAGTAATAATTTTGGTATGGCACCGCTGATGCACTCTGCACTAGTGGCGTGTACTTTACATCTACTTACTGGATGCATATCTTCACAGTGGCAAGATCTTGTTCAAGTATTGCTCGCACATCCTAAGGTTGACATATTTATGGAGGCAGCTTTTGGAGCAGTTTACACTTCCATTAAGTTTCTCAACCTCATGCTTTCATCTGAACATGAGCAAATAGTTCACTCTCTCTGCCAGCAATGTGAGGCCTCTTTACAGTTTCTCCAATTGCTGTGCCAGCAAAAATTGTTTCGGGAACGACTACTCAGGAATAAGGAACTATGTGGAAAAGGTGGTGTTCTGGTTCTGGCTCAATGCATATTGAAGCTGAACATTGCACCTCATTTAGCATCTGCTAGAATTGTGGCTGCCGTATCTAGACTGAAAGCAAAAATGCTCTCAATTCTGTTGAATCTCTGTGAAGCAGAAAGCATATCTTACCTGGACGAAGTTGCCAGCTCCCCAGGAAGCCTGGATTTGGCAAAGTCTGTTGCATTGGAGATTATTGATTTATTGAAGTGTGCTCTGGGTAAAGATCCCAAATGTTTAGCTGCTCGTTCTGATGGAAGTTACCCTATGGGGCTCGCCCAACTCAATGCCATGCGCCTAGCTGATATCTTATCTGATGATTCAAACTTTCGATCTTACATTACAATACACTTTACTCAAGTGCTGACTGCAATATTTTCGCTCCCTCATGGAGATTTTTTATCCAGTTGGTGTTCTTCTGTACTCCCTGTAAAGGAAGAAGATGGTTCTATTGAGTATGATTCATTTGCAACAGTTGGATGGGTTTTGGATGTAGTTTCATCTACTTACCTGCATAATGCACGAAGTTTAGAATTTTCTGTAACTCGCAATAGTATGACCCAGGCATCTTATGTGCATCAGAGGACATCATTATTTGTGAAAATAATTGCAAACCTCCATTGTTTTGTTCCCACTATCTGTGAAGAACAGGAGAGGAACCTTTTTGTTAACAAGTTTATGGAGTGCTTGCAAATGGATCCATCCAACTCATTGCCTGGAATTTCGTTTGCTTCTGATACTCTGAAAGCTGCAACTATCAGCAGAAATCTTTATTCGTTGCTAAGTCATGCGGAATCACTAATTCCAAACTTTTTGAATGAGGAGGATGTACAGCTCCTGAGGGTTTTCTCTAAGCAATTTGAATCACTACTCTCTCCAATGGAGGAGAAGAAGAGCGAGGAGTTGAAATATTGGGATAAATTCGCTAAACTCAATATCAGCGAACATCATCAGGAGGCTCAGAGTACTGGTGGATGCTCACCACTACCTTCAATAAGACAACTACCTCCTAGTCTTAGTAGCAGAAGTGGTAACCTGGAGGAAATAATGTCTGAGAATTCTGCTTTTCAAGATGTAGACCAAGTTGATGTGAACAGTGAGCATATGGATCGGGATGATGATGCAGTGAAGGAAGAGAAAGGTACATCTGGACGATTTACAGCAATCGACAGAGATGTTCATAATGTTGAGACAAGTGGTTCAGACACAAGTGAAACAAGAGGGAAAAATGCTGTTGATCGAATGGAAAACAATGAATTTCCAAAGTCAAGTGAACCAATTGAAGACAGTGGGTATGGAGGAACTCGAGAGGATGAAAAGAGTGAACCTCTTCAGTATGAAGAAACACAGAGAAGAAAACGGAAACGAACAATAATGAATGATGAACAAGTGGCGCTTGTGGAGAGAGCCCTATTAGATGAACCTGATATGCAGCGCAATGCAGCGTCGCTACAATCATGGGCTGATAGATTAAGTTATCATGGTTCCGATGTTACATCTTCACAGCTAAAAAACTGGCTAAATAATCGAAAAGCCAGGCTGGCCCGTACAAAGGATGTCCGTGCAGCACCAGAGGTCACTACACTACCAGATAAGCAAGGTGTGCAAGGACTGAGGTCCAACAACTCAGCCGAGAGTCCTATTGGAAATGCTACTGCGCAAACAAATGCGAGGAGTGATCCTCAAATGAAATCGAATAGTGTAGTCCAGATCTCTGGGACTAAAGCAGCTTCTGCACAAGCAAATGTGAGGAGTGATCCTCAAATGAAATCGAATAGTAGTGTAGTCCAGATCTCTGGGACTAAAGCAGCTTCTGCACAAGCAAATGTGAGGAGTGATCCTCAAATGAAATCGAATAGTAGTGTTGTCCAGATCTCTGGGACTAAAGCAGCAGAAGCTATTCCACATGGTCCTTCAAACTTTGTTCCATGCAAGCAAGGTGACCACGTTTTGCTTAAATATAATAACGGAGAGGAGGTTGGCCTTGGAAAGGTGTTTCAGGCTGGTGGCCAATGGTTTGGGAGGAACTTGGAGGAGTTGAGGGCATACGTTGTGGATATTAAAGAGCTTAAAGTCAGACGAGCAATGAAGCTTCCATACCCTTCTATGGCCACAGGAGGTTCATTTGAGGAGGCTGAAACAAAGATTGGCTTGATGAGAGTGTTATGGGATTCAAGCAAGACTTTCAAATTGCCTCCTCTAAGGTTAAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006355 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060194 GO:0060195 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:0097159 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

992

Amino Acids

109.63

Weight (kDa)

5.74

Isoelectric Point (pI)

43.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nodulin_N	PF25246	15 - 520	9e-248	Nodulin N-terminal domain
HTH_NDX	PF24426	713 - 749	1.4e-15	NDX Homeobox-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002616)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03090 AT4G03090 AT4G03090 AT4G03090 AT4G03090
fragaria_vesca	FvH4_2g24490 FvH4_2g24490 FvH4_2g24490 FvH4_2g24490 FvH4_2g24530 FvH4_2g24530 FvH4_5g24052
malus_domestica	MD02G1277900.v1.1
prunus_persica	Prupe.8G250800_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1
pyrus_communis	pycom02g23790 pycom07g03300
rosa_chinensis	RchiOBHm_Chr6g0292351
rosa_laevigata	RLG00000012038
rosa_multiflora	Rmu_co8039390.1_g000001 Rmu_sc0001354.1_g000010 Rmu_sc0011092.1_g000002
rosa_roxburghii	Rroxscaffold_7G00175160
rosa_rugosa	Rorug06G0225700 Rorug06G0225700 Rorug06G0225700 Rorug06G0225800 Rorug06G0225800
rosa_samantha	Rh6AG339000 Rh6BG346400 Rh6CG353300 Rh6DG339200
rosa_wichuraiana	Rw6G029510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2421
Acc36I	ACCTGC	1 cut(s)	1281
AccB1I	GGYRCC	1 cut(s)	436
AccI	GTMKAC	1 cut(s)	1839
AciI	CCGC	2 cut(s)	440, 1553
AclWI	GGATC	7 cut(s)	983, 1454, 1467, 1878, 2435, 2513, 2594
AcoI	YGGCCR	2 cut(s)	2770, 2871
AcsI	RAATTY	5 cut(s)	1295, 1482, 1682, 1819, 2018
AcuI	CTGAAG	2 cut(s)	188, 2078
AfaI	GTAC	6 cut(s)	469, 1185, 1593, 1729, 1906, 2311
AfiI	CCNNNNNNNGG	5 cut(s)	931, 1195, 2314, 2752, 2869
AhlI	ACTAGT	1 cut(s)	457
AjnI	CCWGG	8 cut(s)	372, 894, 916, 924, 1323, 1477, 1797, 2297
AjuI	GAANNNNNNNTTGG	2 cut(s)	2892, 2924
Alw21I	GWGCWC	1 cut(s)	979
Alw26I	GTCTC	1 cut(s)	1946
AlwI	GGATC	7 cut(s)	983, 1454, 1467, 1878, 2435, 2513, 2594
AlwNI	CAGNNNCTG	4 cut(s)	100, 1600, 2495, 2576
Ama87I	CYCGRG	1 cut(s)	2067
AoxI	GGCC	5 cut(s)	660, 2304, 2743, 2770, 2871
ApoI	RAATTY	5 cut(s)	1295, 1482, 1682, 1819, 2018
Asp700I	GAANNNNTTC	2 cut(s)	2091, 2661
AspLEI	GCGC	4 cut(s)	1059, 2158, 2199, 2422
AspS9I	GGNCC	4 cut(s)	5, 2305, 2379, 2672
AsuHPI	GGTGA	2 cut(s)	1734, 2714
AvaI	CYCGRG	1 cut(s)	2067
AvaII	GGWCC	3 cut(s)	5, 2379, 2672
AxyI	CCTNAGG	2 cut(s)	540, 1601
BalI	TGGCCA	2 cut(s)	2772, 2873
BamHI	GGATCC	1 cut(s)	1459
BanI	GGYRCC	1 cut(s)	436
BanII	GRGCYC	3 cut(s)	250, 1038, 2173
BarI	GAAGNNNNNNTAC	2 cut(s)	2843, 2875
BbsI	GAAGAC	1 cut(s)	2052
Bbv12I	GWGCWC	1 cut(s)	979
BccI	CCATC	5 cut(s)	236, 1010, 1199, 1236, 1471
BceAI	ACGGC	2 cut(s)	7, 809
BcgI	CGANNNNNNTGC	4 cut(s)	1122, 1156, 1853, 1887
BciT130I	CCWGG	8 cut(s)	374, 896, 918, 926, 1325, 1479, 1799, 2299
BcoDI	GTCTC	1 cut(s)	1946
BcuI	ACTAGT	1 cut(s)	457
BfaI	CTAG	7 cut(s)	302, 309, 458, 810, 831, 1061, 1773
BfmI	CTRYAG	1 cut(s)	63
BfoI	RGCGCY	1 cut(s)	2159
BfuAI	ACCTGC	1 cut(s)	1281
BglI	GCCNNNNNGGC	1 cut(s)	2303
BglII	AGATCT	4 cut(s)	511, 2472, 2553, 2634
BlpI	GCTNAGC	1 cut(s)	86
BmcAI	AGTACT	1 cut(s)	1729
Bme1390I	CCNGG	8 cut(s)	374, 896, 918, 926, 1325, 1479, 1799, 2299
Bme18I	GGWCC	3 cut(s)	5, 2379, 2672
BmeT110I	CYCGRG	1 cut(s)	2067
BmgT120I	GGNCC	4 cut(s)	5, 2305, 2379, 2672
BmiI	GGNNCC	6 cut(s)	6, 247, 438, 1421, 1461, 2248
BmrFI	CCNGG	8 cut(s)	374, 896, 918, 926, 1325, 1479, 1799, 2299
BmrI	ACTGGG	1 cut(s)	110
BmsI	GCATC	7 cut(s)	435, 479, 812, 1337, 1348, 1727, 1873
BmuI	ACTGGG	1 cut(s)	110
BoxI	GACNNNNGTC	1 cut(s)	2377
BpiI	GAAGAC	1 cut(s)	2052
BplI	GAGNNNNNCTC	8 cut(s)	2074, 2106, 2428, 2460, 2506, 2538, 2587, 2619
BpmI	CTGGAG	1 cut(s)	1820
Bpu1102I	GCTNAGC	1 cut(s)	86
BpuEI	CTTGAG	1 cut(s)	1104
BsaBI	GATNNNNATC	1 cut(s)	493
BsaJI	CCNNGG	3 cut(s)	916, 1323, 2746
BsaXI	ACNNNNNCTCC	4 cut(s)	660, 690, 2724, 2754
Bsc4I	CCNNNNNNNGG	5 cut(s)	931, 1195, 2314, 2752, 2869
Bse1I	ACTGG	6 cut(s)	105, 192, 490, 1167, 1735, 2282
Bse21I	CCTNAGG	2 cut(s)	540, 1601
Bse3DI	GCAATG	6 cut(s)	40, 659, 786, 1472, 2206, 2853
Bse8I	GATNNNNATC	1 cut(s)	493
BseBI	CCWGG	8 cut(s)	374, 896, 918, 926, 1325, 1479, 1799, 2299
BseDI	CCNNGG	3 cut(s)	916, 1323, 2746
BseJI	GATNNNNATC	1 cut(s)	493
BseLI	CCNNNNNNNGG	5 cut(s)	931, 1195, 2314, 2752, 2869
BseMI	GCAATG	6 cut(s)	40, 659, 786, 1472, 2206, 2853
BseMII	CTCAG	7 cut(s)	107, 733, 1592, 1736, 1806, 2366, 2403
BseNI	ACTGG	6 cut(s)	105, 192, 490, 1167, 1735, 2282
BsgI	GTGCAG	4 cut(s)	438, 2346, 2481, 2562
BshFI	GGCC	5 cut(s)	662, 2306, 2745, 2772, 2873
BshNI	GGYRCC	1 cut(s)	436
BsiHKAI	GWGCWC	1 cut(s)	979
BsiHKCI	CYCGRG	1 cut(s)	2067
BslFI	GGGAC	4 cut(s)	18, 2494, 2575, 2656
BslI	CCNNNNNNNGG	5 cut(s)	931, 1195, 2314, 2752, 2869
BsmAI	GTCTC	1 cut(s)	1946
BsmFI	GGGAC	4 cut(s)	18, 2494, 2575, 2656
BsnI	GGCC	5 cut(s)	662, 2306, 2745, 2772, 2873
BsoBI	CYCGRG	1 cut(s)	2067
Bsp1286I	GDGCHC	4 cut(s)	250, 979, 1038, 2173
Bsp1407I	TGTACA	1 cut(s)	1591
Bsp1720I	GCTNAGC	1 cut(s)	86
BspACI	CCGC	2 cut(s)	440, 1553
BspANI	GGCC	5 cut(s)	662, 2306, 2745, 2772, 2873
BspCNI	CTCAG	7 cut(s)	106, 732, 1593, 1735, 1807, 2367, 2402
BspLI	GGNNCC	6 cut(s)	6, 247, 438, 1421, 1461, 2248
BspMAI	CTGCAG	1 cut(s)	67
BspMI	ACCTGC	1 cut(s)	1281
BspPI	GGATC	7 cut(s)	983, 1454, 1467, 1878, 2435, 2513, 2594
BspQI	GCTCTTC	2 cut(s)	12, 1649
BspT107I	GGYRCC	1 cut(s)	436
BsrDI	GCAATG	6 cut(s)	40, 659, 786, 1472, 2206, 2853
BsrGI	TGTACA	1 cut(s)	1591
BsrI	ACTGG	6 cut(s)	105, 192, 490, 1167, 1735, 2282
BssECI	CCNNGG	3 cut(s)	916, 1323, 2746
BssT1I	CCWWGG	1 cut(s)	2746
Bst2UI	CCWGG	8 cut(s)	374, 896, 918, 926, 1325, 1479, 1799, 2299
Bst4CI	ACNGT	5 cut(s)	504, 672, 1237, 1859, 2051
Bst6I	CTCTTC	4 cut(s)	12, 1649, 1890, 2097
BstAPI	GCANNNNNTGC	3 cut(s)	2365, 2495, 2576
BstAUI	TGTACA	1 cut(s)	1591
BstC8I	GCNNGC	9 cut(s)	189, 531, 650, 692, 910, 1038, 1451, 2304, 2696
BstEII	GGTNACC	2 cut(s)	1793, 2702
BstENI	CCTNNNNNAGG	1 cut(s)	2750
BstH2I	RGCGCY	1 cut(s)	2159
BstHHI	GCGC	4 cut(s)	1059, 2158, 2199, 2422
BstMAI	GTCTC	1 cut(s)	1946
BstMWI	GCNNNNNNNGC	8 cut(s)	461, 572, 691, 2303, 2365, 2495, 2576, 2657
BstNI	CCWGG	8 cut(s)	374, 896, 918, 926, 1325, 1479, 1799, 2299
BstNSI	RCATGY	1 cut(s)	146
BstPAI	GACNNNNGTC	1 cut(s)	2377
BstPI	GGTNACC	2 cut(s)	1793, 2702
BstSCI	CCNGG	8 cut(s)	372, 894, 916, 924, 1323, 1477, 1797, 2297
BstSFI	CTRYAG	1 cut(s)	63
BstV2I	GAAGAC	1 cut(s)	2052
BstX2I	RGATCY	6 cut(s)	511, 988, 1459, 2472, 2553, 2634
BstXI	CCANNNNNNTGG	4 cut(s)	2477, 2558, 2639, 2780
BstYI	RGATCY	6 cut(s)	511, 988, 1459, 2472, 2553, 2634
Bsu36I	CCTNAGG	2 cut(s)	540, 1601
BsuRI	GGCC	5 cut(s)	662, 2306, 2745, 2772, 2873
BtsI	GCAGTG	2 cut(s)	225, 1893
BtsIMutI	CAGTG	5 cut(s)	225, 509, 1864, 1893, 2056
BveI	ACCTGC	1 cut(s)	1281
Cac8I	GCNNGC	9 cut(s)	189, 531, 650, 692, 910, 1038, 1451, 2304, 2696
CaiI	CAGNNNCTG	4 cut(s)	100, 1600, 2495, 2576
CfoI	GCGC	4 cut(s)	1059, 2158, 2199, 2422
Cfr13I	GGNCC	4 cut(s)	5, 2305, 2379, 2672
CseI	GACGC	1 cut(s)	2196
CsiI	ACCWGGT	1 cut(s)	372
Csp6I	GTAC	6 cut(s)	468, 1184, 1592, 1728, 1905, 2310
CviQI	GTAC	6 cut(s)	468, 1184, 1592, 1728, 1905, 2310
EaeI	YGGCCR	2 cut(s)	2770, 2871
Eam1104I	CTCTTC	4 cut(s)	12, 1649, 1890, 2097
EarI	CTCTTC	4 cut(s)	12, 1649, 1890, 2097
Eco130I	CCWWGG	1 cut(s)	2746
Eco147I	AGGCCT	1 cut(s)	662
Eco24I	GRGCYC	3 cut(s)	250, 1038, 2173
Eco32I	GATATC	1 cut(s)	1069
Eco47I	GGWCC	3 cut(s)	5, 2379, 2672
Eco57I	CTGAAG	2 cut(s)	188, 2078
Eco81I	CCTNAGG	2 cut(s)	540, 1601
Eco88I	CYCGRG	1 cut(s)	2067
Eco91I	GGTNACC	2 cut(s)	1793, 2702
EcoNI	CCTNNNNNAGG	1 cut(s)	2750
EcoO109I	RGGNCCY	1 cut(s)	5
EcoO65I	GGTNACC	2 cut(s)	1793, 2702
EcoRI	GAATTC	1 cut(s)	1819
EcoRII	CCWGG	8 cut(s)	372, 894, 916, 924, 1323, 1477, 1797, 2297
EcoRV	GATATC	1 cut(s)	1069
EcoT14I	CCWWGG	1 cut(s)	2746
EcoT22I	ATGCAT	2 cut(s)	494, 773
EcoT38I	GRGCYC	3 cut(s)	250, 1038, 2173
ErhI	CCWWGG	1 cut(s)	2746
FalI	AAGNNNNNCTT	8 cut(s)	874, 906, 2142, 2174, 2897, 2929, 2929, 2961
FaqI	GGGAC	4 cut(s)	18, 2494, 2575, 2656
FauNDI	CATATG	1 cut(s)	1866
FblI	GTMKAC	1 cut(s)	1839
FriOI	GRGCYC	3 cut(s)	250, 1038, 2173
FspBI	CTAG	7 cut(s)	302, 309, 458, 810, 831, 1061, 1773
FspI	TGCGCA	1 cut(s)	2421
GlaI	GCGC	4 cut(s)	1058, 2157, 2198, 2421
GsuI	CTGGAG	1 cut(s)	1820
HaeII	RGCGCY	1 cut(s)	2159
HaeIII	GGCC	5 cut(s)	662, 2306, 2745, 2772, 2873
HgaI	GACGC	1 cut(s)	2196
HhaI	GCGC	4 cut(s)	1059, 2158, 2199, 2422
Hin6I	GCGC	4 cut(s)	1057, 2156, 2197, 2420
HinP1I	GCGC	4 cut(s)	1057, 2156, 2197, 2420
HincII	GTYRAC	2 cut(s)	547, 1432
HindII	GTYRAC	2 cut(s)	547, 1432
HindIII	AAGCTT	1 cut(s)	2852
HinfI	GANTC	9 cut(s)	119, 158, 865, 1082, 1223, 1556, 1625, 2398, 2933
HpaI	GTTAAC	1 cut(s)	1432
HphI	GGTGA	2 cut(s)	1734, 2714
Hpy166II	GTNNAC	9 cut(s)	468, 547, 580, 637, 1432, 1840, 1855, 2036, 2087
Hpy8I	GTNNAC	9 cut(s)	468, 547, 580, 637, 1432, 1840, 1855, 2036, 2087
Hpy99I	CGWCG	2 cut(s)	28, 2212
HpyAV	CCTTC	5 cut(s)	109, 1761, 1885, 2685, 2874
HpyCH4III	ACNGT	5 cut(s)	504, 672, 1237, 1859, 2051
HpyCH4IV	ACGT	3 cut(s)	177, 2709, 2811
HpyF10VI	GCNNNNNNNGC	8 cut(s)	461, 572, 691, 2303, 2365, 2495, 2576, 2657
HpySE526I	ACGT	3 cut(s)	177, 2709, 2811
HspAI	GCGC	4 cut(s)	1057, 2156, 2197, 2420
KspAI	GTTAAC	1 cut(s)	1432
LguI	GCTCTTC	2 cut(s)	12, 1649
LmnI	GCTCC	5 cut(s)	245, 572, 917, 1149, 1602
LweI	GCATC	7 cut(s)	435, 479, 812, 1337, 1348, 1727, 1873
MabI	ACCWGGT	1 cut(s)	372
MaeI	CTAG	7 cut(s)	302, 309, 458, 810, 831, 1061, 1773
MaeII	ACGT	3 cut(s)	177, 2709, 2811
MaeIII	GTNAC	8 cut(s)	75, 145, 1022, 1303, 1793, 2254, 2338, 2702
MfeI	CAATTG	2 cut(s)	680, 2040
MflI	RGATCY	6 cut(s)	511, 988, 1459, 2472, 2553, 2634
MhlI	GDGCHC	4 cut(s)	250, 979, 1038, 2173
MlsI	TGGCCA	2 cut(s)	2772, 2873
MluNI	TGGCCA	2 cut(s)	2772, 2873
MlyI	GAGTC	2 cut(s)	113, 2407
MmeI	TCCRAC	3 cut(s)	1219, 1491, 2406
Mox20I	TGGCCA	2 cut(s)	2772, 2873
Mph1103I	ATGCAT	2 cut(s)	494, 773
MroXI	GAANNNNTTC	2 cut(s)	2091, 2661
MscI	TGGCCA	2 cut(s)	2772, 2873
MseI	TTAA	8 cut(s)	12, 591, 1431, 2234, 2718, 2823, 2832, 2969
MslI	CAYNNNNRTG	1 cut(s)	554
Msp20I	TGGCCA	2 cut(s)	2772, 2873
MspA1I	CMGCKG	2 cut(s)	364, 442
MspR9I	CCNGG	8 cut(s)	374, 896, 918, 926, 1325, 1479, 1799, 2299
MunI	CAATTG	2 cut(s)	680, 2040
MvaI	CCWGG	8 cut(s)	374, 896, 918, 926, 1325, 1479, 1799, 2299
MwoI	GCNNNNNNNGC	8 cut(s)	461, 572, 691, 2303, 2365, 2495, 2576, 2657
NdeI	CATATG	1 cut(s)	1866
NlaIV	GGNNCC	6 cut(s)	6, 247, 438, 1421, 1461, 2248
NmeAIII	GCCGAG	1 cut(s)	2419
NmuCI	GTSAC	2 cut(s)	2338, 2702
NsbI	TGCGCA	1 cut(s)	2421
NsiI	ATGCAT	2 cut(s)	494, 773
NspI	RCATGY	1 cut(s)	146
PaeR7I	CTCGAG	1 cut(s)	2067
PceI	AGGCCT	1 cut(s)	662
PciSI	GCTCTTC	2 cut(s)	12, 1649
PdmI	GAANNNNTTC	2 cut(s)	2091, 2661
PfeI	GAWTC	7 cut(s)	158, 865, 1082, 1223, 1556, 1625, 2933
PleI	GAGTC	2 cut(s)	113, 2406
PpsI	GAGTC	2 cut(s)	113, 2406
PpuMI	RGGWCCY	1 cut(s)	5
PshAI	GACNNNNGTC	1 cut(s)	2377
Psp5II	RGGWCCY	1 cut(s)	5
Psp6I	CCWGG	8 cut(s)	372, 894, 916, 924, 1323, 1477, 1797, 2297
PspEI	GGTNACC	2 cut(s)	1793, 2702
PspGI	CCWGG	8 cut(s)	372, 894, 916, 924, 1323, 1477, 1797, 2297
PspN4I	GGNNCC	6 cut(s)	6, 247, 438, 1421, 1461, 2248
PspPI	GGNCC	4 cut(s)	5, 2305, 2379, 2672
PspPPI	RGGWCCY	1 cut(s)	5
PstI	CTGCAG	1 cut(s)	67
PstNI	CAGNNNCTG	4 cut(s)	100, 1600, 2495, 2576
PsuI	RGATCY	6 cut(s)	511, 988, 1459, 2472, 2553, 2634
PvuII	CAGCTG	1 cut(s)	364
RsaI	GTAC	6 cut(s)	469, 1185, 1593, 1729, 1906, 2311
RsaNI	GTAC	6 cut(s)	468, 1184, 1592, 1728, 1905, 2310
RseI	CAYNNNNRTG	1 cut(s)	554
SapI	GCTCTTC	2 cut(s)	12, 1649
SaqAI	TTAA	8 cut(s)	12, 591, 1431, 2234, 2718, 2823, 2832, 2969
Sau96I	GGNCC	4 cut(s)	5, 2305, 2379, 2672
ScaI	AGTACT	1 cut(s)	1729
SchI	GAGTC	2 cut(s)	113, 2407
ScrFI	CCNGG	8 cut(s)	374, 896, 918, 926, 1325, 1479, 1799, 2299
SduI	GDGCHC	4 cut(s)	250, 979, 1038, 2173
SexAI	ACCWGGT	1 cut(s)	372
SfaNI	GCATC	7 cut(s)	435, 479, 812, 1337, 1348, 1727, 1873
SfcI	CTRYAG	1 cut(s)	63
Sfr274I	CTCGAG	1 cut(s)	2067
SinI	GGWCC	3 cut(s)	5, 2379, 2672
SlaI	CTCGAG	1 cut(s)	2067
SmiMI	CAYNNNNRTG	1 cut(s)	554
SmlI	CTYRAG	2 cut(s)	1119, 2067
SmoI	CTYRAG	2 cut(s)	1119, 2067
SpeI	ACTAGT	1 cut(s)	457
SseBI	AGGCCT	1 cut(s)	662
SsiI	CCGC	2 cut(s)	440, 1553
SspI	AATATT	2 cut(s)	1137, 1673
SspMI	CTAG	7 cut(s)	302, 309, 458, 810, 831, 1061, 1773
StuI	AGGCCT	1 cut(s)	662
StyD4I	CCNGG	8 cut(s)	372, 894, 916, 924, 1323, 1477, 1797, 2297
StyI	CCWWGG	1 cut(s)	2746
TaaI	ACNGT	5 cut(s)	504, 672, 1237, 1859, 2051
TaiI	ACGT	3 cut(s)	180, 2712, 2814
TaqI	TCGA	9 cut(s)	339, 1093, 1929, 2002, 2068, 2290, 2456, 2534, 2615
TatI	WGTACW	4 cut(s)	467, 1183, 1591, 1727
TfiI	GAWTC	7 cut(s)	158, 865, 1082, 1223, 1556, 1625, 2933
Tru1I	TTAA	8 cut(s)	12, 591, 1431, 2234, 2718, 2823, 2832, 2969
Tru9I	TTAA	8 cut(s)	12, 591, 1431, 2234, 2718, 2823, 2832, 2969
TscAI	CASTG	5 cut(s)	225, 509, 1864, 1893, 2056
TseFI	GTSAC	2 cut(s)	2338, 2702
Tsp45I	GTSAC	2 cut(s)	2338, 2702
TspGWI	ACGGA	3 cut(s)	2137, 2312, 2745
TspRI	CASTG	5 cut(s)	225, 509, 1864, 1893, 2056
VpaK11BI	GGWCC	3 cut(s)	5, 2379, 2672
XagI	CCTNNNNNAGG	1 cut(s)	2750
XapI	RAATTY	5 cut(s)	1295, 1482, 1682, 1819, 2018
XbaI	TCTAGA	1 cut(s)	830
XceI	RCATGY	1 cut(s)	146
XhoI	CTCGAG	1 cut(s)	2067
XmiI	GTMKAC	1 cut(s)	1839
XmnI	GAANNNNTTC	2 cut(s)	2091, 2661
XspI	CTAG	7 cut(s)	302, 309, 458, 810, 831, 1061, 1773
ZrmI	AGTACT	1 cut(s)	1729
Zsp2I	ATGCAT	2 cut(s)	494, 773

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.