Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0002616

Physical Location & Seq

Genomic Coordinates Forward (+)

33364391 .. 33372663

Gene Structure 8273 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1277900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2889 bp

ATGCACTCAGTGTGGTTTTGTAGAATGAGACATGCTAAGGAAGAAGCGTCATGTAGTACTACACAAGTTATTGACTTAGTTTCAGCTGTGAAGGAGTTACATGGGATTAACTCTCAGGAACTTAATAAATTACCGAGGGACTCTGAAAGTTTTACTATTCAGTATGTTACAGAAAAAGGATCAATTTCAAAAAAGATTGATGTGGAAAAGCTTGCGGGCTTCCTTCCTCTGCACCTTATTGCAGTGCTTATGTCATCTGACAGAGATGAAGCTCTTTTCAAATACCTATCATGCGGTATCAGGCTATTGCACTCCTTGTGTGATTTAGCACCTCGACATGCCAAACTTGAACAGGTTTTGCTGGATGATGTAAAAGTGTCAGAGCAGCTGCTTGACCTGGTGTTTTATATACTAATTGTTTTTGGTGGTTATGAACAGAAAAATCATAATTTTGGTATGGCACCCCTGATGCAATCTGCACTGGTTGCGTGCAGTCTACATTTACTAACCGTTTGTATATCTTCGCAATGGCAAGATCTTGTTCAAGTATTGCTTGCACATCCTAAGTTTTCTGCTTTTGTGGCTTTTGTTGGAGTGGTTGATGTGTTTATGGATGCTGCTTTTGGAGCAGTTTGTGTTTCCATGAAGTTTCTTAAGATCAAGCTGTCAGCTCAACAGGATGATTTCTGTACAAAATCAAGTTTGACTAGTGAGCAAATAGTTCACTCTCTCTGCCAGCAATGCGAAGCCTCTTTACAGTTTCTTCAATTGCTGTGCCAACAAAAGTTGTTTCGGGAACGATTACTCAGGAATAAGGAACTATGTGGAAAAGGTGGTGTTCTGTTTCTGGCTCAAGCCATCTTGAAGCTAAATGTCGTGCCTCAGTTTGCGACATCTGCTAGAGTTGTGGCTGCTGTATCTAGGCTCAAAGCTAAAATACTTTCAATGTTATTGAGCCTGAGTGAAGCAGAAAGTATGTCTTACCTGGATGAAGTTTCCAGCTCGCCAGCAAGCTTGGATTTGGCAAAGTCTGTTGTATTGGAGGTTCTTGAGGTAATGAAGACTGCTTTTGGAAAAGACCCCAGATCTTTTGCTGCATTTTCTGATAGAAGTTACCCAGTGGGGCTTTTGCAACTCAATGCAATGCGCCTAGCCGATATATTTTCTGATGATTCAAATTTTCGATCCTACATGACACATTACTTTACTAAAGTGATCACTGCAATATTTTTGCTCCCACATGGAGATTTTGTATCCTGTTGGTGTTCTTCTGAACTCCCTCTAAAGGAAGAAGATGGCAGTATTGAGTATGACTCATTTGCAACAGCTGGATGGGTTTTGGATGTATCCTCATCAGTTGACCAACTAAATGCAACAAGTTTAGAATTTCCTGTTACTCCCAGTATTGTGACCCAGGCTTCTTATTCACATCAGAGAACGGCCTTATTTGTGAAAATAATTGCAAATCTCCATTGTTTCATTCCCACCGTCTGTGAAGAACAGGAGAGGAACCACTTTGTTAATAAATTTCTGGAGTACTTGCAAATGGATTTATCGAACACATTGCCCGGATTTTCCCTTGCTTCTGATACTCCTAAAGCTGCAACTGTTTGCAGAAATCTACGTTCGTTGCTAAGTCATGCAGAATCATTAATTCCCAATTTTTTGAATGAGGAGGACGTGCAGCTCTTAAGGGTTTTCTCTAAGCAATTACAATCGTTAATCACTTCGGCTGAATTTGAAGAAACCCGAGTTCAGGCAAAGAAACACGAGGAGTCAATGTATAGAGATAAATTTGCTAAACTCAACATCAGTGATCATCAGGAGGCTCAGAGTACTGGAGGATGCTCGCCGCCATTATTGAGTAAACAACCTTCTAATCTTAATAACAGAAGTGCTAACCTTGAGGAAATGTCTGAGAATTCTGATTTTCAAGATGCGGACCAAGTTGATGTCAAGGAAGACAAAGGTTTATCCGGGAATGCATCTGGACGTTTTAGGGTGTACGAAAGAGATGCTCATAATGTTGAAACAAGTGGTTCAGACACAAGCTCAACAAGAGGAAAAAATGCTGTTGATCAGATGGAAAACAGTGAATTTCCAAAGACGAGTGCGCACATAAAGGAAAGTGGATACGGGGGAACCCCAGAGGATGAAAAGGTTGAAACTCTTCCGTCTGAGGAAAAGCAGCGGAGAAAACGGAAACGAACAATAATGAATGATATGCAGGTGGAACTTGTTGAGAGAGCCTTATTGGATGAACCTGATATGCAGCGAAATGCAGCCTCAGTACAATCATGGGCTGAGAAATTAAGTTTTCATGGTTCCGAGGTTACATGCGCACAGCTAAAAAATTGGTTAAACAATCGAAAAGCCAGGCTAGCCCGCACAGCTAAGGATGTTCGTGCAACACCAGAGGCTGACAATGCTTTGCCAGAAAAGCAAGCTGGGCGAGGACAAAGGTCCAACGTCTCCCCCGATAGTCCTGGTGGAGATGCTTCCGCCCAACAAAATGCGAGGAGAGATCCTCAAATCATGTTGAGACCTGGTATTGGAGAGGTAGCCGAGAATAACGTGGCAGAAACAGTTGGGAGTTCTGCAGATTTTGCACAGTGCAAGCAAGGTGACTCTGTTGTGCTGGTAGGTGCAAATGGAGAGCAGATCGGAATAGGAAAGGTGTTTCAGGTGCGTGGCCAATGGTACGGTAGGAACTTGGAAGAGCTGAGGGCGTATGTCGTGGATGTTAAAGAGCTTAAAGCTAGAAGATCAACGAGGCTTCCGCACCCGTCTATGGCCACCGGCGTTTCATTTGAGGAGGCAGAAACAAAGATTGGCGTGATGAGAGTGTTGTGGGATTCGAACATGACTTTCTTATATCGTCCTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006355 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060194 GO:0060195 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:0097159 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

963

Amino Acids

107.1

Weight (kDa)

5.85

Isoelectric Point (pI)

42.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nodulin_N	PF25246	22 - 550	7.8e-248	Nodulin N-terminal domain
HTH_NDX	PF24426	739 - 802	5e-36	NDX Homeobox-like domain
Nodulin_C	PF24679	870 - 955	1.5e-37	Nodulin C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002616)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03090 AT4G03090 AT4G03090 AT4G03090 AT4G03090
fragaria_vesca	FvH4_2g24490 FvH4_2g24490 FvH4_2g24490 FvH4_2g24490 FvH4_2g24530 FvH4_2g24530 FvH4_5g24052
malus_domestica	MD02G1277900.v1.1
prunus_persica	Prupe.8G250800_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1 Prupe.8G267900_v2.0.a1
pyrus_communis	pycom02g23790 pycom07g03300
rosa_chinensis	RchiOBHm_Chr6g0292351
rosa_laevigata	RLG00000012038
rosa_multiflora	Rmu_co8039390.1_g000001 Rmu_sc0001354.1_g000010 Rmu_sc0011092.1_g000002
rosa_roxburghii	Rroxscaffold_7G00175160
rosa_rugosa	Rorug06G0225700 Rorug06G0225700 Rorug06G0225700 Rorug06G0225800 Rorug06G0225800
rosa_samantha	Rh6AG339000 Rh6BG346400 Rh6CG353300 Rh6DG339200
rosa_wichuraiana	Rw6G029510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2218
Acc16I	TGCGCA	2 cut(s)	2115, 2341
Acc36I	ACCTGC	1 cut(s)	2218
AccB1I	GGYRCC	1 cut(s)	460
AccI	GTMKAC	1 cut(s)	496
AciI	CCGC	8 cut(s)	215, 294, 1853, 1940, 2191, 2386, 2502, 2780
AclWI	GGATC	3 cut(s)	187, 1179, 2519
AcoI	YGGCCR	2 cut(s)	2692, 2793
AcsI	RAATTY	7 cut(s)	1177, 1385, 1526, 1736, 1793, 1921, 2096
AdeI	CACNNNGTG	1 cut(s)	10
AfaI	GTAC	7 cut(s)	58, 691, 1538, 1837, 2006, 2292, 2702
AfiI	CCNNNNNNNGG	4 cut(s)	1285, 1756, 2552, 2791
AflII	CTTAAG	2 cut(s)	653, 1690
AhlI	ACTAGT	1 cut(s)	707
AjiI	CACGTC	1 cut(s)	1681
AjnI	CCWGG	6 cut(s)	396, 984, 1413, 2375, 2485, 2545
AjuI	GAANNNNNNNTTGG	2 cut(s)	2814, 2846
Alw26I	GTCTC	3 cut(s)	22, 2476, 2536
AlwI	GGATC	3 cut(s)	187, 1179, 2519
AlwNI	CAGNNNCTG	1 cut(s)	2420
Ama87I	CYCGRG	1 cut(s)	1749
AoxI	GGCC	3 cut(s)	1440, 2692, 2793
ApoI	RAATTY	7 cut(s)	1177, 1385, 1526, 1736, 1793, 1921, 2096
AseI	ATTAAT	1 cut(s)	1652
Asp700I	GAANNNNTTC	1 cut(s)	2169
AspLEI	GCGC	3 cut(s)	1149, 2116, 2342
AspS9I	GGNCC	2 cut(s)	1942, 2463
AsuC2I	CCSGG	2 cut(s)	1569, 1978
AsuHPI	GGTGA	1 cut(s)	2636
AsuII	TTCGAA	1 cut(s)	2858
AsuNHI	GCTAGC	1 cut(s)	2380
AvaI	CYCGRG	1 cut(s)	1749
AvaII	GGWCC	2 cut(s)	1942, 2463
BalI	TGGCCA	2 cut(s)	2694, 2795
BanI	GGYRCC	1 cut(s)	460
BarI	GAAGNNNNNNTAC	4 cut(s)	738, 770, 1858, 1890
BauI	CACGAG	1 cut(s)	1769
BbsI	GAAGAC	2 cut(s)	1067, 1968
BbvCI	CCTCAGC	1 cut(s)	2723
BccI	CCATC	4 cut(s)	866, 1289, 1326, 2077
BceAI	ACGGC	1 cut(s)	1455
BcgI	CGANNNNNNTGC	4 cut(s)	1546, 1580, 1997, 2031
BciT130I	CCWGG	6 cut(s)	398, 986, 1415, 2377, 2487, 2547
BciVI	GTATCC	3 cut(s)	1264, 1357, 2126
BclI	TGATCA	3 cut(s)	1215, 1816, 2077
BcnI	CCSGG	2 cut(s)	1569, 1978
BcoDI	GTCTC	3 cut(s)	22, 2476, 2536
BcuI	ACTAGT	1 cut(s)	707
BfaI	CTAG	6 cut(s)	708, 900, 921, 1151, 2381, 2760
BfmI	CTRYAG	1 cut(s)	2598
BfrI	CTTAAG	2 cut(s)	653, 1690
BfuAI	ACCTGC	1 cut(s)	2218
BfuI	GTATCC	3 cut(s)	1264, 1357, 2126
BglII	AGATCT	2 cut(s)	535, 1085
BmcAI	AGTACT	3 cut(s)	58, 1538, 1837
Bme1390I	CCNGG	8 cut(s)	398, 986, 1415, 1569, 1978, 2377, 2487, 2547
Bme18I	GGWCC	2 cut(s)	1942, 2463
BmeT110I	CYCGRG	1 cut(s)	1749
BmgBI	CACGTC	1 cut(s)	1681
BmgT120I	GGNCC	2 cut(s)	1942, 2463
BmiI	GGNNCC	4 cut(s)	462, 1511, 2143, 2326
BmrFI	CCNGG	8 cut(s)	398, 986, 1415, 1569, 1978, 2377, 2487, 2547
BmrI	ACTGGG	2 cut(s)	1112, 1395
BmsI	GCATC	7 cut(s)	459, 604, 1835, 1927, 1994, 2005, 2485
BmtI	GCTAGC	1 cut(s)	2384
BmuI	ACTGGG	2 cut(s)	1112, 1395
BoxI	GACNNNNGTC	1 cut(s)	2461
BpiI	GAAGAC	2 cut(s)	1067, 1968
BplI	GAGNNNNNCTC	4 cut(s)	1298, 1330, 2512, 2544
BpmI	CTGGAG	2 cut(s)	1553, 1860
Bpu10I	CCTNAGC	3 cut(s)	36, 2394, 2723
Bpu14I	TTCGAA	1 cut(s)	2858
BpuEI	CTTGAG	3 cut(s)	837, 1070, 1925
BpuMI	CCSGG	2 cut(s)	1569, 1978
BsaI	GGTCTC	1 cut(s)	2536
BsaJI	CCNNGG	3 cut(s)	134, 1413, 2328
BsaXI	ACNNNNNCTCC	4 cut(s)	1236, 1266, 1766, 1796
Bsc4I	CCNNNNNNNGG	4 cut(s)	1285, 1756, 2552, 2791
Bse118I	RCCGGY	1 cut(s)	2798
Bse1I	ACTGG	4 cut(s)	486, 1118, 1401, 1843
Bse3DI	GCAATG	4 cut(s)	533, 746, 1149, 1562
BseBI	CCWGG	6 cut(s)	398, 986, 1415, 2377, 2487, 2547
BseDI	CCNNGG	3 cut(s)	134, 1413, 2328
BseLI	CCNNNNNNNGG	4 cut(s)	1285, 1756, 2552, 2791
BseMI	GCAATG	4 cut(s)	533, 746, 1149, 1562
BseNI	ACTGG	4 cut(s)	486, 1118, 1401, 1843
BseRI	GAGGAG	4 cut(s)	1688, 1787, 2533, 2828
BseYI	CCCAGC	1 cut(s)	2447
BsgI	GTGCAG	4 cut(s)	215, 462, 511, 1703
BshFI	GGCC	3 cut(s)	1442, 2694, 2795
BshNI	GGYRCC	1 cut(s)	460
BsiHKCI	CYCGRG	1 cut(s)	1749
BsiSI	CCGG	3 cut(s)	1569, 1977, 2799
BslFI	GGGAC	1 cut(s)	152
BslI	CCNNNNNNNGG	4 cut(s)	1285, 1756, 2552, 2791
BsmAI	GTCTC	3 cut(s)	22, 2476, 2536
BsmBI	CGTCTC	1 cut(s)	2476
BsmFI	GGGAC	1 cut(s)	152
BsmI	GAATGC	1 cut(s)	1987
BsnI	GGCC	3 cut(s)	1442, 2694, 2795
Bso31I	GGTCTC	1 cut(s)	2536
BsoBI	CYCGRG	1 cut(s)	1749
Bsp119I	TTCGAA	1 cut(s)	2858
Bsp1407I	TGTACA	1 cut(s)	689
BspACI	CCGC	8 cut(s)	215, 294, 1853, 1940, 2191, 2386, 2502, 2780
BspANI	GGCC	3 cut(s)	1442, 2694, 2795
BspLI	GGNNCC	4 cut(s)	462, 1511, 2143, 2326
BspMAI	CTGCAG	1 cut(s)	2602
BspMI	ACCTGC	1 cut(s)	2218
BspOI	GCTAGC	1 cut(s)	2384
BspPI	GGATC	3 cut(s)	187, 1179, 2519
BspQI	GCTCTTC	1 cut(s)	2712
BspT104I	TTCGAA	1 cut(s)	2858
BspT107I	GGYRCC	1 cut(s)	460
BspTI	CTTAAG	2 cut(s)	653, 1690
BspTNI	GGTCTC	1 cut(s)	2536
BsrDI	GCAATG	4 cut(s)	533, 746, 1149, 1562
BsrFI	RCCGGY	1 cut(s)	2798
BsrGI	TGTACA	1 cut(s)	689
BsrI	ACTGG	4 cut(s)	486, 1118, 1401, 1843
BssAI	RCCGGY	1 cut(s)	2798
BssECI	CCNNGG	3 cut(s)	134, 1413, 2328
BssSI	CACGAG	1 cut(s)	1769
Bst2BI	CACGAG	1 cut(s)	1769
Bst2UI	CCWGG	6 cut(s)	398, 986, 1415, 2377, 2487, 2547
Bst4CI	ACNGT	8 cut(s)	511, 759, 1489, 1609, 2093, 2587, 2613, 2705
Bst6I	CTCTTC	2 cut(s)	2175, 2712
BstAFI	CTTAAG	2 cut(s)	653, 1690
BstAPI	GCANNNNNTGC	2 cut(s)	485, 2606
BstAUI	TGTACA	1 cut(s)	689
BstBI	TTCGAA	1 cut(s)	2858
BstHHI	GCGC	3 cut(s)	1149, 2116, 2342
BstMAI	GTCTC	3 cut(s)	22, 2476, 2536
BstNI	CCWGG	6 cut(s)	398, 986, 1415, 2377, 2487, 2547
BstNSI	RCATGY	3 cut(s)	35, 341, 2340
BstPAI	GACNNNNGTC	1 cut(s)	2461
BstSCI	CCNGG	8 cut(s)	396, 984, 1413, 1567, 1976, 2375, 2485, 2545
BstSFI	CTRYAG	1 cut(s)	2598
BstV2I	GAAGAC	2 cut(s)	1067, 1968
BstX2I	RGATCY	3 cut(s)	535, 1085, 2524
BstYI	RGATCY	3 cut(s)	535, 1085, 2524
BsuI	GTATCC	3 cut(s)	1264, 1357, 2126
BsuRI	GGCC	3 cut(s)	1442, 2694, 2795
BtrI	CACGTC	1 cut(s)	1681
BtsI	GCAGTG	2 cut(s)	249, 1218
BtsIMutI	CAGTG	8 cut(s)	15, 249, 479, 1125, 1218, 1819, 2098, 2618
BveI	ACCTGC	1 cut(s)	2218
CaiI	CAGNNNCTG	1 cut(s)	2420
CfoI	GCGC	3 cut(s)	1149, 2116, 2342
Cfr10I	RCCGGY	1 cut(s)	2798
Cfr13I	GGNCC	2 cut(s)	1942, 2463
CseI	GACGC	1 cut(s)	36
CsiI	ACCWGGT	2 cut(s)	396, 2545
Csp6I	GTAC	7 cut(s)	57, 690, 1537, 1836, 2005, 2291, 2701
CviQI	GTAC	7 cut(s)	57, 690, 1537, 1836, 2005, 2291, 2701
DraIII	CACNNNGTG	1 cut(s)	10
EaeI	YGGCCR	2 cut(s)	2692, 2793
Eam1104I	CTCTTC	2 cut(s)	2175, 2712
EarI	CTCTTC	2 cut(s)	2175, 2712
EciI	GGCGGA	1 cut(s)	2491
Eco31I	GGTCTC	1 cut(s)	2536
Eco47I	GGWCC	2 cut(s)	1942, 2463
Eco88I	CYCGRG	1 cut(s)	1749
EcoRI	GAATTC	1 cut(s)	1921
EcoRII	CCWGG	6 cut(s)	396, 984, 1413, 2375, 2485, 2545
EcoT22I	ATGCAT	1 cut(s)	1987
Esp3I	CGTCTC	1 cut(s)	2476
FalI	AAGNNNNNCTT	4 cut(s)	537, 569, 964, 996
FaqI	GGGAC	1 cut(s)	152
FauI	CCCGC	2 cut(s)	208, 2393
FbaI	TGATCA	3 cut(s)	1215, 1816, 2077
FblI	GTMKAC	1 cut(s)	496
FspAI	RTGCGCAY	2 cut(s)	2115, 2341
FspBI	CTAG	6 cut(s)	708, 900, 921, 1151, 2381, 2760
FspI	TGCGCA	2 cut(s)	2115, 2341
GlaI	GCGC	3 cut(s)	1148, 2115, 2341
GsaI	CCCAGC	1 cut(s)	2451
GsuI	CTGGAG	2 cut(s)	1553, 1860
HaeIII	GGCC	3 cut(s)	1442, 2694, 2795
HapII	CCGG	3 cut(s)	1569, 1977, 2799
HgaI	GACGC	1 cut(s)	36
HhaI	GCGC	3 cut(s)	1149, 2116, 2342
Hin6I	GCGC	3 cut(s)	1147, 2114, 2340
HinP1I	GCGC	3 cut(s)	1147, 2114, 2340
HincII	GTYRAC	1 cut(s)	1360
HindII	GTYRAC	1 cut(s)	1360
HindIII	AAGCTT	2 cut(s)	209, 1012
HinfI	GANTC	7 cut(s)	140, 1172, 1313, 1646, 1775, 2627, 2855
HpaII	CCGG	3 cut(s)	1569, 1977, 2799
HphI	GGTGA	1 cut(s)	2636
Hpy166II	GTNNAC	5 cut(s)	497, 724, 1360, 1868, 2005
Hpy188III	TCNNGA	9 cut(s)	116, 794, 808, 862, 1049, 1532, 1823, 1934, 1989
Hpy8I	GTNNAC	5 cut(s)	497, 724, 1360, 1868, 2005
HpyAV	CCTTC	3 cut(s)	85, 233, 1884
HpyCH4III	ACNGT	8 cut(s)	511, 759, 1489, 1609, 2093, 2587, 2613, 2705
HpyCH4IV	ACGT	5 cut(s)	1624, 1680, 1993, 2469, 2574
HpySE526I	ACGT	5 cut(s)	1624, 1680, 1993, 2469, 2574
HspAI	GCGC	3 cut(s)	1147, 2114, 2340
Ksp22I	TGATCA	3 cut(s)	1215, 1816, 2077
LguI	GCTCTTC	1 cut(s)	2712
LmnI	GCTCC	2 cut(s)	626, 1239
LweI	GCATC	7 cut(s)	459, 604, 1835, 1927, 1994, 2005, 2485
MabI	ACCWGGT	2 cut(s)	396, 2545
MaeI	CTAG	6 cut(s)	708, 900, 921, 1151, 2381, 2760
MaeII	ACGT	5 cut(s)	1624, 1680, 1993, 2469, 2574
MaeIII	GTNAC	7 cut(s)	96, 166, 1112, 1393, 1408, 2332, 2624
MfeI	CAATTG	1 cut(s)	767
MflI	RGATCY	3 cut(s)	535, 1085, 2524
MlsI	TGGCCA	2 cut(s)	2694, 2795
MluNI	TGGCCA	2 cut(s)	2694, 2795
MlyI	GAGTC	4 cut(s)	134, 1307, 1784, 2621
MmeI	TCCRAC	2 cut(s)	571, 2490
Mox20I	TGGCCA	2 cut(s)	2694, 2795
Mph1103I	ATGCAT	1 cut(s)	1987
MroXI	GAANNNNTTC	1 cut(s)	2169
MscI	TGGCCA	2 cut(s)	2694, 2795
Msp20I	TGGCCA	2 cut(s)	2694, 2795
MspA1I	CMGCKG	4 cut(s)	86, 388, 1328, 2191
MspCI	CTTAAG	2 cut(s)	653, 1690
MspI	CCGG	3 cut(s)	1569, 1977, 2799
MspR9I	CCNGG	8 cut(s)	398, 986, 1415, 1569, 1978, 2377, 2487, 2547
MunI	CAATTG	1 cut(s)	767
Mva1269I	GAATGC	1 cut(s)	1987
MvaI	CCWGG	6 cut(s)	398, 986, 1415, 2377, 2487, 2547
NciI	CCSGG	2 cut(s)	1569, 1978
NheI	GCTAGC	1 cut(s)	2380
NlaIV	GGNNCC	4 cut(s)	462, 1511, 2143, 2326
NmeAIII	GCCGAG	1 cut(s)	2590
NmuCI	GTSAC	2 cut(s)	1408, 2624
NsbI	TGCGCA	2 cut(s)	2115, 2341
NsiI	ATGCAT	1 cut(s)	1987
NspI	RCATGY	3 cut(s)	35, 341, 2340
NspV	TTCGAA	1 cut(s)	2858
PaqCI	CACCTGC	1 cut(s)	2218
PciSI	GCTCTTC	1 cut(s)	2712
PcsI	WCGNNNNNNNCGW	1 cut(s)	2475
PctI	GAATGC	1 cut(s)	1987
PdmI	GAANNNNTTC	1 cut(s)	2169
PfeI	GAWTC	3 cut(s)	1172, 1646, 2855
PfoI	TCCNGGA	1 cut(s)	1976
PleI	GAGTC	4 cut(s)	134, 1307, 1783, 2621
PpsI	GAGTC	4 cut(s)	134, 1307, 1783, 2621
PshAI	GACNNNNGTC	1 cut(s)	2461
PshBI	ATTAAT	1 cut(s)	1652
Psp6I	CCWGG	6 cut(s)	396, 984, 1413, 2375, 2485, 2545
PspFI	CCCAGC	1 cut(s)	2447
PspGI	CCWGG	6 cut(s)	396, 984, 1413, 2375, 2485, 2545
PspN4I	GGNNCC	4 cut(s)	462, 1511, 2143, 2326
PspPI	GGNCC	2 cut(s)	1942, 2463
PsrI	GAACNNNNNNTAC	2 cut(s)	1029, 1061
PstI	CTGCAG	1 cut(s)	2602
PstNI	CAGNNNCTG	1 cut(s)	2420
PsuI	RGATCY	3 cut(s)	535, 1085, 2524
PvuII	CAGCTG	3 cut(s)	86, 388, 1328
RsaI	GTAC	7 cut(s)	58, 691, 1538, 1837, 2006, 2292, 2702
RsaNI	GTAC	7 cut(s)	57, 690, 1537, 1836, 2005, 2291, 2701
SapI	GCTCTTC	1 cut(s)	2712
Sau96I	GGNCC	2 cut(s)	1942, 2463
ScaI	AGTACT	3 cut(s)	58, 1538, 1837
SchI	GAGTC	4 cut(s)	134, 1307, 1784, 2621
ScrFI	CCNGG	8 cut(s)	398, 986, 1415, 1569, 1978, 2377, 2487, 2547
SexAI	ACCWGGT	2 cut(s)	396, 2545
SfaNI	GCATC	7 cut(s)	459, 604, 1835, 1927, 1994, 2005, 2485
SfcI	CTRYAG	1 cut(s)	2598
SfuI	TTCGAA	1 cut(s)	2858
SgrAI	CRCCGGYG	1 cut(s)	2798
SinI	GGWCC	2 cut(s)	1942, 2463
SmlI	CTYRAG	5 cut(s)	653, 852, 1049, 1690, 1904
SmoI	CTYRAG	5 cut(s)	653, 852, 1049, 1690, 1904
SpeI	ACTAGT	1 cut(s)	707
SsiI	CCGC	8 cut(s)	215, 294, 1853, 1940, 2191, 2386, 2502, 2780
SspI	AATATT	1 cut(s)	1227
SspMI	CTAG	6 cut(s)	708, 900, 921, 1151, 2381, 2760
StyD4I	CCNGG	8 cut(s)	396, 984, 1413, 1567, 1976, 2375, 2485, 2545
TaaI	ACNGT	8 cut(s)	511, 759, 1489, 1609, 2093, 2587, 2613, 2705
TaiI	ACGT	5 cut(s)	1627, 1683, 1996, 2472, 2577
TaqI	TCGA	5 cut(s)	334, 1183, 1556, 2368, 2858
TatI	WGTACW	5 cut(s)	56, 689, 1536, 1835, 2290
TauI	GCSGC	1 cut(s)	1855
TfiI	GAWTC	3 cut(s)	1172, 1646, 2855
TscAI	CASTG	8 cut(s)	15, 249, 486, 1125, 1225, 1819, 2098, 2618
TseFI	GTSAC	2 cut(s)	1408, 2624
Tsp45I	GTSAC	2 cut(s)	1408, 2624
TspGWI	ACGGA	2 cut(s)	2163, 2215
TspRI	CASTG	8 cut(s)	15, 249, 486, 1125, 1225, 1819, 2098, 2618
Vha464I	CTTAAG	2 cut(s)	653, 1690
VpaK11BI	GGWCC	2 cut(s)	1942, 2463
VspI	ATTAAT	1 cut(s)	1652
XapI	RAATTY	7 cut(s)	1177, 1385, 1526, 1736, 1793, 1921, 2096
XceI	RCATGY	3 cut(s)	35, 341, 2340
XmiI	GTMKAC	1 cut(s)	496
XmnI	GAANNNNTTC	1 cut(s)	2169
XspI	CTAG	6 cut(s)	708, 900, 921, 1151, 2381, 2760
ZrmI	AGTACT	3 cut(s)	58, 1538, 1837
Zsp2I	ATGCAT	1 cut(s)	1987

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.