AT4G09680

CST, telomere maintenance, complex subunit CTC1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0006351
Physical Location & Seq
Forward (+)
6116699 .. 6123304
6606 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G09680.1

Sequence Viewer

Length: 3825 bp
ATGGAGAACACCACAATTCTCACGGTTAAGGACCTTGTCAACGAAGGAATAGCCGTCACCGGTGCATCGTCGCTATTCTCTTCCGCTGCTTCTCACTCGTCTTCCGAATCAACCAGTACGAACCCTAAATCACATCCCGGTGCCGTCGATTCAGACTTTAGCCGTAAGTTTCTCACACCGTTGAACTACCCAACGGTTATCTTCGGGACGGTAGCTCTTCCTTCCGAAACCCTAAAATGTCCGAATCGCTACTGCTTTCGATTCACAGACGGTGATTTGACAATCTGCTGTGATATCCTTGGATTCGAATTCCGCGCGATTGGGAGTAAGATTTGTGTTCTATCTTGGAATTTTCTTCCTATGAATCATTCTGGTGGATTTTTGGAGATAATCAACTGGAAATTTGTGGATAGTGGTAGTTTGCTATCTCGGTGTTCTGGAATTAGTTCGTTTCCATTGATTCCTTCTTTGTATTCATCGCAAAACGGTGACCGGAAGTCACGGTACAGCGTTTGTGGTGTGTTAGAGTCTATCAGCCCTGTGTCTGTTGTTCCTTGTATGGATGGGGTTTCAAGTGATTCTGTAAATCTTCCTGGGTTCTTAGTACATGTCATGGCTTGTGAGTGTAAAGTGTATAGCCGGGATGCGATTGATTGCGGTCACGCTTTTGAGAGGTCTGTATTTGTTTACTTCTGTGGTTTAGAGGCTGCGAGTTGGCATCCTGTGGTGATGAAGTTAGTTGGAAGAAATGTTGCTCTTTCCGGGTTGAAAAGGAAGTTGGTTTATGTAAGAGGTGATTCTCTGTTGGTGTTTGTGACTACTGAGAATTCTGTTCTTCATCCACCTTGGTTATCTAAGAAAGGGACAGTTTCGAAAACTGTTGTTGATAGGAGAGGTAACTGTGGTTCCTACCGTGGATATGTTAGAGGTTTGTATTTGAAAGGAAAGCTTGTTGAGATGGATGAAGATGTCTGGCTTTTATTGACGGATCAGATACTCAATAGATCACACAGTATCCGTACTGGTTCCCTTATTTTTATCAGAAATGTTCATTTTGTGAATACCAAATTTCCTTGGGGAGAAGTGCTTATACTTGGGGCATGCTTTAAGACTAGCATCACAGTTGAGTTTTTTTCACCTTTTGAAACGAGTTGTCTTGTAGATTCATGTCGGCAGACTTCTTTGAGTCTATACGTTGAGTCTTTGTCATTTCCTGCAAGATTATGGACATTACTAGTTCGTATCAGCTTCGAGAAATTTAATAGAATGCCATCAGACAAAGAAATATTAAGATCCTGTCAGAAGGATGAACTGACAAAGATGTATGCAGAGTCACGAATACCGCCATCCATGTTTCAACCTAGGGGTGGGATCTTTACTGAATTCTGCATGCATGAGTCATGCGGATGCAATAGTGAAGCTCGTGATTGCAACCTAAAACTGGTAATGCCCATCTCAAGTTTTGTCCACCACGTCAAGGTTATGCTGAATGAATTGCTTTCTCAGATTAAGAAAGACTTTAGTGCTAGTGATTGCTTAAGTCATTCATCGTCAACATGGAAAAGATACAATAATACAAACCCGAAGACTCTTAGAAGTGAGGATACTGGTGTCATCTTGCTTGGAAGATTGAAGATCTCATCTTCTGGAAGACTACAATTGCATGACAGAACTAGCAGTATTGATGTTCTGACTCCAGACCTTCTAAGTGATAGAAATGCGAGCAGGATATGTGAGGTTCCTGATTACTATCTTATTATAGAAGGAATACCTGAATCGATGCTTCACATGCCATTTCTTAAAAATCCCTTTCGCTGTAGTAGTGTGCTTAATCCCACTCCATTGGCCATAAAAAACACCTTGACAGTGCCTTTTTCTTTATCGCTTGGTACTGCAAGTTGCAAACATCTTCTCAAGCACCATCCTTTTGACTGGAGGCATGATTTCAATGAGTTCAAAGAGGGATTTTTTCATCTATTTAGGGTGACCCACAAATTTCCAATATTAAAAAATGGTCACCCAGGAATGCCTGACTGTACTAGTGTATTCATCGAGGCTTTAGTCCTTCCGTGGGATCTCATTTGCACTGTGACCGAAGAAGAGGCAGCTGCTCCCAATTTTGAAGAACATGATACTTCCCAAGAAATACGTCCACATAAGAGATGTAAAACTAATAATGGGCTACAGAGTCAAAGCTTTCTATCTGTGCCACATGAAATTTCTTGCCAGATGACCATCAGATGTGCTAGTAGTCACTGCTTGGTTGCAACAGCAACTCTTTCTAATTTGACGGAGAACAAAAGTGGTAAAATGCATAGTGCTATGCGTGTGCTGTTAGAATTCATACCTGAATGCAGTAACTATTATGGGTTACAGATTGGCGGTTGCTATTTGATGAAGCATGGCTCTGATGATTCCTTTTGTGTTGGACGGTCTGGCATATCTAACAATGATAAAATCAATTTTAGACCAGAAACACGTTTATGGAGTCTGGAATTTTCTTTCGACGAAGTTCTCACCCATGATGGATCTATGGATGTACATCCTCTGGTGTCTTCTCAACCATCTTTTGCGGTGGAACAGCAAAATGTTTCTAGTCGACAACCTTGTTCAGATGTTTCGCTTCTTCTCCCTTATGATGCAAAAGGACTCTTTTCAGTATTTCTCAACGACTTGGAAGGGCTTAATAAGCCATTGGCAGCTGGGAAGGACAATAATAATATATCATGCTGTACTCAGTCGGAGACAATAATGCATGCAGAGCCGTCTCGACTACTTCCTTCCAACAGCTTGTTTCCTGAAGGAAATCTTGCTACTTTCAGAGGTGACGTAGTAGCAGTTGACGCTGTTACCTCTTCTGTCGTTGATGTTTCAAGCAGCTATTGCATTAATGTTCTAGTCAATCATCAAATGGTGAAGATATTTGGTCCACTTAGAAGGCATTCATATCTCACTGGATTTGGCTTTGGGACGAATGCAACATTCTACCGGATTCTTGGAACGGGAGAGCAAAACAGCTTTGTGTTGACATCAGCATCGTTTATCAAAATAAACTCTCGAAAGGCATTGGATAGTCCGCCGTTAGAGAAACCGACTCACGGAGCTGCTTTGTGTCTGCCCAAAATTACACCTCAGGAATTCGTACCTTGCATTCTTGCTGGTCCTGCTTGTAATTCGTTCTCAGGAAACGAGGATAATCAGCAAATAAAGTTTGCCTGCAAGCAACAGGTTCTTTCAGTTTATCTTCTGGTTCTCCAAACTAGATCTGATGATCCCTCAGAAAACGAATGTAGGAACAATATTGATATACCACTTGCAGGATTTGTGGTAGATGACGGATCATCAACTTATCTTTGCTGGACGAGTGGGGAAAGAGCGTTTACAATTCTTAGGCTGCACGAAGAGTTACCTGAAGAAACCATTGATGTGGTACAGTGGACTAGAAGATACAGCAACTGGGGCACCACAGCTTACCATCTTGACCAAATTGTTCGGGTTCACAAGAGAATAGTGATGAAGTGCAATGGATCACAGATTGACGTACTCTTTCAAGACATCACCATTGCTGTTACTTCAGATCAACTTCTCACCAAATCAGAGGATAAGTTCCTCAAGTGGTTGATCCTAAATGCCATTAGCGGCCCCATATGGGAAGTTGCCGCGAGCTCAATGGACATGAAAATGATTGAGCATTTGGAGAGGGAACAGTGTGTGGAGATGGAGACATCAAGATATAATCTGCAGAGTGTTTGGGGTAATGAAGTATGCCAAGTGGATCCGTTGGTCCGAGCTTGGAGCTTACTCCAAGGTTTGCTAAATAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CTC1_2

Protein Analysis

1274

Amino Acids

142.18

Weight (kDa)

6.41

Isoelectric Point (pI)

45.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CTC1_2 PF15491 60 - 343 2.3e-131 CST, telomere maintenance, complex subunit CTC1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 140, 3461
AccI GTMKAC 1 cut(s) 2599
AccII CGCG 3 cut(s) 315, 317, 3662
AcoI YGGCCR 1 cut(s) 1845
AcuI CTGAAG 3 cut(s) 2820, 3432, 3558
AfiI CCNNNNNNNGG 7 cut(s) 1367, 1441, 1477, 2071, 3098, 3317, 3649
AflII CTTAAG 1 cut(s) 1537
AflIII ACRYGT 2 cut(s) 607, 2477
AgeI ACCGGT 1 cut(s) 59
AhdI GACNNNNNGTC 1 cut(s) 496
AhlI ACTAGT 2 cut(s) 1234, 2039
AjiI CACGTC 1 cut(s) 1474
AjnI CCWGG 2 cut(s) 592, 2020
AjuI GAANNNNNNNTTGG 2 cut(s) 761, 793
Alw21I GWGCWC 1 cut(s) 3668
Alw26I GTCTC 3 cut(s) 2738, 2772, 3716
AlwNI CAGNNNCTG 1 cut(s) 3456
AoxI GGCC 2 cut(s) 1845, 3640
ApeKI GCWGC 8 cut(s) 86, 707, 2105, 2108, 2699, 2877, 3104, 3394
AseI ATTAAT 1 cut(s) 2889
AsiGI ACCGGT 1 cut(s) 59
Asp700I GAANNNNTTC 2 cut(s) 445, 2941
AspA2I CCTAGG 1 cut(s) 1361
AspLEI GCGC 1 cut(s) 317
AspS9I GGNCC 5 cut(s) 31, 2927, 3161, 3641, 3784
AsuC2I CCSGG 3 cut(s) 138, 641, 763
AsuII TTCGAA 2 cut(s) 306, 872
AvaII GGWCC 4 cut(s) 31, 2927, 3161, 3784
AvrII CCTAGG 1 cut(s) 1361
AxyI CCTNAGG 1 cut(s) 3132
BaeGI GKGCMC 1 cut(s) 3464
BaeI ACNNNNGTAYC 2 cut(s) 1596, 1629
BalI TGGCCA 1 cut(s) 1847
BamHI GGATCC 1 cut(s) 3775
BanI GGYRCC 2 cut(s) 140, 3461
BanII GRGCYC 1 cut(s) 3668
BarI GAAGNNNNNNTAC 6 cut(s) 488, 520, 1074, 1106, 1588, 1620
BauI CACGAG 1 cut(s) 1422
BbsI GAAGAC 4 cut(s) 93, 1592, 1657, 2547
Bbv12I GWGCWC 1 cut(s) 3668
BbvI GCAGC 8 cut(s) 73, 694, 2095, 2117, 2711, 2889, 3091, 3381
BceAI ACGGC 5 cut(s) 38, 128, 147, 2749, 3064
BciT130I CCWGG 2 cut(s) 594, 2022
BciVI GTATCC 2 cut(s) 1025, 1597
BcnI CCSGG 3 cut(s) 138, 641, 763
BcoDI GTCTC 3 cut(s) 2738, 2772, 3716
BcuI ACTAGT 2 cut(s) 1234, 2039
BfmI CTRYAG 3 cut(s) 1816, 2183, 3740
BfrI CTTAAG 1 cut(s) 1537
BfuI GTATCC 2 cut(s) 1025, 1597
BglII AGATCT 2 cut(s) 1635, 3263
BlnI CCTAGG 1 cut(s) 1361
Bme1390I CCNGG 5 cut(s) 138, 594, 641, 763, 2022
Bme18I GGWCC 4 cut(s) 31, 2927, 3161, 3784
BmeRI GACNNNNNGTC 1 cut(s) 496
BmgBI CACGTC 1 cut(s) 1474
BmgT120I GGNCC 5 cut(s) 31, 2927, 3161, 3641, 3784
BmiI GGNNCC 7 cut(s) 142, 907, 1027, 1740, 3463, 3643, 3777
BmrFI CCNGG 5 cut(s) 138, 594, 641, 763, 2022
BmrI ACTGGG 1 cut(s) 3466
BmsI GCATC 8 cut(s) 74, 634, 727, 1125, 1397, 1770, 2629, 3044
BmuI ACTGGG 1 cut(s) 3466
BpiI GAAGAC 4 cut(s) 93, 1592, 1657, 2547
BpmI CTGGAG 2 cut(s) 1680, 1954
Bpu14I TTCGAA 2 cut(s) 306, 872
BpuEI CTTGAG 3 cut(s) 1441, 1898, 3596
BpuMI CCSGG 3 cut(s) 138, 641, 763
Bsa29I ATCGAT 1 cut(s) 1778
BsaBI GATNNNNATC 3 cut(s) 1749, 2234, 2541
BsaJI CCNNGG 9 cut(s) 298, 593, 845, 913, 1073, 1361, 2020, 2069, 3805
BsaWI WCCGGW 3 cut(s) 59, 492, 2988
Bsc4I CCNNNNNNNGG 7 cut(s) 1367, 1441, 1477, 2071, 3098, 3317, 3649
Bse118I RCCGGY 1 cut(s) 59
Bse1I ACTGG 8 cut(s) 114, 401, 1027, 1446, 1612, 1937, 2959, 3461
Bse21I CCTNAGG 1 cut(s) 3132
Bse3DI GCAATG 2 cut(s) 3529, 3561
Bse8I GATNNNNATC 3 cut(s) 1749, 2234, 2541
BseBI CCWGG 2 cut(s) 594, 2022
BseCI ATCGAT 1 cut(s) 1778
BseDI CCNNGG 9 cut(s) 298, 593, 845, 913, 1073, 1361, 2020, 2069, 3805
BseJI GATNNNNATC 3 cut(s) 1749, 2234, 2541
BseLI CCNNNNNNNGG 7 cut(s) 1367, 1441, 1477, 2071, 3098, 3317, 3649
BseMI GCAATG 2 cut(s) 3529, 3561
BseMII CTCAG 6 cut(s) 813, 1517, 2750, 3146, 3195, 3291
BseNI ACTGG 8 cut(s) 114, 401, 1027, 1446, 1612, 1937, 2959, 3461
BseSI GKGCMC 1 cut(s) 3464
BseXI GCAGC 8 cut(s) 73, 694, 2095, 2117, 2711, 2889, 3091, 3381
BseYI CCCAGC 1 cut(s) 2702
BsgI GTGCAG 1 cut(s) 3380
Bsh1236I CGCG 3 cut(s) 315, 317, 3662
BshFI GGCC 2 cut(s) 1847, 3642
BshNI GGYRCC 2 cut(s) 140, 3461
BshTI ACCGGT 1 cut(s) 59
BshVI ATCGAT 1 cut(s) 1778
BsiHKAI GWGCWC 1 cut(s) 3668
BsiSI CCGG 6 cut(s) 60, 138, 493, 640, 762, 2989
BslFI GGGAC 3 cut(s) 220, 877, 2983
BslI CCNNNNNNNGG 7 cut(s) 1367, 1441, 1477, 2071, 3098, 3317, 3649
BsmAI GTCTC 3 cut(s) 2738, 2772, 3716
BsmBI CGTCTC 1 cut(s) 2772
BsmFI GGGAC 3 cut(s) 220, 877, 2983
BsmI GAATGC 6 cut(s) 1272, 2031, 2357, 2941, 2980, 3150
BsnI GGCC 2 cut(s) 1847, 3642
Bsp119I TTCGAA 2 cut(s) 306, 872
Bsp1286I GDGCHC 2 cut(s) 3464, 3668
Bsp1407I TGTACA 1 cut(s) 2539
BspANI GGCC 2 cut(s) 1847, 3642
BspCNI CTCAG 6 cut(s) 814, 1516, 2749, 3145, 3194, 3290
BspDI ATCGAT 1 cut(s) 1778
BspFNI CGCG 3 cut(s) 315, 317, 3662
BspLI GGNNCC 7 cut(s) 142, 907, 1027, 1740, 3463, 3643, 3777
BspMAI CTGCAG 1 cut(s) 3744
BspQI GCTCTTC 1 cut(s) 222
BspT104I TTCGAA 2 cut(s) 306, 872
BspT107I GGYRCC 2 cut(s) 140, 3461
BspTI CTTAAG 1 cut(s) 1537
BsrDI GCAATG 2 cut(s) 3529, 3561
BsrFI RCCGGY 1 cut(s) 59
BsrGI TGTACA 1 cut(s) 2539
BsrI ACTGG 8 cut(s) 114, 401, 1027, 1446, 1612, 1937, 2959, 3461
BssAI RCCGGY 1 cut(s) 59
BssECI CCNNGG 9 cut(s) 298, 593, 845, 913, 1073, 1361, 2020, 2069, 3805
BssSI CACGAG 1 cut(s) 1422
BssT1I CCWWGG 5 cut(s) 298, 845, 1073, 1361, 3805
Bst2BI CACGAG 1 cut(s) 1422
Bst2UI CCWGG 2 cut(s) 594, 2022
Bst6I CTCTTC 5 cut(s) 85, 222, 2094, 2860, 3396
BstAFI CTTAAG 1 cut(s) 1537
BstAPI GCANNNNNTGC 1 cut(s) 2883
BstAUI TGTACA 1 cut(s) 2539
BstBI TTCGAA 2 cut(s) 306, 872
BstC8I GCNNGC 7 cut(s) 1102, 1391, 1723, 2757, 3217, 3221, 3664
BstDSI CCRYGG 2 cut(s) 913, 2069
BstEII GGTNACC 3 cut(s) 488, 1984, 2015
BstFNI CGCG 3 cut(s) 315, 317, 3662
BstHHI GCGC 1 cut(s) 317
BstMAI GTCTC 3 cut(s) 2738, 2772, 3716
BstMWI GCNNNNNNNGC 7 cut(s) 1789, 2689, 2761, 2843, 2883, 3164, 3459
BstNI CCWGG 2 cut(s) 594, 2022
BstNSI RCATGY 5 cut(s) 611, 1104, 1393, 1792, 2759
BstPI GGTNACC 3 cut(s) 488, 1984, 2015
BstSCI CCNGG 5 cut(s) 136, 592, 639, 761, 2020
BstSFI CTRYAG 3 cut(s) 1816, 2183, 3740
BstSLI GKGCMC 1 cut(s) 3464
BstUI CGCG 3 cut(s) 315, 317, 3662
BstV1I GCAGC 8 cut(s) 73, 694, 2095, 2117, 2711, 2889, 3091, 3381
BstV2I GAAGAC 4 cut(s) 93, 1592, 1657, 2547
BstX2I RGATCY 7 cut(s) 1292, 1371, 1635, 2074, 2528, 3263, 3775
BstXI CCANNNNNNTGG 2 cut(s) 1843, 3427
BstYI RGATCY 7 cut(s) 1292, 1371, 1635, 2074, 2528, 3263, 3775
Bsu15I ATCGAT 1 cut(s) 1778
Bsu36I CCTNAGG 1 cut(s) 3132
BsuI GTATCC 2 cut(s) 1025, 1597
BsuRI GGCC 2 cut(s) 1847, 3642
BsuTUI ATCGAT 1 cut(s) 1778
BtgI CCRYGG 2 cut(s) 913, 2069
BtgZI GCGATG 1 cut(s) 462
BtrI CACGTC 1 cut(s) 1474
BtsI GCAGTG 1 cut(s) 2254
BtsIMutI CAGTG 6 cut(s) 1872, 2085, 2254, 2952, 3440, 3713
Cac8I GCNNGC 7 cut(s) 1102, 1391, 1723, 2757, 3217, 3221, 3664
CaiI CAGNNNCTG 1 cut(s) 3456
CfoI GCGC 1 cut(s) 317
Cfr10I RCCGGY 1 cut(s) 59
Cfr13I GGNCC 5 cut(s) 31, 2927, 3161, 3641, 3784
ClaI ATCGAT 1 cut(s) 1778
CseI GACGC 1 cut(s) 2852
CspAI ACCGGT 1 cut(s) 59
DriI GACNNNNNGTC 1 cut(s) 496
EaeI YGGCCR 1 cut(s) 1845
Eam1104I CTCTTC 5 cut(s) 85, 222, 2094, 2860, 3396
Eam1105I GACNNNNNGTC 1 cut(s) 496
EarI CTCTTC 5 cut(s) 85, 222, 2094, 2860, 3396
EciI GGCGGA 1 cut(s) 3066
Ecl136II GAGCTC 1 cut(s) 3666
Eco130I CCWWGG 5 cut(s) 298, 845, 1073, 1361, 3805
Eco24I GRGCYC 1 cut(s) 3668
Eco32I GATATC 1 cut(s) 295
Eco47I GGWCC 4 cut(s) 31, 2927, 3161, 3784
Eco53kI GAGCTC 1 cut(s) 3666
Eco57I CTGAAG 3 cut(s) 2820, 3432, 3558
Eco81I CCTNAGG 1 cut(s) 3132
Eco91I GGTNACC 3 cut(s) 488, 1984, 2015
EcoICRI GAGCTC 1 cut(s) 3666
EcoO109I RGGNCCY 1 cut(s) 31
EcoO65I GGTNACC 3 cut(s) 488, 1984, 2015
EcoRI GAATTC 5 cut(s) 308, 826, 1382, 2339, 3137
EcoRII CCWGG 2 cut(s) 592, 2020
EcoRV GATATC 1 cut(s) 295
EcoT14I CCWWGG 5 cut(s) 298, 845, 1073, 1361, 3805
EcoT22I ATGCAT 3 cut(s) 1395, 2316, 2757
EcoT38I GRGCYC 1 cut(s) 3668
ErhI CCWWGG 5 cut(s) 298, 845, 1073, 1361, 3805
Esp3I CGTCTC 1 cut(s) 2772
FalI AAGNNNNNCTT 6 cut(s) 933, 965, 1502, 1534, 2793, 2825
FaqI GGGAC 3 cut(s) 220, 877, 2983
FauNDI CATATG 1 cut(s) 3647
FblI GTMKAC 1 cut(s) 2599
FriOI GRGCYC 1 cut(s) 3668
GlaI GCGC 1 cut(s) 316
GsaI CCCAGC 1 cut(s) 2706
GsuI CTGGAG 2 cut(s) 1680, 1954
HaeIII GGCC 2 cut(s) 1847, 3642
HapII CCGG 6 cut(s) 60, 138, 493, 640, 762, 2989
HgaI GACGC 1 cut(s) 2852
HhaI GCGC 1 cut(s) 317
Hin6I GCGC 1 cut(s) 315
HinP1I GCGC 1 cut(s) 315
HincII GTYRAC 5 cut(s) 40, 1554, 2600, 2842, 3027
HindII GTYRAC 5 cut(s) 40, 1554, 2600, 2842, 3027
HindIII AAGCTT 2 cut(s) 947, 2194
HpaII CCGG 6 cut(s) 60, 138, 493, 640, 762, 2989
Hpy99I CGWCG 3 cut(s) 73, 149, 2510
HpyCH4IV ACGT 6 cut(s) 1194, 1473, 2149, 2479, 2829, 3540
HpyF10VI GCNNNNNNNGC 7 cut(s) 1789, 2689, 2761, 2843, 2883, 3164, 3459
HpySE526I ACGT 6 cut(s) 1194, 1473, 2149, 2479, 2829, 3540
HspAI GCGC 1 cut(s) 315
LguI GCTCTTC 1 cut(s) 222
LmnI GCTCC 3 cut(s) 2116, 3101, 3795
Lsp1109I GCAGC 8 cut(s) 73, 694, 2095, 2117, 2711, 2889, 3091, 3381
LweI GCATC 8 cut(s) 74, 634, 727, 1125, 1397, 1770, 2629, 3044
MaeII ACGT 6 cut(s) 1194, 1473, 2149, 2479, 2829, 3540
MfeI CAATTG 1 cut(s) 1658
MflI RGATCY 7 cut(s) 1292, 1371, 1635, 2074, 2528, 3263, 3775
MhlI GDGCHC 2 cut(s) 3464, 3668
MlsI TGGCCA 1 cut(s) 1847
MluNI TGGCCA 1 cut(s) 1847
MmeI TCCRAC 4 cut(s) 721, 2407, 2721, 2808
Mox20I TGGCCA 1 cut(s) 1847
Mph1103I ATGCAT 3 cut(s) 1395, 2316, 2757
MroXI GAANNNNTTC 2 cut(s) 445, 2941
MscI TGGCCA 1 cut(s) 1847
MslI CAYNNNNRTG 6 cut(s) 138, 372, 1405, 2482, 3425, 3680
Msp20I TGGCCA 1 cut(s) 1847
MspA1I CMGCKG 3 cut(s) 86, 2108, 2702
MspCI CTTAAG 1 cut(s) 1537
MspI CCGG 6 cut(s) 60, 138, 493, 640, 762, 2989
MspR9I CCNGG 5 cut(s) 138, 594, 641, 763, 2022
MunI CAATTG 1 cut(s) 1658
Mva1269I GAATGC 6 cut(s) 1272, 2031, 2357, 2941, 2980, 3150
MvaI CCWGG 2 cut(s) 594, 2022
MvnI CGCG 3 cut(s) 315, 317, 3662
MwoI GCNNNNNNNGC 7 cut(s) 1789, 2689, 2761, 2843, 2883, 3164, 3459
NciI CCSGG 3 cut(s) 138, 641, 763
NdeI CATATG 1 cut(s) 3647
NlaIV GGNNCC 7 cut(s) 142, 907, 1027, 1740, 3463, 3643, 3777
NsiI ATGCAT 3 cut(s) 1395, 2316, 2757
NspI RCATGY 5 cut(s) 611, 1104, 1393, 1792, 2759
NspV TTCGAA 2 cut(s) 306, 872
PaeI GCATGC 3 cut(s) 1104, 1393, 2759
PciI ACATGT 1 cut(s) 607
PciSI GCTCTTC 1 cut(s) 222
PctI GAATGC 6 cut(s) 1272, 2031, 2357, 2941, 2980, 3150
PdmI GAANNNNTTC 2 cut(s) 445, 2941
PflFI GACNNNGTC 1 cut(s) 35
PinAI ACCGGT 1 cut(s) 59
PpuMI RGGWCCY 1 cut(s) 31
PscI ACATGT 1 cut(s) 607
PshBI ATTAAT 1 cut(s) 2889
Psp124BI GAGCTC 1 cut(s) 3668
Psp5II RGGWCCY 1 cut(s) 31
Psp6I CCWGG 2 cut(s) 592, 2020
PspEI GGTNACC 3 cut(s) 488, 1984, 2015
PspFI CCCAGC 1 cut(s) 2702
PspGI CCWGG 2 cut(s) 592, 2020
PspN4I GGNNCC 7 cut(s) 142, 907, 1027, 1740, 3463, 3643, 3777
PspPI GGNCC 5 cut(s) 31, 2927, 3161, 3641, 3784
PspPPI RGGWCCY 1 cut(s) 31
PsrI GAACNNNNNNTAC 2 cut(s) 889, 921
PstI CTGCAG 1 cut(s) 3744
PstNI CAGNNNCTG 1 cut(s) 3456
PsuI RGATCY 7 cut(s) 1292, 1371, 1635, 2074, 2528, 3263, 3775
PsyI GACNNNGTC 1 cut(s) 35
PvuII CAGCTG 2 cut(s) 2108, 2702
RseI CAYNNNNRTG 6 cut(s) 138, 372, 1405, 2482, 3425, 3680
SacI GAGCTC 1 cut(s) 3668
SalI GTCGAC 1 cut(s) 2598
SapI GCTCTTC 1 cut(s) 222
Sau96I GGNCC 5 cut(s) 31, 2927, 3161, 3641, 3784
ScrFI CCNGG 5 cut(s) 138, 594, 641, 763, 2022
SduI GDGCHC 2 cut(s) 3464, 3668
SfaNI GCATC 8 cut(s) 74, 634, 727, 1125, 1397, 1770, 2629, 3044
SfcI CTRYAG 3 cut(s) 1816, 2183, 3740
SfuI TTCGAA 2 cut(s) 306, 872
SgrAI CRCCGGYG 1 cut(s) 59
SinI GGWCC 4 cut(s) 31, 2927, 3161, 3784
SmiMI CAYNNNNRTG 6 cut(s) 138, 372, 1405, 2482, 3425, 3680
SmlI CTYRAG 4 cut(s) 1456, 1537, 1913, 3611
SmoI CTYRAG 4 cut(s) 1456, 1537, 1913, 3611
SpeI ACTAGT 2 cut(s) 1234, 2039
SphI GCATGC 3 cut(s) 1104, 1393, 2759
SspI AATATT 3 cut(s) 1287, 2004, 3301
SstI GAGCTC 1 cut(s) 3668
StyD4I CCNGG 5 cut(s) 136, 592, 639, 761, 2020
StyI CCWWGG 5 cut(s) 298, 845, 1073, 1361, 3805
TaiI ACGT 6 cut(s) 1197, 1476, 2152, 2482, 2832, 3543
TaqII GACCGA 1 cut(s) 2108
TatI WGTACW 4 cut(s) 604, 2036, 2539, 2732
TauI GCSGC 2 cut(s) 3642, 3662
TscAI CASTG 6 cut(s) 1872, 2092, 2261, 2959, 3440, 3713
TseI GCWGC 8 cut(s) 86, 707, 2105, 2108, 2699, 2877, 3104, 3394
TspGWI ACGGA 7 cut(s) 1001, 1007, 2058, 2306, 3114, 3351, 3768
TspRI CASTG 6 cut(s) 1872, 2092, 2261, 2959, 3440, 3713
Tth111I GACNNNGTC 1 cut(s) 35
Vha464I CTTAAG 1 cut(s) 1537
VpaK11BI GGWCC 4 cut(s) 31, 2927, 3161, 3784
VspI ATTAAT 1 cut(s) 2889
XceI RCATGY 5 cut(s) 611, 1104, 1393, 1792, 2759
XmaJI CCTAGG 1 cut(s) 1361
XmiI GTMKAC 1 cut(s) 2599
XmnI GAANNNNTTC 2 cut(s) 445, 2941
Zsp2I ATGCAT 3 cut(s) 1395, 2316, 2757
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.