Rh7DG370900

CST complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0006351
Physical Location & Seq
Forward (+)
50228186 .. 50235232
7047 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG370900.1

Sequence Viewer

Length: 4131 bp
ATGGAAAGTGTGAGAGTCTTGACAATCGCAGACTTACTCCAACGCGGCCGTTGCCTCACCGGAACCTCCTCTTTCGGTACCCCTTCATTTGCTCCAAAATCAAACCCCTCCATTTCTCCCATCCCCTCAAACCCTAACCCTAATGCCACCACTAAGGTTCTCCCCTCTCTCGACCGCTTTGCCCTCATCATCGGAACTATAACACTCCCCAGCGCCACCTCCGCCTCCGCTTCAATCGCCGCCGCTCCTCGATGCTCCTACAACACTTGCTTCCAATTCTCAGACAACTCGGCCGCCTCGATCTGCTGCGACGTTCTTGATTTCGATGCTCGGATTCTCGACAAGAGAATCAATGTTCTCGCTTGGAATTTCATTCCATTCAAACGTGGCGGTGGGTTCTTGGAGATTATCAGATGGGGGTTTCAGGATTCAATTGCTGGAATTTGGCCCTGTTCGAATATCATTTCTATGGAGTTAGGCTCTTCCACTGCTAATGCTAATGAAGACAGTTCCAAGGCTCGTCATGGTGTGTTCGGCGCACTGGAGTCGGTTAGCCCTTTCTCCATTGTTTCATGTAGAACAGGTGATAGCAATTCGAAAAGCAACAAGGCTTTGGATTCAGGCCCTGCGACAAGCCTCCGCGGCTTCTTAGTCCAATTTATGGTTTGTGAGTGTAGATCATGCAGTTCAAAGGAGTCAATCATGGTTTTGAAGGATTCAATTCAAGAAAGTGATACTCATTCTTTTACCAAACCAATGTTTGTATATTGTTGCGGTTCTGCTTCATCCTGGCATCCTGTATTTACGAAACTTGTGGGAAATATTGTTGCTCTATCAGGCTTGAAAAAGAAGTTGGTTTTTATAGGGAAGGAAGAGTCTAAAGTAATGTGTGTAACTACAGGAAGTTCTGCCTTGCATTTGAGCAGATTGTCCAAGAAATGGACGCCGAAAGTTACAGTAGGTAGAAAGGGAAATGGGGAAGTTGGTTCATATAGAGGGATAGTTAAAGGTGTGTATATGCAAGGAATGGTTTTGGAATTGGACAATGAGGTGTGGCTTTTGTTAACTGATCAACTGCTTACTCCACCACATAGTCTTAGGGCGGGTGCTCTCGTTTCTGTGAGAAATGCCCATTTTGTAAATCCCAGATTTTCTTGGACAAGAAGAATGCTTATACTTGGTGCTTGCTTTAGGACCAATGTAATTGTGGAATCCTTCTCTCCAATAGAAACTCGGTGTCATATAGCCTCACAATCACAGAGTTCCTTGGGGAAGTTCATCGAGTCCTTACCATTTTCTTCCAGATTATGGGTATTGCTGGTTGCCTCGTATTTCCGGAAAAAGTTTGCTGGTATCTTATCTGAGAAGGAAATTTTGGGCTCAAAACATAAGGGAGGATTAGTTGAGATGTTTGCTAGTTCACAGATGCCTTCGTCAAAGCATCAAACTCGGCCGGGAGTATTCATGGAATTTTGCAAGCATGATTCCTGTGCCTGTGGTTGTGAGCCATACATAGATAATCTGACTCTGGTGATCCCCTTGTCTTTTTTCATATGTCACTGTGAGCCCACATGGATGAGGGCACTGAACCTGGAAGGTAACAGTAGACAATTGCATGATGACAAACGGTACAGCCGTCAATTATGTGAAGGGAGATCTTATGTTCAGTCTATTAGAAAGATCTTTTCAAGTCAAGATATAGGCATAACTTTGGTTGGAAGTTTGAAGACTTCTCCATCTTCTGGAAGACTGCAGTTGGTTGATGCAACTGGTAGCATTGATGTTCTTGTACCAGACCTTCCATCAACTTGGGATGCCACTAGAATAATCAAGGTAGTTGACTACAGTGTAATTATTGAAGGCATGCCTGGGTCTGTGGATTCTGGAGCATTGCTTGAATATGATTTGTTCTCAACTCGAACTATCTTTGATTTTGTACCATTGGCAAGAAAGGTGAACTCAACAGTTTGTGTTTACTTTTGCTTGAGAAGTCCGTTGTGCAGAAATCTTTGCTTTTATCCTTGTACTGGATTGGGAGAAGATTTGAAGAGATTCGAAAGTGGAACATTTCACCTGCTATGGATTACCCACAAATTTCCTGTGCTACACAAGCTTCAAGGTGATGTGTTAACAAGCTCATCAAGCATGTTTGTTGAGGCTATAATCTTGCCATGGAATTTATCAGTTGCTGAAAACAATGGTATTGCGTTTCAAACTGGGGTAGTTGGGGATGATCCAAAAAATTCCATGGAATTTTGTGCTGTTGGATGTTACTTGAAGAATGATTCTTTCAAGAGACGGAAGGTTTGTGATTCATCAAGGAAGGAACTAAGTTCTGGTTCAATGGACTGTTCCTGTGAGGCCGTCGGAAAAGTGAATTCATGTTCTGAGTCTTACATTGAATCCAGTGAGGATTTAACATATAGCGACTTGAGTTGTCCTGAAATATCTGGTTTGGCTATAATTAGTGGAGTTACTCGTTCAGTTATCTTGTACCGTACAAAATTAAACAGTGGTGGCTTTTGCGGTCCAAGTGGACAGAAGATATTGCTCGAGTTTAAGTCTGACAGCTTTTATAAGTATCAGCTGTTGCAGATTGGCTGTTATTATATCACAAAGCATGATAGAGAAAATTCTTTTTGTAAACTTAAGGGCTCTGACTATTTCATTGGTAAAAAAATTCTCATCCCTCCCACAACTCATCTGTGGAGCCTTTCATTTGGTTCTGATAAGGTTTGTCAAAATAACAGTTCATCAAAGTGTATTCCATTGGATGATTCTCTTAGAAGTGACGAGCTTCTATCTGGATATCATAACGAAGTACTTCTTCAGACGTCCAATGAAAATTTGTCTGAAACCTCTTCAGACATGTGTCTTTGTCTGTCTGCAAGCATATTAGGTCTTGGAGAGCTGCACCTAAAGGAACTGAAAGAAAGCCTGATCAAGCCAGTTGTGACACCTAAAGACATTCCAAAAATCTCTTCATGCATTAGGCCTGTAACAACTGCGCCTCCACTATCAACTGAATCTAACCGTATGTTTCCTGAGGGAGACCTAATATCTATGCGTGGGCATGTGGTTGCGGTTCATAGCATTGAGGACAACTCTGTTGATCCATATTTGAACCGTCAAAACCTTCGTGATCCTCTTGAGCTGAGATTCTTGCAGAGGACAACAAGCAGTTGCATTCACGTGTTGGTGGATAACCAAATTGTAAAGCTATCTGGTTCTTTGCGCAAACATGATTTTCCAGTCGGATTTGGACCTGGTGTGGATGCAACGTTTTATCGGATTCTTGCACTGTGGGAGCAGAATAGATGGATCTTGACATCGGTATCATTTATTACCATCCATTCCATAAGTGGAGACAATGAATCATGTGGTGTCAAGTGCTCTAATCCTGCTTCATACATGCCCAGTGCTTCGCCTCAAGAGATTGTTCGTTCAGGGTTGATATCTGAATTGGTTCAAAGTTTGGACTTCAAGCCAGTGCTGTTGCATTGCAGGGTTGTTGCTATCCATTTCCTGGTTCTAGAGAAGAAAAGTAGAAATGTCAATTATCAACTAAAAAATCACTTGAGGCAGCATCTTGTTGATGTCCCACTTGCTGGCTTTGTTCTAGATGATGGTTCTTCTCCATGCTGTTGTTGGGCTAATGCTGAAAGAGCAGCAACCTTGCTGAGGCTGCATGAAGAATTCCCACAGTTCGCTTTTGAAAATAGTGGCTGGACCTTAAAGAGGGTCAGAAAGAACAATAATTCCTGGAGTTCCACTATCTATCATCTCGAGAGAATTTTAAATAATCATCATCGTATTGTAGTGAGGAACTATGGATCAATGTTTGATTCGTCTTATCAAGATCTCACTGTGTCTGTGAGTTCAGATAATGCCCTAAGCAGCTATGATGAAAACCTTCTGAAGTTTATAGTCTTCAATGCTTGCCTCAGCAAATTTTGGACCATTGGTGGTAGTAGGATGGATTTGGATGCTGTCAGGCTATTGAAGACAGAGAACCTTGTGGAAATGGAGATGTCTATGCAATCCATGCAACATATATGGGCCACAGAAGTTCGACACCTTAACCATCTGAGTCAGGCCAGGAATGTTATTCAAGAACTGATAGACGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CTC1_2

Protein Analysis

1376

Amino Acids

152.57

Weight (kDa)

8.3

Isoelectric Point (pI)

47.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CTC1_2 PF15491 61 - 370 1.3e-93 CST, telomere maintenance, complex subunit CTC1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2577
AarI CACCTGC 1 cut(s) 2082
AatII GACGTC 1 cut(s) 2837
Acc16I TGCGCA 1 cut(s) 3236
Acc36I ACCTGC 1 cut(s) 2082
Acc65I GGTACC 1 cut(s) 77
AccB1I GGYRCC 1 cut(s) 77
AccB7I CCANNNNNTGG 6 cut(s) 661, 939, 1308, 1742, 3526, 3608
AccBSI CCGCTC 1 cut(s) 245
AccI GTMKAC 1 cut(s) 1606
AccII CGCG 2 cut(s) 45, 642
AccIII TCCGGA 1 cut(s) 1335
AclI AACGTT 1 cut(s) 3281
AclWI GGATC 6 cut(s) 1528, 2228, 3107, 3137, 3329, 3841
AcoI YGGCCR 3 cut(s) 46, 291, 1451
AcuI CTGAAG 3 cut(s) 2813, 2847, 3938
AcvI CACGTG 1 cut(s) 3193
AcyI GRCGYC 2 cut(s) 944, 2834
AfaI GTAC 8 cut(s) 79, 1631, 1791, 1938, 2026, 2495, 2500, 2823
AfiI CCNNNNNNNGG 9 cut(s) 661, 939, 1308, 1742, 2027, 3526, 3608, 3681, 3738
AflII CTTAAG 1 cut(s) 2648
AflIII ACRYGT 2 cut(s) 2868, 3192
AjnI CCWGG 7 cut(s) 788, 1590, 1867, 3265, 3525, 3761, 4097
AjuI GAANNNNNNNTTGG 6 cut(s) 836, 868, 1358, 1390, 2965, 2997
AloI GAACNNNNNNTCC 2 cut(s) 3743, 3775
AluBI AGCT 9 cut(s) 2113, 2136, 2571, 2587, 2797, 2911, 3154, 3220, 3900
AluI AGCT 9 cut(s) 2113, 2136, 2571, 2587, 2797, 2911, 3154, 3220, 3900
Alw21I GWGCWC 2 cut(s) 1111, 3395
Alw26I GTCTC 3 cut(s) 2290, 3045, 3360
AlwI GGATC 6 cut(s) 1528, 2228, 3107, 3137, 3329, 3841
AlwNI CAGNNNCTG 2 cut(s) 626, 2189
Ama87I CYCGRG 2 cut(s) 2552, 3785
Aor13HI TCCGGA 1 cut(s) 1335
AoxI GGCC 9 cut(s) 46, 291, 446, 622, 1451, 2361, 2993, 4059, 4095
ApeKI GCWGC 6 cut(s) 306, 2911, 3583, 3668, 3685, 3897
ArsI GACNNNNNNTTYG 2 cut(s) 2289, 2321
Asp700I GAANNNNTTC 4 cut(s) 2051, 2823, 3465, 3912
Asp718I GGTACC 1 cut(s) 77
AspLEI GCGC 4 cut(s) 215, 539, 3010, 3237
AspS9I GGNCC 8 cut(s) 447, 623, 1194, 2528, 3263, 3729, 3957, 4059
AsuC2I CCSGG 1 cut(s) 1455
AsuHPI GGTGA 6 cut(s) 49, 596, 1543, 1966, 2063, 2132
AsuII TTCGAA 3 cut(s) 455, 596, 2055
AvaI CYCGRG 2 cut(s) 2552, 3785
AvaII GGWCC 5 cut(s) 1194, 2528, 3263, 3729, 3957
AxyI CCTNAGG 1 cut(s) 3045
BaeGI GKGCMC 1 cut(s) 1585
BaeI ACNNNNGTAYC 4 cut(s) 1621, 1654, 3318, 3351
BanI GGYRCC 1 cut(s) 77
BanII GRGCYC 3 cut(s) 1382, 1569, 2657
BarI GAAGNNNNNNTAC 2 cut(s) 1782, 1814
BbrPI CACGTG 1 cut(s) 3193
BbsI GAAGAC 5 cut(s) 510, 1733, 1753, 3922, 4010
Bbv12I GWGCWC 2 cut(s) 1111, 3395
BbvCI CCTCAGC 2 cut(s) 3680, 3944
BbvI GCAGC 6 cut(s) 293, 2898, 3595, 3672, 3680, 3909
BccI CCATC 9 cut(s) 128, 408, 1744, 1810, 3312, 3356, 3620, 3970, 4092
BceAI ACGGC 3 cut(s) 33, 1620, 2348
BcgI CGANNNNNNTGC 6 cut(s) 161, 195, 528, 562, 1430, 1464
BciT130I CCWGG 7 cut(s) 790, 1592, 1869, 3267, 3527, 3763, 4099
BclI TGATCA 2 cut(s) 1069, 2940
BcnI CCSGG 1 cut(s) 1455
BcoDI GTCTC 3 cut(s) 2290, 3045, 3360
BfaI CTAG 4 cut(s) 1416, 1821, 3533, 3620
BfmI CTRYAG 3 cut(s) 897, 1751, 1843
BfoI RGCGCY 1 cut(s) 216
BfrI CTTAAG 1 cut(s) 2648
BfuAI ACCTGC 1 cut(s) 2082
BglI GCCNNNNNGGC 1 cut(s) 642
BglII AGATCT 3 cut(s) 1655, 1680, 3859
BmcAI AGTACT 1 cut(s) 2823
Bme1390I CCNGG 8 cut(s) 790, 1455, 1592, 1869, 3267, 3527, 3763, 4099
Bme18I GGWCC 5 cut(s) 1194, 2528, 3263, 3729, 3957
BmeT110I CYCGRG 2 cut(s) 2552, 3785
BmgT120I GGNCC 8 cut(s) 447, 623, 1194, 2528, 3263, 3729, 3957, 4059
BmiI GGNNCC 3 cut(s) 64, 79, 2711
BmrFI CCNGG 8 cut(s) 790, 1455, 1592, 1869, 3267, 3527, 3763, 4099
BmrI ACTGGG 2 cut(s) 2226, 3411
BmuI ACTGGG 2 cut(s) 2226, 3411
BoxI GACNNNNGTC 1 cut(s) 2871
BpiI GAAGAC 5 cut(s) 510, 1733, 1753, 3922, 4010
BplI GAGNNNNNCTC 4 cut(s) 464, 496, 3089, 3121
BpmI CTGGAG 3 cut(s) 563, 1905, 3784
Bpu10I CCTNAGC 3 cut(s) 3680, 3893, 3944
Bpu14I TTCGAA 3 cut(s) 455, 596, 2055
BpuEI CTTGAG 5 cut(s) 2005, 2452, 3170, 3414, 3598
BpuMI CCSGG 1 cut(s) 1455
BsaAI YACGTR 1 cut(s) 3193
BsaHI GRCGYC 2 cut(s) 944, 2834
BsaI GGTCTC 1 cut(s) 3045
BsaJI CCNNGG 6 cut(s) 513, 640, 1266, 1868, 2171, 2247
BsaWI WCCGGW 2 cut(s) 59, 1335
BsaXI ACNNNNNCTCC 4 cut(s) 1386, 1416, 2995, 3025
Bsc4I CCNNNNNNNGG 9 cut(s) 661, 939, 1308, 1742, 2027, 3526, 3608, 3681, 3738
Bse1I ACTGG 9 cut(s) 546, 1774, 2032, 2221, 2406, 2948, 3251, 3417, 3488
Bse21I CCTNAGG 1 cut(s) 3045
Bse3DI GCAATG 2 cut(s) 1889, 3499
BseAI TCCGGA 1 cut(s) 1335
BseBI CCWGG 7 cut(s) 790, 1592, 1869, 3267, 3527, 3763, 4099
BseDI CCNNGG 6 cut(s) 513, 640, 1266, 1868, 2171, 2247
BseLI CCNNNNNNNGG 9 cut(s) 661, 939, 1308, 1742, 2027, 3526, 3608, 3681, 3738
BseMI GCAATG 2 cut(s) 1889, 3499
BseMII CTCAG 8 cut(s) 294, 1353, 2379, 3036, 3146, 3671, 3958, 4079
BseNI ACTGG 9 cut(s) 546, 1774, 2032, 2221, 2406, 2948, 3251, 3417, 3488
BseRI GAGGAG 2 cut(s) 58, 237
BseSI GKGCMC 1 cut(s) 1585
BseX3I CGGCCG 3 cut(s) 46, 291, 1451
BseXI GCAGC 6 cut(s) 293, 2898, 3595, 3672, 3680, 3909
BseYI CCCAGC 1 cut(s) 209
BsgI GTGCAG 2 cut(s) 2020, 2897
Bsh1236I CGCG 2 cut(s) 45, 642
Bsh1285I CGRYCG 4 cut(s) 49, 175, 294, 1454
BshFI GGCC 9 cut(s) 48, 293, 448, 624, 1453, 2363, 2995, 4061, 4097
BshNI GGYRCC 1 cut(s) 77
BsiEI CGRYCG 4 cut(s) 49, 175, 294, 1454
BsiHKAI GWGCWC 2 cut(s) 1111, 3395
BsiHKCI CYCGRG 2 cut(s) 2552, 3785
BsiSI CCGG 3 cut(s) 60, 1336, 1454
BslFI GGGAC 1 cut(s) 3584
BslI CCNNNNNNNGG 9 cut(s) 661, 939, 1308, 1742, 2027, 3526, 3608, 3681, 3738
BsmAI GTCTC 3 cut(s) 2290, 3045, 3360
BsmBI CGTCTC 1 cut(s) 2290
BsmFI GGGAC 1 cut(s) 3584
BsmI GAATGC 2 cut(s) 1173, 3186
BsnI GGCC 9 cut(s) 48, 293, 448, 624, 1453, 2363, 2995, 4061, 4097
Bso31I GGTCTC 1 cut(s) 3045
BsoBI CYCGRG 2 cut(s) 2552, 3785
Bsp119I TTCGAA 3 cut(s) 455, 596, 2055
Bsp1286I GDGCHC 6 cut(s) 1111, 1382, 1569, 1585, 2657, 3395
Bsp13I TCCGGA 1 cut(s) 1335
Bsp19I CCATGG 2 cut(s) 2171, 2247
BspANI GGCC 9 cut(s) 48, 293, 448, 624, 1453, 2363, 2995, 4061, 4097
BspCNI CTCAG 8 cut(s) 293, 1354, 2380, 3037, 3147, 3672, 3957, 4080
BspEI TCCGGA 1 cut(s) 1335
BspFNI CGCG 2 cut(s) 45, 642
BspLI GGNNCC 3 cut(s) 64, 79, 2711
BspMAI CTGCAG 1 cut(s) 1755
BspMI ACCTGC 1 cut(s) 2082
BspPI GGATC 6 cut(s) 1528, 2228, 3107, 3137, 3329, 3841
BspQI GCTCTTC 1 cut(s) 487
BspT104I TTCGAA 3 cut(s) 455, 596, 2055
BspT107I GGYRCC 1 cut(s) 77
BspTI CTTAAG 1 cut(s) 2648
BspTNI GGTCTC 1 cut(s) 3045
BsrBI CCGCTC 1 cut(s) 245
BsrDI GCAATG 2 cut(s) 1889, 3499
BsrI ACTGG 9 cut(s) 546, 1774, 2032, 2221, 2406, 2948, 3251, 3417, 3488
BssECI CCNNGG 6 cut(s) 513, 640, 1266, 1868, 2171, 2247
BssNI GRCGYC 2 cut(s) 944, 2834
BssT1I CCWWGG 4 cut(s) 513, 1266, 2171, 2247
Bst2UI CCWGG 7 cut(s) 790, 1592, 1869, 3267, 3527, 3763, 4099
Bst6I CTCTTC 5 cut(s) 487, 867, 2042, 2866, 2986
BstACI GRCGYC 2 cut(s) 944, 2834
BstAFI CTTAAG 1 cut(s) 2648
BstAPI GCANNNNNTGC 1 cut(s) 4045
BstBAI YACGTR 1 cut(s) 3193
BstBI TTCGAA 3 cut(s) 455, 596, 2055
BstC8I GCNNGC 6 cut(s) 1186, 1478, 1865, 2890, 3610, 3940
BstDSI CCRYGG 3 cut(s) 640, 2171, 2247
BstENI CCTNNNNNAGG 2 cut(s) 3679, 3736
BstFNI CGCG 2 cut(s) 45, 642
BstH2I RGCGCY 1 cut(s) 216
BstHHI GCGC 4 cut(s) 215, 539, 3010, 3237
BstMAI GTCTC 3 cut(s) 2290, 3045, 3360
BstMCI CGRYCG 4 cut(s) 49, 175, 294, 1454
BstMWI GCNNNNNNNGC 9 cut(s) 51, 221, 236, 642, 2110, 2142, 3665, 3685, 4045
BstNI CCWGG 7 cut(s) 790, 1592, 1869, 3267, 3527, 3763, 4099
BstNSI RCATGY 5 cut(s) 1867, 2149, 2872, 3077, 3415
BstPAI GACNNNNGTC 1 cut(s) 2871
BstSCI CCNGG 8 cut(s) 788, 1453, 1590, 1867, 3265, 3525, 3761, 4097
BstSFI CTRYAG 3 cut(s) 897, 1751, 1843
BstSLI GKGCMC 1 cut(s) 1585
BstUI CGCG 2 cut(s) 45, 642
BstV1I GCAGC 6 cut(s) 293, 2898, 3595, 3672, 3680, 3909
BstV2I GAAGAC 5 cut(s) 510, 1733, 1753, 3922, 4010
BstX2I RGATCY 4 cut(s) 1655, 1680, 3321, 3859
BstXI CCANNNNNNTGG 1 cut(s) 1809
BstYI RGATCY 4 cut(s) 1655, 1680, 3321, 3859
BstZI CGGCCG 3 cut(s) 46, 291, 1451
Bsu36I CCTNAGG 1 cut(s) 3045
BsuRI GGCC 9 cut(s) 48, 293, 448, 624, 1453, 2363, 2995, 4061, 4097
BtgI CCRYGG 3 cut(s) 640, 2171, 2247
BtsI GCAGTG 1 cut(s) 486
BveI ACCTGC 1 cut(s) 2082
Cac8I GCNNGC 6 cut(s) 1186, 1478, 1865, 2890, 3610, 3940
CaiI CAGNNNCTG 2 cut(s) 626, 2189
CfoI GCGC 4 cut(s) 215, 539, 3010, 3237
Cfr13I GGNCC 8 cut(s) 447, 623, 1194, 2528, 3263, 3729, 3957, 4059
Cfr42I CCGCGG 1 cut(s) 643
CseI GACGC 1 cut(s) 952
CsiI ACCWGGT 1 cut(s) 3265
Csp6I GTAC 8 cut(s) 78, 1630, 1790, 1937, 2025, 2494, 2499, 2822
CviQI GTAC 8 cut(s) 78, 1630, 1790, 1937, 2025, 2494, 2499, 2822
DraI TTTAAA 1 cut(s) 3798
EaeI YGGCCR 3 cut(s) 46, 291, 1451
EagI CGGCCG 3 cut(s) 46, 291, 1451
Eam1104I CTCTTC 5 cut(s) 487, 867, 2042, 2866, 2986
EarI CTCTTC 5 cut(s) 487, 867, 2042, 2866, 2986
EciI GGCGGA 1 cut(s) 211
EclXI CGGCCG 3 cut(s) 46, 291, 1451
Eco130I CCWWGG 4 cut(s) 513, 1266, 2171, 2247
Eco147I AGGCCT 1 cut(s) 2995
Eco24I GRGCYC 3 cut(s) 1382, 1569, 2657
Eco31I GGTCTC 1 cut(s) 3045
Eco32I GATATC 2 cut(s) 2810, 3456
Eco47I GGWCC 5 cut(s) 1194, 2528, 3263, 3729, 3957
Eco52I CGGCCG 3 cut(s) 46, 291, 1451
Eco57I CTGAAG 3 cut(s) 2813, 2847, 3938
Eco72I CACGTG 1 cut(s) 3193
Eco81I CCTNAGG 1 cut(s) 3045
Eco88I CYCGRG 2 cut(s) 2552, 3785
EcoNI CCTNNNNNAGG 2 cut(s) 3679, 3736
EcoO109I RGGNCCY 1 cut(s) 623
EcoRI GAATTC 2 cut(s) 2377, 3695
EcoRII CCWGG 7 cut(s) 788, 1590, 1867, 3265, 3525, 3761, 4097
EcoRV GATATC 2 cut(s) 2810, 3456
EcoT14I CCWWGG 4 cut(s) 513, 1266, 2171, 2247
EcoT22I ATGCAT 1 cut(s) 2990
EcoT38I GRGCYC 3 cut(s) 1382, 1569, 2657
ErhI CCWWGG 4 cut(s) 513, 1266, 2171, 2247
Esp3I CGTCTC 1 cut(s) 2290
FalI AAGNNNNNCTT 2 cut(s) 2811, 2843
FaqI GGGAC 1 cut(s) 3584
FauI CCCGC 1 cut(s) 1096
FauNDI CATATG 1 cut(s) 1553
FbaI TGATCA 2 cut(s) 1069, 2940
FblI GTMKAC 1 cut(s) 1606
FriOI GRGCYC 3 cut(s) 1382, 1569, 2657
FspBI CTAG 4 cut(s) 1416, 1821, 3533, 3620
FspI TGCGCA 1 cut(s) 3236
GlaI GCGC 4 cut(s) 214, 538, 3009, 3236
GsaI CCCAGC 1 cut(s) 213
GsuI CTGGAG 3 cut(s) 563, 1905, 3784
HaeII RGCGCY 1 cut(s) 216
HaeIII GGCC 9 cut(s) 48, 293, 448, 624, 1453, 2363, 2995, 4061, 4097
HapII CCGG 3 cut(s) 60, 1336, 1454
HgaI GACGC 1 cut(s) 952
HhaI GCGC 4 cut(s) 215, 539, 3010, 3237
Hin1I GRCGYC 2 cut(s) 944, 2834
Hin6I GCGC 4 cut(s) 213, 537, 3008, 3235
HinP1I GCGC 4 cut(s) 213, 537, 3008, 3235
HincII GTYRAC 3 cut(s) 1065, 1840, 2130
HindII GTYRAC 3 cut(s) 1065, 1840, 2130
HindIII AAGCTT 1 cut(s) 2111
HpaI GTTAAC 2 cut(s) 1065, 2130
HpaII CCGG 3 cut(s) 60, 1336, 1454
HphI GGTGA 6 cut(s) 49, 596, 1543, 1966, 2063, 2132
Hpy166II GTNNAC 9 cut(s) 1065, 1421, 1607, 1840, 1957, 1975, 2130, 2537, 2645
Hpy8I GTNNAC 9 cut(s) 1065, 1421, 1607, 1840, 1957, 1975, 2130, 2537, 2645
Hpy99I CGWCG 2 cut(s) 314, 2369
HpyCH4IV ACGT 5 cut(s) 312, 385, 2834, 3192, 3281
HpyF10VI GCNNNNNNNGC 9 cut(s) 51, 221, 236, 642, 2110, 2142, 3665, 3685, 4045
HpySE526I ACGT 5 cut(s) 312, 385, 2834, 3192, 3281
Hsp92I GRCGYC 2 cut(s) 944, 2834
HspAI GCGC 4 cut(s) 213, 537, 3008, 3235
Kpn2I TCCGGA 1 cut(s) 1335
KpnI GGTACC 1 cut(s) 81
Ksp22I TGATCA 2 cut(s) 1069, 2940
KspAI GTTAAC 2 cut(s) 1065, 2130
KspI CCGCGG 1 cut(s) 643
LguI GCTCTTC 1 cut(s) 487
LmnI GCTCC 6 cut(s) 97, 250, 260, 1886, 2709, 3307
Lsp1109I GCAGC 6 cut(s) 293, 2898, 3595, 3672, 3680, 3909
MabI ACCWGGT 1 cut(s) 3265
MaeI CTAG 4 cut(s) 1416, 1821, 3533, 3620
MaeII ACGT 5 cut(s) 312, 385, 2834, 3192, 3281
MaeIII GTNAC 9 cut(s) 892, 952, 1556, 1598, 2270, 2473, 2789, 2953, 2998
MbiI CCGCTC 1 cut(s) 245
MfeI CAATTG 2 cut(s) 432, 1610
MflI RGATCY 4 cut(s) 1655, 1680, 3321, 3859
MhlI GDGCHC 6 cut(s) 1111, 1382, 1569, 1585, 2657, 3395
MlyI GAGTC 8 cut(s) 24, 554, 704, 884, 1292, 1519, 2399, 4099
MmeI TCCRAC 5 cut(s) 64, 1696, 2245, 2347, 3235
Mph1103I ATGCAT 1 cut(s) 2990
MroI TCCGGA 1 cut(s) 1335
MroXI GAANNNNTTC 4 cut(s) 2051, 2823, 3465, 3912
MslI CAYNNNNRTG 4 cut(s) 467, 1574, 2758, 3191
MspA1I CMGCKG 2 cut(s) 642, 2587
MspCI CTTAAG 1 cut(s) 2648
MspI CCGG 3 cut(s) 60, 1336, 1454
MspR9I CCNGG 8 cut(s) 790, 1455, 1592, 1869, 3267, 3527, 3763, 4099
MunI CAATTG 2 cut(s) 432, 1610
Mva1269I GAATGC 2 cut(s) 1173, 3186
MvaI CCWGG 7 cut(s) 790, 1592, 1869, 3267, 3527, 3763, 4099
MvnI CGCG 2 cut(s) 45, 642
MwoI GCNNNNNNNGC 9 cut(s) 51, 221, 236, 642, 2110, 2142, 3665, 3685, 4045
NciI CCSGG 1 cut(s) 1455
NcoI CCATGG 2 cut(s) 2171, 2247
NdeI CATATG 1 cut(s) 1553
NlaIV GGNNCC 3 cut(s) 64, 79, 2711
NmeAIII GCCGAG 2 cut(s) 269, 1429
NmuCI GTSAC 3 cut(s) 1556, 2789, 2953
NsbI TGCGCA 1 cut(s) 3236
NsiI ATGCAT 1 cut(s) 2990
NspI RCATGY 5 cut(s) 1867, 2149, 2872, 3077, 3415
NspV TTCGAA 3 cut(s) 455, 596, 2055
PaeI GCATGC 1 cut(s) 1867
PaeR7I CTCGAG 2 cut(s) 2552, 3785
PaqCI CACCTGC 1 cut(s) 2082
PceI AGGCCT 1 cut(s) 2995
PciI ACATGT 1 cut(s) 2868
PciSI GCTCTTC 1 cut(s) 487
PcsI WCGNNNNNNNCGW 2 cut(s) 296, 1633
PctI GAATGC 2 cut(s) 1173, 3186
PdmI GAANNNNTTC 4 cut(s) 2051, 2823, 3465, 3912
PflMI CCANNNNNTGG 6 cut(s) 661, 939, 1308, 1742, 3526, 3608
PfoI TCCNGGA 1 cut(s) 3761
PleI GAGTC 8 cut(s) 23, 553, 703, 883, 1291, 1519, 2398, 4098
PmaCI CACGTG 1 cut(s) 3193
PmlI CACGTG 1 cut(s) 3193
PpsI GAGTC 8 cut(s) 23, 553, 703, 883, 1291, 1519, 2398, 4098
Ppu21I YACGTR 1 cut(s) 3193
PscI ACATGT 1 cut(s) 2868
PshAI GACNNNNGTC 1 cut(s) 2871
PsiI TTATAA 1 cut(s) 2577
Psp1406I AACGTT 1 cut(s) 3281
Psp6I CCWGG 7 cut(s) 788, 1590, 1867, 3265, 3525, 3761, 4097
PspCI CACGTG 1 cut(s) 3193
PspFI CCCAGC 1 cut(s) 209
PspGI CCWGG 7 cut(s) 788, 1590, 1867, 3265, 3525, 3761, 4097
PspN4I GGNNCC 3 cut(s) 64, 79, 2711
PspPI GGNCC 8 cut(s) 447, 623, 1194, 2528, 3263, 3729, 3957, 4059
PspXI VCTCGAGB 1 cut(s) 2552
PstI CTGCAG 1 cut(s) 1755
PstNI CAGNNNCTG 2 cut(s) 626, 2189
PsuI RGATCY 4 cut(s) 1655, 1680, 3321, 3859
PvuII CAGCTG 1 cut(s) 2587
RsaI GTAC 8 cut(s) 79, 1631, 1791, 1938, 2026, 2495, 2500, 2823
RsaNI GTAC 8 cut(s) 78, 1630, 1790, 1937, 2025, 2494, 2499, 2822
RseI CAYNNNNRTG 4 cut(s) 467, 1574, 2758, 3191
SacII CCGCGG 1 cut(s) 643
SapI GCTCTTC 1 cut(s) 487
Sau96I GGNCC 8 cut(s) 447, 623, 1194, 2528, 3263, 3729, 3957, 4059
ScaI AGTACT 1 cut(s) 2823
SchI GAGTC 8 cut(s) 24, 554, 704, 884, 1292, 1519, 2399, 4099
ScrFI CCNGG 8 cut(s) 790, 1455, 1592, 1869, 3267, 3527, 3763, 4099
SduI GDGCHC 6 cut(s) 1111, 1382, 1569, 1585, 2657, 3395
SexAI ACCWGGT 1 cut(s) 3265
SfcI CTRYAG 3 cut(s) 897, 1751, 1843
Sfr274I CTCGAG 2 cut(s) 2552, 3785
Sfr303I CCGCGG 1 cut(s) 643
SfuI TTCGAA 3 cut(s) 455, 596, 2055
SgrBI CCGCGG 1 cut(s) 643
SinI GGWCC 5 cut(s) 1194, 2528, 3263, 3729, 3957
SlaI CTCGAG 2 cut(s) 2552, 3785
SmiMI CAYNNNNRTG 4 cut(s) 467, 1574, 2758, 3191
SmlI CTYRAG 8 cut(s) 1984, 2431, 2552, 2648, 3149, 3429, 3577, 3785
SmoI CTYRAG 8 cut(s) 1984, 2431, 2552, 2648, 3149, 3429, 3577, 3785
SphI GCATGC 1 cut(s) 1867
SseBI AGGCCT 1 cut(s) 2995
SspI AATATT 1 cut(s) 823
SspMI CTAG 4 cut(s) 1416, 1821, 3533, 3620
StuI AGGCCT 1 cut(s) 2995
StyD4I CCNGG 8 cut(s) 788, 1453, 1590, 1867, 3265, 3525, 3761, 4097
StyI CCWWGG 4 cut(s) 513, 1266, 2171, 2247
TaiI ACGT 5 cut(s) 315, 388, 2837, 3195, 3284
TatI WGTACW 2 cut(s) 2024, 2821
TauI GCSGC 5 cut(s) 48, 242, 245, 296, 645
TseFI GTSAC 3 cut(s) 1556, 2789, 2953
TseI GCWGC 6 cut(s) 306, 2911, 3583, 3668, 3685, 3897
Tsp45I GTSAC 3 cut(s) 1556, 2789, 2953
TspGWI ACGGA 2 cut(s) 1983, 2314
Van91I CCANNNNNTGG 6 cut(s) 661, 939, 1308, 1742, 3526, 3608
Vha464I CTTAAG 1 cut(s) 2648
VpaK11BI GGWCC 5 cut(s) 1194, 2528, 3263, 3729, 3957
XagI CCTNNNNNAGG 2 cut(s) 3679, 3736
XbaI TCTAGA 2 cut(s) 3532, 3619
XceI RCATGY 5 cut(s) 1867, 2149, 2872, 3077, 3415
XcmI CCANNNNNNNNNTGG 3 cut(s) 1204, 3359, 3645
XhoI CTCGAG 2 cut(s) 2552, 3785
XmiI GTMKAC 1 cut(s) 1606
XmnI GAANNNNTTC 4 cut(s) 2051, 2823, 3465, 3912
XspI CTAG 4 cut(s) 1416, 1821, 3533, 3620
ZraI GACGTC 1 cut(s) 2835
ZrmI AGTACT 1 cut(s) 2823
Zsp2I ATGCAT 1 cut(s) 2990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.