Rorug07G0224600

CST complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0006351
Physical Location & Seq
Reverse (-)
20494636 .. 20497123
2488 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0224600.1

Sequence Viewer

Length: 2190 bp
ATGCATCGCCGCCTCTCCATTTTCACCCACAAGATTCTCACAAATCCCAATTGTATCCCCACCACCACCACCACCAAAGTCAGCTCCTTTAGTCCTAGAACCAACAGGTTAGGTTTACTGCGATTGCTTTCGTATACTCCATTGAATCGTCGCCCTGCTGATCCTGAAGACCCGTCCAATTTGATAAAGGAGGATGGGGTTTCGATTTTGTCCCAAATGTGGATTGAGAATTTTCGAGAACCTGATAGGATTGTGACCAATTTGACCTCTTACATTCGGAGATTCGAGCTGTGGGTGTTGGCTTATCAGAAGGTCTGTGCCGACGATATGGGGGCTTATATGCCCCGAAGTTCGATACAGAGGTCGGCACTTGAGGACTTATTAGGACTTAGAAATGCTGTTCTTGATGGTAGGTTTAGGTGGGGAGCTAGGCTAGAGTTTTATATTAAGTCACCCAAGGATAAGACCGATTACGAGTCTTTGTCGAAGAGGAAAATAAAGGCCATTTTGACCACCACGCAGCCGTCCCCGTTTCAAGATAAGTTGGTTCAGGAGGTGTTGTTGATGGTGTTGGAGCCGATATATGAGTCTCGGTTCTCGCAGAAGTCGTTTGCATTTAGACCGGGGAGAAATGCACATACTGCGTTGAGGGTGATTAGGAGGAGTTTTGCAGGGTATTTGTGGTATATAAAGGGGGATTTGAGTACAGTGTTGGATGGGATGAAGGTGGGGTTGGTGATTAATGCTCTAATCAGGGATGTGAGGGATAAGAAGGTAGTTGATTTGATTAAAACGGCATTGGTTACACCGGTGATTACAAGTAATGATGACGGTGTAGTGAAGAAGAAAAAGTCGAGGAAGTATCAGAAGAAGAGGGTGCTGGCAGAGGATGAACCGAAGCCAGACCCTTATTGGTTGGAGACGTTTTTTGGGTTTGCTCCTGAGGAGGCAGAGAAGCTTCCTTCTTGGGGGCATTGTGGGATACTCAGTCCCCTTTTGGCTAATATTTGTCTAGATGAATTGGACCGCTGGATGGAGGGAAAGATTAAGGAGTTTTATCATCCGTCAAAGAGTGATGTCATATGGAATAGCCCGGAAGGAGAATCAGAACAGGGAAATACGTCTTGGCCTGAATTTGTGCCAACAAGTGGCCCAGATAAGACCAGGAAGATGGATTATATAAGATATGGGGGTCATATTTTGATTGGTGTTCGAGGACCTCGAGCAGATGCAGCCACATTGAGAAAACAGTTGATTGAGTTCTGTGATCAAAAGTATATGCTCAAGCTAGACAATGAGAGTCTCCCTATAGAACACATAACTAAGGGTATATTGTTTCTTGATCATGTGTTGTGTCGCAGAGTTGTCTACCCAACGCTTCGTTACACTGCTACTGGTGGGAAAATTATTAGTGAGAAGGGTGTAGGCACTCTTTTATCAGTTACAGCAAGCTTGAAACAGTGCATCAAGCAATTTAGGAAACTGAGCTTTCTGAAGGGGGATAGGGATCCTGACCCACAGCCTTGTTTCAGAATGTTTCATGCCACTCAAGCTCATACTAATGCACAAATGAACAAGTTTCTGTCAACAATGGTCGAGTGGTATAGGTATGCAGATAATCGCAAAAAAGTTGTAAACTTTTGTGCTTACATTCTACGGGGTTCACTAGCAAAGCTTTATGCCGCAAAATACAAGCTCCGTTCACGTGCAAAGGTGTACAAGATTGGTGATAGGAATCTGAGTCGTCCTTTGAAGGAGAAGAAGGGGCAGTCACCTGAGTACCATAATTTGTTGAGGATGGGTCTTGTTGAGTCAATTGATGGGCTTCAGTATACCAGGATGTCTCTTGTACCTGAGACTGATTACACCCCTTTCCCGAGTAACTGGAGACCTGAACACGAGAAGGCATTGCTGGAATATATAAGGCTTGATGATCCAAAAACGTTAGAGGAGCAGCGCAGGTGTATCATGGATCAAGGTCTTGTTTCTCCGCAGGATTACATCTCAATGCTTGTTTGGAACTACAAGAGAAGTGCTATTCCGTTGGATCAGTTTACGTTTGTCAAAAGTGGCAGCAGTGACATTGAAAGAGATAAGCAATTCCTGCTTGGCTCAAATCAGGATAACCTTGAGAACAGAACTACAAAAGAGGAGGAAAAGGGTGAAGGGTTTTGTGTATCACAATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CTC1_2

Protein Analysis

729

Amino Acids

84.1

Weight (kDa)

9.41

Isoelectric Point (pI)

48.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Intron_maturas2 PF01348 481 - 584 9.7e-08 Type II intron maturase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1950
Acc36I ACCTGC 1 cut(s) 1950
AccB7I CCANNNNNTGG 1 cut(s) 1148
AccI GTMKAC 3 cut(s) 134, 1368, 1832
AciI CCGC 4 cut(s) 10, 1027, 1683, 1991
AclI AACGTT 1 cut(s) 1943
AclWI GGATC 6 cut(s) 155, 1502, 1515, 1928, 1980, 2055
AcsI RAATTY 2 cut(s) 229, 1133
AcuI CTGAAG 3 cut(s) 186, 1514, 1811
AcvI CACGTG 1 cut(s) 1706
AfaI GTAC 4 cut(s) 706, 1718, 1781, 1851
AfiI CCNNNNNNNGG 4 cut(s) 219, 968, 1033, 1148
AgeI ACCGGT 1 cut(s) 808
AgsI TTSAA 5 cut(s) 145, 536, 1456, 1753, 2087
AjnI CCWGG 2 cut(s) 1163, 1835
AjuI GAANNNNNNNTTGG 4 cut(s) 716, 748, 1108, 1140
Alw26I GTCTC 6 cut(s) 594, 914, 1307, 1848, 1850, 1882
AlwI GGATC 6 cut(s) 155, 1502, 1515, 1928, 1980, 2055
Ama87I CYCGRG 2 cut(s) 1221, 1876
AoxI GGCC 3 cut(s) 501, 1127, 1150
ApeKI GCWGC 4 cut(s) 520, 1232, 1954, 2073
ApoI RAATTY 2 cut(s) 229, 1133
AseI ATTAAT 1 cut(s) 741
AsiGI ACCGGT 1 cut(s) 808
AspLEI GCGC 1 cut(s) 1959
AspS9I GGNCC 3 cut(s) 1024, 1151, 1217
AsuC2I CCSGG 2 cut(s) 624, 1094
AsuHPI GGTGA 8 cut(s) 16, 444, 664, 748, 823, 1739, 1764, 2174
AvaI CYCGRG 2 cut(s) 1221, 1876
AvaII GGWCC 2 cut(s) 1024, 1217
AxyI CCTNAGG 1 cut(s) 942
BaeI ACNNNNGTAYC 4 cut(s) 347, 380, 1763, 1796
BamHI GGATCC 1 cut(s) 1507
BauI CACGAG 1 cut(s) 1898
BbrPI CACGTG 1 cut(s) 1706
BbsI GAAGAC 1 cut(s) 174
BbvI GCAGC 4 cut(s) 532, 1244, 1966, 2085
BccI CCATC 8 cut(s) 188, 401, 559, 710, 1027, 1165, 1792, 1814
BceAI ACGGC 2 cut(s) 508, 810
BciT130I CCWGG 2 cut(s) 1165, 1837
BciVI GTATCC 2 cut(s) 65, 975
BclI TGATCA 2 cut(s) 1267, 1342
BcnI CCSGG 2 cut(s) 624, 1094
BcoDI GTCTC 6 cut(s) 594, 914, 1307, 1848, 1850, 1882
BfaI CTAG 6 cut(s) 96, 429, 434, 1013, 1289, 1667
BfmI CTRYAG 1 cut(s) 1308
BfuAI ACCTGC 1 cut(s) 1950
BfuI GTATCC 2 cut(s) 65, 975
BisI GCNGC 6 cut(s) 10, 521, 1233, 1683, 1955, 2074
BlsI GCNGC 6 cut(s) 11, 522, 1234, 1684, 1956, 2075
Bme1390I CCNGG 4 cut(s) 624, 1094, 1165, 1837
Bme18I GGWCC 2 cut(s) 1024, 1217
BmeT110I CYCGRG 2 cut(s) 1221, 1876
BmgT120I GGNCC 3 cut(s) 1024, 1151, 1217
BmiI GGNNCC 2 cut(s) 576, 1509
BmrFI CCNGG 4 cut(s) 624, 1094, 1165, 1837
BmsI GCATC 3 cut(s) 13, 1219, 1473
BpiI GAAGAC 1 cut(s) 174
BpmI CTGGAG 1 cut(s) 1906
BpuEI CTTGAG 4 cut(s) 392, 1268, 1533, 2150
BpuMI CCSGG 2 cut(s) 624, 1094
BsaAI YACGTR 1 cut(s) 1706
BsaBI GATNNNNATC 2 cut(s) 1506, 1734
BsaI GGTCTC 1 cut(s) 1882
BsaJI CCNNGG 2 cut(s) 456, 623
BsaWI WCCGGW 1 cut(s) 808
BsaXI ACNNNNNCTCC 2 cut(s) 545, 575
Bsc4I CCNNNNNNNGG 4 cut(s) 219, 968, 1033, 1148
Bse118I RCCGGY 1 cut(s) 808
Bse1I ACTGG 2 cut(s) 1399, 1889
Bse21I CCTNAGG 1 cut(s) 942
Bse3DI GCAATG 1 cut(s) 1907
Bse8I GATNNNNATC 2 cut(s) 1506, 1734
BseBI CCWGG 2 cut(s) 1165, 1837
BseDI CCNNGG 2 cut(s) 456, 623
BseGI GGATG 9 cut(s) 199, 721, 726, 763, 895, 1038, 1060, 1803, 1845
BseJI GATNNNNATC 2 cut(s) 1506, 1734
BseLI CCNNNNNNNGG 4 cut(s) 219, 968, 1033, 1148
BseMI GCAATG 1 cut(s) 1907
BseMII CTCAG 6 cut(s) 933, 1000, 1475, 1730, 1767, 1845
BseNI ACTGG 2 cut(s) 1399, 1889
BseRI GAGGAG 4 cut(s) 676, 959, 1964, 2165
BseXI GCAGC 4 cut(s) 532, 1244, 1966, 2085
BshFI GGCC 3 cut(s) 503, 1129, 1152
BshTI ACCGGT 1 cut(s) 808
BsiHKCI CYCGRG 2 cut(s) 1221, 1876
BsiSI CCGG 3 cut(s) 623, 809, 1094
BslFI GGGAC 3 cut(s) 196, 511, 975
BslI CCNNNNNNNGG 4 cut(s) 219, 968, 1033, 1148
BsmAI GTCTC 6 cut(s) 594, 914, 1307, 1848, 1850, 1882
BsmBI CGTCTC 1 cut(s) 914
BsmFI GGGAC 3 cut(s) 196, 511, 975
BsnI GGCC 3 cut(s) 503, 1129, 1152
Bso31I GGTCTC 1 cut(s) 1882
BsoBI CYCGRG 2 cut(s) 1221, 1876
Bsp1407I TGTACA 1 cut(s) 1716
Bsp143I GATC 7 cut(s) 160, 1267, 1342, 1507, 1933, 1972, 2047
BspACI CCGC 4 cut(s) 10, 1027, 1683, 1991
BspANI GGCC 3 cut(s) 503, 1129, 1152
BspCNI CTCAG 6 cut(s) 934, 999, 1476, 1731, 1768, 1846
BspLI GGNNCC 2 cut(s) 576, 1509
BspMI ACCTGC 1 cut(s) 1950
BspPI GGATC 6 cut(s) 155, 1502, 1515, 1928, 1980, 2055
BspTNI GGTCTC 1 cut(s) 1882
BsrDI GCAATG 1 cut(s) 1907
BsrFI RCCGGY 1 cut(s) 808
BsrGI TGTACA 1 cut(s) 1716
BsrI ACTGG 2 cut(s) 1399, 1889
BssAI RCCGGY 1 cut(s) 808
BssECI CCNNGG 2 cut(s) 456, 623
BssMI GATC 7 cut(s) 160, 1267, 1342, 1507, 1933, 1972, 2047
BssNAI GTATAC 2 cut(s) 135, 1833
BssSI CACGAG 1 cut(s) 1898
BssT1I CCWWGG 1 cut(s) 456
Bst1107I GTATAC 2 cut(s) 135, 1833
Bst2BI CACGAG 1 cut(s) 1898
Bst2UI CCWGG 2 cut(s) 1165, 1837
Bst4CI ACNGT 4 cut(s) 709, 833, 1251, 1461
Bst6I CTCTTC 2 cut(s) 482, 866
BstAPI GCANNNNNTGC 2 cut(s) 641, 2104
BstAUI TGTACA 1 cut(s) 1716
BstBAI YACGTR 1 cut(s) 1706
BstC8I GCNNGC 2 cut(s) 882, 1450
BstDEI CTNAG 8 cut(s) 389, 942, 986, 1323, 1484, 1739, 1776, 1854
BstF5I GGATG 9 cut(s) 199, 721, 726, 763, 895, 1038, 1060, 1803, 1845
BstHHI GCGC 1 cut(s) 1959
BstKTI GATC 7 cut(s) 163, 1270, 1345, 1510, 1936, 1975, 2050
BstMAI GTCTC 6 cut(s) 594, 914, 1307, 1848, 1850, 1882
BstMBI GATC 7 cut(s) 160, 1267, 1342, 1507, 1933, 1972, 2047
BstMWI GCNNNNNNNGC 4 cut(s) 641, 1232, 1550, 2104
BstNI CCWGG 2 cut(s) 1165, 1837
BstSCI CCNGG 4 cut(s) 622, 1092, 1163, 1835
BstSFI CTRYAG 1 cut(s) 1308
BstV1I GCAGC 4 cut(s) 532, 1244, 1966, 2085
BstV2I GAAGAC 1 cut(s) 174
BstX2I RGATCY 1 cut(s) 1507
BstXI CCANNNNNNTGG 1 cut(s) 1171
BstYI RGATCY 1 cut(s) 1507
BstZ17I GTATAC 2 cut(s) 135, 1833
Bsu36I CCTNAGG 1 cut(s) 942
BsuI GTATCC 2 cut(s) 65, 975
BsuRI GGCC 3 cut(s) 503, 1129, 1152
BtsCI GGATG 9 cut(s) 199, 721, 726, 763, 895, 1038, 1060, 1803, 1845
BtsI GCAGTG 2 cut(s) 1386, 2083
BtsIMutI CAGTG 4 cut(s) 714, 1386, 1466, 2083
BveI ACCTGC 1 cut(s) 1950
Cac8I GCNNGC 2 cut(s) 882, 1450
CfoI GCGC 1 cut(s) 1959
Cfr10I RCCGGY 1 cut(s) 808
Cfr13I GGNCC 3 cut(s) 1024, 1151, 1217
Csp6I GTAC 4 cut(s) 705, 1717, 1780, 1850
CspAI ACCGGT 1 cut(s) 808
CviAII CATG 3 cut(s) 1346, 1541, 1969
CviQI GTAC 4 cut(s) 705, 1717, 1780, 1850
DdeI CTNAG 8 cut(s) 389, 942, 986, 1323, 1484, 1739, 1776, 1854
DpnI GATC 7 cut(s) 162, 1269, 1344, 1509, 1935, 1974, 2049
DpnII GATC 7 cut(s) 160, 1267, 1342, 1507, 1933, 1972, 2047
Eam1104I CTCTTC 2 cut(s) 482, 866
EarI CTCTTC 2 cut(s) 482, 866
Eco130I CCWWGG 1 cut(s) 456
Eco31I GGTCTC 1 cut(s) 1882
Eco47I GGWCC 2 cut(s) 1024, 1217
Eco57I CTGAAG 3 cut(s) 186, 1514, 1811
Eco72I CACGTG 1 cut(s) 1706
Eco81I CCTNAGG 1 cut(s) 942
Eco88I CYCGRG 2 cut(s) 1221, 1876
EcoO109I RGGNCCY 1 cut(s) 1217
EcoRII CCWGG 2 cut(s) 1163, 1835
EcoT14I CCWWGG 1 cut(s) 456
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 456
Esp3I CGTCTC 1 cut(s) 914
FaeI CATG 3 cut(s) 1349, 1544, 1972
FaqI GGGAC 3 cut(s) 196, 511, 975
FatI CATG 3 cut(s) 1345, 1540, 1968
FauNDI CATATG 1 cut(s) 1082
FbaI TGATCA 2 cut(s) 1267, 1342
FblI GTMKAC 3 cut(s) 134, 1368, 1832
Fnu4HI GCNGC 6 cut(s) 10, 521, 1233, 1683, 1955, 2074
FokI GGATG 9 cut(s) 206, 728, 733, 770, 902, 1045, 1047, 1810, 1852
Fsp4HI GCNGC 6 cut(s) 10, 521, 1233, 1683, 1955, 2074
FspBI CTAG 6 cut(s) 96, 429, 434, 1013, 1289, 1667
GlaI GCGC 1 cut(s) 1958
GluI GCNGC 6 cut(s) 10, 521, 1233, 1683, 1955, 2074
GsuI CTGGAG 1 cut(s) 1906
HaeIII GGCC 3 cut(s) 503, 1129, 1152
HapII CCGG 3 cut(s) 623, 809, 1094
HhaI GCGC 1 cut(s) 1959
Hin1II CATG 3 cut(s) 1349, 1544, 1972
Hin6I GCGC 1 cut(s) 1957
HinP1I GCGC 1 cut(s) 1957
HincII GTYRAC 1 cut(s) 1587
HindII GTYRAC 1 cut(s) 1587
HindIII AAGCTT 3 cut(s) 956, 1450, 1673
HpaII CCGG 3 cut(s) 623, 809, 1094
HphI GGTGA 8 cut(s) 16, 444, 664, 748, 823, 1739, 1764, 2174
Hpy188I TCNGA 7 cut(s) 279, 309, 867, 1108, 1494, 1532, 1740
Hpy99I CGWCG 2 cut(s) 153, 326
HpyCH4III ACNGT 4 cut(s) 709, 833, 1251, 1461
HpyCH4IV ACGT 5 cut(s) 923, 1121, 1705, 1943, 2057
HpyCH4V TGCA 9 cut(s) 4, 614, 635, 671, 1232, 1464, 1565, 1613, 1709
HpyF10VI GCNNNNNNNGC 4 cut(s) 641, 1232, 1550, 2104
HpyF3I CTNAG 8 cut(s) 389, 942, 986, 1323, 1484, 1739, 1776, 1854
HpySE526I ACGT 5 cut(s) 923, 1121, 1705, 1943, 2057
Hsp92II CATG 3 cut(s) 1349, 1544, 1972
HspAI GCGC 1 cut(s) 1957
Ksp22I TGATCA 2 cut(s) 1267, 1342
Kzo9I GATC 7 cut(s) 160, 1267, 1342, 1507, 1933, 1972, 2047
LmnI GCTCC 6 cut(s) 89, 425, 574, 943, 1701, 1951
Lsp1109I GCAGC 4 cut(s) 532, 1244, 1966, 2085
LweI GCATC 3 cut(s) 13, 1219, 1473
MaeI CTAG 6 cut(s) 96, 429, 434, 1013, 1289, 1667
MaeII ACGT 5 cut(s) 923, 1121, 1705, 1943, 2057
MaeIII GTNAC 8 cut(s) 253, 450, 802, 1382, 1441, 1770, 1880, 2078
MalI GATC 7 cut(s) 162, 1269, 1344, 1509, 1935, 1974, 2049
MboI GATC 7 cut(s) 160, 1267, 1342, 1507, 1933, 1972, 2047
MboII GAAGA 8 cut(s) 179, 499, 853, 856, 880, 883, 1180, 1771
MfeI CAATTG 3 cut(s) 49, 1815, 2183
MflI RGATCY 1 cut(s) 1507
MlyI GAGTC 5 cut(s) 485, 596, 1309, 1750, 1820
MmeI TCCRAC 4 cut(s) 552, 693, 897, 2025
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 4 cut(s) 447, 741, 789, 1047
MslI CAYNNNNRTG 2 cut(s) 1560, 2006
MspA1I CMGCKG 1 cut(s) 1029
MspI CCGG 3 cut(s) 623, 809, 1094
MspR9I CCNGG 4 cut(s) 624, 1094, 1165, 1837
MunI CAATTG 3 cut(s) 49, 1815, 2183
MvaI CCWGG 2 cut(s) 1165, 1837
MwoI GCNNNNNNNGC 4 cut(s) 641, 1232, 1550, 2104
NciI CCSGG 2 cut(s) 624, 1094
NdeI CATATG 1 cut(s) 1082
NdeII GATC 7 cut(s) 160, 1267, 1342, 1507, 1933, 1972, 2047
NlaIII CATG 3 cut(s) 1349, 1544, 1972
NlaIV GGNNCC 2 cut(s) 576, 1509
NmuCI GTSAC 4 cut(s) 253, 450, 1770, 2078
NsiI ATGCAT 1 cut(s) 6
PaeR7I CTCGAG 1 cut(s) 1221
PaqCI CACCTGC 1 cut(s) 1950
PcsI WCGNNNNNNNCGW 2 cut(s) 605, 1219
PfeI GAWTC 5 cut(s) 34, 145, 282, 1103, 1735
PflMI CCANNNNNTGG 1 cut(s) 1148
PinAI ACCGGT 1 cut(s) 808
PkrI GCNGC 6 cut(s) 11, 522, 1234, 1684, 1956, 2075
PleI GAGTC 5 cut(s) 484, 595, 1308, 1749, 1819
PmaCI CACGTG 1 cut(s) 1706
PmlI CACGTG 1 cut(s) 1706
PpsI GAGTC 5 cut(s) 484, 595, 1308, 1749, 1819
Ppu21I YACGTR 1 cut(s) 1706
PpuMI RGGWCCY 1 cut(s) 1217
PshBI ATTAAT 1 cut(s) 741
Psp1406I AACGTT 1 cut(s) 1943
Psp5II RGGWCCY 1 cut(s) 1217
Psp6I CCWGG 2 cut(s) 1163, 1835
PspCI CACGTG 1 cut(s) 1706
PspGI CCWGG 2 cut(s) 1163, 1835
PspN4I GGNNCC 2 cut(s) 576, 1509
PspPI GGNCC 3 cut(s) 1024, 1151, 1217
PspPPI RGGWCCY 1 cut(s) 1217
PspXI VCTCGAGB 1 cut(s) 1221
PsuI RGATCY 1 cut(s) 1507
RsaI GTAC 4 cut(s) 706, 1718, 1781, 1851
RsaNI GTAC 4 cut(s) 705, 1717, 1780, 1850
RseI CAYNNNNRTG 2 cut(s) 1560, 2006
SaqAI TTAA 4 cut(s) 447, 741, 789, 1047
SatI GCNGC 6 cut(s) 10, 521, 1233, 1683, 1955, 2074
Sau3AI GATC 7 cut(s) 160, 1267, 1342, 1507, 1933, 1972, 2047
Sau96I GGNCC 3 cut(s) 1024, 1151, 1217
SchI GAGTC 5 cut(s) 485, 596, 1309, 1750, 1820
ScrFI CCNGG 4 cut(s) 624, 1094, 1165, 1837
SfaNI GCATC 3 cut(s) 13, 1219, 1473
SfcI CTRYAG 1 cut(s) 1308
Sfr274I CTCGAG 1 cut(s) 1221
SgrAI CRCCGGYG 1 cut(s) 808
SinI GGWCC 2 cut(s) 1024, 1217
SlaI CTCGAG 1 cut(s) 1221
SmiMI CAYNNNNRTG 2 cut(s) 1560, 2006
SmlI CTYRAG 5 cut(s) 371, 1221, 1283, 1548, 2129
SmoI CTYRAG 5 cut(s) 371, 1221, 1283, 1548, 2129
SsiI CCGC 4 cut(s) 10, 1027, 1683, 1991
SspI AATATT 1 cut(s) 1006
SspMI CTAG 6 cut(s) 96, 429, 434, 1013, 1289, 1667
StyD4I CCNGG 4 cut(s) 622, 1092, 1163, 1835
StyI CCWWGG 1 cut(s) 456
TaaI ACNGT 4 cut(s) 709, 833, 1251, 1461
TaiI ACGT 5 cut(s) 926, 1124, 1708, 1946, 2060
TaqI TCGA 9 cut(s) 203, 235, 285, 353, 485, 854, 1213, 1222, 1596
TaqII GACCGA 1 cut(s) 482
TatI WGTACW 2 cut(s) 704, 1716
TauI GCSGC 2 cut(s) 12, 1685
TfiI GAWTC 5 cut(s) 34, 145, 282, 1103, 1735
Tru1I TTAA 4 cut(s) 447, 741, 789, 1047
Tru9I TTAA 4 cut(s) 447, 741, 789, 1047
TscAI CASTG 4 cut(s) 714, 1393, 1466, 2083
TseFI GTSAC 4 cut(s) 253, 450, 1770, 2078
TseI GCWGC 4 cut(s) 520, 1232, 1954, 2073
Tsp45I GTSAC 4 cut(s) 253, 450, 1770, 2078
TspDTI ATGAA 5 cut(s) 737, 906, 1032, 1529, 1586
TspGWI ACGGA 3 cut(s) 1053, 1688, 2031
TspRI CASTG 4 cut(s) 714, 1393, 1466, 2083
Van91I CCANNNNNTGG 1 cut(s) 1148
VpaK11BI GGWCC 2 cut(s) 1024, 1217
VspI ATTAAT 1 cut(s) 741
XapI RAATTY 2 cut(s) 229, 1133
XbaI TCTAGA 1 cut(s) 1012
XcmI CCANNNNNNNNNTGG 1 cut(s) 909
XhoI CTCGAG 1 cut(s) 1221
XmiI GTMKAC 3 cut(s) 134, 1368, 1832
XspI CTAG 6 cut(s) 96, 429, 434, 1013, 1289, 1667
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.