FvH4_5g30300

CST complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0006351
Physical Location & Seq
Forward (+)
21206360 .. 21214317
7958 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g30300.t3

Sequence Viewer

Length: 4134 bp
ATGGAAAATGTGAAGGTCCTCACAATCGCAGAGTTACTCCAACGCGGCCGTTGCCTCACCGGAGCCTCCTCTTTCGGTACCCCTTCAATTGCTCCCAATTCAAACCAAACCTCAAACCCCTCCATTTCTCCCACCCACTCAAACCCTAACCCTAATTCCACCACCAAGGTCCTCCCTTCTCTCCACCATTTCGCCCTCCTCATCGGAACCGTAACCCTCCCCACCGCCACCACCGCTTCCGCTCCAGACGCCGCCGCCGCCGCCGCTCCTCGATGCTCCTACAACACTTGCTTCCAATTCTCCGACGAATCCGCCGCCTCGATCTGCTGCGACGTTCTCGATTTCGATGCTCGGATTCTCGGCAAGAGAATCAACGTTCTTGCTTGGAATTTCATTCCAATGAAACGTGGCGGTGGGTTCTTAGAGATTGTCAGATGGGGGTTTCGAGATTCGATCACCGGAGTTCTTCGGTGTTCGAATATCATTTCAATTGATTTAGGCCCTTCTGGTGTTGTTGAAAGCAGTTGCAAGGCTCGTCATGGTGTTTTTGGCGCGGTGGAGTCGGTTAGTCCTTTGTCCATTGTTTCCTGTAGAACAGGTGATAGCAATTCGAAGAGCAATGCGGCTTTGGATTCAGGCCCTCCAACAAGCCTTCGCGGCTTCTTGGTCCAATTTATGGTCTGCGAGTGTAGATCGTGTAGCTCAAAGGAGTCACTTATGGTTTTGAGGGATTTAATTCAAGAAAAAGATGCTCATTCGTTTACCAAACCAGTGTTTGTGTATTGTTGTGGTTCTGCTTCATCGTGGCATCCTGTGTTTACAAAACTAGTGGGAAATATTGTTGCTTTATCAGGCTTGAAAAAGAAGTTGGTTTATATAGGAAAGGAAGAGTCTAAAGTAATGTGTGTCACTACAGGAAATTCTGCCTTACATTTGAGCAGATTGTCCAGGAAATGGACGCCGAAAGTTAAAGTAGTTAGAAAGGGGAATGGGGAAGTTGGTACATATAGAGGGATAGTTAGAGGAGTGTATATGCAAGGAATGCTTGTGGAATTGGACAATGAGGTGTGGCTTATGCTAACTGATCAACTGCTTACTCCACCACATAGTCTTAGGACGGGCGCTCTTGTTTCTGTGAGAAATGCCCATTTTGTGAATCCAAGATTCTCTTGGACAAGAAGAATGCTTATACTTGGTGCTTGCTTTAGGACCAATGTAATTGTGGAATCCTTCTCACCAATAGAAACTCGGTGTCATATAGCTTCACAATCACAGAGTTCGTTGCGGAAGTTCATCGAGTCCTTAGCATTTTCTTCCAGATTATGGGTATTGCTGGTTGCCTCGTATTTCCGGAAAAAGTTTGCTGGTATCTTATCTGAGAAGGAAATTTTGGGCTCAAAACATAAGGGAGGATTAGTTGAGATGTATGCTGTTTCACAAATGCCTTCGTCAAAGCATCAAACTCGGCCGGGAGTATTCATGGAATTTTGCAAGCATGATTCCTGTGGCTGTGGTTGTGAGCCATACATGGATAATCTGACTCTGGCAATCCCCTTGTCTCTTTTCATATGTCACTGTGAGCCCACTTGGATGAGGACACTAAACCTGGAAGGTAACAGTAGAAAATTGCATGATGACAAACAGTTCAGCGTATGTGAAGGGAGATCTTATGTTCAGTCAATTAGAAAGATCTTTTCAAGTGAAGATATAGGCATAACACTGATCGGAAGTTTGAAGACTTCTCCATCCGGAAGACTGCAGTTTGTTGATGCAACTGGTAGCATTGATGTTCTAGTACCAGACCTTCCATCAACTTGGGATGCCACCAAAATAATAAAGGTAGTTGACTACCGTGTAATTATAGAAGGCATGCCTGGGTTTGTGGATTCGGAAGGATTGCTTGAATATGATTTGTTCTCGACCCGAACTATCTTTGATTTTGTACCATTGGCAACAAAGGCAAATTTAACAGTTTGTGTTTACTTTCGCCTGAGAAGTCAGTTGTGCAGAAATCTTTGCTTTTATCCATGCACTGGATTGGGAGAAGATTTGAAGAAATTTGAAAGTGGAACATTTCACCTGTTATTGATTACCCACAAATTTCCTGCGCTACAGAAGTTTCAAGGTGATGCTTTAATAACAAGCTCATCAAGCTTGTTTGTTGAGGCTATAATCTTGCCATGGAATTTATCTGTTGCTGGAAACAATGCTATTTCATGTCAAACTGGGGCAGTTGGGGATGATCCAAAGAATTCCATGGAATTTTGTGCTGTTGGATGTTACTTGAAGAATGGTTCTTTCAAGAGACGGAAGGTTAGTGATTTATCAAGGAAGGAACTAACTTCGGGTTCAATGGACTGTTCCTGTGAGGCTATCGGAAGATTGAATCCTTGTTCCAAGTCTTACATTGAATCCAGTGAGGATAGAACATATAGCAACTTGAGTTCTCATGGAATATCTTGTTTGGCTATAATTAGTGGAGTTACTCGTTCAGTTATCTTGCACTGTACAAAAGCCAAATTAAATAGTGGTGGCTTTAGTGGTCCTAGTGGGGAGAAGATATTACTCGAGTTCAAGTCTGACAGCTTTTATAAGTATCAGATTGGTTGTTATTATATCACAAAGCATGATAGAGAAGATTCTTTTTGTAATCTAAAGGGCTCTGACTATTTCATTGGTAAAAAGATTCTCATCCCTTCCACAACTCACATGTGGAGCCTTTCATTTGGCACAGATGGGGTTTGTCAGAATAATAGTTCATCAAAGTGTATTCCATTGGATGATTCTTTTAGAAGTGACGAGCTACTATCTGGATACCATAAGGAAGCGCTTCTTCAGACGTCCAATAGAAATTTGTCTGAAACCTCTTCAGACATGTCTCTTTGTCTGTCTGCAAATGTATTAGGTCTTGGAGAGCTACACCTAAAGGAATTGAAAGAAAGCCTGATCAAGCCAGTTGTGACACCTAAAGACATTCCAAATATCTCTTCATGCATTAGTCCTGTTATTCCTGTGCCTCCACTATCCACTGCATCTAACATGTTTCCTGAGGGAAATCTAATATCTGTGTGTGGACATGTGGTTGCGGTTCATAGCATTGAGGACAATTCTGTTGATCCATATTTAAACCGTCAAAACCTTCGTGATCCTCTTGAGCTGAGATTCTCACCAAGGGCAACAAGCAGTTGCATTCACGTGGTGGTGGATCATCAGATTATAAAGCTATCTGGGACTTTGCGCGCAAATGAACTCCCGGTCGGATTTGGACCTGGTGTGGATGCGACGTTTTATCGGATTCTTGCATTGCGGGAGCAGAAAAGATGGATCTTGACATCTGTATCATTTATTACAATCCATTCCGTCAGCAGAGTCAATGATTCATGTGCTGTCAATTGCTCTAATCCTGCTTCAGACATGTCCAATGCTTCCCCCCAAGAGATCATATGCTCAGGGTTAATATCTGAATTGGTTCAGTGTTTGGACTTCAAGCCAATGCTGTTGCACTGCAGGGTTGTTGCTCTACATTTCCTGGTTCTAGAGAAGAAAAGTAGAAATGTCAATTATCAACTAAAGAATCACCTGAGGCAGCATCTTGTTGACATCCCGCTTGCTGGCTTTGTGCTAGATGATGGTTCTTCTCCATGCTGTTGTTGGGCTAATGATGAAAGAGCAGCAACCTTGCTGAGGCTGTATGAAGAATTCCCACAGTCAGCTTCTGAAAATAGTGACTGGACCTTAAAGTGGACCAGAAAGAACAATAATGCATGGTGTTCCACAATCTATCATCTTGAGAGAATTTTAAATAATCATCATCGGATTGTTGTGAGGAACTACGGATCAATGTTTGATTCGTCTTATCAAGATCTTGCTGTGTCTGTGAGTTCAGATAATGCCCTCAATAGCTATGATGAAAACCTTTTGAAGTCTATAGTCTTCAATGCTTGCTTCAGCAAATTTTGGACTATTGGTGCTAGTACGATGGATTTGGATGCTGTGAGGCGTTTGAAGACGGAGAACCTTATGGAAACGGAGATGTCGTTGCATTCCATGCAACATATATGGGCCACCGAAGTTGAACACACTAACCATCTCAGTCAGGCAAGGAACGGTATTCAAGAACTGATAGACGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CTC1_2

Protein Analysis

1378

Amino Acids

152.1

Weight (kDa)

8.27

Isoelectric Point (pI)

42.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CTC1_2 PF15491 61 - 375 8.5e-97 CST, telomere maintenance, complex subunit CTC1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2592, 3218
AatII GACGTC 1 cut(s) 2843
Acc65I GGTACC 1 cut(s) 77
AccB1I GGYRCC 1 cut(s) 77
AccB7I CCANNNNNTGG 4 cut(s) 676, 954, 1323, 2033
AccBSI CCGCTC 2 cut(s) 242, 266
AccII CGCG 4 cut(s) 45, 554, 657, 3240
AccIII TCCGGA 2 cut(s) 1350, 1748
AclI AACGTT 1 cut(s) 375
AclWI GGATC 6 cut(s) 2237, 3110, 3140, 3213, 3332, 3844
AcoI YGGCCR 2 cut(s) 46, 1466
AcuI CTGAAG 4 cut(s) 2819, 2853, 3393, 3931
AcvI CACGTG 1 cut(s) 3196
AcyI GRCGYC 3 cut(s) 249, 959, 2840
AdeI CACNNNGTG 1 cut(s) 3199
AfaI GTAC 6 cut(s) 79, 1003, 1797, 1944, 2509, 3976
AfeI AGCGCT 1 cut(s) 2829
AfiI CCNNNNNNNGG 7 cut(s) 676, 954, 1323, 2033, 3611, 3684, 3741
AflIII ACRYGT 5 cut(s) 2709, 2874, 3039, 3076, 3414
AhlI ACTAGT 1 cut(s) 826
AjnI CCWGG 5 cut(s) 947, 1605, 1873, 3268, 3528
AjuI GAANNNNNNNTTGG 6 cut(s) 851, 883, 1373, 1405, 2971, 3003
Alw26I GTCTC 3 cut(s) 1563, 2299, 2883
AlwI GGATC 6 cut(s) 2237, 3110, 3140, 3213, 3332, 3844
AlwNI CAGNNNCTG 1 cut(s) 3716
Ama87I CYCGRG 1 cut(s) 2567
Aor13HI TCCGGA 2 cut(s) 1350, 1748
Aor51HI AGCGCT 1 cut(s) 2829
AoxI GGCC 5 cut(s) 46, 499, 637, 1466, 4062
ApeKI GCWGC 3 cut(s) 327, 3586, 3671
Asp700I GAANNNNTTC 2 cut(s) 2829, 3468
Asp718I GGTACC 1 cut(s) 77
AspLEI GCGC 6 cut(s) 554, 1124, 2110, 2830, 3240, 3242
AsuC2I CCSGG 2 cut(s) 1470, 3254
AsuHPI GGTGA 8 cut(s) 49, 448, 611, 1227, 2069, 2138, 3159, 3569
AsuII TTCGAA 2 cut(s) 476, 611
AvaI CYCGRG 1 cut(s) 2567
AvaII GGWCC 8 cut(s) 16, 169, 667, 1209, 2543, 3266, 3732, 3744
AxyI CCTNAGG 2 cut(s) 3048, 3581
BaeI ACNNNNGTAYC 2 cut(s) 3321, 3354
BanI GGYRCC 1 cut(s) 77
BanII GRGCYC 3 cut(s) 1397, 1584, 2663
BarI GAAGNNNNNNTAC 2 cut(s) 1788, 1820
BbrPI CACGTG 1 cut(s) 3196
BbsI GAAGAC 4 cut(s) 1742, 1759, 3925, 4013
BbvCI CCTCAGC 1 cut(s) 3683
BbvI GCAGC 3 cut(s) 314, 3598, 3683
BccI CCATC 8 cut(s) 429, 1753, 1816, 2729, 3315, 3623, 3973, 4095
BceAI ACGGC 1 cut(s) 33
BcgI CGANNNNNNTGC 4 cut(s) 329, 363, 1445, 1479
BciT130I CCWGG 5 cut(s) 949, 1607, 1875, 3270, 3530
BciVI GTATCC 1 cut(s) 2807
BclI TGATCA 2 cut(s) 1084, 2946
BcnI CCSGG 2 cut(s) 1470, 3254
BcoDI GTCTC 3 cut(s) 1563, 2299, 2883
BcuI ACTAGT 1 cut(s) 826
BfaI CTAG 6 cut(s) 827, 1793, 2547, 3536, 3623, 3972
BfmI CTRYAG 6 cut(s) 589, 912, 1757, 2111, 3505, 3927
BfoI RGCGCY 2 cut(s) 1125, 2831
BfuI GTATCC 1 cut(s) 2807
BglI GCCNNNNNGGC 1 cut(s) 657
BglII AGATCT 3 cut(s) 1664, 1689, 3862
Bme1390I CCNGG 7 cut(s) 949, 1470, 1607, 1875, 3254, 3270, 3530
Bme18I GGWCC 8 cut(s) 16, 169, 667, 1209, 2543, 3266, 3732, 3744
BmeT110I CYCGRG 1 cut(s) 2567
BmiI GGNNCC 4 cut(s) 64, 79, 208, 2717
BmrFI CCNGG 7 cut(s) 949, 1470, 1607, 1875, 3254, 3270, 3530
BmrI ACTGGG 1 cut(s) 2235
BmuI ACTGGG 1 cut(s) 2235
BpiI GAAGAC 4 cut(s) 1742, 1759, 3925, 4013
BpmI CTGGAG 1 cut(s) 228
Bpu10I CCTNAGC 3 cut(s) 1303, 3448, 3683
Bpu14I TTCGAA 2 cut(s) 476, 611
BpuEI CTTGAG 3 cut(s) 2461, 3173, 3809
BpuMI CCSGG 2 cut(s) 1470, 3254
BsaAI YACGTR 1 cut(s) 3196
BsaBI GATNNNNATC 1 cut(s) 2690
BsaHI GRCGYC 3 cut(s) 249, 959, 2840
BsaJI CCNNGG 5 cut(s) 165, 1874, 2180, 2256, 3170
BsaWI WCCGGW 4 cut(s) 59, 458, 1350, 1748
BsaXI ACNNNNNCTCC 4 cut(s) 1401, 1431, 4022, 4052
Bsc4I CCNNNNNNNGG 7 cut(s) 676, 954, 1323, 2033, 3611, 3684, 3741
Bse1I ACTGG 7 cut(s) 770, 1780, 2038, 2230, 2415, 2954, 3734
Bse21I CCTNAGG 2 cut(s) 3048, 3581
Bse3DI GCAATG 2 cut(s) 625, 3302
Bse8I GATNNNNATC 1 cut(s) 2690
BseAI TCCGGA 2 cut(s) 1350, 1748
BseBI CCWGG 5 cut(s) 949, 1607, 1875, 3270, 3530
BseDI CCNNGG 5 cut(s) 165, 1874, 2180, 2256, 3170
BseJI GATNNNNATC 1 cut(s) 2690
BseLI CCNNNNNNNGG 7 cut(s) 676, 954, 1323, 2033, 3611, 3684, 3741
BseMI GCAATG 2 cut(s) 625, 3302
BseMII CTCAG 8 cut(s) 1368, 1982, 3039, 3149, 3462, 3572, 3674, 4105
BseNI ACTGG 7 cut(s) 770, 1780, 2038, 2230, 2415, 2954, 3734
BsePI GCGCGC 1 cut(s) 3238
BseRI GAGGAG 4 cut(s) 58, 188, 258, 1038
BseX3I CGGCCG 2 cut(s) 46, 1466
BseXI GCAGC 3 cut(s) 314, 3598, 3683
BsgI GTGCAG 1 cut(s) 2026
Bsh1236I CGCG 4 cut(s) 45, 554, 657, 3240
Bsh1285I CGRYCG 3 cut(s) 49, 1469, 3258
BshFI GGCC 5 cut(s) 48, 501, 639, 1468, 4064
BshNI GGYRCC 1 cut(s) 77
BsiEI CGRYCG 3 cut(s) 49, 1469, 3258
BsiHKCI CYCGRG 1 cut(s) 2567
BsiSI CCGG 6 cut(s) 60, 459, 1351, 1469, 1749, 3254
BslFI GGGAC 1 cut(s) 3244
BslI CCNNNNNNNGG 7 cut(s) 676, 954, 1323, 2033, 3611, 3684, 3741
BsmAI GTCTC 3 cut(s) 1563, 2299, 2883
BsmBI CGTCTC 1 cut(s) 2299
BsmFI GGGAC 1 cut(s) 3244
BsmI GAATGC 4 cut(s) 1047, 1188, 3189, 4042
BsnI GGCC 5 cut(s) 48, 501, 639, 1468, 4064
BsoBI CYCGRG 1 cut(s) 2567
Bsp119I TTCGAA 2 cut(s) 476, 611
Bsp1286I GDGCHC 3 cut(s) 1397, 1584, 2663
Bsp13I TCCGGA 2 cut(s) 1350, 1748
Bsp1407I TGTACA 1 cut(s) 2507
Bsp19I CCATGG 2 cut(s) 2180, 2256
BspANI GGCC 5 cut(s) 48, 501, 639, 1468, 4064
BspCNI CTCAG 8 cut(s) 1369, 1983, 3040, 3150, 3461, 3573, 3675, 4104
BspEI TCCGGA 2 cut(s) 1350, 1748
BspFNI CGCG 4 cut(s) 45, 554, 657, 3240
BspLI GGNNCC 4 cut(s) 64, 79, 208, 2717
BspMAI CTGCAG 2 cut(s) 1761, 3509
BspPI GGATC 6 cut(s) 2237, 3110, 3140, 3213, 3332, 3844
BspQI GCTCTTC 1 cut(s) 608
BspT104I TTCGAA 2 cut(s) 476, 611
BspT107I GGYRCC 1 cut(s) 77
BsrBI CCGCTC 2 cut(s) 242, 266
BsrDI GCAATG 2 cut(s) 625, 3302
BsrGI TGTACA 1 cut(s) 2507
BsrI ACTGG 7 cut(s) 770, 1780, 2038, 2230, 2415, 2954, 3734
BssECI CCNNGG 5 cut(s) 165, 1874, 2180, 2256, 3170
BssHII GCGCGC 1 cut(s) 3238
BssNI GRCGYC 3 cut(s) 249, 959, 2840
BssT1I CCWWGG 4 cut(s) 165, 2180, 2256, 3170
Bst2UI CCWGG 5 cut(s) 949, 1607, 1875, 3270, 3530
Bst6I CTCTTC 4 cut(s) 608, 882, 2872, 2992
BstACI GRCGYC 3 cut(s) 249, 959, 2840
BstAPI GCANNNNNTGC 2 cut(s) 1042, 4048
BstAUI TGTACA 1 cut(s) 2507
BstBAI YACGTR 1 cut(s) 3196
BstBI TTCGAA 2 cut(s) 476, 611
BstC8I GCNNGC 7 cut(s) 1201, 1493, 1871, 3240, 3609, 3613, 3943
BstDSI CCRYGG 2 cut(s) 2180, 2256
BstENI CCTNNNNNAGG 1 cut(s) 3682
BstFNI CGCG 4 cut(s) 45, 554, 657, 3240
BstH2I RGCGCY 2 cut(s) 1125, 2831
BstHHI GCGC 6 cut(s) 554, 1124, 2110, 2830, 3240, 3242
BstMAI GTCTC 3 cut(s) 1563, 2299, 2883
BstMCI CGRYCG 3 cut(s) 49, 1469, 3258
BstNI CCWGG 5 cut(s) 949, 1607, 1875, 3270, 3530
BstNSI RCATGY 6 cut(s) 1873, 2713, 2878, 3043, 3080, 3418
BstSCI CCNGG 7 cut(s) 947, 1468, 1605, 1873, 3252, 3268, 3528
BstSFI CTRYAG 6 cut(s) 589, 912, 1757, 2111, 3505, 3927
BstUI CGCG 4 cut(s) 45, 554, 657, 3240
BstV1I GCAGC 3 cut(s) 314, 3598, 3683
BstV2I GAAGAC 4 cut(s) 1742, 1759, 3925, 4013
BstX2I RGATCY 4 cut(s) 1664, 1689, 3324, 3862
BstXI CCANNNNNNTGG 1 cut(s) 1815
BstYI RGATCY 4 cut(s) 1664, 1689, 3324, 3862
BstZI CGGCCG 2 cut(s) 46, 1466
Bsu36I CCTNAGG 2 cut(s) 3048, 3581
BsuI GTATCC 1 cut(s) 2807
BsuRI GGCC 5 cut(s) 48, 501, 639, 1468, 4064
BtgI CCRYGG 2 cut(s) 2180, 2256
BtsI GCAGTG 2 cut(s) 3027, 3502
BtsIMutI CAGTG 9 cut(s) 777, 1573, 1718, 2031, 2422, 2503, 3027, 3479, 3502
Cac8I GCNNGC 7 cut(s) 1201, 1493, 1871, 3240, 3609, 3613, 3943
CaiI CAGNNNCTG 1 cut(s) 3716
CfoI GCGC 6 cut(s) 554, 1124, 2110, 2830, 3240, 3242
CseI GACGC 2 cut(s) 257, 967
CsiI ACCWGGT 1 cut(s) 3268
Csp6I GTAC 6 cut(s) 78, 1002, 1796, 1943, 2508, 3975
CspCI CAANNNNNGTGG 4 cut(s) 810, 845, 4054, 4089
CviQI GTAC 6 cut(s) 78, 1002, 1796, 1943, 2508, 3975
DraI TTTAAA 2 cut(s) 3126, 3801
DraIII CACNNNGTG 1 cut(s) 3199
EaeI YGGCCR 2 cut(s) 46, 1466
EagI CGGCCG 2 cut(s) 46, 1466
Eam1104I CTCTTC 4 cut(s) 608, 882, 2872, 2992
EarI CTCTTC 4 cut(s) 608, 882, 2872, 2992
EciI GGCGGA 1 cut(s) 301
EclXI CGGCCG 2 cut(s) 46, 1466
Eco130I CCWWGG 4 cut(s) 165, 2180, 2256, 3170
Eco24I GRGCYC 3 cut(s) 1397, 1584, 2663
Eco47I GGWCC 8 cut(s) 16, 169, 667, 1209, 2543, 3266, 3732, 3744
Eco47III AGCGCT 1 cut(s) 2829
Eco52I CGGCCG 2 cut(s) 46, 1466
Eco57I CTGAAG 4 cut(s) 2819, 2853, 3393, 3931
Eco72I CACGTG 1 cut(s) 3196
Eco81I CCTNAGG 2 cut(s) 3048, 3581
Eco88I CYCGRG 1 cut(s) 2567
EcoNI CCTNNNNNAGG 1 cut(s) 3682
EcoO109I RGGNCCY 4 cut(s) 16, 169, 500, 638
EcoRI GAATTC 2 cut(s) 2251, 3698
EcoRII CCWGG 5 cut(s) 947, 1605, 1873, 3268, 3528
EcoT14I CCWWGG 4 cut(s) 165, 2180, 2256, 3170
EcoT22I ATGCAT 2 cut(s) 2996, 3766
EcoT38I GRGCYC 3 cut(s) 1397, 1584, 2663
ErhI CCWWGG 4 cut(s) 165, 2180, 2256, 3170
Esp3I CGTCTC 1 cut(s) 2299
FalI AAGNNNNNCTT 8 cut(s) 1029, 1061, 1153, 1185, 1884, 1916, 2817, 2849
FaqI GGGAC 1 cut(s) 3244
FauI CCCGC 2 cut(s) 3300, 3612
FauNDI CATATG 2 cut(s) 1568, 3443
FbaI TGATCA 2 cut(s) 1084, 2946
FriOI GRGCYC 3 cut(s) 1397, 1584, 2663
FspBI CTAG 6 cut(s) 827, 1793, 2547, 3536, 3623, 3972
GlaI GCGC 6 cut(s) 553, 1123, 2109, 2829, 3239, 3241
GsuI CTGGAG 1 cut(s) 228
HaeII RGCGCY 2 cut(s) 1125, 2831
HaeIII GGCC 5 cut(s) 48, 501, 639, 1468, 4064
HapII CCGG 6 cut(s) 60, 459, 1351, 1469, 1749, 3254
HgaI GACGC 2 cut(s) 257, 967
HhaI GCGC 6 cut(s) 554, 1124, 2110, 2830, 3240, 3242
Hin1I GRCGYC 3 cut(s) 249, 959, 2840
Hin6I GCGC 6 cut(s) 552, 1122, 2108, 2828, 3238, 3240
HinP1I GCGC 6 cut(s) 552, 1122, 2108, 2828, 3238, 3240
HincII GTYRAC 2 cut(s) 1846, 3598
HindII GTYRAC 2 cut(s) 1846, 3598
HindIII AAGCTT 1 cut(s) 2152
HpaII CCGG 6 cut(s) 60, 459, 1351, 1469, 1749, 3254
HphI GGTGA 8 cut(s) 49, 448, 611, 1227, 2069, 2138, 3159, 3569
Hpy166II GTNNAC 7 cut(s) 762, 819, 1846, 1981, 3074, 3598, 3744
Hpy8I GTNNAC 7 cut(s) 762, 819, 1846, 1981, 3074, 3598, 3744
Hpy99I CGWCG 3 cut(s) 308, 335, 3286
HpyCH4IV ACGT 6 cut(s) 333, 375, 406, 2840, 3195, 3284
HpySE526I ACGT 6 cut(s) 333, 375, 406, 2840, 3195, 3284
Hsp92I GRCGYC 3 cut(s) 249, 959, 2840
HspAI GCGC 6 cut(s) 552, 1122, 2108, 2828, 3238, 3240
Kpn2I TCCGGA 2 cut(s) 1350, 1748
KpnI GGTACC 1 cut(s) 81
Ksp22I TGATCA 2 cut(s) 1084, 2946
LguI GCTCTTC 1 cut(s) 608
LmnI GCTCC 7 cut(s) 62, 97, 247, 271, 281, 2715, 3310
Lsp1109I GCAGC 3 cut(s) 314, 3598, 3683
MabI ACCWGGT 1 cut(s) 3268
MaeI CTAG 6 cut(s) 827, 1793, 2547, 3536, 3623, 3972
MaeII ACGT 6 cut(s) 333, 375, 406, 2840, 3195, 3284
MbiI CCGCTC 2 cut(s) 242, 266
MfeI CAATTG 3 cut(s) 87, 489, 3391
MflI RGATCY 4 cut(s) 1664, 1689, 3324, 3862
MhlI GDGCHC 3 cut(s) 1397, 1584, 2663
MlyI GAGTC 6 cut(s) 569, 719, 899, 1307, 1534, 3378
MmeI TCCRAC 5 cut(s) 64, 327, 668, 2254, 3238
Mph1103I ATGCAT 2 cut(s) 2996, 3766
MroI TCCGGA 2 cut(s) 1350, 1748
MroXI GAANNNNTTC 2 cut(s) 2829, 3468
MseI TTAA 9 cut(s) 734, 969, 1967, 2135, 2522, 3125, 3455, 3737, 3800
MslI CAYNNNNRTG 4 cut(s) 398, 1589, 2764, 3194
MspI CCGG 6 cut(s) 60, 459, 1351, 1469, 1749, 3254
MspR9I CCNGG 7 cut(s) 949, 1470, 1607, 1875, 3254, 3270, 3530
MunI CAATTG 3 cut(s) 87, 489, 3391
Mva1269I GAATGC 4 cut(s) 1047, 1188, 3189, 4042
MvaI CCWGG 5 cut(s) 949, 1607, 1875, 3270, 3530
MvnI CGCG 4 cut(s) 45, 554, 657, 3240
NciI CCSGG 2 cut(s) 1470, 3254
NcoI CCATGG 2 cut(s) 2180, 2256
NdeI CATATG 2 cut(s) 1568, 3443
NlaIV GGNNCC 4 cut(s) 64, 79, 208, 2717
NmeAIII GCCGAG 2 cut(s) 339, 1444
NmuCI GTSAC 6 cut(s) 711, 907, 1571, 2795, 2959, 3725
NsiI ATGCAT 2 cut(s) 2996, 3766
NspI RCATGY 6 cut(s) 1873, 2713, 2878, 3043, 3080, 3418
NspV TTCGAA 2 cut(s) 476, 611
PaeI GCATGC 1 cut(s) 1873
PaeR7I CTCGAG 1 cut(s) 2567
PauI GCGCGC 1 cut(s) 3238
PciI ACATGT 5 cut(s) 2709, 2874, 3039, 3076, 3414
PciSI GCTCTTC 1 cut(s) 608
PcsI WCGNNNNNNNCGW 1 cut(s) 4034
PctI GAATGC 4 cut(s) 1047, 1188, 3189, 4042
PdmI GAANNNNTTC 2 cut(s) 2829, 3468
PflMI CCANNNNNTGG 4 cut(s) 676, 954, 1323, 2033
PfoI TCCNGGA 1 cut(s) 947
PleI GAGTC 6 cut(s) 568, 718, 898, 1306, 1534, 3377
PmaCI CACGTG 1 cut(s) 3196
PmlI CACGTG 1 cut(s) 3196
PpsI GAGTC 6 cut(s) 568, 718, 898, 1306, 1534, 3377
Ppu21I YACGTR 1 cut(s) 3196
PpuMI RGGWCCY 2 cut(s) 16, 169
PscI ACATGT 5 cut(s) 2709, 2874, 3039, 3076, 3414
PsiI TTATAA 2 cut(s) 2592, 3218
Psp1406I AACGTT 1 cut(s) 375
Psp5II RGGWCCY 2 cut(s) 16, 169
Psp6I CCWGG 5 cut(s) 947, 1605, 1873, 3268, 3528
PspCI CACGTG 1 cut(s) 3196
PspGI CCWGG 5 cut(s) 947, 1605, 1873, 3268, 3528
PspN4I GGNNCC 4 cut(s) 64, 79, 208, 2717
PspPPI RGGWCCY 2 cut(s) 16, 169
PspXI VCTCGAGB 1 cut(s) 2567
PstI CTGCAG 2 cut(s) 1761, 3509
PstNI CAGNNNCTG 1 cut(s) 3716
PsuI RGATCY 4 cut(s) 1664, 1689, 3324, 3862
PteI GCGCGC 1 cut(s) 3238
RsaI GTAC 6 cut(s) 79, 1003, 1797, 1944, 2509, 3976
RsaNI GTAC 6 cut(s) 78, 1002, 1796, 1943, 2508, 3975
RseI CAYNNNNRTG 4 cut(s) 398, 1589, 2764, 3194
SapI GCTCTTC 1 cut(s) 608
SaqAI TTAA 9 cut(s) 734, 969, 1967, 2135, 2522, 3125, 3455, 3737, 3800
SchI GAGTC 6 cut(s) 569, 719, 899, 1307, 1534, 3378
ScrFI CCNGG 7 cut(s) 949, 1470, 1607, 1875, 3254, 3270, 3530
SduI GDGCHC 3 cut(s) 1397, 1584, 2663
SexAI ACCWGGT 1 cut(s) 3268
SfcI CTRYAG 6 cut(s) 589, 912, 1757, 2111, 3505, 3927
Sfr274I CTCGAG 1 cut(s) 2567
SfuI TTCGAA 2 cut(s) 476, 611
SinI GGWCC 8 cut(s) 16, 169, 667, 1209, 2543, 3266, 3732, 3744
SlaI CTCGAG 1 cut(s) 2567
SmiMI CAYNNNNRTG 4 cut(s) 398, 1589, 2764, 3194
SmlI CTYRAG 4 cut(s) 2440, 2567, 3152, 3788
SmoI CTYRAG 4 cut(s) 2440, 2567, 3152, 3788
SpeI ACTAGT 1 cut(s) 826
SphI GCATGC 1 cut(s) 1873
SspI AATATT 1 cut(s) 838
SspMI CTAG 6 cut(s) 827, 1793, 2547, 3536, 3623, 3972
StyD4I CCNGG 7 cut(s) 947, 1468, 1605, 1873, 3252, 3268, 3528
StyI CCWWGG 4 cut(s) 165, 2180, 2256, 3170
TaiI ACGT 6 cut(s) 336, 378, 409, 2843, 3198, 3287
TatI WGTACW 1 cut(s) 2507
TauI GCSGC 9 cut(s) 48, 254, 257, 260, 263, 266, 317, 626, 660
Tru1I TTAA 9 cut(s) 734, 969, 1967, 2135, 2522, 3125, 3455, 3737, 3800
Tru9I TTAA 9 cut(s) 734, 969, 1967, 2135, 2522, 3125, 3455, 3737, 3800
TscAI CASTG 9 cut(s) 777, 1580, 1725, 2038, 2422, 2510, 3034, 3479, 3509
TseFI GTSAC 6 cut(s) 711, 907, 1571, 2795, 2959, 3725
TseI GCWGC 3 cut(s) 327, 3586, 3671
Tsp45I GTSAC 6 cut(s) 711, 907, 1571, 2795, 2959, 3725
TspGWI ACGGA 5 cut(s) 2323, 3349, 3849, 4025, 4043
TspRI CASTG 9 cut(s) 777, 1580, 1725, 2038, 2422, 2510, 3034, 3479, 3509
Van91I CCANNNNNTGG 4 cut(s) 676, 954, 1323, 2033
VpaK11BI GGWCC 8 cut(s) 16, 169, 667, 1209, 2543, 3266, 3732, 3744
XagI CCTNNNNNAGG 1 cut(s) 3682
XbaI TCTAGA 1 cut(s) 3535
XceI RCATGY 6 cut(s) 1873, 2713, 2878, 3043, 3080, 3418
XcmI CCANNNNNNNNNTGG 3 cut(s) 1167, 1219, 3648
XhoI CTCGAG 1 cut(s) 2567
XmnI GAANNNNTTC 2 cut(s) 2829, 3468
XspI CTAG 6 cut(s) 827, 1793, 2547, 3536, 3623, 3972
ZraI GACGTC 1 cut(s) 2841
Zsp2I ATGCAT 2 cut(s) 2996, 3766
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.