Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0006351

Physical Location & Seq

Genomic Coordinates Reverse (-)

20975958 .. 20981599

Gene Structure 5642 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00234540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1887 bp

ATGGAAAATGTGAGAGTCTTCACAATCGCAGAGTTACTCCAACGCGGCCGTTGCCTCACCGGAACCTCCTCTTTCGGTACCCCTTCCTTTGCTCCAAAATCAAAGCCCTCCATTTCTCCCATCCCCTTCCTTAAAGGATTGCTTGAATATGATTTGTTCTCAACTCGAACTATCTTTGATTTTGTACCATTGGCAAGAAAGGTGAACTTAACAGTTTGTGTTTACTTTCGCTTGAGAAGTCCGTTGTGCAGAAATCTTTGCTTTTATCCTTGTACTGTATTGGGAGAAGATTTGAAGAGATTTGAAAGTGGAACATTTCACCTGCTATGGATTACCCACAAATTTCCTGTGCTATACAAGTTTCAAGGTGATGTGTTAACAAGCTCATTAAGCATGTTTGTTGAGGCTATAATCTTGCCATGGAATTTATCAGTTGCTGAAAACAATGGTATTGCATGTCAAACTGGGGTAGTTGGGGATGATCCAAAAAATTCCATGGAATTCTGTGCTGTTGGATGTTACTTGAAGAATGATTCTTTCAAGAGACGGAAGGTTTGTGATTCATCAAGGAAGGAACTAAGTTCTGGTTCAATGGACTGTTCCTATGAGGCCGTCGGAAAACTGAATTCTTGTTCTGAGTCTTACATTGAATCCAGTGAGGATAAAACATATAGCGACTTGAGTTGTCATGAAATATCTGGTTTGGCTATAATCAGCGAAGTTACTCGTTCAGTTATGTTGTACTGTACAAAAGCCAAATTAAATAGTGGTGGCTTTTGCGGTCTAAGTGGACAGAAGATATTGCTCGAGTTTAAGTCTGACAGCTTTTATAAGTATCAGAATAACAGTTCATCAAAGTGTATTCCATTGGATGATTCTCTTATAAGTAACGAGCTTCTATCTGGATATCATAACGAAGTACTTCTTCAGACATCCAATGAAAATTTGTCTGGAACCTCTTCAGACATGTGTCTTTGTCTCGTTGAGGACAACTCTGTTGATCCATATTTGAACCGTCAAAACCTTCGTGATCCTCTTGAGCTGAGATTCTTGCAGAGGACAACAAGCAGTTGCATTCACGTGTTGGTGGATAATCAGATTGTAAAGCTATCTGGTTCTTTGCGCAATCATGATTTTCCAGTCGGATTTGGACCTGGTGTGGATGCAACGTTTTATAGGATTCTTGCATTGTGGGAGCAGAATAGATGGATCTTGACATCGGTATCATTTATTACAATCCATTCCATAAGGTTGATATCTGAATTGGATCAAAGTTTGGACTTCAAGCCAATGCTGTTGCATTGCAGGGTTGTTGCTATCCATTTCCTGGTTCTAGAGAAGAAAAGTGGAAATGTCAATTATCAACTAAAAAATCACTTGAGACAGCATCTTGTTGACGTCCCACTTGCTGGCTTTGTTCTAGATGACGGTTCTTCTCCATGCTGTTGTTGGGCTAATGCTGAAAGAGCAGCAACCTTGCTGAGGCTGCATGAAGAATTCCCAGAGTTAGCTTTTGAAAATAGTGGCTGGACCTTAAAGTGGGTCAGAACGGACAATAATTCATGGAGTTCCACTATCTATCATCTCGAGAGAATTTTAAATAATCATCATCGGATTGTAGTGAGGAACTATGGATCAATGTTTGATTCGTCTTATCAAGATCTCGCTGTGTCTGTGAGTTCAGATAATGCCCTCAGCAGCTATGATGAAAACCTTCTAAAGTTTATTGTCTTCAATGCTTGCTTCAGCAAATTTTGGACCATTGGTGCTAGTATGATGGATTTGGATGCTGTCAGGCGATTGAAGAGAGAGAACCTTGTGGAAATGGAGATGTTTATGCATATATTCCATGCAACATATATGGGCCGCAGAAGTTCAACACATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CTC1_2

Protein Analysis

628

Amino Acids

71.18

Weight (kDa)

6.53

Isoelectric Point (pI)

46.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006351)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G09680 AT4G09680 AT4G09680 AT4G09680
fragaria_vesca	FvH4_5g30300 FvH4_5g30300 FvH4_5g30300
malus_domestica	MD08G1060500.v1.1
prunus_persica	Prupe.1G390200_v2.0.a1 Prupe.1G390200_v2.0.a1
pyrus_communis	pycom08g05030
rosa_chinensis	RchiOBHm_Chr7g0224651
rosa_laevigata	RLG00000001867
rosa_multiflora	Rmu_co8365027.1_g000001 Rmu_sc0000144.1_g000039 Rmu_sc0000144.1_g000045 Rmu_sc0038806.1_g000001
rosa_roxburghii	Rroxscaffold_3G00234500 Rroxscaffold_3G00234540
rosa_rugosa	Rorug07G0224600 Rorug07G0224700 Rorug07G0224800
rosa_samantha	Rh7AG378200 Rh7BG360800 Rh7CG397500 Rh7DG370900
rosa_wichuraiana	Rw7G031300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	831, 884
AarI	CACCTGC	1 cut(s)	330
AatII	GACGTC	1 cut(s)	1401
Acc16I	TGCGCA	1 cut(s)	1124
Acc36I	ACCTGC	1 cut(s)	330
Acc65I	GGTACC	1 cut(s)	77
AccB1I	GGYRCC	1 cut(s)	77
AccB7I	CCANNNNNTGG	2 cut(s)	1327, 1409
AccII	CGCG	1 cut(s)	45
AciI	CCGC	3 cut(s)	45, 780, 1867
AclI	AACGTT	1 cut(s)	1169
AclWI	GGATC	6 cut(s)	476, 995, 1025, 1217, 1275, 1642
AcoI	YGGCCR	1 cut(s)	46
AcsI	RAATTY	9 cut(s)	341, 424, 490, 500, 625, 943, 1496, 1593, 1751
AcuI	CTGAAG	3 cut(s)	911, 945, 1729
AcvI	CACGTG	1 cut(s)	1081
AcyI	GRCGYC	1 cut(s)	1398
AfaI	GTAC	6 cut(s)	79, 186, 274, 743, 748, 921
AfiI	CCNNNNNNNGG	4 cut(s)	1327, 1409, 1482, 1539
AflIII	ACRYGT	2 cut(s)	966, 1080
AjnI	CCWGG	2 cut(s)	1153, 1326
AluBI	AGCT	7 cut(s)	384, 825, 895, 1042, 1108, 1511, 1701
AluI	AGCT	7 cut(s)	384, 825, 895, 1042, 1108, 1511, 1701
Alw26I	GTCTC	3 cut(s)	538, 983, 1375
AlwI	GGATC	6 cut(s)	476, 995, 1025, 1217, 1275, 1642
AlwNI	CAGNNNCTG	1 cut(s)	437
Ama87I	CYCGRG	2 cut(s)	806, 1586
AoxI	GGCC	3 cut(s)	46, 609, 1864
ApeKI	GCWGC	3 cut(s)	1469, 1486, 1698
ApoI	RAATTY	9 cut(s)	341, 424, 490, 500, 625, 943, 1496, 1593, 1751
ArsI	GACNNNNNNTTYG	2 cut(s)	537, 569
Asp700I	GAANNNNTTC	3 cut(s)	921, 958, 1713
Asp718I	GGTACC	1 cut(s)	77
AspLEI	GCGC	1 cut(s)	1125
AspS9I	GGNCC	4 cut(s)	1151, 1530, 1758, 1864
AsuHPI	GGTGA	4 cut(s)	49, 214, 311, 380
AvaI	CYCGRG	2 cut(s)	806, 1586
AvaII	GGWCC	3 cut(s)	1151, 1530, 1758
BaeI	ACNNNNGTAYC	2 cut(s)	1206, 1239
BanI	GGYRCC	1 cut(s)	77
BbrPI	CACGTG	1 cut(s)	1081
BbsI	GAAGAC	2 cut(s)	10, 1723
BbvCI	CCTCAGC	2 cut(s)	1481, 1694
BbvI	GCAGC	3 cut(s)	1473, 1481, 1710
BccI	CCATC	3 cut(s)	128, 1200, 1771
BceAI	ACGGC	2 cut(s)	33, 596
BciT130I	CCWGG	2 cut(s)	1155, 1328
BcoDI	GTCTC	3 cut(s)	538, 983, 1375
BfaI	CTAG	3 cut(s)	1334, 1421, 1770
BfuAI	ACCTGC	1 cut(s)	330
BglII	AGATCT	1 cut(s)	1660
BisI	GCNGC	5 cut(s)	46, 1470, 1487, 1699, 1867
BlsI	GCNGC	5 cut(s)	47, 1471, 1488, 1700, 1868
BmcAI	AGTACT	1 cut(s)	921
Bme1390I	CCNGG	2 cut(s)	1155, 1328
Bme18I	GGWCC	3 cut(s)	1151, 1530, 1758
BmeT110I	CYCGRG	2 cut(s)	806, 1586
BmgT120I	GGNCC	4 cut(s)	1151, 1530, 1758, 1864
BmiI	GGNNCC	3 cut(s)	64, 79, 955
BmrFI	CCNGG	2 cut(s)	1155, 1328
BmrI	ACTGGG	1 cut(s)	474
BmsI	GCATC	3 cut(s)	1153, 1396, 1777
BmuI	ACTGGG	1 cut(s)	474
BoxI	GACNNNNGTC	1 cut(s)	969
BpiI	GAAGAC	2 cut(s)	10, 1723
BplI	GAGNNNNNCTC	2 cut(s)	977, 1009
Bpu10I	CCTNAGC	2 cut(s)	1481, 1694
BpuEI	CTTGAG	4 cut(s)	253, 700, 1058, 1399
BsaAI	YACGTR	1 cut(s)	1081
BsaHI	GRCGYC	1 cut(s)	1398
BsaJI	CCNNGG	2 cut(s)	419, 495
BsaWI	WCCGGW	1 cut(s)	59
Bsc4I	CCNNNNNNNGG	4 cut(s)	1327, 1409, 1482, 1539
Bse1I	ACTGG	3 cut(s)	469, 654, 1139
Bse3DI	GCAATG	1 cut(s)	1300
BseBI	CCWGG	2 cut(s)	1155, 1328
BseDI	CCNNGG	2 cut(s)	419, 495
BseGI	GGATG	7 cut(s)	120, 484, 521, 877, 932, 1168, 1792
BseLI	CCNNNNNNNGG	4 cut(s)	1327, 1409, 1482, 1539
BseMI	GCAATG	1 cut(s)	1300
BseMII	CTCAG	4 cut(s)	627, 1034, 1472, 1708
BseNI	ACTGG	3 cut(s)	469, 654, 1139
BseRI	GAGGAG	1 cut(s)	58
BseX3I	CGGCCG	1 cut(s)	46
BseXI	GCAGC	3 cut(s)	1473, 1481, 1710
BsgI	GTGCAG	1 cut(s)	268
Bsh1236I	CGCG	1 cut(s)	45
Bsh1285I	CGRYCG	1 cut(s)	49
BshFI	GGCC	3 cut(s)	48, 611, 1866
BshNI	GGYRCC	1 cut(s)	77
BsiEI	CGRYCG	1 cut(s)	49
BsiHKCI	CYCGRG	2 cut(s)	806, 1586
BsiSI	CCGG	1 cut(s)	60
BslFI	GGGAC	1 cut(s)	1385
BslI	CCNNNNNNNGG	4 cut(s)	1327, 1409, 1482, 1539
BsmAI	GTCTC	3 cut(s)	538, 983, 1375
BsmBI	CGTCTC	1 cut(s)	538
BsmFI	GGGAC	1 cut(s)	1385
BsmI	GAATGC	1 cut(s)	1074
BsnI	GGCC	3 cut(s)	48, 611, 1866
BsoBI	CYCGRG	2 cut(s)	806, 1586
Bsp1407I	TGTACA	1 cut(s)	746
Bsp143I	GATC	7 cut(s)	481, 1000, 1030, 1209, 1267, 1634, 1660
Bsp19I	CCATGG	2 cut(s)	419, 495
BspACI	CCGC	3 cut(s)	45, 780, 1867
BspANI	GGCC	3 cut(s)	48, 611, 1866
BspCNI	CTCAG	4 cut(s)	628, 1035, 1473, 1707
BspFNI	CGCG	1 cut(s)	45
BspHI	TCATGA	2 cut(s)	688, 1129
BspLI	GGNNCC	3 cut(s)	64, 79, 955
BspMI	ACCTGC	1 cut(s)	330
BspPI	GGATC	6 cut(s)	476, 995, 1025, 1217, 1275, 1642
BspT107I	GGYRCC	1 cut(s)	77
BsrDI	GCAATG	1 cut(s)	1300
BsrGI	TGTACA	1 cut(s)	746
BsrI	ACTGG	3 cut(s)	469, 654, 1139
BssECI	CCNNGG	2 cut(s)	419, 495
BssMI	GATC	7 cut(s)	481, 1000, 1030, 1209, 1267, 1634, 1660
BssNI	GRCGYC	1 cut(s)	1398
BssT1I	CCWWGG	2 cut(s)	419, 495
Bst2UI	CCWGG	2 cut(s)	1155, 1328
Bst4CI	ACNGT	7 cut(s)	214, 277, 599, 746, 848, 1016, 1430
Bst6I	CTCTTC	3 cut(s)	290, 964, 1799
BstACI	GRCGYC	1 cut(s)	1398
BstAUI	TGTACA	1 cut(s)	746
BstBAI	YACGTR	1 cut(s)	1081
BstC8I	GCNNGC	2 cut(s)	1411, 1741
BstDEI	CTNAG	6 cut(s)	578, 636, 785, 1043, 1481, 1694
BstDSI	CCRYGG	2 cut(s)	419, 495
BstENI	CCTNNNNNAGG	1 cut(s)	1480
BstF5I	GGATG	7 cut(s)	120, 484, 521, 877, 932, 1168, 1792
BstFNI	CGCG	1 cut(s)	45
BstHHI	GCGC	1 cut(s)	1125
BstKTI	GATC	7 cut(s)	484, 1003, 1033, 1212, 1270, 1637, 1663
BstMAI	GTCTC	3 cut(s)	538, 983, 1375
BstMBI	GATC	7 cut(s)	481, 1000, 1030, 1209, 1267, 1634, 1660
BstMCI	CGRYCG	1 cut(s)	49
BstMWI	GCNNNNNNNGC	4 cut(s)	51, 390, 1466, 1486
BstNI	CCWGG	2 cut(s)	1155, 1328
BstNSI	RCATGY	3 cut(s)	397, 459, 970
BstPAI	GACNNNNGTC	1 cut(s)	969
BstSCI	CCNGG	2 cut(s)	1153, 1326
BstUI	CGCG	1 cut(s)	45
BstV1I	GCAGC	3 cut(s)	1473, 1481, 1710
BstV2I	GAAGAC	2 cut(s)	10, 1723
BstX2I	RGATCY	2 cut(s)	1209, 1660
BstYI	RGATCY	2 cut(s)	1209, 1660
BstZI	CGGCCG	1 cut(s)	46
BsuRI	GGCC	3 cut(s)	48, 611, 1866
BtgI	CCRYGG	2 cut(s)	419, 495
BtsCI	GGATG	7 cut(s)	120, 484, 521, 877, 932, 1168, 1792
BtsIMutI	CAGTG	1 cut(s)	661
BveI	ACCTGC	1 cut(s)	330
Cac8I	GCNNGC	2 cut(s)	1411, 1741
CaiI	CAGNNNCTG	1 cut(s)	437
CciI	TCATGA	2 cut(s)	688, 1129
CfoI	GCGC	1 cut(s)	1125
Cfr13I	GGNCC	4 cut(s)	1151, 1530, 1758, 1864
CsiI	ACCWGGT	1 cut(s)	1153
Csp6I	GTAC	6 cut(s)	78, 185, 273, 742, 747, 920
CviQI	GTAC	6 cut(s)	78, 185, 273, 742, 747, 920
DdeI	CTNAG	6 cut(s)	578, 636, 785, 1043, 1481, 1694
DpnI	GATC	7 cut(s)	483, 1002, 1032, 1211, 1269, 1636, 1662
DpnII	GATC	7 cut(s)	481, 1000, 1030, 1209, 1267, 1634, 1660
DraI	TTTAAA	1 cut(s)	1599
EaeI	YGGCCR	1 cut(s)	46
EagI	CGGCCG	1 cut(s)	46
Eam1104I	CTCTTC	3 cut(s)	290, 964, 1799
EarI	CTCTTC	3 cut(s)	290, 964, 1799
EclXI	CGGCCG	1 cut(s)	46
Eco130I	CCWWGG	2 cut(s)	419, 495
Eco32I	GATATC	2 cut(s)	908, 1257
Eco47I	GGWCC	3 cut(s)	1151, 1530, 1758
Eco52I	CGGCCG	1 cut(s)	46
Eco57I	CTGAAG	3 cut(s)	911, 945, 1729
Eco72I	CACGTG	1 cut(s)	1081
Eco88I	CYCGRG	2 cut(s)	806, 1586
EcoNI	CCTNNNNNAGG	1 cut(s)	1480
EcoRI	GAATTC	3 cut(s)	500, 625, 1496
EcoRII	CCWGG	2 cut(s)	1153, 1326
EcoRV	GATATC	2 cut(s)	908, 1257
EcoT14I	CCWWGG	2 cut(s)	419, 495
EcoT22I	ATGCAT	1 cut(s)	1842
ErhI	CCWWGG	2 cut(s)	419, 495
Esp3I	CGTCTC	1 cut(s)	538
FalI	AAGNNNNNCTT	6 cut(s)	126, 158, 191, 223, 909, 941
FaqI	GGGAC	1 cut(s)	1385
Fnu4HI	GCNGC	5 cut(s)	46, 1470, 1487, 1699, 1867
FokI	GGATG	7 cut(s)	107, 491, 528, 884, 919, 1175, 1799
Fsp4HI	GCNGC	5 cut(s)	46, 1470, 1487, 1699, 1867
FspBI	CTAG	3 cut(s)	1334, 1421, 1770
FspI	TGCGCA	1 cut(s)	1124
GlaI	GCGC	1 cut(s)	1124
GluI	GCNGC	5 cut(s)	46, 1470, 1487, 1699, 1867
HaeIII	GGCC	3 cut(s)	48, 611, 1866
HapII	CCGG	1 cut(s)	60
HhaI	GCGC	1 cut(s)	1125
Hin1I	GRCGYC	1 cut(s)	1398
Hin6I	GCGC	1 cut(s)	1123
HinP1I	GCGC	1 cut(s)	1123
HincII	GTYRAC	2 cut(s)	378, 1396
HindII	GTYRAC	2 cut(s)	378, 1396
HinfI	GANTC	9 cut(s)	15, 533, 560, 638, 650, 875, 1047, 1180, 1646
HpaI	GTTAAC	1 cut(s)	378
HpaII	CCGG	1 cut(s)	60
HphI	GGTGA	4 cut(s)	49, 214, 311, 380
Hpy166II	GTNNAC	5 cut(s)	205, 223, 378, 791, 1396
Hpy8I	GTNNAC	5 cut(s)	205, 223, 378, 791, 1396
Hpy99I	CGWCG	1 cut(s)	617
HpyAV	CCTTC	6 cut(s)	93, 136, 544, 565, 1034, 1724
HpyCH4III	ACNGT	7 cut(s)	214, 277, 599, 746, 848, 1016, 1430
HpyCH4IV	ACGT	3 cut(s)	1080, 1169, 1398
HpyF10VI	GCNNNNNNNGC	4 cut(s)	51, 390, 1466, 1486
HpyF3I	CTNAG	6 cut(s)	578, 636, 785, 1043, 1481, 1694
HpySE526I	ACGT	3 cut(s)	1080, 1169, 1398
Hsp92I	GRCGYC	1 cut(s)	1398
HspAI	GCGC	1 cut(s)	1123
KpnI	GGTACC	1 cut(s)	81
KspAI	GTTAAC	1 cut(s)	378
Kzo9I	GATC	7 cut(s)	481, 1000, 1030, 1209, 1267, 1634, 1660
LmnI	GCTCC	2 cut(s)	97, 1195
Lsp1109I	GCAGC	3 cut(s)	1473, 1481, 1710
LweI	GCATC	3 cut(s)	1153, 1396, 1777
MabI	ACCWGGT	1 cut(s)	1153
MaeI	CTAG	3 cut(s)	1334, 1421, 1770
MaeII	ACGT	3 cut(s)	1080, 1169, 1398
MaeIII	GTNAC	4 cut(s)	33, 518, 721, 887
MalI	GATC	7 cut(s)	483, 1002, 1032, 1211, 1269, 1636, 1662
MboI	GATC	7 cut(s)	481, 1000, 1030, 1209, 1267, 1634, 1660
MflI	RGATCY	2 cut(s)	1209, 1660
MlyI	GAGTC	2 cut(s)	24, 647
MmeI	TCCRAC	4 cut(s)	64, 493, 595, 1123
Mph1103I	ATGCAT	1 cut(s)	1842
MroXI	GAANNNNTTC	3 cut(s)	921, 958, 1713
MseI	TTAA	9 cut(s)	132, 209, 377, 389, 761, 813, 1535, 1598, 1885
MslI	CAYNNNNRTG	2 cut(s)	856, 1079
MspI	CCGG	1 cut(s)	60
MspR9I	CCNGG	2 cut(s)	1155, 1328
Mva1269I	GAATGC	1 cut(s)	1074
MvaI	CCWGG	2 cut(s)	1155, 1328
MvnI	CGCG	1 cut(s)	45
MwoI	GCNNNNNNNGC	4 cut(s)	51, 390, 1466, 1486
NcoI	CCATGG	2 cut(s)	419, 495
NdeII	GATC	7 cut(s)	481, 1000, 1030, 1209, 1267, 1634, 1660
NlaIV	GGNNCC	3 cut(s)	64, 79, 955
NsbI	TGCGCA	1 cut(s)	1124
NsiI	ATGCAT	1 cut(s)	1842
NspI	RCATGY	3 cut(s)	397, 459, 970
PaeR7I	CTCGAG	2 cut(s)	806, 1586
PagI	TCATGA	2 cut(s)	688, 1129
PaqCI	CACCTGC	1 cut(s)	330
PciI	ACATGT	1 cut(s)	966
PctI	GAATGC	1 cut(s)	1074
PdmI	GAANNNNTTC	3 cut(s)	921, 958, 1713
PfeI	GAWTC	7 cut(s)	533, 560, 650, 875, 1047, 1180, 1646
PflMI	CCANNNNNTGG	2 cut(s)	1327, 1409
PkrI	GCNGC	5 cut(s)	47, 1471, 1488, 1700, 1868
PleI	GAGTC	2 cut(s)	23, 646
PmaCI	CACGTG	1 cut(s)	1081
PmlI	CACGTG	1 cut(s)	1081
PpsI	GAGTC	2 cut(s)	23, 646
Ppu21I	YACGTR	1 cut(s)	1081
PscI	ACATGT	1 cut(s)	966
PshAI	GACNNNNGTC	1 cut(s)	969
PsiI	TTATAA	2 cut(s)	831, 884
Psp1406I	AACGTT	1 cut(s)	1169
Psp6I	CCWGG	2 cut(s)	1153, 1326
PspCI	CACGTG	1 cut(s)	1081
PspGI	CCWGG	2 cut(s)	1153, 1326
PspN4I	GGNNCC	3 cut(s)	64, 79, 955
PspPI	GGNCC	4 cut(s)	1151, 1530, 1758, 1864
PspXI	VCTCGAGB	1 cut(s)	806
PstNI	CAGNNNCTG	1 cut(s)	437
PsuI	RGATCY	2 cut(s)	1209, 1660
RsaI	GTAC	6 cut(s)	79, 186, 274, 743, 748, 921
RsaNI	GTAC	6 cut(s)	78, 185, 273, 742, 747, 920
RseI	CAYNNNNRTG	2 cut(s)	856, 1079
SaqAI	TTAA	9 cut(s)	132, 209, 377, 389, 761, 813, 1535, 1598, 1885
SatI	GCNGC	5 cut(s)	46, 1470, 1487, 1699, 1867
Sau3AI	GATC	7 cut(s)	481, 1000, 1030, 1209, 1267, 1634, 1660
Sau96I	GGNCC	4 cut(s)	1151, 1530, 1758, 1864
ScaI	AGTACT	1 cut(s)	921
SchI	GAGTC	2 cut(s)	24, 647
ScrFI	CCNGG	2 cut(s)	1155, 1328
SexAI	ACCWGGT	1 cut(s)	1153
SfaNI	GCATC	3 cut(s)	1153, 1396, 1777
Sfr274I	CTCGAG	2 cut(s)	806, 1586
SinI	GGWCC	3 cut(s)	1151, 1530, 1758
SlaI	CTCGAG	2 cut(s)	806, 1586
SmiMI	CAYNNNNRTG	2 cut(s)	856, 1079
SmlI	CTYRAG	6 cut(s)	232, 679, 806, 1037, 1378, 1586
SmoI	CTYRAG	6 cut(s)	232, 679, 806, 1037, 1378, 1586
SsiI	CCGC	3 cut(s)	45, 780, 1867
SspMI	CTAG	3 cut(s)	1334, 1421, 1770
StyD4I	CCNGG	2 cut(s)	1153, 1326
StyI	CCWWGG	2 cut(s)	419, 495
TaaI	ACNGT	7 cut(s)	214, 277, 599, 746, 848, 1016, 1430
TaiI	ACGT	3 cut(s)	1083, 1172, 1401
TaqI	TCGA	3 cut(s)	166, 807, 1587
TatI	WGTACW	4 cut(s)	272, 741, 746, 919
TauI	GCSGC	2 cut(s)	48, 1869
TfiI	GAWTC	7 cut(s)	533, 560, 650, 875, 1047, 1180, 1646
Tru1I	TTAA	9 cut(s)	132, 209, 377, 389, 761, 813, 1535, 1598, 1885
Tru9I	TTAA	9 cut(s)	132, 209, 377, 389, 761, 813, 1535, 1598, 1885
TscAI	CASTG	1 cut(s)	661
TseI	GCWGC	3 cut(s)	1469, 1486, 1698
TspDTI	ATGAA	7 cut(s)	552, 705, 840, 954, 1506, 1551, 1722
TspGWI	ACGGA	3 cut(s)	231, 562, 1565
TspRI	CASTG	1 cut(s)	661
Van91I	CCANNNNNTGG	2 cut(s)	1327, 1409
VpaK11BI	GGWCC	3 cut(s)	1151, 1530, 1758
XagI	CCTNNNNNAGG	1 cut(s)	1480
XapI	RAATTY	9 cut(s)	341, 424, 490, 500, 625, 943, 1496, 1593, 1751
XbaI	TCTAGA	2 cut(s)	1333, 1420
XceI	RCATGY	3 cut(s)	397, 459, 970
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1446
XhoI	CTCGAG	2 cut(s)	806, 1586
XmnI	GAANNNNTTC	3 cut(s)	921, 958, 1713
XspI	CTAG	3 cut(s)	1334, 1421, 1770
ZraI	GACGTC	1 cut(s)	1399
ZrmI	AGTACT	1 cut(s)	921
Zsp2I	ATGCAT	1 cut(s)	1842

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.