Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005157

Physical Location & Seq

Genomic Coordinates Reverse (-)

8329906 .. 8331864

Gene Structure 1959 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G14480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1464 bp

ATGGCTCGGAACAAGCTCGAGTTCCCTCTTGATGCTGAAGCCTACGAGATCATCTGCAAGATAGGCGTTGGTGTTAGTGCTTCGGTCTACAAGGCCATATGCATTCCGATGAACTCAATGGTAGTTGCTATCAAAGCCATCGATCTTGATCAGTCGCGGGCTGACTTTGACAGTCTTCGCCGTGAAACCAAGACGATGTCTCTGCTTTCTCATCCGAATATTCTCAATGCTTATTGTTCATTCACCGTTGATCGATGTCTCTGGGTGGTTATGCCATTCATGTCTTGTGGCTCTCTTCATTCGATCGTCTCTTCGTCTTTTCCAAGTGGGTTACCAGAAAACTGCATTTCCGTCTTCCTCAAGGAAACTCTGAATGCAATCTCGTATCTTCACGATCAGGGTCATTTGCACCGTGACATCAAGGCAGGTAACATTCTGGTAGATTCTGATGGATCCGTGAAGCTCGCTGATTTCGGAGTATCTGCATCCATCTATGAACCCGTGACATCTTCCTCTGGAACAACATCTTCTTCTTTAAGGTTAACTGATATAGCGGGAACACCGTATTGGATGGCTCCGGAAGTGGTTCATTCCCACACAGGGTATGGTTTCAAAGCAGACATTTGGTCTTTCGGGATAACAGCGTTGGAGTTAGCACATGGAAGACCTCCGTTATCTCACTTACCGCCGTTGAAGAGTCTGCTCATGAAGATCACCAAAAGGTTTCATTTTTCTGATTACGAGATCAATACGAGCGGAAGCAGCAAAAAGGGTAACAAGAAGTTCTCAAAAGCTTTTAGAGAAATGGTTGGTTTGTGTCTAGAGCAAGATCCTACTAAAAGACCATCGGCAGAGAAGTTGTTGAAGCATCCTTTTTTCAAGAACTGTAAAGGACTCGACTTTGTGGTCAAGAACGTGTTGCATAGCTTGTCAAACGCAGAGCAGATGTTTATGGAGAGTCAGATTTTGATCAAGAGTGTTGGAGATGATGATGAAGAAGAAGAAGAAGAAGACGAAGAGATAGTGAAGAATAGAAGAATCAGTGGGTGGAATTTCCGTGAAGACGATCTCCAACTTAGTCCAGTGTTCCCAGCTACTGAATCAGACTCTTCTGAGTCCAGTCCACGTGAAGAAGATCAATCAAAAGACAAAAAGGAAGACGATAACGTCACAATAACGGGGTATGAACTCGGTTTAGGTTTGTCGAACGAGGAAGCTAAGAACCAAGAAGGTGAGGTTGTTGGGTTTGATAAAGATTTGGTGTTAGAGAAACTGAAAGTGTTGAAGAAAAGTTTAGAGCATCAAAGAGCAAGAGTGTCGATTATAATCGAAGCATTGAGTGGGGACAAGGAAGAGAAGAGCAGAGAAGAAGAGCTTCTAGAGATGGTGGAGAAGTTAAAGATTGAATTGGAAACTGAGAAGCTAAAGACCTTGCGTGCTGATAAAGATAGTGTTTTGGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010119 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902456

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

487

Amino Acids

54.38

Weight (kDa)

5.26

Isoelectric Point (pI)

46.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	15 - 293	5.8e-59	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	17 - 289	2.3e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005157)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14480
fragaria_vesca	FvH4_4g03000
malus_domestica	MD01G1106400.v1.1 MD01G1106800.v1.1 MD02G1095900.v1.1 MD04G1063400.v1.1 MD04G1063500.v1.1 MD07G1020600.v1.1 MD07G1020800.v1.1 MD16G1212100.v1.1
prunus_persica	Prupe.1G031800_v2.0.a1 Prupe.1G033800_v2.0.a1 Prupe.1G034000_v2.0.a1 Prupe.4G193100_v2.0.a1
pyrus_communis	pycom01g13320 pycom01g13330 pycom01g13350 pycom07g01600 pycom16g17810
rosa_chinensis	RchiOBHm_Chr4g0391181
rosa_laevigata	RLG00000009879
rosa_multiflora	Rmu_co8201760.1_g000001 Rmu_sc0000040.1_g000009
rosa_roxburghii	Rroxscaffold_5G00336980
rosa_rugosa	Rorug03G0334900
rosa_samantha	Rh4AG035700 Rh4BG030700 Rh4CG039000 Rh4DG033200
rosa_wichuraiana	Rw4G002800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1325
AasI	GACNNNNNNGTC	2 cut(s)	905, 1166
Acc36I	ACCTGC	1 cut(s)	416
AccBSI	CCGCTC	1 cut(s)	756
AccI	GTMKAC	1 cut(s)	87
AccII	CGCG	1 cut(s)	157
AccIII	TCCGGA	1 cut(s)	577
AciI	CCGC	4 cut(s)	157, 554, 686, 756
AclWI	GGATC	3 cut(s)	447, 460, 824
AcsI	RAATTY	1 cut(s)	1051
AcuI	CTGAAG	1 cut(s)	57
AcvI	CACGTG	1 cut(s)	1127
AfiI	CCNNNNNNNGG	1 cut(s)	600
AflIII	ACRYGT	1 cut(s)	915
AgsI	TTSAA	6 cut(s)	613, 694, 865, 880, 1285, 1406
AhdI	GACNNNNNGTC	1 cut(s)	625
AjuI	GAANNNNNNNTTGG	2 cut(s)	550, 582
AluBI	AGCT	8 cut(s)	16, 463, 794, 927, 1094, 1217, 1375, 1423
AluI	AGCT	8 cut(s)	16, 463, 794, 927, 1094, 1217, 1375, 1423
Alw26I	GTCTC	3 cut(s)	204, 263, 313
AlwI	GGATC	3 cut(s)	447, 460, 824
AlwNI	CAGNNNCTG	1 cut(s)	1097
Ama87I	CYCGRG	1 cut(s)	17
Aor13HI	TCCGGA	1 cut(s)	577
AoxI	GGCC	1 cut(s)	93
ApeKI	GCWGC	1 cut(s)	762
ApoI	RAATTY	1 cut(s)	1051
Asp700I	GAANNNNTTC	2 cut(s)	585, 1374
AsuHPI	GGTGA	3 cut(s)	235, 706, 1244
AvaI	CYCGRG	1 cut(s)	17
BamHI	GGATCC	1 cut(s)	452
BbrPI	CACGTG	1 cut(s)	1127
BbsI	GAAGAC	6 cut(s)	167, 346, 670, 1017, 1068, 1164
BbvI	GCAGC	1 cut(s)	774
BccI	CCATC	6 cut(s)	146, 443, 497, 565, 853, 1378
BceAI	ACGGC	2 cut(s)	165, 673
BcgI	CGANNNNNNTGC	4 cut(s)	184, 218, 1299, 1333
BclI	TGATCA	2 cut(s)	148, 969
BcoDI	GTCTC	3 cut(s)	204, 263, 313
BfaI	CTAG	2 cut(s)	821, 1379
BfuAI	ACCTGC	1 cut(s)	416
BisI	GCNGC	1 cut(s)	763
BlsI	GCNGC	1 cut(s)	764
BmeRI	GACNNNNNGTC	1 cut(s)	625
BmeT110I	CYCGRG	1 cut(s)	17
BmiI	GGNNCC	2 cut(s)	454, 576
BmsI	GCATC	4 cut(s)	22, 494, 877, 1309
BpiI	GAAGAC	6 cut(s)	167, 346, 670, 1017, 1068, 1164
BpuEI	CTTGAG	1 cut(s)	344
Bsa29I	ATCGAT	2 cut(s)	141, 253
BsaAI	YACGTR	1 cut(s)	1127
BsaBI	GATNNNNATC	3 cut(s)	147, 968, 1325
BsaWI	WCCGGW	1 cut(s)	577
Bsc4I	CCNNNNNNNGG	1 cut(s)	600
Bse1I	ACTGG	2 cut(s)	1082, 1119
Bse8I	GATNNNNATC	3 cut(s)	147, 968, 1325
BseAI	TCCGGA	1 cut(s)	577
BseCI	ATCGAT	2 cut(s)	141, 253
BseGI	GGATG	4 cut(s)	211, 485, 576, 868
BseJI	GATNNNNATC	3 cut(s)	147, 968, 1325
BseLI	CCNNNNNNNGG	1 cut(s)	600
BseMII	CTCAG	2 cut(s)	1104, 1407
BseNI	ACTGG	2 cut(s)	1082, 1119
BseXI	GCAGC	1 cut(s)	774
BseYI	CCCAGC	1 cut(s)	1090
Bsh1236I	CGCG	1 cut(s)	157
Bsh1285I	CGRYCG	1 cut(s)	306
BshFI	GGCC	1 cut(s)	95
BshVI	ATCGAT	2 cut(s)	141, 253
BsiEI	CGRYCG	1 cut(s)	306
BsiHKCI	CYCGRG	1 cut(s)	17
BsiSI	CCGG	1 cut(s)	578
BslFI	GGGAC	1 cut(s)	1358
BslI	CCNNNNNNNGG	1 cut(s)	600
BsmAI	GTCTC	3 cut(s)	204, 263, 313
BsmBI	CGTCTC	1 cut(s)	313
BsmFI	GGGAC	1 cut(s)	1358
BsmI	GAATGC	2 cut(s)	102, 379
BsnI	GGCC	1 cut(s)	95
BsoBI	CYCGRG	1 cut(s)	17
Bsp13I	TCCGGA	1 cut(s)	577
BspACI	CCGC	4 cut(s)	157, 554, 686, 756
BspANI	GGCC	1 cut(s)	95
BspCNI	CTCAG	2 cut(s)	1105, 1408
BspDI	ATCGAT	2 cut(s)	141, 253
BspEI	TCCGGA	1 cut(s)	577
BspFNI	CGCG	1 cut(s)	157
BspHI	TCATGA	1 cut(s)	705
BspLI	GGNNCC	2 cut(s)	454, 576
BspMI	ACCTGC	1 cut(s)	416
BspPI	GGATC	3 cut(s)	447, 460, 824
BspQI	GCTCTTC	2 cut(s)	1352, 1365
BsrBI	CCGCTC	1 cut(s)	756
BsrI	ACTGG	2 cut(s)	1082, 1119
Bst4CI	ACNGT	5 cut(s)	173, 247, 413, 564, 887
Bst6I	CTCTTC	8 cut(s)	300, 316, 689, 1011, 1114, 1347, 1352, 1365
BstBAI	YACGTR	1 cut(s)	1127
BstC8I	GCNNGC	3 cut(s)	159, 465, 1437
BstDEI	CTNAG	4 cut(s)	1076, 1113, 1218, 1416
BstEII	GGTNACC	1 cut(s)	330
BstF5I	GGATG	4 cut(s)	211, 485, 576, 868
BstFNI	CGCG	1 cut(s)	157
BstMAI	GTCTC	3 cut(s)	204, 263, 313
BstMCI	CGRYCG	1 cut(s)	306
BstMWI	GCNNNNNNNGC	3 cut(s)	63, 134, 762
BstPI	GGTNACC	1 cut(s)	330
BstUI	CGCG	1 cut(s)	157
BstV1I	GCAGC	1 cut(s)	774
BstV2I	GAAGAC	6 cut(s)	167, 346, 670, 1017, 1068, 1164
BstX2I	RGATCY	2 cut(s)	452, 829
BstYI	RGATCY	2 cut(s)	452, 829
Bsu15I	ATCGAT	2 cut(s)	141, 253
BsuRI	GGCC	1 cut(s)	95
BsuTUI	ATCGAT	2 cut(s)	141, 253
BtsCI	GGATG	4 cut(s)	211, 485, 576, 868
BtsIMutI	CAGTG	2 cut(s)	1048, 1089
BveI	ACCTGC	1 cut(s)	416
Cac8I	GCNNGC	3 cut(s)	159, 465, 1437
CaiI	CAGNNNCTG	1 cut(s)	1097
CciI	TCATGA	1 cut(s)	705
ClaI	ATCGAT	2 cut(s)	141, 253
CviAII	CATG	3 cut(s)	280, 659, 706
DdeI	CTNAG	4 cut(s)	1076, 1113, 1218, 1416
DrdI	GACNNNNNNGTC	2 cut(s)	905, 1166
DriI	GACNNNNNGTC	1 cut(s)	625
DseDI	GACNNNNNNGTC	2 cut(s)	905, 1166
Eam1104I	CTCTTC	8 cut(s)	300, 316, 689, 1011, 1114, 1347, 1352, 1365
Eam1105I	GACNNNNNGTC	1 cut(s)	625
EarI	CTCTTC	8 cut(s)	300, 316, 689, 1011, 1114, 1347, 1352, 1365
Eco57I	CTGAAG	1 cut(s)	57
Eco72I	CACGTG	1 cut(s)	1127
Eco88I	CYCGRG	1 cut(s)	17
Eco91I	GGTNACC	1 cut(s)	330
EcoO65I	GGTNACC	1 cut(s)	330
EcoT22I	ATGCAT	1 cut(s)	104
Esp3I	CGTCTC	1 cut(s)	313
FaeI	CATG	3 cut(s)	283, 662, 709
FalI	AAGNNNNNCTT	2 cut(s)	1359, 1391
FaqI	GGGAC	1 cut(s)	1358
FatI	CATG	3 cut(s)	279, 658, 705
FauI	CCCGC	2 cut(s)	150, 547
FauNDI	CATATG	1 cut(s)	98
FbaI	TGATCA	2 cut(s)	148, 969
FblI	GTMKAC	1 cut(s)	87
Fnu4HI	GCNGC	1 cut(s)	763
FokI	GGATG	4 cut(s)	198, 472, 583, 855
Fsp4HI	GCNGC	1 cut(s)	763
FspBI	CTAG	2 cut(s)	821, 1379
GluI	GCNGC	1 cut(s)	763
GsaI	CCCAGC	1 cut(s)	1094
HaeIII	GGCC	1 cut(s)	95
HapII	CCGG	1 cut(s)	578
Hin1II	CATG	3 cut(s)	283, 662, 709
HincII	GTYRAC	1 cut(s)	543
HindII	GTYRAC	1 cut(s)	543
HindIII	AAGCTT	1 cut(s)	792
HinfI	GANTC	8 cut(s)	443, 697, 894, 958, 1038, 1100, 1106, 1115
HpaI	GTTAAC	1 cut(s)	543
HpaII	CCGG	1 cut(s)	578
HphI	GGTGA	3 cut(s)	235, 706, 1244
Hpy166II	GTNNAC	3 cut(s)	88, 543, 1124
Hpy8I	GTNNAC	3 cut(s)	88, 543, 1124
HpyAV	CCTTC	1 cut(s)	1223
HpyCH4III	ACNGT	5 cut(s)	173, 247, 413, 564, 887
HpyCH4IV	ACGT	3 cut(s)	915, 1126, 1167
HpyCH4V	TGCA	7 cut(s)	57, 102, 345, 377, 409, 485, 922
HpyF10VI	GCNNNNNNNGC	3 cut(s)	63, 134, 762
HpyF3I	CTNAG	4 cut(s)	1076, 1113, 1218, 1416
HpySE526I	ACGT	3 cut(s)	915, 1126, 1167
Hsp92II	CATG	3 cut(s)	283, 662, 709
Kpn2I	TCCGGA	1 cut(s)	577
Ksp22I	TGATCA	2 cut(s)	148, 969
KspAI	GTTAAC	1 cut(s)	543
LguI	GCTCTTC	2 cut(s)	1352, 1365
LmnI	GCTCC	1 cut(s)	580
Lsp1109I	GCAGC	1 cut(s)	774
LweI	GCATC	4 cut(s)	22, 494, 877, 1309
MaeI	CTAG	2 cut(s)	821, 1379
MaeII	ACGT	3 cut(s)	915, 1126, 1167
MaeIII	GTNAC	6 cut(s)	330, 413, 428, 502, 773, 1168
MbiI	CCGCTC	1 cut(s)	756
MflI	RGATCY	2 cut(s)	452, 829
MluCI	AATT	2 cut(s)	1051, 1406
MlyI	GAGTC	5 cut(s)	706, 888, 967, 1100, 1124
MmeI	TCCRAC	3 cut(s)	627, 961, 1096
MnlI	CCTC	6 cut(s)	36, 368, 523, 678, 1204, 1228
Mph1103I	ATGCAT	1 cut(s)	104
MroI	TCCGGA	1 cut(s)	577
MroXI	GAANNNNTTC	2 cut(s)	585, 1374
MseI	TTAA	4 cut(s)	536, 542, 1397, 1462
MslI	CAYNNNNRTG	1 cut(s)	107
MspI	CCGG	1 cut(s)	578
Mva1269I	GAATGC	2 cut(s)	102, 379
MvnI	CGCG	1 cut(s)	157
MwoI	GCNNNNNNNGC	3 cut(s)	63, 134, 762
NdeI	CATATG	1 cut(s)	98
NlaIII	CATG	3 cut(s)	283, 662, 709
NlaIV	GGNNCC	2 cut(s)	454, 576
NmuCI	GTSAC	3 cut(s)	413, 502, 1168
NsiI	ATGCAT	1 cut(s)	104
PaeR7I	CTCGAG	1 cut(s)	17
PagI	TCATGA	1 cut(s)	705
PciSI	GCTCTTC	2 cut(s)	1352, 1365
PctI	GAATGC	2 cut(s)	102, 379
PdmI	GAANNNNTTC	2 cut(s)	585, 1374
PfeI	GAWTC	3 cut(s)	443, 1038, 1100
PflFI	GACNNNGTC	1 cut(s)	196
PkrI	GCNGC	1 cut(s)	764
Ple19I	CGATCG	1 cut(s)	306
PleI	GAGTC	5 cut(s)	705, 888, 966, 1100, 1123
PmaCI	CACGTG	1 cut(s)	1127
PmlI	CACGTG	1 cut(s)	1127
PpsI	GAGTC	5 cut(s)	705, 888, 966, 1100, 1123
Ppu21I	YACGTR	1 cut(s)	1127
PsiI	TTATAA	1 cut(s)	1325
PspCI	CACGTG	1 cut(s)	1127
PspEI	GGTNACC	1 cut(s)	330
PspFI	CCCAGC	1 cut(s)	1090
PspN4I	GGNNCC	2 cut(s)	454, 576
PspXI	VCTCGAGB	1 cut(s)	17
PstNI	CAGNNNCTG	1 cut(s)	1097
PsuI	RGATCY	2 cut(s)	452, 829
PsyI	GACNNNGTC	1 cut(s)	196
PvuI	CGATCG	1 cut(s)	306
RseI	CAYNNNNRTG	1 cut(s)	107
SapI	GCTCTTC	2 cut(s)	1352, 1365
SaqAI	TTAA	4 cut(s)	536, 542, 1397, 1462
SatI	GCNGC	1 cut(s)	763
SchI	GAGTC	5 cut(s)	706, 888, 967, 1100, 1124
SfaNI	GCATC	4 cut(s)	22, 494, 877, 1309
Sfr274I	CTCGAG	1 cut(s)	17
SlaI	CTCGAG	1 cut(s)	17
SmiMI	CAYNNNNRTG	1 cut(s)	107
SmlI	CTYRAG	2 cut(s)	17, 359
SmoI	CTYRAG	2 cut(s)	17, 359
Sse9I	AATT	2 cut(s)	1051, 1406
SsiI	CCGC	4 cut(s)	157, 554, 686, 756
SspI	AATATT	1 cut(s)	220
SspMI	CTAG	2 cut(s)	821, 1379
TaaI	ACNGT	5 cut(s)	173, 247, 413, 564, 887
TaiI	ACGT	3 cut(s)	918, 1129, 1170
TaqI	TCGA	8 cut(s)	18, 141, 253, 302, 897, 1205, 1319, 1329
TaqII	GACCGA	1 cut(s)	73
TasI	AATT	2 cut(s)	1051, 1406
TfiI	GAWTC	3 cut(s)	443, 1038, 1100
Tru1I	TTAA	4 cut(s)	536, 542, 1397, 1462
Tru9I	TTAA	4 cut(s)	536, 542, 1397, 1462
TscAI	CASTG	2 cut(s)	1048, 1089
TseFI	GTSAC	3 cut(s)	413, 502, 1168
TseI	GCWGC	1 cut(s)	762
Tsp45I	GTSAC	3 cut(s)	413, 502, 1168
TspGWI	ACGGA	4 cut(s)	340, 445, 660, 1046
TspRI	CASTG	2 cut(s)	1048, 1089
Tth111I	GACNNNGTC	1 cut(s)	196
XapI	RAATTY	1 cut(s)	1051
XbaI	TCTAGA	2 cut(s)	820, 1378
XcmI	CCANNNNNNNNNTGG	1 cut(s)	602
XhoI	CTCGAG	1 cut(s)	17
XmiI	GTMKAC	1 cut(s)	87
XmnI	GAANNNNTTC	2 cut(s)	585, 1374
XspI	CTAG	2 cut(s)	821, 1379
Zsp2I	ATGCAT	1 cut(s)	104

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.