Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0005157

Physical Location & Seq

Genomic Coordinates Forward (+)

5688348 .. 5690230

Gene Structure 1883 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG033200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGGCGGTTCATCACGAAGAACCCACATCGACTTCAAGAAAGCTCCACTTCCCTCTTGACTCCTCCGCCTACCAAATCCTCGGCGAGATCGGCTCCGGCGTCAGCGCCGTCGTCTACAAAGCCCTCTGCCCCTCCGTCAACTCCGCCGTGGTCGCCATCAAGTCCATCGACCTCGACCGCTCCCGCTCCGACTTCGACGCCTTCCGCCGCGAGACCAAAACGATGTCGCTTCTCTCCCACCCCAACATCCTCTCCGCCCACTGCTCCTTCACCGTCGACCGCCGCCTCTGGGTCGTCATGCCCTTCATGTCCGCCGGCTCCATCCAGTCCGTCATCTCCTCCTCCTTCCCAAACGGCATGTCGGAGCCCTGCATTGCCGTCATCCTCAAGGAAACCCTAAACGCCTTGTCGTATCTCCACGACCAGGGCCACCTCCACCGCGACATCAAGGCCAGCAACATCCTCATGGACTCCGACGGCTCCGTAAAGCTAGCCGACTTCGGCGTCTCCGCCTCGGTCTACGAGCCCAACTACCTCAACTCCAACTCCTCCTCCAAAACGTCGTCGTTTCGCCTCACCGACGTCGCCGGCACGCCGTACTGGATGGCTCCGGAAGTCGTGCACTCGCACAACGGCTACGGCTGCAAAGCCGACATCTGGTCTCTCGGGATCACCGCCCTCGAGCTGGCCCACGGCGGGCCGCCGCTGTCGCATCTCCCGCCGTCGAAGTCGCTGCTTCTGCGGATCACGAAGCGGTTCAACTTCTCGGATTACGAGACGCGCGGCGGTACGGACAAGAACAAGAGCAAGAAGTTCTCGAAGAGCTTCAAGGACTTGGTGGGCCTGTGTTTGGATCAAGACCCGAACAAGAGGCCCAACGCCGAGAAGCTTCTGAAGCACTCGTTTTTCAAGAACTGTAAAGGGGTTGATTTTCTGGCCAAGAATCTGCTGAATGGGCTGTCTAGTGTGGAAGAGAGGTTTAGGGTTTTGGGTGGCGTGTTGAGCAAGAGTGAGGAAGATGAAGATGATGATGATGATGAATCGGCGAGGGCGAGGGTTAGGAATCGGAGAATTAGTGGGTGGAATTTCAATGAGGATGGGCTTGATCTTCACCCAGTATTCCCAACTGAGTCAGGCAGCGATTCCGGTGGCAACTCAGTGTTTCCGACCGAGTCAAGTAGCGAGTCGGTTGGCAAGATGGTTCGGTTCAGCGGCGAAACTATCATTAGGTTGTCAAGTGAGTCGCACGAGTCGTATCTGAGTTCACCAGGTCGTGTTGTGGAGGAGGAGGGGGCCCATTTGGTGAGAGGAGATGAGTCAGGAGAGTCAATGGAGTCGAATCTGAGTTCACTTGTGGGTGTGCAGAGTCGGTATGGGGGTGTGGATAGTAATGCTGGGGGTGTTGATAGGGAGGCCATGGTGAGTGGGCTGACGGCGTTTATGAGGAGTTTGGATGAGCAGAGGAGCAATGTGGTGACTCTGATTGGTCTGTTGCGTGGGGAGGAAGTTGGGGAGGTGATGCTGAGCAGAGAGGAGCAGATGGGTCAAGTCATTGAGAGGATGAGAGTGGAGTTGGAAAATGAGAGGGAGAGGAATTTTCAGTTGGAGATGGAGTTGGAGTTTCTGAGGATTCAGATTTCTGGTGCTTACACAAGTACTAGTGCTGGTAGTATTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010119 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902456

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

559

Amino Acids

61.4

Weight (kDa)

5.44

Isoelectric Point (pI)

46.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	24 - 303	1.3e-58	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	27 - 299	7.6e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005157)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14480
fragaria_vesca	FvH4_4g03000
malus_domestica	MD01G1106400.v1.1 MD01G1106800.v1.1 MD02G1095900.v1.1 MD04G1063400.v1.1 MD04G1063500.v1.1 MD07G1020600.v1.1 MD07G1020800.v1.1 MD16G1212100.v1.1
prunus_persica	Prupe.1G031800_v2.0.a1 Prupe.1G033800_v2.0.a1 Prupe.1G034000_v2.0.a1 Prupe.4G193100_v2.0.a1
pyrus_communis	pycom01g13320 pycom01g13330 pycom01g13350 pycom07g01600 pycom16g17810
rosa_chinensis	RchiOBHm_Chr4g0391181
rosa_laevigata	RLG00000009879
rosa_multiflora	Rmu_co8201760.1_g000001 Rmu_sc0000040.1_g000009
rosa_roxburghii	Rroxscaffold_5G00336980
rosa_rugosa	Rorug03G0334900
rosa_samantha	Rh4AG035700 Rh4BG030700 Rh4CG039000 Rh4DG033200
rosa_wichuraiana	Rw4G002800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	503
AatII	GACGTC	1 cut(s)	585
AccBSI	CCGCTC	2 cut(s)	180, 186
AccI	GTMKAC	3 cut(s)	114, 276, 519
AccII	CGCG	4 cut(s)	210, 441, 781, 783
AccIII	TCCGGA	1 cut(s)	610
AclWI	GGATC	3 cut(s)	677, 752, 861
AcoI	YGGCCR	1 cut(s)	936
AcsI	RAATTY	2 cut(s)	1084, 1594
AcuI	CTGAAG	1 cut(s)	914
AcyI	GRCGYC	4 cut(s)	99, 198, 504, 582
AfaI	GTAC	3 cut(s)	599, 790, 1657
AfiI	CCNNNNNNNGG	6 cut(s)	289, 424, 657, 685, 696, 850
AgsI	TTSAA	5 cut(s)	36, 760, 829, 910, 1090
AhdI	GACNNNNNGTC	1 cut(s)	658
AhlI	ACTAGT	1 cut(s)	1658
AjnI	CCWGG	2 cut(s)	423, 1267
AjuI	GAANNNNNNNTTGG	2 cut(s)	1586, 1618
AluBI	AGCT	5 cut(s)	43, 490, 685, 825, 889
AluI	AGCT	5 cut(s)	43, 490, 685, 825, 889
Alw21I	GWGCWC	1 cut(s)	624
Alw26I	GTCTC	4 cut(s)	206, 511, 666, 770
Alw44I	GTGCAC	1 cut(s)	620
AlwI	GGATC	3 cut(s)	677, 752, 861
Ama87I	CYCGRG	2 cut(s)	665, 680
Aor13HI	TCCGGA	1 cut(s)	610
AoxI	GGCC	9 cut(s)	427, 450, 687, 698, 841, 872, 936, 1293, 1413
ApaI	GGGCCC	1 cut(s)	1297
ApaLI	GTGCAC	1 cut(s)	620
ApeKI	GCWGC	3 cut(s)	642, 733, 1137
ApoI	RAATTY	2 cut(s)	1084, 1594
ArsI	GACNNNNNNTTYG	2 cut(s)	344, 376
Asp700I	GAANNNNTTC	2 cut(s)	755, 824
AspLEI	GCGC	2 cut(s)	107, 783
AspS9I	GGNCC	7 cut(s)	427, 688, 698, 841, 873, 1293, 1294
AsuHPI	GGTGA	9 cut(s)	262, 568, 664, 1103, 1257, 1315, 1432, 1486, 1528
AsuNHI	GCTAGC	1 cut(s)	490
AvaI	CYCGRG	2 cut(s)	665, 680
BaeGI	GKGCMC	2 cut(s)	624, 1297
BalI	TGGCCA	1 cut(s)	938
BanII	GRGCYC	3 cut(s)	369, 528, 1297
BauI	CACGAG	1 cut(s)	1247
Bbv12I	GWGCWC	1 cut(s)	624
BbvI	GCAGC	3 cut(s)	629, 720, 1149
BccI	CCATC	8 cut(s)	164, 173, 329, 598, 1091, 1192, 1534, 1603
BcgI	CGANNNNNNTGC	2 cut(s)	715, 749
BciT130I	CCWGG	2 cut(s)	425, 1269
BcoDI	GTCTC	4 cut(s)	206, 511, 666, 770
BcuI	ACTAGT	1 cut(s)	1658
BfaI	CTAG	3 cut(s)	491, 963, 1659
BfoI	RGCGCY	1 cut(s)	108
BisI	GCNGC	9 cut(s)	208, 283, 643, 701, 704, 734, 784, 1138, 1213
BlpI	GCTNAGC	1 cut(s)	1523
BlsI	GCNGC	9 cut(s)	209, 284, 644, 702, 705, 735, 785, 1139, 1214
BmcAI	AGTACT	1 cut(s)	1657
Bme1390I	CCNGG	2 cut(s)	425, 1269
BmeRI	GACNNNNNGTC	1 cut(s)	658
BmeT110I	CYCGRG	2 cut(s)	665, 680
BmgT120I	GGNCC	7 cut(s)	427, 688, 698, 841, 873, 1293, 1294
BmiI	GGNNCC	7 cut(s)	94, 319, 366, 481, 609, 1294, 1295
BmrFI	CCNGG	2 cut(s)	425, 1269
BmrI	ACTGGG	1 cut(s)	1109
BmsI	GCATC	2 cut(s)	721, 1509
BmtI	GCTAGC	1 cut(s)	494
BmuI	ACTGGG	1 cut(s)	1109
BplI	GAGNNNNNCTC	2 cut(s)	77, 109
Bpu1102I	GCTNAGC	1 cut(s)	1523
BpuEI	CTTGAG	1 cut(s)	371
BsaHI	GRCGYC	4 cut(s)	99, 198, 504, 582
BsaI	GGTCTC	2 cut(s)	206, 666
BsaJI	CCNNGG	6 cut(s)	79, 147, 424, 513, 691, 1416
BsaWI	WCCGGW	2 cut(s)	610, 1145
Bsc4I	CCNNNNNNNGG	6 cut(s)	289, 424, 657, 685, 696, 850
Bse118I	RCCGGY	2 cut(s)	314, 587
Bse1I	ACTGG	3 cut(s)	325, 605, 1115
Bse3DI	GCAATG	2 cut(s)	372, 1474
BseAI	TCCGGA	1 cut(s)	610
BseBI	CCWGG	2 cut(s)	425, 1269
BseDI	CCNNGG	6 cut(s)	79, 147, 424, 513, 691, 1416
BseGI	GGATG	8 cut(s)	246, 321, 381, 459, 609, 1102, 1459, 1566
BseLI	CCNNNNNNNGG	6 cut(s)	289, 424, 657, 685, 696, 850
BseMI	GCAATG	2 cut(s)	372, 1474
BseMII	CTCAG	6 cut(s)	1119, 1170, 1250, 1334, 1514, 1616
BseNI	ACTGG	3 cut(s)	325, 605, 1115
BseSI	GKGCMC	2 cut(s)	624, 1297
BseXI	GCAGC	3 cut(s)	629, 720, 1149
BseYI	CCCAGC	1 cut(s)	1394
BsgI	GTGCAG	1 cut(s)	1382
Bsh1236I	CGCG	4 cut(s)	210, 441, 781, 783
Bsh1285I	CGRYCG	3 cut(s)	178, 280, 1170
BshFI	GGCC	9 cut(s)	429, 452, 689, 700, 843, 874, 938, 1295, 1415
BsiEI	CGRYCG	3 cut(s)	178, 280, 1170
BsiHKAI	GWGCWC	1 cut(s)	624
BsiHKCI	CYCGRG	2 cut(s)	665, 680
BsiSI	CCGG	5 cut(s)	96, 315, 588, 611, 1146
BslI	CCNNNNNNNGG	6 cut(s)	289, 424, 657, 685, 696, 850
BsmAI	GTCTC	4 cut(s)	206, 511, 666, 770
BsmBI	CGTCTC	2 cut(s)	511, 770
BsnI	GGCC	9 cut(s)	429, 452, 689, 700, 843, 874, 938, 1295, 1415
Bso31I	GGTCTC	2 cut(s)	206, 666
BsoBI	CYCGRG	2 cut(s)	665, 680
Bsp120I	GGGCCC	1 cut(s)	1293
Bsp1286I	GDGCHC	4 cut(s)	369, 528, 624, 1297
Bsp13I	TCCGGA	1 cut(s)	610
Bsp143I	GATC	5 cut(s)	87, 669, 744, 853, 1105
Bsp1720I	GCTNAGC	1 cut(s)	1523
Bsp19I	CCATGG	1 cut(s)	1416
BspANI	GGCC	9 cut(s)	429, 452, 689, 700, 843, 874, 938, 1295, 1415
BspCNI	CTCAG	6 cut(s)	1120, 1169, 1251, 1335, 1515, 1617
BspEI	TCCGGA	1 cut(s)	610
BspFNI	CGCG	4 cut(s)	210, 441, 781, 783
BspLI	GGNNCC	7 cut(s)	94, 319, 366, 481, 609, 1294, 1295
BspOI	GCTAGC	1 cut(s)	494
BspPI	GGATC	3 cut(s)	677, 752, 861
BspQI	GCTCTTC	1 cut(s)	815
BspTNI	GGTCTC	2 cut(s)	206, 666
BsrBI	CCGCTC	2 cut(s)	180, 186
BsrDI	GCAATG	2 cut(s)	372, 1474
BsrFI	RCCGGY	2 cut(s)	314, 587
BsrI	ACTGG	3 cut(s)	325, 605, 1115
BssAI	RCCGGY	2 cut(s)	314, 587
BssECI	CCNNGG	6 cut(s)	79, 147, 424, 513, 691, 1416
BssMI	GATC	5 cut(s)	87, 669, 744, 853, 1105
BssNI	GRCGYC	4 cut(s)	99, 198, 504, 582
BssSI	CACGAG	1 cut(s)	1247
BssT1I	CCWWGG	1 cut(s)	1416
Bst2BI	CACGAG	1 cut(s)	1247
Bst2UI	CCWGG	2 cut(s)	425, 1269
Bst4CI	ACNGT	2 cut(s)	274, 917
Bst6I	CTCTTC	2 cut(s)	815, 966
BstACI	GRCGYC	4 cut(s)	99, 198, 504, 582
BstC8I	GCNNGC	7 cut(s)	316, 454, 492, 589, 593, 687, 698
BstDEI	CTNAG	6 cut(s)	1128, 1156, 1259, 1343, 1523, 1625
BstDSI	CCRYGG	3 cut(s)	147, 691, 1416
BstF5I	GGATG	8 cut(s)	246, 321, 381, 459, 609, 1102, 1459, 1566
BstFNI	CGCG	4 cut(s)	210, 441, 781, 783
BstH2I	RGCGCY	1 cut(s)	108
BstHHI	GCGC	2 cut(s)	107, 783
BstKTI	GATC	5 cut(s)	90, 672, 747, 856, 1108
BstMAI	GTCTC	4 cut(s)	206, 511, 666, 770
BstMBI	GATC	5 cut(s)	87, 669, 744, 853, 1105
BstMCI	CGRYCG	3 cut(s)	178, 280, 1170
BstMWI	GCNNNNNNNGC	9 cut(s)	90, 152, 642, 709, 718, 739, 895, 955, 1002
BstNI	CCWGG	2 cut(s)	425, 1269
BstNSI	RCATGY	1 cut(s)	361
BstSCI	CCNGG	2 cut(s)	423, 1267
BstSLI	GKGCMC	2 cut(s)	624, 1297
BstUI	CGCG	4 cut(s)	210, 441, 781, 783
BstV1I	GCAGC	3 cut(s)	629, 720, 1149
BsuRI	GGCC	9 cut(s)	429, 452, 689, 700, 843, 874, 938, 1295, 1415
BtgI	CCRYGG	3 cut(s)	147, 691, 1416
BtsCI	GGATG	8 cut(s)	246, 321, 381, 459, 609, 1102, 1459, 1566
BtsI	GCAGTG	1 cut(s)	259
BtsIMutI	CAGTG	2 cut(s)	259, 1164
Cac8I	GCNNGC	7 cut(s)	316, 454, 492, 589, 593, 687, 698
CfoI	GCGC	2 cut(s)	107, 783
Cfr10I	RCCGGY	2 cut(s)	314, 587
Cfr13I	GGNCC	7 cut(s)	427, 688, 698, 841, 873, 1293, 1294
CseI	GACGC	4 cut(s)	88, 206, 493, 787
CsiI	ACCWGGT	1 cut(s)	1267
Csp6I	GTAC	3 cut(s)	598, 789, 1656
CviAII	CATG	5 cut(s)	298, 307, 358, 466, 1417
CviQI	GTAC	3 cut(s)	598, 789, 1656
DdeI	CTNAG	6 cut(s)	1128, 1156, 1259, 1343, 1523, 1625
DpnI	GATC	5 cut(s)	89, 671, 746, 855, 1107
DpnII	GATC	5 cut(s)	87, 669, 744, 853, 1105
DrdI	GACNNNNNNGTC	1 cut(s)	503
DriI	GACNNNNNGTC	1 cut(s)	658
DseDI	GACNNNNNNGTC	1 cut(s)	503
EaeI	YGGCCR	1 cut(s)	936
Eam1104I	CTCTTC	2 cut(s)	815, 966
Eam1105I	GACNNNNNGTC	1 cut(s)	658
EarI	CTCTTC	2 cut(s)	815, 966
EciI	GGCGGA	6 cut(s)	55, 133, 194, 244, 301, 499
Eco130I	CCWWGG	1 cut(s)	1416
Eco24I	GRGCYC	3 cut(s)	369, 528, 1297
Eco31I	GGTCTC	2 cut(s)	206, 666
Eco57I	CTGAAG	1 cut(s)	914
Eco88I	CYCGRG	2 cut(s)	665, 680
EcoO109I	RGGNCCY	1 cut(s)	1293
EcoRII	CCWGG	2 cut(s)	423, 1267
EcoT14I	CCWWGG	1 cut(s)	1416
EcoT38I	GRGCYC	3 cut(s)	369, 528, 1297
ErhI	CCWWGG	1 cut(s)	1416
Esp3I	CGTCTC	2 cut(s)	511, 770
FaeI	CATG	5 cut(s)	301, 310, 361, 469, 1420
FaiI	YATR	7 cut(s)	299, 308, 359, 467, 1374, 1418, 1442
FalI	AAGNNNNNCTT	2 cut(s)	32, 64
FatI	CATG	5 cut(s)	297, 306, 357, 465, 1416
FauI	CCCGC	3 cut(s)	191, 689, 726
FblI	GTMKAC	3 cut(s)	114, 276, 519
Fnu4HI	GCNGC	9 cut(s)	208, 283, 643, 701, 704, 734, 784, 1138, 1213
FokI	GGATG	8 cut(s)	233, 308, 368, 446, 616, 1109, 1466, 1573
FriOI	GRGCYC	3 cut(s)	369, 528, 1297
Fsp4HI	GCNGC	9 cut(s)	208, 283, 643, 701, 704, 734, 784, 1138, 1213
FspBI	CTAG	3 cut(s)	491, 963, 1659
GlaI	GCGC	2 cut(s)	106, 782
GluI	GCNGC	9 cut(s)	208, 283, 643, 701, 704, 734, 784, 1138, 1213
GsaI	CCCAGC	1 cut(s)	1398
HaeII	RGCGCY	1 cut(s)	108
HaeIII	GGCC	9 cut(s)	429, 452, 689, 700, 843, 874, 938, 1295, 1415
HapII	CCGG	5 cut(s)	96, 315, 588, 611, 1146
HgaI	GACGC	4 cut(s)	88, 206, 493, 787
HhaI	GCGC	2 cut(s)	107, 783
Hin1I	GRCGYC	4 cut(s)	99, 198, 504, 582
Hin1II	CATG	5 cut(s)	301, 310, 361, 469, 1420
Hin6I	GCGC	2 cut(s)	105, 781
HinP1I	GCGC	2 cut(s)	105, 781
HincII	GTYRAC	2 cut(s)	139, 277
HindII	GTYRAC	2 cut(s)	139, 277
HindIII	AAGCTT	1 cut(s)	887
HpaII	CCGG	5 cut(s)	96, 315, 588, 611, 1146
HphI	GGTGA	9 cut(s)	262, 568, 664, 1103, 1257, 1315, 1432, 1486, 1528
Hpy166II	GTNNAC	7 cut(s)	115, 139, 277, 520, 622, 1265, 1349
Hpy8I	GTNNAC	7 cut(s)	115, 139, 277, 520, 622, 1265, 1349
Hpy99I	CGWCG	9 cut(s)	113, 200, 278, 479, 565, 568, 584, 587, 727
HpyAV	CCTTC	4 cut(s)	211, 277, 313, 355
HpyCH4III	ACNGT	2 cut(s)	274, 917
HpyCH4IV	ACGT	2 cut(s)	560, 582
HpyCH4V	TGCA	4 cut(s)	372, 622, 645, 1363
HpyF10VI	GCNNNNNNNGC	9 cut(s)	90, 152, 642, 709, 718, 739, 895, 955, 1002
HpyF3I	CTNAG	6 cut(s)	1128, 1156, 1259, 1343, 1523, 1625
HpySE526I	ACGT	2 cut(s)	560, 582
Hsp92I	GRCGYC	4 cut(s)	99, 198, 504, 582
Hsp92II	CATG	5 cut(s)	301, 310, 361, 469, 1420
HspAI	GCGC	2 cut(s)	105, 781
Kpn2I	TCCGGA	1 cut(s)	610
KroI	GCCGGC	2 cut(s)	314, 587
KroNI	GCCGGC	2 cut(s)	316, 589
Kzo9I	GATC	5 cut(s)	87, 669, 744, 853, 1105
LguI	GCTCTTC	1 cut(s)	815
Lsp1109I	GCAGC	3 cut(s)	629, 720, 1149
LweI	GCATC	2 cut(s)	721, 1509
MabI	ACCWGGT	1 cut(s)	1267
MaeI	CTAG	3 cut(s)	491, 963, 1659
MaeII	ACGT	2 cut(s)	560, 582
MaeIII	GTNAC	1 cut(s)	1474
MalI	GATC	5 cut(s)	89, 671, 746, 855, 1107
MbiI	CCGCTC	2 cut(s)	180, 186
MboI	GATC	5 cut(s)	87, 669, 744, 853, 1105
MboII	GAAGA	6 cut(s)	29, 832, 983, 1028, 1034, 1100
MhlI	GDGCHC	4 cut(s)	369, 528, 624, 1297
MlsI	TGGCCA	1 cut(s)	938
MluCI	AATT	3 cut(s)	1071, 1084, 1594
MluNI	TGGCCA	1 cut(s)	938
MmeI	TCCRAC	8 cut(s)	213, 342, 498, 567, 1190, 1554, 1584, 1596
Mox20I	TGGCCA	1 cut(s)	938
MroI	TCCGGA	1 cut(s)	610
MroNI	GCCGGC	2 cut(s)	314, 587
MroXI	GAANNNNTTC	2 cut(s)	755, 824
MscI	TGGCCA	1 cut(s)	938
MslI	CAYNNNNRTG	1 cut(s)	464
Msp20I	TGGCCA	1 cut(s)	938
MspA1I	CMGCKG	2 cut(s)	706, 1212
MspI	CCGG	5 cut(s)	96, 315, 588, 611, 1146
MspR9I	CCNGG	2 cut(s)	425, 1269
MvaI	CCWGG	2 cut(s)	425, 1269
MvnI	CGCG	4 cut(s)	210, 441, 781, 783
MwoI	GCNNNNNNNGC	9 cut(s)	90, 152, 642, 709, 718, 739, 895, 955, 1002
NaeI	GCCGGC	2 cut(s)	316, 589
NcoI	CCATGG	1 cut(s)	1416
NdeII	GATC	5 cut(s)	87, 669, 744, 853, 1105
NgoMIV	GCCGGC	2 cut(s)	314, 587
NheI	GCTAGC	1 cut(s)	490
NlaIII	CATG	5 cut(s)	301, 310, 361, 469, 1420
NlaIV	GGNNCC	7 cut(s)	94, 319, 366, 481, 609, 1294, 1295
NmeAIII	GCCGAG	2 cut(s)	60, 907
NmuCI	GTSAC	1 cut(s)	1474
NspI	RCATGY	1 cut(s)	361
PaeR7I	CTCGAG	1 cut(s)	680
PciSI	GCTCTTC	1 cut(s)	815
PcsI	WCGNNNNNNNCGW	3 cut(s)	96, 1049, 1250
PdiI	GCCGGC	2 cut(s)	316, 589
PdmI	GAANNNNTTC	2 cut(s)	755, 824
PfeI	GAWTC	6 cut(s)	943, 1040, 1063, 1142, 1339, 1630
PflFI	GACNNNGTC	1 cut(s)	1171
PkrI	GCNGC	9 cut(s)	209, 284, 644, 702, 705, 735, 785, 1139, 1214
Psp6I	CCWGG	2 cut(s)	423, 1267
PspFI	CCCAGC	1 cut(s)	1394
PspGI	CCWGG	2 cut(s)	423, 1267
PspN4I	GGNNCC	7 cut(s)	94, 319, 366, 481, 609, 1294, 1295
PspOMI	GGGCCC	1 cut(s)	1293
PspPI	GGNCC	7 cut(s)	427, 688, 698, 841, 873, 1293, 1294
PspXI	VCTCGAGB	1 cut(s)	680
PsyI	GACNNNGTC	1 cut(s)	1171
RsaI	GTAC	3 cut(s)	599, 790, 1657
RsaNI	GTAC	3 cut(s)	598, 789, 1656
RseI	CAYNNNNRTG	1 cut(s)	464
SalI	GTCGAC	1 cut(s)	275
SapI	GCTCTTC	1 cut(s)	815
SatI	GCNGC	9 cut(s)	208, 283, 643, 701, 704, 734, 784, 1138, 1213
Sau3AI	GATC	5 cut(s)	87, 669, 744, 853, 1105
Sau96I	GGNCC	7 cut(s)	427, 688, 698, 841, 873, 1293, 1294
ScaI	AGTACT	1 cut(s)	1657
ScrFI	CCNGG	2 cut(s)	425, 1269
SduI	GDGCHC	4 cut(s)	369, 528, 624, 1297
SexAI	ACCWGGT	1 cut(s)	1267
SfaNI	GCATC	2 cut(s)	721, 1509
Sfr274I	CTCGAG	1 cut(s)	680
SlaI	CTCGAG	1 cut(s)	680
SmiMI	CAYNNNNRTG	1 cut(s)	464
SmlI	CTYRAG	2 cut(s)	386, 680
SmoI	CTYRAG	2 cut(s)	386, 680
SpeI	ACTAGT	1 cut(s)	1658
Sse9I	AATT	3 cut(s)	1071, 1084, 1594
SspMI	CTAG	3 cut(s)	491, 963, 1659
StyD4I	CCNGG	2 cut(s)	423, 1267
StyI	CCWWGG	1 cut(s)	1416
TaaI	ACNGT	2 cut(s)	274, 917
TaiI	ACGT	2 cut(s)	563, 585
TaqI	TCGA	9 cut(s)	29, 168, 174, 195, 276, 681, 725, 818, 1337
TaqII	GACCGA	2 cut(s)	505, 1184
TasI	AATT	3 cut(s)	1071, 1084, 1594
TatI	WGTACW	1 cut(s)	1655
TauI	GCSGC	6 cut(s)	210, 285, 703, 706, 786, 1215
TfiI	GAWTC	6 cut(s)	943, 1040, 1063, 1142, 1339, 1630
TscAI	CASTG	2 cut(s)	266, 1164
TseFI	GTSAC	1 cut(s)	1474
TseI	GCWGC	3 cut(s)	642, 733, 1137
Tsp45I	GTSAC	1 cut(s)	1474
TspDTI	ATGAA	3 cut(s)	295, 1035, 1053
TspGWI	ACGGA	4 cut(s)	124, 319, 472, 806
TspRI	CASTG	2 cut(s)	266, 1164
Tth111I	GACNNNGTC	1 cut(s)	1171
VneI	GTGCAC	1 cut(s)	620
XapI	RAATTY	2 cut(s)	1084, 1594
XceI	RCATGY	1 cut(s)	361
XhoI	CTCGAG	1 cut(s)	680
XmiI	GTMKAC	3 cut(s)	114, 276, 519
XmnI	GAANNNNTTC	2 cut(s)	755, 824
XspI	CTAG	3 cut(s)	491, 963, 1659
ZraI	GACGTC	1 cut(s)	583
ZrmI	AGTACT	1 cut(s)	1657

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.