Prupe.1G031800_v2.0.a1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
2246045 .. 2247361
1317 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G031800.1

Sequence Viewer

Length: 1317 bp
ATGTCGACTTCTTCTTCTCACCAAGAAAACCCTGAACCCAAGAAAGTCCAATTCCCATTGGACTCAACTGCGTACCAAATCCTCGATGAAATTGGCTTCGGCGTCAGCGCTGTTGTTTACAAAGCCATCTGTTTGCCGATGAACAACACAATCGTGGCAATCAAGTCCATCGATCTCGATCAATCCCGGGCCGATTTCGACAACATTCTAAGTGAAACCAAGACGCTCTCTCTTCTTTCACACCCCAATATCCTCAGCGCCTATTGTTCTTTCACTGTGGACCGTCATCTTTGGGTCGTCATGCCGTTCATGTCCGCCGGGTCTCTCCAATCCATAATCTCCTCTGCTTTCCCTGACGGCCTACCTGAGCCCTGCATTGCCGTCGTCCTCAGGGAGACACTGAACGCCATGTCGTACCTTCATGACCAAGGGCACCTTCACAGAGACATCAAGGCTGGTAATATCTTGATTGACTTCAATGGGTGGGTTAAAGTTGCAGACTTTGGGGTTTCTGCATCTGTTTCTGAGGCCAATTTGAGTGGAGAGTCTTCGATTCGGTTAAACGACGTTGCTGGGACGCCTTATTGGATAGCGCCTGAGGTGATACACTCGCACAACGGCTACGGATGCAAGGCGGATGTATGGTCTTTTGGTATCACAGCTCTGGAATTGGCTCATGGGGGGCCTCCTCTGTCTGACTTGCCTCCTTCAAAGTCTCTGCTTTTGAAGATCATGAAGAGGTTCCGCTTTTCGGATTATGAAAATCATCAGGACAAGAATTACAAGAGCAAGAAGTTCTCTAAGGCCTTTAAGGACTTGGTGGGTTGTTGTCTTGATCAAGACCCGAACAAGAGGCCCACTGCGGAGAGGTTGCTGAGGCACTCGTTTTTCAAGAATTGCAAGGGCTTGGATTTTCTGGTAAAGAATGTGCTTCTGGGTTTGCCCAGCGTTGAGGAAAGGTTCAAGAAAACCCGGGGTTTGGGTGGGCTGATGAAGGAGAAGGGTATTAATGCTGAGCATGGTGAGGATGAAGAGGAAGATGATGAAGGTAGCTCAGCGAGGCAGAGGGCTAAGCACAGAAGGATTAGTAGTGGGTGGAATTTCAATGAGGATGAGTTTGTTCTCGACCCTGTGTTCCCAGTTGAGCCTGAAGACGATTCTGCTGTGAAAATGGTTCGGTTTGGTGGAGAAACCATCATCCAGGATAGGGGAGGTGAGTGGAGTGAGTCGAATCCGAGTTCACCGGGTCGGGTTGGGGAGGAGGCCAAGAGTGAGAATGTGGGTGTGATAGGAGCTGAGAGGGAAGCAATGGCGGTG

Protein Analysis

439

Amino Acids

48.5

Weight (kDa)

5.46

Isoelectric Point (pI)

45.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 432
AccI GTMKAC 1 cut(s) 5
AciI CCGC 5 cut(s) 315, 635, 745, 863, 1313
AcsI RAATTY 1 cut(s) 1099
AcuI CTGAAG 1 cut(s) 1170
AcyI GRCGYC 2 cut(s) 102, 578
AfaI GTAC 2 cut(s) 74, 416
AfeI AGCGCT 1 cut(s) 109
AfiI CCNNNNNNNGG 3 cut(s) 751, 979, 1207
AgsI TTSAA 6 cut(s) 478, 711, 727, 892, 964, 1105
AjnI CCWGG 1 cut(s) 1200
AjuI GAANNNNNNNTTGG 2 cut(s) 420, 452
AleI CACNNNNGTG 1 cut(s) 152
AluBI AGCT 3 cut(s) 662, 1053, 1295
AluI AGCT 3 cut(s) 662, 1053, 1295
Alw26I GTCTC 4 cut(s) 327, 389, 438, 720
Ama87I CYCGRG 2 cut(s) 186, 972
Aor51HI AGCGCT 1 cut(s) 109
AoxI GGCC 7 cut(s) 189, 358, 528, 683, 804, 854, 1263
ApoI RAATTY 1 cut(s) 1099
AseI ATTAAT 1 cut(s) 1008
Asp700I GAANNNNTTC 1 cut(s) 740
AspLEI GCGC 3 cut(s) 110, 260, 595
AspS9I GGNCC 4 cut(s) 189, 280, 683, 855
AsuC2I CCSGG 6 cut(s) 187, 188, 319, 973, 974, 1245
AsuHPI GGTGA 5 cut(s) 11, 613, 1034, 1226, 1233
AvaI CYCGRG 2 cut(s) 186, 972
AvaII GGWCC 1 cut(s) 280
AxyI CCTNAGG 2 cut(s) 389, 597
BaeGI GKGCMC 1 cut(s) 435
BanI GGYRCC 1 cut(s) 432
BanII GRGCYC 1 cut(s) 372
BbsI GAAGAC 2 cut(s) 540, 1158
BbvCI CCTCAGC 2 cut(s) 254, 875
BccI CCATC 3 cut(s) 134, 176, 1202
BceAI ACGGC 4 cut(s) 289, 365, 373, 634
BcgI CGANNNNNNTGC 2 cut(s) 364, 398
BciT130I CCWGG 1 cut(s) 1202
BclI TGATCA 1 cut(s) 835
BcnI CCSGG 6 cut(s) 187, 188, 319, 973, 974, 1245
BcoDI GTCTC 4 cut(s) 327, 389, 438, 720
BfoI RGCGCY 3 cut(s) 111, 261, 596
BlpI GCTNAGC 3 cut(s) 1014, 1054, 1071
Bme1390I CCNGG 7 cut(s) 187, 188, 319, 973, 974, 1202, 1245
Bme18I GGWCC 1 cut(s) 280
BmeT110I CYCGRG 2 cut(s) 186, 972
BmgT120I GGNCC 4 cut(s) 189, 280, 683, 855
BmiI GGNNCC 3 cut(s) 434, 684, 743
BmrFI CCNGG 7 cut(s) 187, 188, 319, 973, 974, 1202, 1245
BmrI ACTGGG 1 cut(s) 1133
BmsI GCATC 2 cut(s) 524, 617
BmuI ACTGGG 1 cut(s) 1133
BpiI GAAGAC 2 cut(s) 540, 1158
Bpu10I CCTNAGC 3 cut(s) 254, 366, 875
Bpu1102I GCTNAGC 3 cut(s) 1014, 1054, 1071
BpuMI CCSGG 6 cut(s) 187, 188, 319, 973, 974, 1245
Bsa29I ATCGAT 1 cut(s) 171
BsaBI GATNNNNATC 1 cut(s) 177
BsaHI GRCGYC 2 cut(s) 102, 578
BsaI GGTCTC 1 cut(s) 327
BsaJI CCNNGG 4 cut(s) 186, 427, 972, 973
Bsc4I CCNNNNNNNGG 3 cut(s) 751, 979, 1207
Bse1I ACTGG 1 cut(s) 1139
Bse21I CCTNAGG 2 cut(s) 389, 597
Bse3DI GCAATG 2 cut(s) 375, 1314
Bse8I GATNNNNATC 1 cut(s) 177
BseBI CCWGG 1 cut(s) 1202
BseCI ATCGAT 1 cut(s) 171
BseDI CCNNGG 4 cut(s) 186, 427, 972, 973
BseGI GGATG 5 cut(s) 632, 643, 1033, 1117, 1197
BseJI GATNNNNATC 1 cut(s) 177
BseLI CCNNNNNNNGG 3 cut(s) 751, 979, 1207
BseMI GCAATG 2 cut(s) 375, 1314
BseMII CTCAG 9 cut(s) 268, 357, 403, 516, 588, 866, 1005, 1068, 1287
BseNI ACTGG 1 cut(s) 1139
BseRI GAGGAG 3 cut(s) 331, 678, 1274
BseSI GKGCMC 1 cut(s) 435
BseYI CCCAGC 2 cut(s) 572, 944
BshFI GGCC 7 cut(s) 191, 360, 530, 685, 806, 856, 1265
BshNI GGYRCC 1 cut(s) 432
BshVI ATCGAT 1 cut(s) 171
BsiHKCI CYCGRG 2 cut(s) 186, 972
BsiSI CCGG 4 cut(s) 187, 318, 973, 1244
BslFI GGGAC 1 cut(s) 589
BslI CCNNNNNNNGG 3 cut(s) 751, 979, 1207
BsmAI GTCTC 4 cut(s) 327, 389, 438, 720
BsmFI GGGAC 1 cut(s) 589
BsnI GGCC 7 cut(s) 191, 360, 530, 685, 806, 856, 1265
Bso31I GGTCTC 1 cut(s) 327
BsoBI CYCGRG 2 cut(s) 186, 972
Bsp1286I GDGCHC 2 cut(s) 372, 435
Bsp143I GATC 4 cut(s) 172, 178, 729, 835
Bsp1720I GCTNAGC 3 cut(s) 1014, 1054, 1071
BspACI CCGC 5 cut(s) 315, 635, 745, 863, 1313
BspANI GGCC 7 cut(s) 191, 360, 530, 685, 806, 856, 1265
BspCNI CTCAG 9 cut(s) 267, 358, 402, 517, 589, 867, 1006, 1067, 1288
BspDI ATCGAT 1 cut(s) 171
BspHI TCATGA 2 cut(s) 421, 732
BspLI GGNNCC 3 cut(s) 434, 684, 743
BspT107I GGYRCC 1 cut(s) 432
BspTNI GGTCTC 1 cut(s) 327
BsrDI GCAATG 2 cut(s) 375, 1314
BsrI ACTGG 1 cut(s) 1139
BssECI CCNNGG 4 cut(s) 186, 427, 972, 973
BssMI GATC 4 cut(s) 172, 178, 729, 835
BssNI GRCGYC 2 cut(s) 102, 578
BssT1I CCWWGG 1 cut(s) 427
Bst2UI CCWGG 1 cut(s) 1202
Bst4CI ACNGT 2 cut(s) 277, 284
Bst6I CTCTTC 3 cut(s) 237, 731, 1026
BstACI GRCGYC 2 cut(s) 102, 578
BstF5I GGATG 5 cut(s) 632, 643, 1033, 1117, 1197
BstH2I RGCGCY 3 cut(s) 111, 261, 596
BstHHI GCGC 3 cut(s) 110, 260, 595
BstKTI GATC 4 cut(s) 175, 181, 732, 838
BstMAI GTCTC 4 cut(s) 327, 389, 438, 720
BstMBI GATC 4 cut(s) 172, 178, 729, 835
BstMWI GCNNNNNNNGC 1 cut(s) 627
BstNI CCWGG 1 cut(s) 1202
BstSCI CCNGG 7 cut(s) 185, 186, 317, 971, 972, 1200, 1243
BstSLI GKGCMC 1 cut(s) 435
BstV2I GAAGAC 2 cut(s) 540, 1158
Bsu15I ATCGAT 1 cut(s) 171
Bsu36I CCTNAGG 2 cut(s) 389, 597
BsuRI GGCC 7 cut(s) 191, 360, 530, 685, 806, 856, 1265
BsuTUI ATCGAT 1 cut(s) 171
BtsCI GGATG 5 cut(s) 632, 643, 1033, 1117, 1197
BtsI GCAGTG 1 cut(s) 858
BtsIMutI CAGTG 3 cut(s) 273, 398, 858
CciI TCATGA 2 cut(s) 421, 732
CfoI GCGC 3 cut(s) 110, 260, 595
Cfr13I GGNCC 4 cut(s) 189, 280, 683, 855
Cfr9I CCCGGG 2 cut(s) 186, 972
ClaI ATCGAT 1 cut(s) 171
CseI GACGC 3 cut(s) 91, 232, 586
Csp6I GTAC 2 cut(s) 73, 415
CspCI CAANNNNNGTGG 2 cut(s) 520, 555
CviAII CATG 7 cut(s) 301, 310, 409, 422, 677, 733, 1019
CviQI GTAC 2 cut(s) 73, 415
DpnI GATC 4 cut(s) 174, 180, 731, 837
DpnII GATC 4 cut(s) 172, 178, 729, 835
Eam1104I CTCTTC 3 cut(s) 237, 731, 1026
EarI CTCTTC 3 cut(s) 237, 731, 1026
EciI GGCGGA 2 cut(s) 304, 650
Eco130I CCWWGG 1 cut(s) 427
Eco147I AGGCCT 1 cut(s) 806
Eco24I GRGCYC 1 cut(s) 372
Eco31I GGTCTC 1 cut(s) 327
Eco47I GGWCC 1 cut(s) 280
Eco47III AGCGCT 1 cut(s) 109
Eco57I CTGAAG 1 cut(s) 1170
Eco81I CCTNAGG 2 cut(s) 389, 597
Eco88I CYCGRG 2 cut(s) 186, 972
EcoO109I RGGNCCY 1 cut(s) 683
EcoRII CCWGG 1 cut(s) 1200
EcoT14I CCWWGG 1 cut(s) 427
EcoT38I GRGCYC 1 cut(s) 372
ErhI CCWWGG 1 cut(s) 427
FaeI CATG 7 cut(s) 304, 313, 412, 425, 680, 736, 1022
FalI AAGNNNNNCTT 2 cut(s) 420, 452
FaqI GGGAC 1 cut(s) 589
FatI CATG 7 cut(s) 300, 309, 408, 421, 676, 732, 1018
FbaI TGATCA 1 cut(s) 835
FblI GTMKAC 1 cut(s) 5
FokI GGATG 5 cut(s) 639, 650, 1040, 1124, 1184
FriOI GRGCYC 1 cut(s) 372
GlaI GCGC 3 cut(s) 109, 259, 594
GsaI CCCAGC 2 cut(s) 576, 948
HaeII RGCGCY 3 cut(s) 111, 261, 596
HaeIII GGCC 7 cut(s) 191, 360, 530, 685, 806, 856, 1265
HapII CCGG 4 cut(s) 187, 318, 973, 1244
HgaI GACGC 3 cut(s) 91, 232, 586
HhaI GCGC 3 cut(s) 110, 260, 595
Hin1I GRCGYC 2 cut(s) 102, 578
Hin1II CATG 7 cut(s) 304, 313, 412, 425, 680, 736, 1022
Hin6I GCGC 3 cut(s) 108, 258, 593
HinP1I GCGC 3 cut(s) 108, 258, 593
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HinfI GANTC 6 cut(s) 62, 545, 553, 1157, 1226, 1231
HpaII CCGG 4 cut(s) 187, 318, 973, 1244
HphI GGTGA 5 cut(s) 11, 613, 1034, 1226, 1233
Hpy166II GTNNAC 4 cut(s) 6, 118, 280, 1241
Hpy188I TCNGA 4 cut(s) 526, 697, 754, 1236
Hpy8I GTNNAC 4 cut(s) 6, 118, 280, 1241
Hpy99I CGWCG 2 cut(s) 386, 569
HpyAV CCTTC 7 cut(s) 428, 446, 717, 988, 994, 1040, 1074
HpyCH4III ACNGT 2 cut(s) 277, 284
HpyCH4IV ACGT 1 cut(s) 567
HpyCH4V TGCA 5 cut(s) 375, 497, 515, 630, 900
HpyF10VI GCNNNNNNNGC 1 cut(s) 627
HpySE526I ACGT 1 cut(s) 567
Hsp92I GRCGYC 2 cut(s) 102, 578
Hsp92II CATG 7 cut(s) 304, 313, 412, 425, 680, 736, 1022
HspAI GCGC 3 cut(s) 108, 258, 593
Ksp22I TGATCA 1 cut(s) 835
Kzo9I GATC 4 cut(s) 172, 178, 729, 835
LmnI GCTCC 1 cut(s) 1292
LweI GCATC 2 cut(s) 524, 617
MaeII ACGT 1 cut(s) 567
MalI GATC 4 cut(s) 174, 180, 731, 837
MboI GATC 4 cut(s) 172, 178, 729, 835
MboII GAAGA 9 cut(s) 3, 6, 224, 540, 739, 748, 1043, 1049, 1163
MhlI GDGCHC 2 cut(s) 372, 435
MluCI AATT 7 cut(s) 50, 90, 532, 668, 778, 895, 1099
MlyI GAGTC 3 cut(s) 56, 554, 1235
MroXI GAANNNNTTC 1 cut(s) 740
MseI TTAA 4 cut(s) 489, 560, 810, 1008
MslI CAYNNNNRTG 1 cut(s) 152
MspI CCGG 4 cut(s) 187, 318, 973, 1244
MspR9I CCNGG 7 cut(s) 187, 188, 319, 973, 974, 1202, 1245
MvaI CCWGG 1 cut(s) 1202
MwoI GCNNNNNNNGC 1 cut(s) 627
NciI CCSGG 6 cut(s) 187, 188, 319, 973, 974, 1245
NdeII GATC 4 cut(s) 172, 178, 729, 835
NlaIII CATG 7 cut(s) 304, 313, 412, 425, 680, 736, 1022
NlaIV GGNNCC 3 cut(s) 434, 684, 743
OliI CACNNNNGTG 1 cut(s) 152
PagI TCATGA 2 cut(s) 421, 732
PceI AGGCCT 1 cut(s) 806
PdmI GAANNNNTTC 1 cut(s) 740
PfeI GAWTC 3 cut(s) 553, 1157, 1231
PfoI TCCNGGA 1 cut(s) 1200
PleI GAGTC 3 cut(s) 56, 553, 1234
PpsI GAGTC 3 cut(s) 56, 553, 1234
PshBI ATTAAT 1 cut(s) 1008
Psp6I CCWGG 1 cut(s) 1200
PspFI CCCAGC 2 cut(s) 572, 944
PspGI CCWGG 1 cut(s) 1200
PspN4I GGNNCC 3 cut(s) 434, 684, 743
PspPI GGNCC 4 cut(s) 189, 280, 683, 855
RsaI GTAC 2 cut(s) 74, 416
RsaNI GTAC 2 cut(s) 73, 415
RseI CAYNNNNRTG 1 cut(s) 152
SalI GTCGAC 1 cut(s) 4
SaqAI TTAA 4 cut(s) 489, 560, 810, 1008
Sau3AI GATC 4 cut(s) 172, 178, 729, 835
Sau96I GGNCC 4 cut(s) 189, 280, 683, 855
SchI GAGTC 3 cut(s) 56, 554, 1235
ScrFI CCNGG 7 cut(s) 187, 188, 319, 973, 974, 1202, 1245
SduI GDGCHC 2 cut(s) 372, 435
SfaNI GCATC 2 cut(s) 524, 617
SinI GGWCC 1 cut(s) 280
SmaI CCCGGG 2 cut(s) 188, 974
SmiMI CAYNNNNRTG 1 cut(s) 152
Sse9I AATT 7 cut(s) 50, 90, 532, 668, 778, 895, 1099
SseBI AGGCCT 1 cut(s) 806
SsiI CCGC 5 cut(s) 315, 635, 745, 863, 1313
StuI AGGCCT 1 cut(s) 806
StyD4I CCNGG 7 cut(s) 185, 186, 317, 971, 972, 1200, 1243
StyI CCWWGG 1 cut(s) 427
TaaI ACNGT 2 cut(s) 277, 284
TaiI ACGT 1 cut(s) 570
TaqI TCGA 8 cut(s) 5, 84, 171, 177, 198, 551, 1125, 1229
TasI AATT 7 cut(s) 50, 90, 532, 668, 778, 895, 1099
TfiI GAWTC 3 cut(s) 553, 1157, 1231
Tru1I TTAA 4 cut(s) 489, 560, 810, 1008
Tru9I TTAA 4 cut(s) 489, 560, 810, 1008
TscAI CASTG 3 cut(s) 280, 405, 865
TspDTI ATGAA 9 cut(s) 102, 155, 298, 410, 749, 774, 1007, 1044, 1059
TspGWI ACGGA 1 cut(s) 639
TspMI CCCGGG 2 cut(s) 186, 972
TspRI CASTG 3 cut(s) 280, 405, 865
VpaK11BI GGWCC 1 cut(s) 280
VspI ATTAAT 1 cut(s) 1008
XapI RAATTY 1 cut(s) 1099
XmaI CCCGGG 2 cut(s) 186, 972
XmiI GTMKAC 1 cut(s) 5
XmnI GAANNNNTTC 1 cut(s) 740
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.