Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0005157

Physical Location & Seq

Genomic Coordinates Forward (+)

4914484 .. 4916166

Gene Structure 1683 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00336980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGGCGGTTCATCACGAAGAACCCACATCGACTTCAAGAAAGCTCCACTTCCCTCTTGACTCCTCCGCCTACCAAATCCTAGGCGAGATCGGCTCCGGCGTCAGCGCCGTCGTGTACAAAGCCCTATGCCCCTCCGTCAACTCTGCCATGGTCGCCATCAAGTCCATCGACCTCGACCGCTCCCGCTCCGACTTCGACGCCTTCCGCCGTGAGACCAAAACGATGTCGCTTCTCTCCCACCCCAACATCCTCTCCGCCCACTGCTCCTTCACCGTCGACCGCCGCCTCTGGGTCGTCATGCCCTTCATGTCCGCCGGCTCCATCCAGTCCGTCATCTCCTCCTCCTTCCCAAACGGCATGTCGGAGCCCTGCATTGCCGTCATCCTCAAGGAAACCCTAAACGCCTTGTCGTATCTCCACGACCAGGGCCACCTCCACCGCGACATCAAGGCCAGCAACATCCTCATGGACTCCGACGGCTCCGTAAAGCTCGCCGACTTCGGCGTCTCCGCCTCGGTCTACGAGCCCAACTACCTCAACTCCAACACCGCCTCCAAAACGTCGTCGTTTCGCCTCACCGACGTCGCCGGCACGCCGTACTGGATGGCTCCGGAAGTCGTGCACTCGCACAACGGCTACGGCTGCAAAGCCGACATCTGGTCTCTCGGGATCACCGCCCTCGAGCTGGCCCACGGCGGGCCGCCGCTGTCGCATCTCCCTCCGTCGAAGTCGCTGCTTCTGCGGATCACGAAGCGGTTCAACTTCTCGGACTACGAGACGCGAGGCGGTACGGACAAGAACAAGAGCAAGAAGTTCTCGAAGAGTTTCAAGGACTTGGTGGGCCTGTGTTTGGACCAGGACCCGAACAAGAGGCCCAGCGCCGAGAAACTTCTGAAGCACTCGTTTTTCAAGAACTGTAAAGGGGTTGATTTCCTGGCCAAGAATCTGCTGAATGGGCTGCCTAGTGTGGAAGAGAGGTTTAGGGTTTTGGGTGGCGTGTTGAGCAAGAGTGAGGAAGATGAAGATGATGATGATGATGATGAATCGGCGAGGGCGAGGGTAAGGAATCGGAGAATTAGTGGGTGGAATTTCAATGAGGATGGGCTTGATCTCCACCCAGTATTCCCAACCGAGTCGGGCAGCGATTCAGGTGGCAACTCAGTGTTTCTGACCGAGTCAAGCAGCGAGTCCGTTGGCAAGATGGTTCGGTTCAGCGGCGAAACTATCATTAGGTTGTCAAGTGAGTCGCACGAGTCGTATCTGAGTTCACCAGGTCGTGTTGTGGAGGAGGAGGGGCCCCATTTGGTGAGAGGAGATGAGTCAGGAGAGTCAATGGAGTCGAATCTGAGTTCACTTGTGGGTGTGCAGAGTCGGTATGGGGGTGTGGATAGTAATGCTGGGGGTGTTGATAGGGAGGCCATGGTGAGTGGGCTGACGGTGTTTATGAGGAGTTTGGATGAGCAGAGGAGCAATGTGGTGACTCTGATTGGTCTGTTGCGTGGGGAGGAAATTGGGGAGGCGATGCTGAGCAGAGAGGAGCAGATGGGTCAAGTGATTGAGAGGATGAGAGTGGAGTTGGAAAATGAGAGGGAGAGGAATTTTCAGTTGGAGATGGAGTTGGAGTTTCTAAGGATTCAGATTTCTGGGGCTTACACAACTACTAGTGCTGGTAGTATTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010119 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902456

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

560

Amino Acids

61.6

Weight (kDa)

5.39

Isoelectric Point (pI)

46.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	24 - 303	3.2e-59	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	27 - 299	4.1e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005157)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14480
fragaria_vesca	FvH4_4g03000
malus_domestica	MD01G1106400.v1.1 MD01G1106800.v1.1 MD02G1095900.v1.1 MD04G1063400.v1.1 MD04G1063500.v1.1 MD07G1020600.v1.1 MD07G1020800.v1.1 MD16G1212100.v1.1
prunus_persica	Prupe.1G031800_v2.0.a1 Prupe.1G033800_v2.0.a1 Prupe.1G034000_v2.0.a1 Prupe.4G193100_v2.0.a1
pyrus_communis	pycom01g13320 pycom01g13330 pycom01g13350 pycom07g01600 pycom16g17810
rosa_chinensis	RchiOBHm_Chr4g0391181
rosa_laevigata	RLG00000009879
rosa_multiflora	Rmu_co8201760.1_g000001 Rmu_sc0000040.1_g000009
rosa_roxburghii	Rroxscaffold_5G00336980
rosa_rugosa	Rorug03G0334900
rosa_samantha	Rh4AG035700 Rh4BG030700 Rh4CG039000 Rh4DG033200
rosa_wichuraiana	Rw4G002800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	503
AatII	GACGTC	1 cut(s)	585
AccBSI	CCGCTC	2 cut(s)	180, 186
AccI	GTMKAC	2 cut(s)	276, 519
AccII	CGCG	2 cut(s)	441, 781
AccIII	TCCGGA	1 cut(s)	610
AclWI	GGATC	2 cut(s)	677, 752
AcoI	YGGCCR	1 cut(s)	936
AcsI	RAATTY	2 cut(s)	1087, 1597
AcuI	CTGAAG	1 cut(s)	914
AcyI	GRCGYC	4 cut(s)	99, 198, 504, 582
AfaI	GTAC	3 cut(s)	116, 599, 790
AfiI	CCNNNNNNNGG	6 cut(s)	289, 424, 657, 685, 696, 850
AgsI	TTSAA	5 cut(s)	36, 760, 829, 910, 1093
AhdI	GACNNNNNGTC	1 cut(s)	658
AhlI	ACTAGT	1 cut(s)	1661
AjnI	CCWGG	4 cut(s)	423, 855, 933, 1270
AjuI	GAANNNNNNNTTGG	2 cut(s)	1589, 1621
AluBI	AGCT	3 cut(s)	43, 490, 685
AluI	AGCT	3 cut(s)	43, 490, 685
Alw21I	GWGCWC	1 cut(s)	624
Alw26I	GTCTC	4 cut(s)	206, 511, 666, 770
Alw44I	GTGCAC	1 cut(s)	620
AlwI	GGATC	2 cut(s)	677, 752
Ama87I	CYCGRG	2 cut(s)	665, 680
Aor13HI	TCCGGA	1 cut(s)	610
AoxI	GGCC	9 cut(s)	427, 450, 687, 698, 841, 872, 936, 1295, 1416
ApaI	GGGCCC	1 cut(s)	1299
ApaLI	GTGCAC	1 cut(s)	620
ApeKI	GCWGC	5 cut(s)	642, 733, 958, 1140, 1182
ApoI	RAATTY	2 cut(s)	1087, 1597
ArsI	GACNNNNNNTTYG	2 cut(s)	344, 376
Asp700I	GAANNNNTTC	2 cut(s)	755, 824
AspA2I	CCTAGG	1 cut(s)	79
AspLEI	GCGC	2 cut(s)	107, 881
AspS9I	GGNCC	9 cut(s)	427, 688, 698, 841, 853, 859, 873, 1295, 1296
AsuHPI	GGTGA	7 cut(s)	262, 568, 664, 1260, 1318, 1435, 1489
AvaI	CYCGRG	2 cut(s)	665, 680
AvaII	GGWCC	2 cut(s)	853, 859
AvrII	CCTAGG	1 cut(s)	79
BaeGI	GKGCMC	2 cut(s)	624, 1299
BalI	TGGCCA	1 cut(s)	938
BanII	GRGCYC	3 cut(s)	369, 528, 1299
BauI	CACGAG	1 cut(s)	1250
Bbv12I	GWGCWC	1 cut(s)	624
BbvI	GCAGC	5 cut(s)	629, 720, 945, 1152, 1194
BccI	CCATC	8 cut(s)	164, 173, 329, 598, 1094, 1195, 1537, 1606
BceAI	ACGGC	9 cut(s)	92, 192, 362, 370, 493, 580, 649, 655, 709
BcgI	CGANNNNNNTGC	2 cut(s)	715, 749
BciT130I	CCWGG	4 cut(s)	425, 857, 935, 1272
BcoDI	GTCTC	4 cut(s)	206, 511, 666, 770
BcuI	ACTAGT	1 cut(s)	1661
BfaI	CTAG	3 cut(s)	80, 963, 1662
BfoI	RGCGCY	2 cut(s)	108, 882
BisI	GCNGC	9 cut(s)	283, 643, 701, 704, 734, 959, 1141, 1183, 1216
BlnI	CCTAGG	1 cut(s)	79
BlpI	GCTNAGC	1 cut(s)	1526
BlsI	GCNGC	9 cut(s)	284, 644, 702, 705, 735, 960, 1142, 1184, 1217
Bme1390I	CCNGG	4 cut(s)	425, 857, 935, 1272
Bme18I	GGWCC	2 cut(s)	853, 859
BmeRI	GACNNNNNGTC	1 cut(s)	658
BmeT110I	CYCGRG	2 cut(s)	665, 680
BmgT120I	GGNCC	9 cut(s)	427, 688, 698, 841, 853, 859, 873, 1295, 1296
BmiI	GGNNCC	9 cut(s)	94, 319, 366, 481, 609, 861, 1296, 1297, 1298
BmrFI	CCNGG	4 cut(s)	425, 857, 935, 1272
BmrI	ACTGGG	1 cut(s)	1112
BmsI	GCATC	2 cut(s)	721, 1512
BmuI	ACTGGG	1 cut(s)	1112
BplI	GAGNNNNNCTC	2 cut(s)	77, 109
Bpu1102I	GCTNAGC	1 cut(s)	1526
BpuEI	CTTGAG	1 cut(s)	371
BsaHI	GRCGYC	4 cut(s)	99, 198, 504, 582
BsaI	GGTCTC	2 cut(s)	206, 666
BsaJI	CCNNGG	6 cut(s)	79, 147, 424, 513, 691, 1419
BsaWI	WCCGGW	1 cut(s)	610
Bsc4I	CCNNNNNNNGG	6 cut(s)	289, 424, 657, 685, 696, 850
Bse118I	RCCGGY	2 cut(s)	314, 587
Bse1I	ACTGG	3 cut(s)	325, 605, 1118
Bse3DI	GCAATG	2 cut(s)	372, 1477
BseAI	TCCGGA	1 cut(s)	610
BseBI	CCWGG	4 cut(s)	425, 857, 935, 1272
BseDI	CCNNGG	6 cut(s)	79, 147, 424, 513, 691, 1419
BseGI	GGATG	8 cut(s)	246, 321, 381, 459, 609, 1105, 1462, 1569
BseLI	CCNNNNNNNGG	6 cut(s)	289, 424, 657, 685, 696, 850
BseMI	GCAATG	2 cut(s)	372, 1477
BseMII	CTCAG	4 cut(s)	1173, 1253, 1337, 1517
BseNI	ACTGG	3 cut(s)	325, 605, 1118
BseRI	GAGGAG	9 cut(s)	52, 328, 331, 1301, 1304, 1326, 1462, 1480, 1550
BseSI	GKGCMC	2 cut(s)	624, 1299
BseXI	GCAGC	5 cut(s)	629, 720, 945, 1152, 1194
BseYI	CCCAGC	2 cut(s)	875, 1397
BsgI	GTGCAG	1 cut(s)	1385
Bsh1236I	CGCG	2 cut(s)	441, 781
Bsh1285I	CGRYCG	2 cut(s)	178, 280
BshFI	GGCC	9 cut(s)	429, 452, 689, 700, 843, 874, 938, 1297, 1418
BsiEI	CGRYCG	2 cut(s)	178, 280
BsiHKAI	GWGCWC	1 cut(s)	624
BsiHKCI	CYCGRG	2 cut(s)	665, 680
BsiSI	CCGG	4 cut(s)	96, 315, 588, 611
BslI	CCNNNNNNNGG	6 cut(s)	289, 424, 657, 685, 696, 850
BsmAI	GTCTC	4 cut(s)	206, 511, 666, 770
BsmBI	CGTCTC	2 cut(s)	511, 770
BsnI	GGCC	9 cut(s)	429, 452, 689, 700, 843, 874, 938, 1297, 1418
Bso31I	GGTCTC	2 cut(s)	206, 666
BsoBI	CYCGRG	2 cut(s)	665, 680
Bsp120I	GGGCCC	1 cut(s)	1295
Bsp1286I	GDGCHC	4 cut(s)	369, 528, 624, 1299
Bsp13I	TCCGGA	1 cut(s)	610
Bsp1407I	TGTACA	1 cut(s)	114
Bsp143I	GATC	4 cut(s)	87, 669, 744, 1108
Bsp1720I	GCTNAGC	1 cut(s)	1526
Bsp19I	CCATGG	2 cut(s)	147, 1419
BspANI	GGCC	9 cut(s)	429, 452, 689, 700, 843, 874, 938, 1297, 1418
BspCNI	CTCAG	4 cut(s)	1172, 1254, 1338, 1518
BspEI	TCCGGA	1 cut(s)	610
BspFNI	CGCG	2 cut(s)	441, 781
BspLI	GGNNCC	9 cut(s)	94, 319, 366, 481, 609, 861, 1296, 1297, 1298
BspPI	GGATC	2 cut(s)	677, 752
BspTNI	GGTCTC	2 cut(s)	206, 666
BsrBI	CCGCTC	2 cut(s)	180, 186
BsrDI	GCAATG	2 cut(s)	372, 1477
BsrFI	RCCGGY	2 cut(s)	314, 587
BsrGI	TGTACA	1 cut(s)	114
BsrI	ACTGG	3 cut(s)	325, 605, 1118
BssAI	RCCGGY	2 cut(s)	314, 587
BssECI	CCNNGG	6 cut(s)	79, 147, 424, 513, 691, 1419
BssMI	GATC	4 cut(s)	87, 669, 744, 1108
BssNI	GRCGYC	4 cut(s)	99, 198, 504, 582
BssSI	CACGAG	1 cut(s)	1250
BssT1I	CCWWGG	3 cut(s)	79, 147, 1419
Bst2BI	CACGAG	1 cut(s)	1250
Bst2UI	CCWGG	4 cut(s)	425, 857, 935, 1272
Bst4CI	ACNGT	3 cut(s)	274, 917, 1438
Bst6I	CTCTTC	2 cut(s)	815, 966
BstACI	GRCGYC	4 cut(s)	99, 198, 504, 582
BstAUI	TGTACA	1 cut(s)	114
BstC8I	GCNNGC	7 cut(s)	316, 454, 492, 589, 593, 687, 698
BstDEI	CTNAG	5 cut(s)	1159, 1262, 1346, 1526, 1628
BstDSI	CCRYGG	3 cut(s)	147, 691, 1419
BstF5I	GGATG	8 cut(s)	246, 321, 381, 459, 609, 1105, 1462, 1569
BstFNI	CGCG	2 cut(s)	441, 781
BstH2I	RGCGCY	2 cut(s)	108, 882
BstHHI	GCGC	2 cut(s)	107, 881
BstKTI	GATC	4 cut(s)	90, 672, 747, 1111
BstMAI	GTCTC	4 cut(s)	206, 511, 666, 770
BstMBI	GATC	4 cut(s)	87, 669, 744, 1108
BstMCI	CGRYCG	2 cut(s)	178, 280
BstMWI	GCNNNNNNNGC	7 cut(s)	90, 152, 642, 709, 739, 955, 1002
BstNI	CCWGG	4 cut(s)	425, 857, 935, 1272
BstNSI	RCATGY	1 cut(s)	361
BstSCI	CCNGG	4 cut(s)	423, 855, 933, 1270
BstSLI	GKGCMC	2 cut(s)	624, 1299
BstUI	CGCG	2 cut(s)	441, 781
BstV1I	GCAGC	5 cut(s)	629, 720, 945, 1152, 1194
BsuRI	GGCC	9 cut(s)	429, 452, 689, 700, 843, 874, 938, 1297, 1418
BtgI	CCRYGG	3 cut(s)	147, 691, 1419
BtgZI	GCGATG	1 cut(s)	1535
BtsCI	GGATG	8 cut(s)	246, 321, 381, 459, 609, 1105, 1462, 1569
BtsI	GCAGTG	1 cut(s)	259
BtsIMutI	CAGTG	2 cut(s)	259, 1167
Cac8I	GCNNGC	7 cut(s)	316, 454, 492, 589, 593, 687, 698
CfoI	GCGC	2 cut(s)	107, 881
Cfr10I	RCCGGY	2 cut(s)	314, 587
Cfr13I	GGNCC	9 cut(s)	427, 688, 698, 841, 853, 859, 873, 1295, 1296
CseI	GACGC	4 cut(s)	88, 206, 493, 787
CsiI	ACCWGGT	1 cut(s)	1270
Csp6I	GTAC	3 cut(s)	115, 598, 789
CviAII	CATG	6 cut(s)	148, 298, 307, 358, 466, 1420
CviQI	GTAC	3 cut(s)	115, 598, 789
DdeI	CTNAG	5 cut(s)	1159, 1262, 1346, 1526, 1628
DpnI	GATC	4 cut(s)	89, 671, 746, 1110
DpnII	GATC	4 cut(s)	87, 669, 744, 1108
DrdI	GACNNNNNNGTC	1 cut(s)	503
DriI	GACNNNNNGTC	1 cut(s)	658
DseDI	GACNNNNNNGTC	1 cut(s)	503
EaeI	YGGCCR	1 cut(s)	936
Eam1104I	CTCTTC	2 cut(s)	815, 966
Eam1105I	GACNNNNNGTC	1 cut(s)	658
EarI	CTCTTC	2 cut(s)	815, 966
EciI	GGCGGA	5 cut(s)	55, 194, 244, 301, 499
Eco130I	CCWWGG	3 cut(s)	79, 147, 1419
Eco24I	GRGCYC	3 cut(s)	369, 528, 1299
Eco31I	GGTCTC	2 cut(s)	206, 666
Eco47I	GGWCC	2 cut(s)	853, 859
Eco57I	CTGAAG	1 cut(s)	914
Eco88I	CYCGRG	2 cut(s)	665, 680
EcoO109I	RGGNCCY	3 cut(s)	859, 1295, 1296
EcoRII	CCWGG	4 cut(s)	423, 855, 933, 1270
EcoT14I	CCWWGG	3 cut(s)	79, 147, 1419
EcoT38I	GRGCYC	3 cut(s)	369, 528, 1299
ErhI	CCWWGG	3 cut(s)	79, 147, 1419
Esp3I	CGTCTC	2 cut(s)	511, 770
FaeI	CATG	6 cut(s)	151, 301, 310, 361, 469, 1423
FaiI	YATR	9 cut(s)	127, 149, 299, 308, 359, 467, 1377, 1421, 1445
FalI	AAGNNNNNCTT	2 cut(s)	32, 64
FatI	CATG	6 cut(s)	147, 297, 306, 357, 465, 1419
FauI	CCCGC	2 cut(s)	191, 689
FblI	GTMKAC	2 cut(s)	276, 519
Fnu4HI	GCNGC	9 cut(s)	283, 643, 701, 704, 734, 959, 1141, 1183, 1216
FokI	GGATG	8 cut(s)	233, 308, 368, 446, 616, 1112, 1469, 1576
FriOI	GRGCYC	3 cut(s)	369, 528, 1299
Fsp4HI	GCNGC	9 cut(s)	283, 643, 701, 704, 734, 959, 1141, 1183, 1216
FspBI	CTAG	3 cut(s)	80, 963, 1662
GlaI	GCGC	2 cut(s)	106, 880
GluI	GCNGC	9 cut(s)	283, 643, 701, 704, 734, 959, 1141, 1183, 1216
GsaI	CCCAGC	2 cut(s)	879, 1401
HaeII	RGCGCY	2 cut(s)	108, 882
HaeIII	GGCC	9 cut(s)	429, 452, 689, 700, 843, 874, 938, 1297, 1418
HapII	CCGG	4 cut(s)	96, 315, 588, 611
HgaI	GACGC	4 cut(s)	88, 206, 493, 787
HhaI	GCGC	2 cut(s)	107, 881
Hin1I	GRCGYC	4 cut(s)	99, 198, 504, 582
Hin1II	CATG	6 cut(s)	151, 301, 310, 361, 469, 1423
Hin6I	GCGC	2 cut(s)	105, 879
HinP1I	GCGC	2 cut(s)	105, 879
HincII	GTYRAC	2 cut(s)	139, 277
HindII	GTYRAC	2 cut(s)	139, 277
HpaII	CCGG	4 cut(s)	96, 315, 588, 611
HphI	GGTGA	7 cut(s)	262, 568, 664, 1260, 1318, 1435, 1489
Hpy166II	GTNNAC	7 cut(s)	115, 139, 277, 520, 622, 1268, 1352
Hpy188III	TCNNGA	9 cut(s)	14, 36, 56, 611, 667, 748, 817, 910, 1323
Hpy8I	GTNNAC	7 cut(s)	115, 139, 277, 520, 622, 1268, 1352
Hpy99I	CGWCG	9 cut(s)	113, 200, 278, 479, 565, 568, 584, 587, 727
HpyAV	CCTTC	4 cut(s)	211, 277, 313, 355
HpyCH4III	ACNGT	3 cut(s)	274, 917, 1438
HpyCH4IV	ACGT	2 cut(s)	560, 582
HpyCH4V	TGCA	4 cut(s)	372, 622, 645, 1366
HpyF10VI	GCNNNNNNNGC	7 cut(s)	90, 152, 642, 709, 739, 955, 1002
HpyF3I	CTNAG	5 cut(s)	1159, 1262, 1346, 1526, 1628
HpySE526I	ACGT	2 cut(s)	560, 582
Hsp92I	GRCGYC	4 cut(s)	99, 198, 504, 582
Hsp92II	CATG	6 cut(s)	151, 301, 310, 361, 469, 1423
HspAI	GCGC	2 cut(s)	105, 879
Kpn2I	TCCGGA	1 cut(s)	610
KroI	GCCGGC	2 cut(s)	314, 587
KroNI	GCCGGC	2 cut(s)	316, 589
Kzo9I	GATC	4 cut(s)	87, 669, 744, 1108
Lsp1109I	GCAGC	5 cut(s)	629, 720, 945, 1152, 1194
LweI	GCATC	2 cut(s)	721, 1512
MabI	ACCWGGT	1 cut(s)	1270
MaeI	CTAG	3 cut(s)	80, 963, 1662
MaeII	ACGT	2 cut(s)	560, 582
MaeIII	GTNAC	1 cut(s)	1477
MalI	GATC	4 cut(s)	89, 671, 746, 1110
MbiI	CCGCTC	2 cut(s)	180, 186
MboI	GATC	4 cut(s)	87, 669, 744, 1108
MboII	GAAGA	5 cut(s)	29, 832, 983, 1028, 1034
MhlI	GDGCHC	4 cut(s)	369, 528, 624, 1299
MlsI	TGGCCA	1 cut(s)	938
MluCI	AATT	4 cut(s)	1074, 1087, 1509, 1597
MluNI	TGGCCA	1 cut(s)	938
MmeI	TCCRAC	7 cut(s)	213, 342, 498, 567, 1557, 1587, 1599
Mox20I	TGGCCA	1 cut(s)	938
MroI	TCCGGA	1 cut(s)	610
MroNI	GCCGGC	2 cut(s)	314, 587
MroXI	GAANNNNTTC	2 cut(s)	755, 824
MscI	TGGCCA	1 cut(s)	938
MslI	CAYNNNNRTG	1 cut(s)	464
Msp20I	TGGCCA	1 cut(s)	938
MspA1I	CMGCKG	2 cut(s)	706, 1215
MspI	CCGG	4 cut(s)	96, 315, 588, 611
MspR9I	CCNGG	4 cut(s)	425, 857, 935, 1272
MvaI	CCWGG	4 cut(s)	425, 857, 935, 1272
MvnI	CGCG	2 cut(s)	441, 781
MwoI	GCNNNNNNNGC	7 cut(s)	90, 152, 642, 709, 739, 955, 1002
NaeI	GCCGGC	2 cut(s)	316, 589
NcoI	CCATGG	2 cut(s)	147, 1419
NdeII	GATC	4 cut(s)	87, 669, 744, 1108
NgoMIV	GCCGGC	2 cut(s)	314, 587
NlaIII	CATG	6 cut(s)	151, 301, 310, 361, 469, 1423
NlaIV	GGNNCC	9 cut(s)	94, 319, 366, 481, 609, 861, 1296, 1297, 1298
NmeAIII	GCCGAG	1 cut(s)	907
NmuCI	GTSAC	1 cut(s)	1477
NspI	RCATGY	1 cut(s)	361
PaeR7I	CTCGAG	1 cut(s)	680
PcsI	WCGNNNNNNNCGW	3 cut(s)	96, 1052, 1253
PdiI	GCCGGC	2 cut(s)	316, 589
PdmI	GAANNNNTTC	2 cut(s)	755, 824
PfeI	GAWTC	6 cut(s)	943, 1043, 1066, 1145, 1342, 1633
PflFI	GACNNNGTC	1 cut(s)	1174
PkrI	GCNGC	9 cut(s)	284, 644, 702, 705, 735, 960, 1142, 1184, 1217
PpuMI	RGGWCCY	1 cut(s)	859
Psp5II	RGGWCCY	1 cut(s)	859
Psp6I	CCWGG	4 cut(s)	423, 855, 933, 1270
PspFI	CCCAGC	2 cut(s)	875, 1397
PspGI	CCWGG	4 cut(s)	423, 855, 933, 1270
PspN4I	GGNNCC	9 cut(s)	94, 319, 366, 481, 609, 861, 1296, 1297, 1298
PspOMI	GGGCCC	1 cut(s)	1295
PspPI	GGNCC	9 cut(s)	427, 688, 698, 841, 853, 859, 873, 1295, 1296
PspPPI	RGGWCCY	1 cut(s)	859
PspXI	VCTCGAGB	1 cut(s)	680
PsyI	GACNNNGTC	1 cut(s)	1174
RsaI	GTAC	3 cut(s)	116, 599, 790
RsaNI	GTAC	3 cut(s)	115, 598, 789
RseI	CAYNNNNRTG	1 cut(s)	464
SalI	GTCGAC	1 cut(s)	275
SatI	GCNGC	9 cut(s)	283, 643, 701, 704, 734, 959, 1141, 1183, 1216
Sau3AI	GATC	4 cut(s)	87, 669, 744, 1108
Sau96I	GGNCC	9 cut(s)	427, 688, 698, 841, 853, 859, 873, 1295, 1296
ScrFI	CCNGG	4 cut(s)	425, 857, 935, 1272
SduI	GDGCHC	4 cut(s)	369, 528, 624, 1299
SexAI	ACCWGGT	1 cut(s)	1270
SfaNI	GCATC	2 cut(s)	721, 1512
Sfr274I	CTCGAG	1 cut(s)	680
SinI	GGWCC	2 cut(s)	853, 859
SlaI	CTCGAG	1 cut(s)	680
SmiMI	CAYNNNNRTG	1 cut(s)	464
SmlI	CTYRAG	2 cut(s)	386, 680
SmoI	CTYRAG	2 cut(s)	386, 680
SpeI	ACTAGT	1 cut(s)	1661
Sse9I	AATT	4 cut(s)	1074, 1087, 1509, 1597
SspMI	CTAG	3 cut(s)	80, 963, 1662
StyD4I	CCNGG	4 cut(s)	423, 855, 933, 1270
StyI	CCWWGG	3 cut(s)	79, 147, 1419
TaaI	ACNGT	3 cut(s)	274, 917, 1438
TaiI	ACGT	2 cut(s)	563, 585
TaqI	TCGA	9 cut(s)	29, 168, 174, 195, 276, 681, 725, 818, 1340
TaqII	GACCGA	2 cut(s)	505, 1187
TasI	AATT	4 cut(s)	1074, 1087, 1509, 1597
TatI	WGTACW	1 cut(s)	114
TauI	GCSGC	4 cut(s)	285, 703, 706, 1218
TfiI	GAWTC	6 cut(s)	943, 1043, 1066, 1145, 1342, 1633
TscAI	CASTG	2 cut(s)	266, 1167
TseFI	GTSAC	1 cut(s)	1477
TseI	GCWGC	5 cut(s)	642, 733, 958, 1140, 1182
Tsp45I	GTSAC	1 cut(s)	1477
TspDTI	ATGAA	3 cut(s)	295, 1035, 1056
TspGWI	ACGGA	6 cut(s)	124, 319, 472, 711, 806, 1180
TspRI	CASTG	2 cut(s)	266, 1167
Tth111I	GACNNNGTC	1 cut(s)	1174
VneI	GTGCAC	1 cut(s)	620
VpaK11BI	GGWCC	2 cut(s)	853, 859
XapI	RAATTY	2 cut(s)	1087, 1597
XceI	RCATGY	1 cut(s)	361
XhoI	CTCGAG	1 cut(s)	680
XmaJI	CCTAGG	1 cut(s)	79
XmiI	GTMKAC	2 cut(s)	276, 519
XmnI	GAANNNNTTC	2 cut(s)	755, 824
XspI	CTAG	3 cut(s)	80, 963, 1662
ZraI	GACGTC	1 cut(s)	583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.