Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0005157

Physical Location & Seq

Genomic Coordinates Forward (+)

13795447 .. 13797512

Gene Structure 2066 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g13320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGGGCTTGTTTCATATTTGGGCATCTTGCCTTGCATCCCAAGATATCGTTGACATGGGGCAAAATTCAAAACTTACATGTAATTTTCCTCCCACCAATGGGATAAATGAAAGCAGAGCACTACAGTCACACAGAGTCTCATGCATCGTCGTCTTCCTCCCAAAGCATCGACCTTTCACAAGAATTAGTTCGGCAGAAACCCTATTTCCCAGAAATCCAAACAACCCACTTCCATTCTTCAAGATTTCGTCTTTGTCTTCTCCAATGGCGAGTTCTTCGTCTTCTTCCTCCAACCAAGATAGCCAACAAAAGGTCCAATTCCCGTTGGACTCCGCCGCGTACGAAAACCTCCAAGAAATCGGATCTGGCGACAAGGTCGTCGTCTACAAGGCCGTCTGCGTCCCCATGAACTCTGCAATCGTCGCAATCAAGTCCGTCGACCTCAATCAATCCACGGCCGATTTCGAGAGTAAGCTACGCGACACCAAGAATCTGTCTCTTTCCCACCCCAACATTCTCGGCGACCACTGCTCCTTCACCACCACCGACCTCACCACCACCGAGCGCCGTCTTTGGGTGGTCATGCCGTTCATGACCTTCGGCTCTCTGCAATCCGTAATAATCGCCCCCTCTGCTTTCCCGAAAGGATTACCAGAGCCCTGCATTGCAGTCGTCCTGAAAGAGACGCTAAACGCCATGTCGTATCTCCATGGCCACGGATGCTTCCACCGCGACATCAAGCCCGGAAACATCTTGGTTGACTCTGATGGGTCCGTTAAGCTTGCACATTTCGGGGTCTCTGCTTCTTTCTACGACGCCGATTTTTCAACTGGGGCAAACGATACTTCTACAAGGCCGTACTGGGTGGCGCCCGGCGGAGGTGGGTGCAAGGCGGATATCTGGGCATTTGGGATCACGGCGCTGGAATTGGCTCTGGGCGGCCCTCCCCTGTCTGGCTTGCCGCTGTTATCAGGGAATCAAATTCTGAAGATCAAGAACAGGTTTCGGCTTGCGGATTACGAAAACATCATCAAAGATTTCCGGAACCAGAAATACTCTGCGGCTTTCAAGGACTTGGTGGCTTCTTGGCTTGATCGGGACCCGGAGAAGAGGCCGGCGGCAGAGGTGCTGCTGAAGCACCCGTTTTTCCACGACTGCAGAGGCAAGGATTATCTGGTGGGGACTGTGCTTCCGCATTTGGAGAGCGTCGAGGAGAGATTCAAGAAAAGAAACAGGGGTTTGGGTGACTTGTTGGGCAAGGTAAACTATGGAGAACTAAAGGGTGAGGATATGGGGTTTAGCGGATGGAATTTCAACGTGGACGACTTTGTTTTCAACCCGGCTTTTTTGGCTGGGCCGTCTTCTACTTCCAACTCTAGGTTTTATGGCAGCGGCAAATTCCGGCTGTCCAGATTTGTAATGAGGTTGGCAAAGCAATTACAGACTGTGAAGATGACTATTGGTCAGTTGAATAAAGCAGTTGGGGTGAGGATGCCGAAAAATGTAGAGATTTGGATGCTGATGAATGCGCTGGACAAAGAGAAGGAAGATCTTATGCAGTTGCAGATTAAGTTGAGGGAGTTTGTTTTGGACCCGATTTATCCGGCTGGGTGGTCTTCTCCTCCCAGCCCTCCAACTGAGTCTTCTGACGGTGGCAAAGCTGGGCTGGTGGTGTTGCTGGTGGAATTGCTGGTGGAATTGCTGGGAATTGCAAGAAATTTGGAAAAGCAGATGGAGAAGGTGATGACAATTATTCGTCTGTTGGGAGGAGCAGGGGAGGTTGAGAAGCTGGAGAATCAGTTGGCGTCTGAGTTCACAACATGTAAGCTGTTTCAGGTAGCGTTGAAGCTGATCAAGCTAAAGTTGGACCCTGATGGAAGAGATTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010119 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902456

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

630

Amino Acids

69.47

Weight (kDa)

8.5

Isoelectric Point (pI)

38.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	114 - 383	1.6e-37	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	117 - 377	4.6e-25	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005157)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14480
fragaria_vesca	FvH4_4g03000
malus_domestica	MD01G1106400.v1.1 MD01G1106800.v1.1 MD02G1095900.v1.1 MD04G1063400.v1.1 MD04G1063500.v1.1 MD07G1020600.v1.1 MD07G1020800.v1.1 MD16G1212100.v1.1
prunus_persica	Prupe.1G031800_v2.0.a1 Prupe.1G033800_v2.0.a1 Prupe.1G034000_v2.0.a1 Prupe.4G193100_v2.0.a1
pyrus_communis	pycom01g13320 pycom01g13330 pycom01g13350 pycom07g01600 pycom16g17810
rosa_chinensis	RchiOBHm_Chr4g0391181
rosa_laevigata	RLG00000009879
rosa_multiflora	Rmu_co8201760.1_g000001 Rmu_sc0000040.1_g000009
rosa_roxburghii	Rroxscaffold_5G00336980
rosa_rugosa	Rorug03G0334900
rosa_samantha	Rh4AG035700 Rh4BG030700 Rh4CG039000 Rh4DG033200
rosa_wichuraiana	Rw4G002800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	377
AccB1I	GGYRCC	1 cut(s)	868
AccI	GTMKAC	2 cut(s)	384, 438
AccII	CGCG	3 cut(s)	338, 480, 732
AccIII	TCCGGA	1 cut(s)	1041
AclWI	GGATC	2 cut(s)	370, 920
AcoI	YGGCCR	2 cut(s)	456, 712
AcsI	RAATTY	5 cut(s)	64, 981, 1309, 1397, 1717
AcuI	CTGAAG	2 cut(s)	1007, 1154
AcyI	GRCGYC	3 cut(s)	816, 869, 1805
AfaI	GTAC	2 cut(s)	341, 860
AfiI	CCNNNNNNNGG	7 cut(s)	98, 99, 310, 574, 878, 953, 1377
AflIII	ACRYGT	2 cut(s)	77, 1820
AgsI	TTSAA	9 cut(s)	69, 241, 828, 1069, 1222, 1315, 1336, 1471, 1846
AhdI	GACNNNNNGTC	1 cut(s)	1461
AjuI	GAANNNNNNNTTGG	4 cut(s)	256, 288, 1627, 1659
AluBI	AGCT	7 cut(s)	475, 781, 1661, 1789, 1828, 1849, 1858
AluI	AGCT	7 cut(s)	475, 781, 1661, 1789, 1828, 1849, 1858
Alw21I	GWGCWC	1 cut(s)	121
Alw26I	GTCTC	4 cut(s)	142, 501, 677, 802
AlwI	GGATC	2 cut(s)	370, 920
Aor13HI	TCCGGA	1 cut(s)	1041
AoxI	GGCC	7 cut(s)	390, 456, 712, 854, 940, 1112, 1355
ApeKI	GCWGC	2 cut(s)	1129, 1389
ApoI	RAATTY	5 cut(s)	64, 981, 1309, 1397, 1717
Asp700I	GAANNNNTTC	1 cut(s)	187
AspLEI	GCGC	4 cut(s)	567, 871, 922, 1531
AspS9I	GGNCC	7 cut(s)	313, 771, 941, 1099, 1355, 1591, 1867
AsuC2I	CCSGG	4 cut(s)	744, 873, 1103, 1340
AsuHPI	GGTGA	6 cut(s)	529, 544, 1256, 1295, 1498, 1753
AvaII	GGWCC	5 cut(s)	313, 771, 1099, 1591, 1867
BalI	TGGCCA	1 cut(s)	714
BanI	GGYRCC	1 cut(s)	868
BanII	GRGCYC	1 cut(s)	660
BbsI	GAAGAC	6 cut(s)	145, 249, 273, 1353, 1608, 1635
Bbv12I	GWGCWC	1 cut(s)	121
BbvI	GCAGC	2 cut(s)	1116, 1401
BccI	CCATC	4 cut(s)	761, 1299, 1726, 1868
BceAI	ACGGC	7 cut(s)	377, 471, 552, 571, 841, 933, 1342
BcgI	CGANNNNNNTGC	2 cut(s)	652, 686
BclI	TGATCA	1 cut(s)	1851
BcnI	CCSGG	4 cut(s)	744, 873, 1103, 1340
BcoDI	GTCTC	4 cut(s)	142, 501, 677, 802
BfaI	CTAG	1 cut(s)	1377
BfmI	CTRYAG	2 cut(s)	122, 1156
BfoI	RGCGCY	3 cut(s)	568, 872, 923
BglII	AGATCT	1 cut(s)	1549
BisI	GCNGC	8 cut(s)	336, 940, 962, 1062, 1119, 1130, 1390, 1393
BlsI	GCNGC	8 cut(s)	337, 941, 963, 1063, 1120, 1131, 1391, 1394
Bme1390I	CCNGG	4 cut(s)	744, 873, 1103, 1340
Bme18I	GGWCC	5 cut(s)	313, 771, 1099, 1591, 1867
BmeRI	GACNNNNNGTC	1 cut(s)	1461
BmgT120I	GGNCC	7 cut(s)	313, 771, 941, 1099, 1355, 1591, 1867
BmiI	GGNNCC	7 cut(s)	772, 870, 1046, 1100, 1101, 1593, 1869
BmrFI	CCNGG	4 cut(s)	744, 873, 1103, 1340
BmrI	ACTGGG	2 cut(s)	840, 871
BmsI	GCATC	7 cut(s)	32, 44, 153, 175, 710, 1482, 1506
BmuI	ACTGGG	2 cut(s)	840, 871
BpiI	GAAGAC	6 cut(s)	145, 249, 273, 1353, 1608, 1635
BpmI	CTGGAG	1 cut(s)	1811
BpuMI	CCSGG	4 cut(s)	744, 873, 1103, 1340
BsaHI	GRCGYC	3 cut(s)	816, 869, 1805
BsaI	GGTCTC	1 cut(s)	802
BsaJI	CCNNGG	3 cut(s)	453, 709, 715
BsaWI	WCCGGW	1 cut(s)	1041
BsaXI	ACNNNNNCTCC	4 cut(s)	515, 545, 1784, 1814
Bsc4I	CCNNNNNNNGG	7 cut(s)	98, 99, 310, 574, 878, 953, 1377
Bse118I	RCCGGY	1 cut(s)	1114
Bse1I	ACTGG	2 cut(s)	835, 866
Bse3DI	GCAATG	1 cut(s)	663
BseAI	TCCGGA	1 cut(s)	1041
BseDI	CCNNGG	3 cut(s)	453, 709, 715
BseGI	GGATG	5 cut(s)	35, 725, 1310, 1497, 1521
BseLI	CCNNNNNNNGG	7 cut(s)	98, 99, 310, 574, 878, 953, 1377
BseMI	GCAATG	1 cut(s)	663
BseMII	CTCAG	2 cut(s)	1629, 1800
BseNI	ACTGG	2 cut(s)	835, 866
BseRI	GAGGAG	3 cut(s)	1226, 1611, 1782
BseX3I	CGGCCG	1 cut(s)	456
BseXI	GCAGC	2 cut(s)	1116, 1401
BseYI	CCCAGC	5 cut(s)	1352, 1607, 1625, 1661, 1702
Bsh1236I	CGCG	3 cut(s)	338, 480, 732
Bsh1285I	CGRYCG	1 cut(s)	459
BshFI	GGCC	7 cut(s)	392, 458, 714, 856, 942, 1114, 1357
BshNI	GGYRCC	1 cut(s)	868
BsiEI	CGRYCG	1 cut(s)	459
BsiHKAI	GWGCWC	1 cut(s)	121
BsiSI	CCGG	8 cut(s)	744, 873, 1042, 1103, 1115, 1340, 1402, 1604
BsiWI	CGTACG	1 cut(s)	339
BslFI	GGGAC	3 cut(s)	386, 1112, 1195
BslI	CCNNNNNNNGG	7 cut(s)	98, 99, 310, 574, 878, 953, 1377
BsmAI	GTCTC	4 cut(s)	142, 501, 677, 802
BsmBI	CGTCTC	1 cut(s)	677
BsmFI	GGGAC	3 cut(s)	386, 1112, 1195
BsmI	GAATGC	1 cut(s)	1531
BsnI	GGCC	7 cut(s)	392, 458, 714, 856, 942, 1114, 1357
Bso31I	GGTCTC	1 cut(s)	802
Bsp1286I	GDGCHC	2 cut(s)	121, 660
Bsp13I	TCCGGA	1 cut(s)	1041
Bsp143I	GATC	6 cut(s)	362, 912, 990, 1093, 1549, 1851
Bsp19I	CCATGG	1 cut(s)	709
BspANI	GGCC	7 cut(s)	392, 458, 714, 856, 942, 1114, 1357
BspCNI	CTCAG	2 cut(s)	1630, 1801
BspEI	TCCGGA	1 cut(s)	1041
BspFNI	CGCG	3 cut(s)	338, 480, 732
BspHI	TCATGA	1 cut(s)	591
BspLI	GGNNCC	7 cut(s)	772, 870, 1046, 1100, 1101, 1593, 1869
BspMAI	CTGCAG	1 cut(s)	1160
BspPI	GGATC	2 cut(s)	370, 920
BspT107I	GGYRCC	1 cut(s)	868
BspTNI	GGTCTC	1 cut(s)	802
BsrDI	GCAATG	1 cut(s)	663
BsrFI	RCCGGY	1 cut(s)	1114
BsrI	ACTGG	2 cut(s)	835, 866
BssAI	RCCGGY	1 cut(s)	1114
BssECI	CCNNGG	3 cut(s)	453, 709, 715
BssMI	GATC	6 cut(s)	362, 912, 990, 1093, 1549, 1851
BssNI	GRCGYC	3 cut(s)	816, 869, 1805
BssT1I	CCWWGG	1 cut(s)	709
Bst4CI	ACNGT	4 cut(s)	126, 1186, 1447, 1652
Bst6I	CTCTTC	2 cut(s)	1103, 1873
BstACI	GRCGYC	3 cut(s)	816, 869, 1805
BstC8I	GCNNGC	4 cut(s)	783, 959, 1011, 1116
BstDEI	CTNAG	2 cut(s)	1638, 1809
BstDSI	CCRYGG	3 cut(s)	453, 709, 715
BstF5I	GGATG	5 cut(s)	35, 725, 1310, 1497, 1521
BstFNI	CGCG	3 cut(s)	338, 480, 732
BstH2I	RGCGCY	3 cut(s)	568, 872, 923
BstHHI	GCGC	4 cut(s)	567, 871, 922, 1531
BstKTI	GATC	6 cut(s)	365, 915, 993, 1096, 1552, 1854
BstMAI	GTCTC	4 cut(s)	142, 501, 677, 802
BstMBI	GATC	6 cut(s)	362, 912, 990, 1093, 1549, 1851
BstMCI	CGRYCG	1 cut(s)	459
BstMWI	GCNNNNNNNGC	8 cut(s)	422, 528, 632, 720, 729, 1135, 1349, 1855
BstNSI	RCATGY	2 cut(s)	81, 1824
BstSCI	CCNGG	4 cut(s)	742, 871, 1101, 1338
BstSFI	CTRYAG	2 cut(s)	122, 1156
BstUI	CGCG	3 cut(s)	338, 480, 732
BstV1I	GCAGC	2 cut(s)	1116, 1401
BstV2I	GAAGAC	6 cut(s)	145, 249, 273, 1353, 1608, 1635
BstX2I	RGATCY	2 cut(s)	362, 1549
BstYI	RGATCY	2 cut(s)	362, 1549
BstZI	CGGCCG	1 cut(s)	456
BsuRI	GGCC	7 cut(s)	392, 458, 714, 856, 942, 1114, 1357
BtgI	CCRYGG	3 cut(s)	453, 709, 715
BtsCI	GGATG	5 cut(s)	35, 725, 1310, 1497, 1521
BtsI	GCAGTG	1 cut(s)	526
BtsIMutI	CAGTG	1 cut(s)	526
Cac8I	GCNNGC	4 cut(s)	783, 959, 1011, 1116
CciI	TCATGA	1 cut(s)	591
CfoI	GCGC	4 cut(s)	567, 871, 922, 1531
Cfr10I	RCCGGY	1 cut(s)	1114
Cfr13I	GGNCC	7 cut(s)	313, 771, 941, 1099, 1355, 1591, 1867
CseI	GACGC	5 cut(s)	388, 694, 824, 1195, 1794
Csp6I	GTAC	2 cut(s)	340, 859
CviAII	CATG	9 cut(s)	55, 78, 141, 406, 583, 592, 697, 710, 1821
CviQI	GTAC	2 cut(s)	340, 859
DdeI	CTNAG	2 cut(s)	1638, 1809
DinI	GGCGCC	1 cut(s)	870
DpnI	GATC	6 cut(s)	364, 914, 992, 1095, 1551, 1853
DpnII	GATC	6 cut(s)	362, 912, 990, 1093, 1549, 1851
DrdI	GACNNNNNNGTC	1 cut(s)	377
DriI	GACNNNNNGTC	1 cut(s)	1461
DseDI	GACNNNNNNGTC	1 cut(s)	377
EaeI	YGGCCR	2 cut(s)	456, 712
EagI	CGGCCG	1 cut(s)	456
Eam1104I	CTCTTC	2 cut(s)	1103, 1873
Eam1105I	GACNNNNNGTC	1 cut(s)	1461
EarI	CTCTTC	2 cut(s)	1103, 1873
EciI	GGCGGA	3 cut(s)	322, 891, 908
EclXI	CGGCCG	1 cut(s)	456
Eco130I	CCWWGG	1 cut(s)	709
Eco24I	GRGCYC	1 cut(s)	660
Eco31I	GGTCTC	1 cut(s)	802
Eco32I	GATATC	2 cut(s)	46, 898
Eco47I	GGWCC	5 cut(s)	313, 771, 1099, 1591, 1867
Eco52I	CGGCCG	1 cut(s)	456
Eco57I	CTGAAG	2 cut(s)	1007, 1154
EcoO109I	RGGNCCY	1 cut(s)	1099
EcoRV	GATATC	2 cut(s)	46, 898
EcoT14I	CCWWGG	1 cut(s)	709
EcoT22I	ATGCAT	1 cut(s)	146
EcoT38I	GRGCYC	1 cut(s)	660
EgeI	GGCGCC	1 cut(s)	870
EheI	GGCGCC	1 cut(s)	870
ErhI	CCWWGG	1 cut(s)	709
Esp3I	CGTCTC	1 cut(s)	677
FaeI	CATG	9 cut(s)	58, 81, 144, 409, 586, 595, 700, 713, 1824
FaqI	GGGAC	3 cut(s)	386, 1112, 1195
FatI	CATG	9 cut(s)	54, 77, 140, 405, 582, 591, 696, 709, 1820
FbaI	TGATCA	1 cut(s)	1851
FblI	GTMKAC	2 cut(s)	384, 438
Fnu4HI	GCNGC	8 cut(s)	336, 940, 962, 1062, 1119, 1130, 1390, 1393
FokI	GGATG	5 cut(s)	22, 732, 1317, 1504, 1528
FriOI	GRGCYC	1 cut(s)	660
Fsp4HI	GCNGC	8 cut(s)	336, 940, 962, 1062, 1119, 1130, 1390, 1393
FspBI	CTAG	1 cut(s)	1377
GlaI	GCGC	4 cut(s)	566, 870, 921, 1530
GluI	GCNGC	8 cut(s)	336, 940, 962, 1062, 1119, 1130, 1390, 1393
GsaI	CCCAGC	5 cut(s)	1356, 1611, 1629, 1665, 1706
GsuI	CTGGAG	1 cut(s)	1811
HaeII	RGCGCY	3 cut(s)	568, 872, 923
HaeIII	GGCC	7 cut(s)	392, 458, 714, 856, 942, 1114, 1357
HapII	CCGG	8 cut(s)	744, 873, 1042, 1103, 1115, 1340, 1402, 1604
HgaI	GACGC	5 cut(s)	388, 694, 824, 1195, 1794
HhaI	GCGC	4 cut(s)	567, 871, 922, 1531
Hin1I	GRCGYC	3 cut(s)	816, 869, 1805
Hin1II	CATG	9 cut(s)	58, 81, 144, 409, 586, 595, 700, 713, 1824
Hin6I	GCGC	4 cut(s)	565, 869, 920, 1529
HinP1I	GCGC	4 cut(s)	565, 869, 920, 1529
HincII	GTYRAC	3 cut(s)	52, 439, 760
HindII	GTYRAC	3 cut(s)	52, 439, 760
HindIII	AAGCTT	1 cut(s)	779
HinfI	GANTC	8 cut(s)	135, 329, 490, 761, 976, 1218, 1640, 1795
HpaII	CCGG	8 cut(s)	744, 873, 1042, 1103, 1115, 1340, 1402, 1604
HphI	GGTGA	6 cut(s)	529, 544, 1256, 1295, 1498, 1753
Hpy166II	GTNNAC	7 cut(s)	52, 385, 439, 760, 1264, 1321, 1815
Hpy188I	TCNGA	5 cut(s)	362, 766, 987, 1648, 1810
Hpy8I	GTNNAC	7 cut(s)	52, 385, 439, 760, 1264, 1321, 1815
Hpy99I	CGWCG	6 cut(s)	152, 383, 425, 440, 818, 1211
HpyAV	CCTTC	4 cut(s)	544, 607, 1537, 1732
HpyCH4III	ACNGT	4 cut(s)	126, 1186, 1447, 1652
HpyCH4IV	ACGT	1 cut(s)	1317
HpyF10VI	GCNNNNNNNGC	8 cut(s)	422, 528, 632, 720, 729, 1135, 1349, 1855
HpyF3I	CTNAG	2 cut(s)	1638, 1809
HpySE526I	ACGT	1 cut(s)	1317
Hsp92I	GRCGYC	3 cut(s)	816, 869, 1805
Hsp92II	CATG	9 cut(s)	58, 81, 144, 409, 586, 595, 700, 713, 1824
HspAI	GCGC	4 cut(s)	565, 869, 920, 1529
KasI	GGCGCC	1 cut(s)	868
KflI	GGGWCCC	1 cut(s)	1099
Kpn2I	TCCGGA	1 cut(s)	1041
KroI	GCCGGC	1 cut(s)	1114
KroNI	GCCGGC	1 cut(s)	1116
Ksp22I	TGATCA	1 cut(s)	1851
Kzo9I	GATC	6 cut(s)	362, 912, 990, 1093, 1549, 1851
LmnI	GCTCC	2 cut(s)	536, 1769
Lsp1109I	GCAGC	2 cut(s)	1116, 1401
LweI	GCATC	7 cut(s)	32, 44, 153, 175, 710, 1482, 1506
MaeI	CTAG	1 cut(s)	1377
MaeII	ACGT	1 cut(s)	1317
MaeIII	GTNAC	2 cut(s)	126, 1244
MalI	GATC	6 cut(s)	364, 914, 992, 1095, 1551, 1853
MboI	GATC	6 cut(s)	362, 912, 990, 1093, 1549, 1851
MflI	RGATCY	2 cut(s)	362, 1549
MhlI	GDGCHC	2 cut(s)	121, 660
MlsI	TGGCCA	1 cut(s)	714
MluNI	TGGCCA	1 cut(s)	714
Mly113I	GGCGCC	1 cut(s)	869
MlyI	GAGTC	4 cut(s)	144, 323, 755, 1649
MmeI	TCCRAC	5 cut(s)	306, 315, 1395, 1658, 1845
Mox20I	TGGCCA	1 cut(s)	714
Mph1103I	ATGCAT	1 cut(s)	146
MroI	TCCGGA	1 cut(s)	1041
MroNI	GCCGGC	1 cut(s)	1114
MroXI	GAANNNNTTC	1 cut(s)	187
MscI	TGGCCA	1 cut(s)	714
MseI	TTAA	3 cut(s)	777, 1569, 1888
Msp20I	TGGCCA	1 cut(s)	714
MspA1I	CMGCKG	2 cut(s)	964, 1392
MspI	CCGG	8 cut(s)	744, 873, 1042, 1103, 1115, 1340, 1402, 1604
MspR9I	CCNGG	4 cut(s)	744, 873, 1103, 1340
Mva1269I	GAATGC	1 cut(s)	1531
MvnI	CGCG	3 cut(s)	338, 480, 732
MwoI	GCNNNNNNNGC	8 cut(s)	422, 528, 632, 720, 729, 1135, 1349, 1855
NaeI	GCCGGC	1 cut(s)	1116
NarI	GGCGCC	1 cut(s)	869
NciI	CCSGG	4 cut(s)	744, 873, 1103, 1340
NcoI	CCATGG	1 cut(s)	709
NdeII	GATC	6 cut(s)	362, 912, 990, 1093, 1549, 1851
NgoMIV	GCCGGC	1 cut(s)	1114
NlaIII	CATG	9 cut(s)	58, 81, 144, 409, 586, 595, 700, 713, 1824
NlaIV	GGNNCC	7 cut(s)	772, 870, 1046, 1100, 1101, 1593, 1869
NmeAIII	GCCGAG	1 cut(s)	498
NmuCI	GTSAC	2 cut(s)	126, 1244
NsiI	ATGCAT	1 cut(s)	146
NspI	RCATGY	2 cut(s)	81, 1824
PagI	TCATGA	1 cut(s)	591
PciI	ACATGT	2 cut(s)	77, 1820
PcsI	WCGNNNNNNNCGW	1 cut(s)	366
PctI	GAATGC	1 cut(s)	1531
PdiI	GCCGGC	1 cut(s)	1116
PdmI	GAANNNNTTC	1 cut(s)	187
PfeI	GAWTC	4 cut(s)	490, 976, 1218, 1795
Pfl23II	CGTACG	1 cut(s)	339
PflFI	GACNNNGTC	1 cut(s)	374
PkrI	GCNGC	8 cut(s)	337, 941, 963, 1063, 1120, 1131, 1391, 1394
PleI	GAGTC	4 cut(s)	143, 323, 755, 1648
PluTI	GGCGCC	1 cut(s)	872
PpsI	GAGTC	4 cut(s)	143, 323, 755, 1648
PpuMI	RGGWCCY	1 cut(s)	1099
PscI	ACATGT	2 cut(s)	77, 1820
Psp5II	RGGWCCY	1 cut(s)	1099
PspFI	CCCAGC	5 cut(s)	1352, 1607, 1625, 1661, 1702
PspLI	CGTACG	1 cut(s)	339
PspN4I	GGNNCC	7 cut(s)	772, 870, 1046, 1100, 1101, 1593, 1869
PspPI	GGNCC	7 cut(s)	313, 771, 941, 1099, 1355, 1591, 1867
PspPPI	RGGWCCY	1 cut(s)	1099
PsrI	GAACNNNNNNTAC	2 cut(s)	1037, 1069
PstI	CTGCAG	1 cut(s)	1160
PsuI	RGATCY	2 cut(s)	362, 1549
PsyI	GACNNNGTC	1 cut(s)	374
RsaI	GTAC	2 cut(s)	341, 860
RsaNI	GTAC	2 cut(s)	340, 859
SalI	GTCGAC	1 cut(s)	437
SaqAI	TTAA	3 cut(s)	777, 1569, 1888
SatI	GCNGC	8 cut(s)	336, 940, 962, 1062, 1119, 1130, 1390, 1393
Sau3AI	GATC	6 cut(s)	362, 912, 990, 1093, 1549, 1851
Sau96I	GGNCC	7 cut(s)	313, 771, 941, 1099, 1355, 1591, 1867
SchI	GAGTC	4 cut(s)	144, 323, 755, 1649
ScrFI	CCNGG	4 cut(s)	744, 873, 1103, 1340
SduI	GDGCHC	2 cut(s)	121, 660
SfaNI	GCATC	7 cut(s)	32, 44, 153, 175, 710, 1482, 1506
SfcI	CTRYAG	2 cut(s)	122, 1156
SfoI	GGCGCC	1 cut(s)	870
SinI	GGWCC	5 cut(s)	313, 771, 1099, 1591, 1867
SspDI	GGCGCC	1 cut(s)	868
SspMI	CTAG	1 cut(s)	1377
StyD4I	CCNGG	4 cut(s)	742, 871, 1101, 1338
StyI	CCWWGG	1 cut(s)	709
TaaI	ACNGT	4 cut(s)	126, 1186, 1447, 1652
TaiI	ACGT	1 cut(s)	1320
TaqI	TCGA	4 cut(s)	169, 438, 465, 1209
TauI	GCSGC	6 cut(s)	338, 942, 964, 1064, 1121, 1395
TfiI	GAWTC	4 cut(s)	490, 976, 1218, 1795
Tru1I	TTAA	3 cut(s)	777, 1569, 1888
Tru9I	TTAA	3 cut(s)	777, 1569, 1888
TscAI	CASTG	1 cut(s)	533
TseFI	GTSAC	2 cut(s)	126, 1244
TseI	GCWGC	2 cut(s)	1129, 1389
Tsp45I	GTSAC	2 cut(s)	126, 1244
TspDTI	ATGAA	4 cut(s)	123, 422, 580, 1538
TspGWI	ACGGA	4 cut(s)	424, 604, 732, 763
TspRI	CASTG	1 cut(s)	533
Tth111I	GACNNNGTC	1 cut(s)	374
VpaK11BI	GGWCC	5 cut(s)	313, 771, 1099, 1591, 1867
XapI	RAATTY	5 cut(s)	64, 981, 1309, 1397, 1717
XceI	RCATGY	2 cut(s)	81, 1824
XmiI	GTMKAC	2 cut(s)	384, 438
XmnI	GAANNNNTTC	1 cut(s)	187
XspI	CTAG	1 cut(s)	1377
Zsp2I	ATGCAT	1 cut(s)	146

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.