Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0005157

Physical Location & Seq

Genomic Coordinates Forward (+)

11632720 .. 11634295

Gene Structure 1576 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G193100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 576 bp

ATGTCCGCCGTGTCGCTCCAATCCATAATCTCCTCTGCTTTCCCCGACGGCCTACCGGAGCCCTGCATTGCTGTCGTCCTCAGGGAGACACTGAACGCCATGTCGTATCTTCATGATCAAGGGCACCTCCACAGAGACATCAAGGCTGGTAATAACTTGATCGACTCCAATGGGTCGGTGAATGTTGCAGACTTTGGGGTTTCTGCTTCTGTTTATGAGGCCAATTCGAGTGGAGAGTCATCGATTCGGTTAAACGACATTGCTGGGACGCCGTACTGGATGGCGCCTGATGTGATACACTCGCACAATGGATACGGATGCAAGGCGGATATATGGTCTTTTGGGATCACAGCTCCGGAATTGGCTCATGGGGGGCCCCCCCTGTCTAACTTGCCTCCTTCAAAGTCTCTGCGTTTGAAGATCACGAAGCGGTTTCGGTTTTCGGATTATGAAAATCGTCACGACAATAATTACAAGAGCAAGAAGTTCTCTAAGGCCTTTAAAGACTTGGTGGGTTGTTGCCTTGATCAGGACCCGAACAAGAGGCCCACGGCGGAGAGGTTGCTTTGCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010119 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902456

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

192

Amino Acids

20.92

Weight (kDa)

7.04

Isoelectric Point (pI)

37.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005157)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14480
fragaria_vesca	FvH4_4g03000
malus_domestica	MD01G1106400.v1.1 MD01G1106800.v1.1 MD02G1095900.v1.1 MD04G1063400.v1.1 MD04G1063500.v1.1 MD07G1020600.v1.1 MD07G1020800.v1.1 MD16G1212100.v1.1
prunus_persica	Prupe.1G031800_v2.0.a1 Prupe.1G033800_v2.0.a1 Prupe.1G034000_v2.0.a1 Prupe.4G193100_v2.0.a1
pyrus_communis	pycom01g13320 pycom01g13330 pycom01g13350 pycom07g01600 pycom16g17810
rosa_chinensis	RchiOBHm_Chr4g0391181
rosa_laevigata	RLG00000009879
rosa_multiflora	Rmu_co8201760.1_g000001 Rmu_sc0000040.1_g000009
rosa_roxburghii	Rroxscaffold_5G00336980
rosa_rugosa	Rorug03G0334900
rosa_samantha	Rh4AG035700 Rh4BG030700 Rh4CG039000 Rh4DG033200
rosa_wichuraiana	Rw4G002800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	123, 283
AccIII	TCCGGA	1 cut(s)	355
AciI	CCGC	4 cut(s)	6, 326, 430, 554
AclWI	GGATC	1 cut(s)	353
AcyI	GRCGYC	2 cut(s)	269, 284
AfaI	GTAC	1 cut(s)	275
AfiI	CCNNNNNNNGG	1 cut(s)	529
AgsI	TTSAA	2 cut(s)	402, 418
AluBI	AGCT	1 cut(s)	353
AluI	AGCT	1 cut(s)	353
Alw26I	GTCTC	3 cut(s)	80, 129, 411
AlwI	GGATC	1 cut(s)	353
Aor13HI	TCCGGA	1 cut(s)	355
AoxI	GGCC	5 cut(s)	49, 219, 374, 495, 545
ApaI	GGGCCC	1 cut(s)	378
AspLEI	GCGC	1 cut(s)	286
AspS9I	GGNCC	4 cut(s)	374, 375, 532, 546
AsuHPI	GGTGA	1 cut(s)	190
AvaII	GGWCC	1 cut(s)	532
AxyI	CCTNAGG	1 cut(s)	80
BaeGI	GKGCMC	2 cut(s)	126, 378
BanI	GGYRCC	2 cut(s)	123, 283
BanII	GRGCYC	2 cut(s)	63, 378
BccI	CCATC	1 cut(s)	274
BceAI	ACGGC	3 cut(s)	64, 256, 567
BcgI	CGANNNNNNTGC	2 cut(s)	55, 89
BciVI	GTATCC	1 cut(s)	305
BclI	TGATCA	2 cut(s)	115, 526
BcoDI	GTCTC	3 cut(s)	80, 129, 411
BfoI	RGCGCY	1 cut(s)	287
BfuI	GTATCC	1 cut(s)	305
Bme18I	GGWCC	1 cut(s)	532
BmgT120I	GGNCC	4 cut(s)	374, 375, 532, 546
BmiI	GGNNCC	7 cut(s)	60, 125, 285, 375, 376, 377, 534
BmsI	GCATC	1 cut(s)	308
Bsa29I	ATCGAT	1 cut(s)	242
BsaHI	GRCGYC	2 cut(s)	269, 284
BsaJI	CCNNGG	1 cut(s)	549
BsaWI	WCCGGW	2 cut(s)	55, 355
Bsc4I	CCNNNNNNNGG	1 cut(s)	529
Bse1I	ACTGG	1 cut(s)	281
Bse21I	CCTNAGG	1 cut(s)	80
Bse3DI	GCAATG	2 cut(s)	66, 258
BseAI	TCCGGA	1 cut(s)	355
BseCI	ATCGAT	1 cut(s)	242
BseDI	CCNNGG	1 cut(s)	549
BseGI	GGATG	2 cut(s)	285, 323
BseLI	CCNNNNNNNGG	1 cut(s)	529
BseMI	GCAATG	2 cut(s)	66, 258
BseMII	CTCAG	1 cut(s)	94
BseNI	ACTGG	1 cut(s)	281
BseRI	GAGGAG	1 cut(s)	22
BseSI	GKGCMC	2 cut(s)	126, 378
BseYI	CCCAGC	1 cut(s)	263
BshFI	GGCC	5 cut(s)	51, 221, 376, 497, 547
BshNI	GGYRCC	2 cut(s)	123, 283
BshVI	ATCGAT	1 cut(s)	242
BsiSI	CCGG	2 cut(s)	56, 356
BslFI	GGGAC	1 cut(s)	280
BslI	CCNNNNNNNGG	1 cut(s)	529
BsmAI	GTCTC	3 cut(s)	80, 129, 411
BsmFI	GGGAC	1 cut(s)	280
BsnI	GGCC	5 cut(s)	51, 221, 376, 497, 547
Bsp120I	GGGCCC	1 cut(s)	374
Bsp1286I	GDGCHC	3 cut(s)	63, 126, 378
Bsp13I	TCCGGA	1 cut(s)	355
Bsp143I	GATC	5 cut(s)	115, 159, 345, 420, 526
BspACI	CCGC	4 cut(s)	6, 326, 430, 554
BspANI	GGCC	5 cut(s)	51, 221, 376, 497, 547
BspCNI	CTCAG	1 cut(s)	93
BspDI	ATCGAT	1 cut(s)	242
BspEI	TCCGGA	1 cut(s)	355
BspHI	TCATGA	1 cut(s)	112
BspLI	GGNNCC	7 cut(s)	60, 125, 285, 375, 376, 377, 534
BspPI	GGATC	1 cut(s)	353
BspT107I	GGYRCC	2 cut(s)	123, 283
BsrDI	GCAATG	2 cut(s)	66, 258
BsrI	ACTGG	1 cut(s)	281
BssECI	CCNNGG	1 cut(s)	549
BssMI	GATC	5 cut(s)	115, 159, 345, 420, 526
BssNI	GRCGYC	2 cut(s)	269, 284
BstACI	GRCGYC	2 cut(s)	269, 284
BstDEI	CTNAG	2 cut(s)	80, 492
BstDSI	CCRYGG	1 cut(s)	549
BstENI	CCTNNNNNAGG	1 cut(s)	527
BstF5I	GGATG	2 cut(s)	285, 323
BstH2I	RGCGCY	1 cut(s)	287
BstHHI	GCGC	1 cut(s)	286
BstKTI	GATC	5 cut(s)	118, 162, 348, 423, 529
BstMAI	GTCTC	3 cut(s)	80, 129, 411
BstMBI	GATC	5 cut(s)	115, 159, 345, 420, 526
BstSLI	GKGCMC	2 cut(s)	126, 378
Bsu15I	ATCGAT	1 cut(s)	242
Bsu36I	CCTNAGG	1 cut(s)	80
BsuI	GTATCC	1 cut(s)	305
BsuRI	GGCC	5 cut(s)	51, 221, 376, 497, 547
BsuTUI	ATCGAT	1 cut(s)	242
BtgI	CCRYGG	1 cut(s)	549
BtsCI	GGATG	2 cut(s)	285, 323
BtsIMutI	CAGTG	1 cut(s)	89
CciI	TCATGA	1 cut(s)	112
CfoI	GCGC	1 cut(s)	286
Cfr13I	GGNCC	4 cut(s)	374, 375, 532, 546
ClaI	ATCGAT	1 cut(s)	242
CseI	GACGC	1 cut(s)	277
Csp6I	GTAC	1 cut(s)	274
CspCI	CAANNNNNGTGG	2 cut(s)	211, 246
CviAII	CATG	3 cut(s)	100, 113, 368
CviJI	RGCY	9 cut(s)	51, 61, 146, 221, 353, 365, 376, 497, 547
CviKI_1	RGCY	9 cut(s)	51, 61, 146, 221, 353, 365, 376, 497, 547
CviQI	GTAC	1 cut(s)	274
DdeI	CTNAG	2 cut(s)	80, 492
DinI	GGCGCC	1 cut(s)	285
DpnI	GATC	5 cut(s)	117, 161, 347, 422, 528
DpnII	GATC	5 cut(s)	115, 159, 345, 420, 526
DraI	TTTAAA	1 cut(s)	502
EciI	GGCGGA	2 cut(s)	341, 569
Eco147I	AGGCCT	1 cut(s)	497
Eco24I	GRGCYC	2 cut(s)	63, 378
Eco47I	GGWCC	1 cut(s)	532
Eco81I	CCTNAGG	1 cut(s)	80
EcoNI	CCTNNNNNAGG	1 cut(s)	527
EcoO109I	RGGNCCY	3 cut(s)	374, 375, 532
EcoT38I	GRGCYC	2 cut(s)	63, 378
EgeI	GGCGCC	1 cut(s)	285
EheI	GGCGCC	1 cut(s)	285
FaeI	CATG	3 cut(s)	103, 116, 371
FaiI	YATR	8 cut(s)	26, 101, 114, 216, 332, 334, 369, 450
FaqI	GGGAC	1 cut(s)	280
FatI	CATG	3 cut(s)	99, 112, 367
FbaI	TGATCA	2 cut(s)	115, 526
FokI	GGATG	2 cut(s)	292, 330
FriOI	GRGCYC	2 cut(s)	63, 378
GlaI	GCGC	1 cut(s)	285
GsaI	CCCAGC	1 cut(s)	267
HaeII	RGCGCY	1 cut(s)	287
HaeIII	GGCC	5 cut(s)	51, 221, 376, 497, 547
HapII	CCGG	2 cut(s)	56, 356
HgaI	GACGC	1 cut(s)	277
HhaI	GCGC	1 cut(s)	286
Hin1I	GRCGYC	2 cut(s)	269, 284
Hin1II	CATG	3 cut(s)	103, 116, 371
Hin6I	GCGC	1 cut(s)	284
HinP1I	GCGC	1 cut(s)	284
HinfI	GANTC	3 cut(s)	164, 236, 244
HpaII	CCGG	2 cut(s)	56, 356
HphI	GGTGA	1 cut(s)	190
Hpy188I	TCNGA	1 cut(s)	445
Hpy188III	TCNNGA	5 cut(s)	113, 356, 424, 461, 530
Hpy99I	CGWCG	1 cut(s)	50
HpyAV	CCTTC	1 cut(s)	408
HpyCH4V	TGCA	4 cut(s)	66, 188, 321, 570
HpyF3I	CTNAG	2 cut(s)	80, 492
Hsp92I	GRCGYC	2 cut(s)	269, 284
Hsp92II	CATG	3 cut(s)	103, 116, 371
HspAI	GCGC	1 cut(s)	284
KasI	GGCGCC	1 cut(s)	283
Kpn2I	TCCGGA	1 cut(s)	355
Ksp22I	TGATCA	2 cut(s)	115, 526
Kzo9I	GATC	5 cut(s)	115, 159, 345, 420, 526
LmnI	GCTCC	3 cut(s)	21, 58, 358
LweI	GCATC	1 cut(s)	308
MaeIII	GTNAC	1 cut(s)	458
MalI	GATC	5 cut(s)	117, 161, 347, 422, 528
MboI	GATC	5 cut(s)	115, 159, 345, 420, 526
MboII	GAAGA	2 cut(s)	101, 430
MhlI	GDGCHC	3 cut(s)	63, 126, 378
MluCI	AATT	3 cut(s)	223, 359, 469
Mly113I	GGCGCC	1 cut(s)	284
MlyI	GAGTC	2 cut(s)	158, 245
MnlI	CCTC	7 cut(s)	43, 89, 137, 211, 405, 537, 552
MroI	TCCGGA	1 cut(s)	355
MseI	TTAA	2 cut(s)	251, 501
MspI	CCGG	2 cut(s)	56, 356
NarI	GGCGCC	1 cut(s)	284
NdeII	GATC	5 cut(s)	115, 159, 345, 420, 526
NlaIII	CATG	3 cut(s)	103, 116, 371
NlaIV	GGNNCC	7 cut(s)	60, 125, 285, 375, 376, 377, 534
NmuCI	GTSAC	1 cut(s)	458
PagI	TCATGA	1 cut(s)	112
PceI	AGGCCT	1 cut(s)	497
PfeI	GAWTC	1 cut(s)	244
PleI	GAGTC	2 cut(s)	158, 244
PluTI	GGCGCC	1 cut(s)	287
PpsI	GAGTC	2 cut(s)	158, 244
PpuMI	RGGWCCY	1 cut(s)	532
Psp5II	RGGWCCY	1 cut(s)	532
PspFI	CCCAGC	1 cut(s)	263
PspN4I	GGNNCC	7 cut(s)	60, 125, 285, 375, 376, 377, 534
PspOMI	GGGCCC	1 cut(s)	374
PspPI	GGNCC	4 cut(s)	374, 375, 532, 546
PspPPI	RGGWCCY	1 cut(s)	532
RsaI	GTAC	1 cut(s)	275
RsaNI	GTAC	1 cut(s)	274
SaqAI	TTAA	2 cut(s)	251, 501
Sau3AI	GATC	5 cut(s)	115, 159, 345, 420, 526
Sau96I	GGNCC	4 cut(s)	374, 375, 532, 546
SchI	GAGTC	2 cut(s)	158, 245
SduI	GDGCHC	3 cut(s)	63, 126, 378
SetI	ASST	3 cut(s)	129, 355, 563
SfaNI	GCATC	1 cut(s)	308
SfoI	GGCGCC	1 cut(s)	285
SinI	GGWCC	1 cut(s)	532
Sse9I	AATT	3 cut(s)	223, 359, 469
SseBI	AGGCCT	1 cut(s)	497
SsiI	CCGC	4 cut(s)	6, 326, 430, 554
SspDI	GGCGCC	1 cut(s)	283
StuI	AGGCCT	1 cut(s)	497
TaqI	TCGA	3 cut(s)	162, 227, 242
TasI	AATT	3 cut(s)	223, 359, 469
TfiI	GAWTC	1 cut(s)	244
Tru1I	TTAA	2 cut(s)	251, 501
Tru9I	TTAA	2 cut(s)	251, 501
TscAI	CASTG	1 cut(s)	96
TseFI	GTSAC	1 cut(s)	458
Tsp45I	GTSAC	1 cut(s)	458
TspDTI	ATGAA	2 cut(s)	101, 465
TspGWI	ACGGA	1 cut(s)	330
TspRI	CASTG	1 cut(s)	96
VpaK11BI	GGWCC	1 cut(s)	532
XagI	CCTNNNNNAGG	1 cut(s)	527

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.