Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004779

Physical Location & Seq

Genomic Coordinates Forward (+)

9217988 .. 9226280

Gene Structure 8293 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G16310.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4887 bp

ATGGATGGTAAGGAGAAGAAATCTGGTTCCAAGAGAGGATCTAAGGTTTTTCAGTTTGACGATGATGCTGATGATGATGAACCTATTGGATCTCTCTTAGAGATTATGAAGCATAAAAGTTCCAAGAAGGATAAGGTTGAGACAGAAAGTACTGGTAAACAGAGGCAGAAACAGGTTGTGGAAAAGAAGCTGAGTGCTTTGGGCAAGGATTCTGAAGATATGGATGACACATTAGCCAGTTTTAGGAAGAGGTTGAAGGGTAACAAGAAAGGTGTTGAATCAGGAACCTCAAGAGTTAGGAACCACGAGGGTGTTGATACTGTAACAAATTCTAATTTGAAACCAATTGAGGAAGCCAACAAAAACGAGGTGCAGAGTGTATTACTTAGGGAAAACGGTGCTTCTAATTCTATTCAAAAATGTGCTTCAGAAACTGGAACCCTCTTGCATAAGTTTTCTGGTAAAGATAAGGCAGCCTCTCCCAGTCATGAAAAAGTAGAAACAGTATCCAGTGAGAAGGAAGCAGATGTCTTTCATCAAATTACAAAGGAGGAATCCGAGATACCAATGTCAGAGAAGGCTGTGGAGCTATCCAGGGTGTCTGTCCCCATGCCAGATGTCCATGGCGAAGTTAATTGTACTATTGCTCCTGATAAGCACATACACTTGGGAGAGCCAACTTCAGAGTCCGGTTATTACCGAGAGAAGAATTTAGTTATGTGTGATTGTGGTACCCAATTTAATTTTGAGGATCGTTCCTTTGAGTCTAATACTCAGGTTACTCTCTGTCAAAAGTGCAAGTATTCTTCACACCATAATGCTTCTAATGGAGGTGGTATTCAAGTTAATACTCTAGAAGATGGAACTGCTCAAGCTTCGCCGGTTTCTATAATTCCCTGCGAAGATGAAAATTTCCGAGGGGATGCAATTTCACTACCTAATTCTGGGAAGCCATCGACCTTGCAACGCCCAGAGCGTATTGCTAAAAAGCGTAAGCTTGGAAACATGGTGTATGAAGGAGACGTGAAATGGGAGAATGAGCAAGGCTTTCTTGATTGTCAAAGTGACAAGTCCTTTAAGGGAAGCGACAAGTGTGGTTTTGTTCCATCTATTTCCAAGGAAATTGAAATTGGTAGAGCAGCTGCGGTAACAGCTGGACTTAAAGCCCAGTCAGTAAGTCCAATTGAGAAGATTATACTTAAAGAGGTGTTGAAGCGCAAAGGTAGCAATCAGGAGTACCTAGTTTGCAGGAACTCTATCTTAGGCCTGTGGAGTAAAAATGTCAGCCGAATCTTACCTGTCACTGAATGTGGTGTTACCGGAGGCCCTTCTGAGAGTGAATTGCCTTCAGCTTCCCTTATCAGAGAAGTCTATAAGTTTCTTGATCAGAGAGGTTATATAAATGCTGGAATTTCATCTGTGAATGGAAAGGCGGCATCTTCGACTAATCAAGACTATGATCTCCTCCAGGGGAGACAGCTTGAAGAAAGTTCTATGGCTTCTGTTGCAGATTCTGAAGAGGGAGTTGCTTTTATCCTTGGTCAGGTCAAAGCCGTTGAATCAACTAGTGAGGGTAAGAAATGTGCTCTCCAAAACGATGAAAGGGACTTGGTAGGATGTGCGACCTCGGAAATGTTGGAATCTATCAGCAAAAAATGCGAAGCAAGCATTATTGATGATAACAAACGTTCTGTGAGCATGAATGCTTTACAGGATAGTACTGCATCTAATGTTGAAAAGCATCCTGAAACATTTTCAGTAGCGAAGCCTGCTTTGTCTAGCACACTCTCCTCTGCACATAGTAATCAAATGAGAGGAAGGGACTGTGTTCCATGTGAGGTTATAGATGAGAAGAAAGTTATAGTAATTGGAGCTGGTCCTGCTGGATTAACAGCAGCACGTCATTTACAGCGCCAGGGTTTTTCTGTAACCGTTCTTGAGGCAAGGAGTAGAGTAGGTGGTCGTGTATTTACAGACCGGTCGTCTCTTTCAGTTCCTGTGGATCTTGGGGCTAGCATAATTACAGGCATTGAGGCTGATGTGCCATCTGAAAGAATGCCAGATCCATCGGTATTGGTCTGTAACCAATTAGGTCTGGAGTTGAGCGTGTTACATGGATTCTGTCCTCTTTATGATACTGTAACAGGGAAAAAGGTTCCTGCAGAATTAGATGATGCTCTACAAGCAGAGTTCAACAGTCTAATTGACGATGTAGATTTGCTTGTTGAGGAAATAGGCAAGGAAAGAGCAAATAAAATGTCTCTTGAGGATGGTCTAGAATATGGCCTTCAACGGCTGAGAATGCCACATGACAAGGTGAACATTGACAAATTTGGGCTTCTCAATTCAAGCTCAAAAACGGGCATCAGAGGTCCCTTTATGCAGGATGAAAGCTGGAAAGATGATTTTTTGAATCCTTTGGAGCGAAGAGTTATGAATTGGCATTTTGCTCACACAGAATATGGTTGTGCTGCTGTCCTCAAGGAAGTTTCGCTTCCTCACTGGAATCAAGATGAGTTTTATGGCGGGTTTGGAGGGCCTCATGCTATGATTAAGGGTGGTTATAGCCGAGTTGTTGAGTCGCTTGCAGAAGGACTGGACATTCACTTAAACAAAATAGTTTCAGATGTATCTTATGTCTCTGATGTATCTGCCATGGATAACAGCAAGCATAAAGTCAGAGTTAGTACATCAAATGGCTGTGAGTATCTTGGAGATGCTGTTCTGGTAACTGTTCCACTTGGATGCTTGAAAGCAGAAACTATTAAGTTTTCACCACCCTTGCCGGACTGGAAATATGCGTCAATCAAACAACTTGGTTTTGGAGTTCTAAATAAAGTTGTTTTGGAGTTCCCAACGGTATTTTGGGATGATAGTGTTGATTACTTTGGGGCAACTGCTGAGGAAACAGATCTAAGAGGTGAGTGCTTTATGTTTTGGAATGTCAAAAAAACTGTTGGTGCTCCTGTCCTGATAGCTTTGGTGGTTGGGAAGGCTGCTTTTGAATATACAAACAAGAGTAAGTCTGAGCACGTGAACCATGCAATGATGGTTCTTCGGAAGCTTTTTGGTGGGGATCTGGTTCCTGATCCTGTCGCCTCGGTAGTTACTGACTGGGGCACTGATCCTTACAGTTATGGTGCCTACTCGTATGTTGCTATTGGTGCTTCTGGTGAAGATTATGATGTATTGGGAAGGCCTGTTCAGAATTGTTTGTTTTTTGCTGGTGAGGCAACATGCAAAGAGCATCCTGACACTGTTGGTGGTGCAATGATGACTGGAGTCCGGGAAGCTGTGCGTATAATTGATATACTTAGAAGTGGAAATGATTACACAGCCGAAATAGAAACACTAGAAAAAGCGCAGAGGAAATCTGTACCTGTAAGGGATGAAGTCAGAGACCTAATAAAGAGGCTGGAAGTTGTTGAGCTGTCTAATGTGCTAGCCAGGCAATCATTGCTACGAAACATGTTCTTCTCTGCCAAAACAACTGTCGGGCGTTTGCATTTAGCCAAGGAGTTGCTTAACCTACCTGGTGAAACCTTGAAATCCTTTGCAGGTACAAAAGAAGGGCTTGCAGTGCTGAACTCTTGGATCCTGGATTCGATGGGTAAGAATGGAACCCAGCTTTTACGTCACTGTGTACATATTCTTGTTCGAGTTACGAGTGACCTCTTTGCCTTGAGGCTATCAGGTATTGGGAAGACTGTGAAAGAAAAGGTTTGTGCACACACGAGCCGTGATATTCGTGCCATTGCAAGTCAGCTTGTTAATGTGTGGCTGGATCTATACCGGAAAGAAAAAGCTAATAGTGGAAAGAAATCGTTGAGACAAGCGAATACTACAAACACCTCTAGAATAAGAAGAAAACTGAATAGTCCGGACACAGACAGTAAGGGAAAGCTGAGCAATGGCAACGATGTGAAAACAGATGAAGAGTTTGAGGACAACCAGCTACCTATGTCAGAGGAAGAGAAGGCTGTGTTTGCTGAAGCTGAGGCGGCTCGTGCAGCAGCAGAAGCAGCTGCAAAGGCATTTTCTGAGGCCTATCATAATACTTCATTGCAGCTTCCTAAGATCCCCTCATTTCATAAGTTTGCCAGGCGAGAGCAGTATGCAAAGATGGACGAATCTGATTTCAGGAAAAAGTTTCCTGGAAATGTCTTAGGAAGACAAGATTGTATGTCAGAGATTGACTCGAGGAACTGCAAAGTTAGGGACTGGTATGATTTTCCTGCCTCGTGCCTTGACCTTGACAGTGCAAGGATTCCAGTTGATAACTATTCACAGCCTAGCCATTCGAATGAGCTTGTATCTCATTCGAAGTTCAGAGAATGTTCTGGAGAAAGTGTGGCTGCGGATACCAGTTTCTTAACTGGGGCATGGGTTGATACTGGTGGTAGTAGCGATGGTTTCAAGGATTCTCAGGCTATAGATAGATGGCAATCTCAAGCTGCTGCTGCTGATCCTGAATTTTTCAATCGTACTTTGCATATAAAGGATGAAGAAGATTCGATTGCTTGTTCGACTGGCCCTCCTAGTTGGAAGCATGACCAACGAGCGAATGAATGTTCCGTGTCACAGGTTACAGTGAATAAAGAGCCACATAAAAATCATATCCGGAGTGCAGATCGTTTGAAACAGGGAGTTGTAGATTTTGTTGCATCGTTGCTTATGGCCCCGTATAGAGCAAAGAAAATTGATAGAGATGTATACAAGTCAATTATGAAGAAGACAGCAACAAAGGTTATGCAACATACAACAGATGTGGAGAAAGCTATGGCTGTTACACAGTTCCTCGACTCAAAGCGGAAAAATAAGATTCGTGACTTTGTGGACAAACAAGTTGACAAGTACATGGTGATACCTCAAGTTCCAAAACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006476 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016575 GO:0018022 GO:0018193 GO:0018205 GO:0019538 GO:0022622 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0051276 GO:0051568 GO:0071704 GO:0071840 GO:0098732 GO:0099402 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Amino_oxidase SWIRM

Protein Analysis

1628

Amino Acids

179.4

Weight (kDa)

6.08

Isoelectric Point (pI)

40.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	390 - 468	1.1e-15	SWIRM domain
Thi4	PF01946	617 - 655	2.8e-06	Thi4 family
Pyr_redox_2	PF07992	618 - 655	3.7e-06	Pyridine nucleotide-disulphide oxidoreductase
DAO	PF01266	619 - 653	5.1e-08	FAD dependent oxidoreductase
FAD_binding_2	PF00890	620 - 656	9e-06	FAD binding domain
NAD_binding_8	PF13450	622 - 678	1.3e-14	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	628 - 1102	5.8e-97	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004779)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16310 AT4G16310 AT4G16310 AT4G16310 AT4G16310
fragaria_vesca	FvH4_2g39110 FvH4_2g39110 FvH4_2g39110
malus_domestica	MD08G1017300.v1.1 MD15G1016200.v1.1 MD15G1018300.v1.1
prunus_persica	Prupe.1G370000_v2.0.a1 Prupe.1G370000_v2.0.a1 Prupe.1G370000_v2.0.a1 Prupe.1G370000_v2.0.a1
pyrus_communis	pycom08g01510 pycom15g01410 pycom15g01420
rosa_chinensis	RchiOBHm_Chr6g0302221
rosa_laevigata	RLG00000011185
rosa_multiflora	Rmu_sc0003633.1_g000002
rosa_roxburghii	Rroxscaffold_7G00165980
rosa_rugosa	Rorug06G0313100 Rorug06G0313200 Rorug06G0313300 Rorug06G0313300
rosa_samantha	Rh6AG425800 Rh6BG476500 Rh6CG438600 Rh6DG425700
rosa_wichuraiana	Rw6G036880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	3548
Acc65I	GGTACC	1 cut(s)	731
AccB1I	GGYRCC	2 cut(s)	731, 3140
AccI	GTMKAC	1 cut(s)	4713
AccIII	TCCGGA	2 cut(s)	3880, 4620
AciI	CCGC	6 cut(s)	1145, 1433, 2526, 4001, 4358, 4810
AclI	AACGTT	1 cut(s)	1687
AcsI	RAATTY	6 cut(s)	328, 709, 910, 1410, 2330, 4472
AcuI	CTGAAG	6 cut(s)	234, 411, 666, 1332, 1536, 4011
AcvI	CACGTG	1 cut(s)	3034
AfiI	CCNNNNNNNGG	3 cut(s)	243, 944, 1543
AflIII	ACRYGT	1 cut(s)	3468
AgeI	ACCGGT	1 cut(s)	1977
AhdI	GACNNNNNGTC	1 cut(s)	1981
AhlI	ACTAGT	1 cut(s)	1565
AjiI	CACGTC	2 cut(s)	1024, 1901
AjnI	CCWGG	8 cut(s)	593, 1467, 1914, 3446, 3532, 3597, 4100, 4153
AjuI	GAANNNNNNNTTGG	2 cut(s)	1113, 1145
AleI	CACNNNNGTG	1 cut(s)	309
AloI	GAACNNNNNNTCC	4 cut(s)	2706, 2738, 3186, 3218
Alw21I	GWGCWC	4 cut(s)	1588, 2965, 3033, 3730
Alw26I	GTCTC	8 cut(s)	134, 1014, 1468, 1989, 2265, 2644, 3393, 3823
Alw44I	GTGCAC	1 cut(s)	3726
AlwNI	CAGNNNCTG	3 cut(s)	434, 1514, 1997
Ama87I	CYCGRG	1 cut(s)	4198
Aor13HI	TCCGGA	2 cut(s)	3880, 4620
AoxI	GGCC	8 cut(s)	1264, 1324, 2284, 2537, 3197, 4044, 4531, 4677
ApaLI	GTGCAC	1 cut(s)	3726
ApoI	RAATTY	6 cut(s)	328, 709, 910, 1410, 2330, 4472
ArsI	GACNNNNNNTTYG	4 cut(s)	2243, 2275, 3477, 3509
AsiGI	ACCGGT	1 cut(s)	1977
Asp718I	GGTACC	1 cut(s)	731
AspLEI	GCGC	3 cut(s)	1218, 1914, 3364
AspS9I	GGNCC	6 cut(s)	1325, 1877, 2372, 2537, 4532, 4678
AsuC2I	CCSGG	1 cut(s)	3287
AsuHPI	GGTGA	7 cut(s)	2329, 2766, 2933, 3185, 3239, 3548, 4873
AsuII	TTCGAA	2 cut(s)	4301, 4322
AsuNHI	GCTAGC	2 cut(s)	2012, 3442
AvaI	CYCGRG	1 cut(s)	4198
AvaII	GGWCC	2 cut(s)	1877, 2372
BaeGI	GKGCMC	2 cut(s)	3122, 3730
BaeI	ACNNNNGTAYC	2 cut(s)	554, 587
BamHI	GGATCC	1 cut(s)	3594
BanI	GGYRCC	2 cut(s)	731, 3140
BauI	CACGAG	4 cut(s)	305, 3733, 4005, 4240
BbrPI	CACGTG	1 cut(s)	3034
BbsI	GAAGAC	3 cut(s)	3710, 4177, 4739
Bbv12I	GWGCWC	4 cut(s)	1588, 2965, 3033, 3730
BbvCI	CCTCAGC	2 cut(s)	2901, 3996
BceAI	ACGGC	3 cut(s)	1538, 2309, 3723
BciT130I	CCWGG	8 cut(s)	595, 1469, 1916, 3448, 3534, 3599, 4102, 4155
BciVI	GTATCC	2 cut(s)	517, 4354
BclI	TGATCA	1 cut(s)	1384
BcnI	CCSGG	1 cut(s)	3287
BcoDI	GTCTC	8 cut(s)	134, 1014, 1468, 1989, 2265, 2644, 3393, 3823
BcuI	ACTAGT	1 cut(s)	1565
BfmI	CTRYAG	2 cut(s)	2160, 4431
BfoI	RGCGCY	1 cut(s)	1915
BfuAI	ACCTGC	1 cut(s)	3548
BfuI	GTATCC	2 cut(s)	517, 4354
BglII	AGATCT	1 cut(s)	2911
BlpI	GCTNAGC	1 cut(s)	3905
BmcAI	AGTACT	2 cut(s)	151, 1720
Bme1390I	CCNGG	9 cut(s)	595, 1469, 1916, 3287, 3448, 3534, 3599, 4102, 4155
Bme18I	GGWCC	2 cut(s)	1877, 2372
BmeRI	GACNNNNNGTC	1 cut(s)	1981
BmeT110I	CYCGRG	1 cut(s)	4198
BmgBI	CACGTC	2 cut(s)	1024, 1901
BmgT120I	GGNCC	6 cut(s)	1325, 1877, 2372, 2537, 4532, 4678
BmrFI	CCNGG	9 cut(s)	595, 1469, 1916, 3287, 3448, 3534, 3599, 4102, 4155
BmrI	ACTGGG	4 cut(s)	477, 1162, 3124, 4386
BmtI	GCTAGC	2 cut(s)	2016, 3446
BmuI	ACTGGG	4 cut(s)	477, 1162, 3124, 4386
BoxI	GACNNNNGTC	1 cut(s)	3281
BpiI	GAAGAC	3 cut(s)	3710, 4177, 4739
BplI	GAGNNNNNCTC	2 cut(s)	4181, 4213
BpmI	CTGGAG	4 cut(s)	1451, 2117, 3300, 4362
Bpu10I	CCTNAGC	2 cut(s)	2901, 3996
Bpu1102I	GCTNAGC	1 cut(s)	3905
Bpu14I	TTCGAA	2 cut(s)	4301, 4322
BpuEI	CTTGAG	8 cut(s)	274, 855, 1958, 2285, 2465, 3703, 4434, 4854
BpuMI	CCSGG	1 cut(s)	3287
BsaAI	YACGTR	1 cut(s)	3034
BsaBI	GATNNNNATC	1 cut(s)	4444
BsaI	GGTCTC	1 cut(s)	3393
BsaWI	WCCGGW	6 cut(s)	689, 1319, 1977, 3792, 3880, 4620
BsaXI	ACNNNNNCTCC	8 cut(s)	631, 661, 2706, 2736, 4335, 4365, 4519, 4549
Bsc4I	CCNNNNNNNGG	3 cut(s)	243, 944, 1543
Bse118I	RCCGGY	2 cut(s)	880, 1977
Bse3DI	GCAATG	6 cut(s)	3051, 3276, 3455, 3753, 3916, 4061
Bse8I	GATNNNNATC	1 cut(s)	4444
BseAI	TCCGGA	2 cut(s)	3880, 4620
BseBI	CCWGG	8 cut(s)	595, 1469, 1916, 3448, 3534, 3599, 4102, 4155
BseJI	GATNNNNATC	1 cut(s)	4444
BseLI	CCNNNNNNNGG	3 cut(s)	243, 944, 1543
BseMI	GCAATG	6 cut(s)	3051, 3276, 3455, 3753, 3916, 4061
BseRI	GAGGAG	2 cut(s)	1454, 1780
BseSI	GKGCMC	2 cut(s)	3122, 3730
BseYI	CCCAGC	1 cut(s)	3624
BsgI	GTGCAG	4 cut(s)	392, 1779, 4029, 4647
Bsh1285I	CGRYCG	1 cut(s)	1982
BshFI	GGCC	8 cut(s)	1266, 1326, 2286, 2539, 3199, 4046, 4533, 4679
BshNI	GGYRCC	2 cut(s)	731, 3140
BshTI	ACCGGT	1 cut(s)	1977
BsiEI	CGRYCG	1 cut(s)	1982
BsiHKAI	GWGCWC	4 cut(s)	1588, 2965, 3033, 3730
BsiHKCI	CYCGRG	1 cut(s)	4198
BsiSI	CCGG	9 cut(s)	690, 881, 1320, 1978, 2786, 3286, 3793, 3881, 4621
BslFI	GGGAC	5 cut(s)	590, 1619, 1835, 2358, 4232
BslI	CCNNNNNNNGG	3 cut(s)	243, 944, 1543
BsmAI	GTCTC	8 cut(s)	134, 1014, 1468, 1989, 2265, 2644, 3393, 3823
BsmBI	CGTCTC	2 cut(s)	1014, 1989
BsmFI	GGGAC	5 cut(s)	590, 1619, 1835, 2358, 4232
BsmI	GAATGC	3 cut(s)	1708, 2061, 2307
BsnI	GGCC	8 cut(s)	1266, 1326, 2286, 2539, 3199, 4046, 4533, 4679
Bso31I	GGTCTC	1 cut(s)	3393
BsoBI	CYCGRG	1 cut(s)	4198
Bsp119I	TTCGAA	2 cut(s)	4301, 4322
Bsp1286I	GDGCHC	5 cut(s)	1588, 2965, 3033, 3122, 3730
Bsp13I	TCCGGA	2 cut(s)	3880, 4620
Bsp1407I	TGTACA	1 cut(s)	3643
Bsp1720I	GCTNAGC	1 cut(s)	3905
Bsp19I	CCATGG	2 cut(s)	622, 2655
BspACI	CCGC	6 cut(s)	1145, 1433, 2526, 4001, 4358, 4810
BspANI	GGCC	8 cut(s)	1266, 1326, 2286, 2539, 3199, 4046, 4533, 4679
BspEI	TCCGGA	2 cut(s)	3880, 4620
BspHI	TCATGA	1 cut(s)	487
BspMAI	CTGCAG	1 cut(s)	2164
BspMI	ACCTGC	1 cut(s)	3548
BspOI	GCTAGC	2 cut(s)	2016, 3446
BspT104I	TTCGAA	2 cut(s)	4301, 4322
BspT107I	GGYRCC	2 cut(s)	731, 3140
BspTNI	GGTCTC	1 cut(s)	3393
BsrDI	GCAATG	6 cut(s)	3051, 3276, 3455, 3753, 3916, 4061
BsrFI	RCCGGY	2 cut(s)	880, 1977
BsrGI	TGTACA	1 cut(s)	3643
BssAI	RCCGGY	2 cut(s)	880, 1977
BssNAI	GTATAC	1 cut(s)	4714
BssSI	CACGAG	4 cut(s)	305, 3733, 4005, 4240
BssT1I	CCWWGG	5 cut(s)	622, 1116, 1537, 2655, 3513
Bst1107I	GTATAC	1 cut(s)	4714
Bst2BI	CACGAG	4 cut(s)	305, 3733, 4005, 4240
Bst2UI	CCWGG	8 cut(s)	595, 1469, 1916, 3448, 3534, 3599, 4102, 4155
Bst6I	CTCTTC	5 cut(s)	242, 1512, 2422, 3930, 3966
BstAPI	GCANNNNNTGC	2 cut(s)	1656, 3457
BstAUI	TGTACA	1 cut(s)	3643
BstBAI	YACGTR	1 cut(s)	3034
BstBI	TTCGAA	2 cut(s)	4301, 4322
BstC8I	GCNNGC	7 cut(s)	1666, 1770, 2014, 2586, 2669, 3444, 3576
BstDSI	CCRYGG	2 cut(s)	622, 2655
BstENI	CCTNNNNNAGG	1 cut(s)	1541
BstH2I	RGCGCY	1 cut(s)	1915
BstHHI	GCGC	3 cut(s)	1218, 1914, 3364
BstMAI	GTCTC	8 cut(s)	134, 1014, 1468, 1989, 2265, 2644, 3393, 3823
BstMCI	CGRYCG	1 cut(s)	1982
BstNI	CCWGG	8 cut(s)	595, 1469, 1916, 3448, 3534, 3599, 4102, 4155
BstNSI	RCATGY	2 cut(s)	3240, 3472
BstPAI	GACNNNNGTC	1 cut(s)	3281
BstSCI	CCNGG	9 cut(s)	593, 1467, 1914, 3285, 3446, 3532, 3597, 4100, 4153
BstSFI	CTRYAG	2 cut(s)	2160, 4431
BstSLI	GKGCMC	2 cut(s)	3122, 3730
BstV2I	GAAGAC	3 cut(s)	3710, 4177, 4739
BstX2I	RGATCY	9 cut(s)	38, 89, 2002, 2062, 2911, 3076, 3594, 3784, 4077
BstYI	RGATCY	9 cut(s)	38, 89, 2002, 2062, 2911, 3076, 3594, 3784, 4077
BstZ17I	GTATAC	1 cut(s)	4714
BsuI	GTATCC	2 cut(s)	517, 4354
BsuRI	GGCC	8 cut(s)	1266, 1326, 2286, 2539, 3199, 4046, 4533, 4679
BtgI	CCRYGG	2 cut(s)	622, 2655
BtgZI	GCGATG	1 cut(s)	4422
BtrI	CACGTC	2 cut(s)	1024, 1901
BtsI	GCAGTG	1 cut(s)	3585
BtsIMutI	CAGTG	9 cut(s)	517, 1302, 2500, 3120, 3255, 3585, 3637, 4264, 4596
BveI	ACCTGC	1 cut(s)	3548
Cac8I	GCNNGC	7 cut(s)	1666, 1770, 2014, 2586, 2669, 3444, 3576
CaiI	CAGNNNCTG	3 cut(s)	434, 1514, 1997
CciI	TCATGA	1 cut(s)	487
CfoI	GCGC	3 cut(s)	1218, 1914, 3364
Cfr10I	RCCGGY	2 cut(s)	880, 1977
Cfr13I	GGNCC	6 cut(s)	1325, 1877, 2372, 2537, 4532, 4678
CseI	GACGC	1 cut(s)	2790
CsiI	ACCWGGT	1 cut(s)	3532
CspAI	ACCGGT	1 cut(s)	1977
CspCI	CAANNNNNGTGG	2 cut(s)	4749, 4784
DriI	GACNNNNNGTC	1 cut(s)	1981
Eam1104I	CTCTTC	5 cut(s)	242, 1512, 2422, 3930, 3966
Eam1105I	GACNNNNNGTC	1 cut(s)	1981
EarI	CTCTTC	5 cut(s)	242, 1512, 2422, 3930, 3966
Eco130I	CCWWGG	5 cut(s)	622, 1116, 1537, 2655, 3513
Eco147I	AGGCCT	3 cut(s)	1266, 3199, 4046
Eco31I	GGTCTC	1 cut(s)	3393
Eco47I	GGWCC	2 cut(s)	1877, 2372
Eco57I	CTGAAG	6 cut(s)	234, 411, 666, 1332, 1536, 4011
Eco72I	CACGTG	1 cut(s)	3034
Eco88I	CYCGRG	1 cut(s)	4198
EcoNI	CCTNNNNNAGG	1 cut(s)	1541
EcoO109I	RGGNCCY	3 cut(s)	1325, 2372, 2537
EcoRII	CCWGG	8 cut(s)	593, 1467, 1914, 3446, 3532, 3597, 4100, 4153
EcoT14I	CCWWGG	5 cut(s)	622, 1116, 1537, 2655, 3513
ErhI	CCWWGG	5 cut(s)	622, 1116, 1537, 2655, 3513
Esp3I	CGTCTC	2 cut(s)	1014, 1989
FalI	AAGNNNNNCTT	6 cut(s)	1035, 1067, 2478, 2510, 3558, 3590
FaqI	GGGAC	5 cut(s)	590, 1619, 1835, 2358, 4232
FauI	CCCGC	1 cut(s)	2519
FbaI	TGATCA	1 cut(s)	1384
FblI	GTMKAC	1 cut(s)	4713
GlaI	GCGC	3 cut(s)	1217, 1913, 3363
GsaI	CCCAGC	1 cut(s)	3628
GsuI	CTGGAG	4 cut(s)	1451, 2117, 3300, 4362
HaeII	RGCGCY	1 cut(s)	1915
HaeIII	GGCC	8 cut(s)	1266, 1326, 2286, 2539, 3199, 4046, 4533, 4679
HapII	CCGG	9 cut(s)	690, 881, 1320, 1978, 2786, 3286, 3793, 3881, 4621
HgaI	GACGC	1 cut(s)	2790
HhaI	GCGC	3 cut(s)	1218, 1914, 3364
Hin6I	GCGC	3 cut(s)	1216, 1912, 3362
HinP1I	GCGC	3 cut(s)	1216, 1912, 3362
HincII	GTYRAC	1 cut(s)	4849
HindII	GTYRAC	1 cut(s)	4849
HindIII	AAGCTT	3 cut(s)	873, 995, 3062
HpaII	CCGG	9 cut(s)	690, 881, 1320, 1978, 2786, 3286, 3793, 3881, 4621
HphI	GGTGA	7 cut(s)	2329, 2766, 2933, 3185, 3239, 3548, 4873
Hpy166II	GTNNAC	8 cut(s)	158, 2320, 3037, 3644, 3728, 4714, 4837, 4849
Hpy8I	GTNNAC	8 cut(s)	158, 2320, 3037, 3644, 3728, 4714, 4837, 4849
HpyCH4IV	ACGT	5 cut(s)	1023, 1687, 1900, 3033, 3634
HpySE526I	ACGT	5 cut(s)	1023, 1687, 1900, 3033, 3634
HspAI	GCGC	3 cut(s)	1216, 1912, 3362
Kpn2I	TCCGGA	2 cut(s)	3880, 4620
KpnI	GGTACC	1 cut(s)	735
Ksp22I	TGATCA	1 cut(s)	1384
LmnI	GCTCC	5 cut(s)	586, 652, 1871, 2422, 2968
MabI	ACCWGGT	1 cut(s)	3532
MaeII	ACGT	5 cut(s)	1023, 1687, 1900, 3033, 3634
MfeI	CAATTG	2 cut(s)	345, 1182
MflI	RGATCY	9 cut(s)	38, 89, 2002, 2062, 2911, 3076, 3594, 3784, 4077
MhlI	GDGCHC	5 cut(s)	1588, 2965, 3033, 3122, 3730
MlyI	GAGTC	6 cut(s)	695, 773, 2588, 3291, 4190, 4796
MmeI	TCCRAC	2 cut(s)	1617, 4523
MroI	TCCGGA	2 cut(s)	3880, 4620
MslI	CAYNNNNRTG	4 cut(s)	309, 816, 2743, 4302
MspA1I	CMGCKG	3 cut(s)	1142, 1154, 4025
MspI	CCGG	9 cut(s)	690, 881, 1320, 1978, 2786, 3286, 3793, 3881, 4621
MspR9I	CCNGG	9 cut(s)	595, 1469, 1916, 3287, 3448, 3534, 3599, 4102, 4155
MunI	CAATTG	2 cut(s)	345, 1182
Mva1269I	GAATGC	3 cut(s)	1708, 2061, 2307
MvaI	CCWGG	8 cut(s)	595, 1469, 1916, 3448, 3534, 3599, 4102, 4155
NciI	CCSGG	1 cut(s)	3287
NcoI	CCATGG	2 cut(s)	622, 2655
NheI	GCTAGC	2 cut(s)	2012, 3442
NmeAIII	GCCGAG	1 cut(s)	2594
NmuCI	GTSAC	6 cut(s)	1064, 1300, 3635, 3668, 4578, 4826
NspI	RCATGY	2 cut(s)	3240, 3472
NspV	TTCGAA	2 cut(s)	4301, 4322
OliI	CACNNNNGTG	1 cut(s)	309
PaeR7I	CTCGAG	1 cut(s)	4198
PagI	TCATGA	1 cut(s)	487
PceI	AGGCCT	3 cut(s)	1266, 3199, 4046
PciI	ACATGT	1 cut(s)	3468
PcsI	WCGNNNNNNNCGW	1 cut(s)	973
PctI	GAATGC	3 cut(s)	1708, 2061, 2307
PfoI	TCCNGGA	3 cut(s)	3285, 3597, 4153
PinAI	ACCGGT	1 cut(s)	1977
PleI	GAGTC	6 cut(s)	694, 772, 2587, 3290, 4190, 4796
PmaCI	CACGTG	1 cut(s)	3034
PmlI	CACGTG	1 cut(s)	3034
PpsI	GAGTC	6 cut(s)	694, 772, 2587, 3290, 4190, 4796
Ppu21I	YACGTR	1 cut(s)	3034
PpuMI	RGGWCCY	1 cut(s)	2372
PscI	ACATGT	1 cut(s)	3468
PshAI	GACNNNNGTC	1 cut(s)	3281
Psp1406I	AACGTT	1 cut(s)	1687
Psp5II	RGGWCCY	1 cut(s)	2372
Psp6I	CCWGG	8 cut(s)	593, 1467, 1914, 3446, 3532, 3597, 4100, 4153
PspCI	CACGTG	1 cut(s)	3034
PspFI	CCCAGC	1 cut(s)	3624
PspGI	CCWGG	8 cut(s)	593, 1467, 1914, 3446, 3532, 3597, 4100, 4153
PspPI	GGNCC	6 cut(s)	1325, 1877, 2372, 2537, 4532, 4678
PspPPI	RGGWCCY	1 cut(s)	2372
PspXI	VCTCGAGB	1 cut(s)	4198
PstI	CTGCAG	1 cut(s)	2164
PstNI	CAGNNNCTG	3 cut(s)	434, 1514, 1997
PsuI	RGATCY	9 cut(s)	38, 89, 2002, 2062, 2911, 3076, 3594, 3784, 4077
PvuII	CAGCTG	3 cut(s)	1142, 1154, 4025
RseI	CAYNNNNRTG	4 cut(s)	309, 816, 2743, 4302
Sau96I	GGNCC	6 cut(s)	1325, 1877, 2372, 2537, 4532, 4678
ScaI	AGTACT	2 cut(s)	151, 1720
SchI	GAGTC	6 cut(s)	695, 773, 2588, 3291, 4190, 4796
ScrFI	CCNGG	9 cut(s)	595, 1469, 1916, 3287, 3448, 3534, 3599, 4102, 4155
SduI	GDGCHC	5 cut(s)	1588, 2965, 3033, 3122, 3730
SexAI	ACCWGGT	1 cut(s)	3532
SfcI	CTRYAG	2 cut(s)	2160, 4431
Sfr274I	CTCGAG	1 cut(s)	4198
SfuI	TTCGAA	2 cut(s)	4301, 4322
SinI	GGWCC	2 cut(s)	1877, 2372
SlaI	CTCGAG	1 cut(s)	4198
SmiMI	CAYNNNNRTG	4 cut(s)	309, 816, 2743, 4302
SmlI	CTYRAG	9 cut(s)	289, 870, 1937, 2264, 2480, 3682, 4198, 4449, 4869
SmoI	CTYRAG	9 cut(s)	289, 870, 1937, 2264, 2480, 3682, 4198, 4449, 4869
SpeI	ACTAGT	1 cut(s)	1565
SseBI	AGGCCT	3 cut(s)	1266, 3199, 4046
SsiI	CCGC	6 cut(s)	1145, 1433, 2526, 4001, 4358, 4810
StuI	AGGCCT	3 cut(s)	1266, 3199, 4046
StyD4I	CCNGG	9 cut(s)	593, 1467, 1914, 3285, 3446, 3532, 3597, 4100, 4153
StyI	CCWWGG	5 cut(s)	622, 1116, 1537, 2655, 3513
TaiI	ACGT	5 cut(s)	1026, 1690, 1903, 3036, 3637
TatI	WGTACW	6 cut(s)	149, 638, 1718, 2687, 3643, 4854
TauI	GCSGC	2 cut(s)	1436, 4004
TscAI	CASTG	9 cut(s)	517, 1309, 2507, 3127, 3262, 3585, 3644, 4264, 4596
TseFI	GTSAC	6 cut(s)	1064, 1300, 3635, 3668, 4578, 4826
Tsp45I	GTSAC	6 cut(s)	1064, 1300, 3635, 3668, 4578, 4826
TspGWI	ACGGA	1 cut(s)	4564
TspRI	CASTG	9 cut(s)	517, 1309, 2507, 3127, 3262, 3585, 3644, 4264, 4596
VneI	GTGCAC	1 cut(s)	3726
VpaK11BI	GGWCC	2 cut(s)	1877, 2372
XagI	CCTNNNNNAGG	1 cut(s)	1541
XapI	RAATTY	6 cut(s)	328, 709, 910, 1410, 2330, 4472
XbaI	TCTAGA	3 cut(s)	853, 2275, 3854
XceI	RCATGY	2 cut(s)	3240, 3472
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2862
XhoI	CTCGAG	1 cut(s)	4198
XmiI	GTMKAC	1 cut(s)	4713
ZrmI	AGTACT	2 cut(s)	151, 1720

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.