Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0004779

Physical Location & Seq

Genomic Coordinates Forward (+)

952195 .. 960029

Gene Structure 7835 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1016200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5337 bp

ATGGTTGACAAAATGGATGGGGAGGAGAAGAAGTCCGGCCTTCAGATACGATCGAAGTTTGTCAAGGCGAATATGGTTGATTCTGAGGATGATGAGCCAATTGGGTCACTTTTGAAGTTGAAGAGGCAGAGAAACCTTAAGAAGGTTAAGGGTGGCGGTGAAAGGGGCAAGATGGTTGACGATGAAGAAGAGAATTTGGGGGGCCTGGATGATACTTTGGCTAGTTTGAGGAAGAAGTTGAAGGGTCCCAAGAAAGATTATGGGACTGGAACTATGAGGGGAAGGAGTTTTGCTTTGGATGGTGTACAGTCTGTGGATCAGTCCTCTAATGAGCATGTGGACGACAGGGGTTTGGATGGAAAATCAGCGTCAAGGGTTTTAGAGAAAGATCCTGTTATGGGTGATGATGGATCTGATGTGACTATCAATATAGAGGTAGAAAACAAGCTTAATGGAAAGGGAAAGAGACCCAAGATTTCAGGGTCTCTGGGATTTGGGGAAGGTTCTAATTGCCTTTTGGATCATCATCCGGAAGATTCATTATCAGCATTTTCCCGGAAGTCACAATCTGGTTTGATTATGAATTCTCGTGCCTCTTCAATTCCCAAAGAGAAGAGTGGTTCTAAGGTTTTGGAGGATGGGTTGAACACCATGCCTTTGGCTGGTTCAAATCAATTGGATTCAGCCTCTGATCAGTGTAAGGAAGATGAAAGTCAAAGTTTTGATGACAGAGCCTCTAACCGTCACAGGGAAAATCAAGAGACATTCAATGATAAAAAGCATAAAAGGCCCTACAAAGTCGTTTCAGAAGATCGAGTTCCTCTCTACTCACATTCAGGATTTGATTCCAAATTGATTAAAAATGAAGCCATAGTGGATCCTTCTGGTTCAAATTTTCAAGAGGGACCATGCAGCTCAGATGAAGTTAATGATGGAGACAAAAAACATTTGACACAGCAAATGCAAACTTTTGAGGATGGATTGAAGAACTGCTCTATGGGAGGTAATTGTAATGGTCTAATTTCTTACACTAAGAATCTTGGCCTTGCTTCTGGTCCTTTGCGGGATGAAAATGATGTTCCAAATCATGATCATCTTATCACTAGTGAAGAGGCTGATGAAAATGAGAGTTTCCCAGAAGACACAGTATCTCTACCAGATGTTGAAAACAAAAACACTAAGCTATCAGCTGTCCAGCGTGTGGGGCGCATTGTTAGAAAGCGTAGGCATGGAGACATGGCTTATGAGGGGGATGCTGATTGGGAGGTATTGATAAATGATCAAAGTTTGAACAGTGACAATTTGAGAGTGAAGTTTGATTCCTCTTCAAGTATCGGTACAGAGTCTGAAAGTGGTGAGGCTGCAGCAGTGTCTGCTGGTCTTAAAGCTCATGCAGTTGGTCCTGTTGAGAAGATCAAATTCAAGGAGATCTTGAAGCGCAGAGGTGGGGTTCAGGACTATTTGGAATGCAGGAATCAGATCCTTGCTCTGTGGAATAAAGATGTTAGTCGAATTTTGCCTCTCGCTGACTGTGGGGTAACATATACTGCTTGTGCGGATGAACCACCTCGTGCTTCCCTAATTAGGGATATTTATACATTCCTCGATCTCAGTGGCTATATAAATATTGGAATTGCTCGTGAGAAGGATAAAGCAGAATCTGGTCCCAAGCATGACTATAAAATTCTGAGAGAAAAAAATTTTGAGGAAATTTTTGGGGTTTCAGTTGCTGATTCAGAGGATGGAGTTTCCTTTATCACAGGCCAGGTTAAGAGTTCTAGAACTAAAACTGATGCGAAGAGTGGTGTCATAATTAAAAGCGACAACTCGACTCATGAAGTCACAAAAGACAACGGGCTTGTAACCACAGCGGCGTTGGAATTGTCCAATACAAAAAACCATGCTGAGTGTGAGGCTGATCATCCGGAAAACACCAGTGTTGATGCAAGGTTACAAAGTAAATTGGACAATATGGATGTTTCAAGTAGTGATCCAATTAGTGAGACATTGGGTGATGGAGGCATCCCTCTTGAAACTCCAGAGTTAAAGAATGTATCACACAGTACTCAGTGTGCATCACAAGATCATGCAGTGAGGAATAATAATCCGCAATGCGGTCTGGAAGTGAAAAAGAAAATCATTGTCATAGGTGCTGGTCCTGCTGGATTAACTGCTGCACGCCACTTGCAACGTCAGGGCTTTTCAGTCACTATATTGGAAGCTAGGAGTAGGATAGGGGGCCGTGTTTATACAGACAGGTCATCTCTATCAGTTCCTGTGGATCTTGGTGCTAGCATTATAACTGGTGTTGAGGCTGATTGGGCGACTGAAAGACGACCAGACCCCTCCTCTTTGGTTTGTGCACAGCTGGGCCTTGAGTTGACTGTCTTAAACAGTGATTGCCCTCTTTATGACATTGCAACAGGTGAAAAGGTTCCTGCAGATCTGGATGAAGCATTGGAAGCAGAGTTCAACAGCCTTCTTGATGACATGGTATTGCTTGTTGCACAGGAGGGAGAACAGACAAGAATGTCTCTCGAGAAAGGTTTGGAACATGCCCTCAAGAGGCGTCGTATGGCAAAAACATCAACTAGTGTTGAAGAAAAAGAACTGCATGATTTAATGGATGGTTTCATTGATGCCAAAAAAAATATTGATAGAGCTAAGAAAAGTTGTCAAAAGCTAGAGCTTTTGAGCCCTCTTGAGAGGAGGGTCATGGATTGGCATTTTGCCAATTTGGAATATGGTTGTGCTGCTCCGCTGAAGGAGGTCTCTCTCCCCAACTGGAACCAGGATGATGTTTATGGTGGCTTTGGAGGAGCTCACTGCATGATTAAAGGGGGTTACAGCACTGTTGTCGAGTCTCTTGGAGAAGGACTTCACATTCACTTGAATCATGTAGTCACTGATATTTCATATGTCACCAAAGACGCTGGATTGAACACTAACCGGTGTAACAAAGTCAAGGTTTCCACATCTAATGGCAGCGATTTTTCAGGAGATGCGATTTTGATTACAGTGCCTCTTGGGTGCTTAAAAGCAGAAACCATCAAATTTTCCCCACCATTGCCCCACTGGAAACATTCTTCCATTCTGCGGCTTGGGTTTGGAGTTCTTAATAAAGTAGTTTTGGAATTTCCAGATGTCTTTTGGGATGATTCTGTGGATTACTTTGGAGCAACTGCTGAGGAAACAGAACTGAGGGGCCAGTGCTTTATGTTCTGGAATGTCAAGAAAACCGTCGGGGCTCCTGTTCTCATAGCCTTAGTGGTTGGTAAGGCAGCTATAGATGGGCAAAATATGAGCTCTTCTGAACATGTTAACCATGCGATAGTGGTTCTTCGTAAATTGTTTGGAGAGGCTTCAGTACCTGATCCTGTTGCATCAGTTGTGACAGATTGGGGTAAGGATCCTTTCAGCTACGGTGCCTACTCATATGTTGCTGTTGGAGCTTCGGGGGAAGATTATGATATACTAGGGAGACCTGTTGAGAACTGCCTATTTTTTGCTGGTGAAGCTACCTGCAAGGAGCATCCTGACACTGTTGGTGGTGCGATGATGAGTGGCCTCCGGGAGGCAGTGCGTATAATTGACATACTGACTACTGGAAATGATTATACAGCAGAAGCAGACGCCATTGCAGGTATTCAGAGACAATCAGATTCTGAAAGGGCTGAAGTTAGAGACATAACAAGGAGACTTGATGCAGTTGAACTTTCAGATGTCCTTTACATGAACAAGGAGGCCCTACTCCAGGACATGTTCTTTAATGCAAAGACTACCAAAGGAAGGTTGCATCTGGCCAAAGAGTTATTGAGTCTTCCTGTTGAAACCTTGAAGTCCTTTGCTGGCACCAAAGAAGGGCTGACTACTCTCAACTCGTGGATACTGGACTCGATGGGGAAGGCTGGGACTCAACTCTTGCGGCATTGTGTTCGGCTTCTTGTGCTTGTTTCAACGGACCTACTGGCTGTGCGCTTGTCTGGCATTGGGAAAACTGTACGAGAAAAAGTTTGTGTACATACAAGCCGTGATATACGTGCCATAGCAAGTCAGCTGGTTAATGTGTGGCTTGAAGTTTTCCGCAAGGAAAAAGCTTCCAATGGTGCGTTGAAGTTGTCAAGGCAAGCAACTGCTGCAGATGCATTGAGGAGAAAACCAATTAAAGATCCATCTTCTGGTAAGCCGCCTCTACACACATTTCATGGTGATTTAGAGCACAAAGGAAGCTTACAGGATTCAGCATCGACCGCAAGCCATTTGCCTTTGAATGCAAATGGTAAGAAAGTGAATGGCAAACCCATTAAGGGTGAAACAGCAAATTCCTCAAAATCAGAGATTAATTCATCAAGGTTTCGAGGTTCAACTGGTAGACCACATTCTGAGCTAAAGGAGAATGACGTTGCTGTGACAGAAGCAGAACAAGCTGCCATTGCTGCTGCTGAAGCAGCCCGTGCAGCAGCACTTGCAGCTGCCGAGGCATATGCATCTTCAGAAGCCAAGAGTGGTACTCTGCTTCAGCTTCCCAAGATTCCCTCATTTCATAAGTTTGCTCGACGGGAGCAGTACCCTCAAATGGATGAGTATGATTTTAGGAGGAAGTGGTCAGGTGGTGATTTGGGTAGACAAGATTGTATATCAGAAATAGACTCAAGAAACTGCAAAGTTAGGGACTGGTCTGTTGATTTCTCTGCCACTTGCGTCAATATTGATAGTTCAAGAATGTCAGTCGATAACCTCTCCCAGCGGAGCAATCCAAATGAGACTGGTAGTCAAACAAATATCCGAGAGCACTCAGGAGAGAGTGCTGCTGTCGACAGCAGTATTTATACAAGAGCATGGGTCGATACAGCTGGTAGTGCCGGGATAAAGGATTATCATGCCATTGAGATGTGGCAATCTCAAGCAGCTGCAGTAGACCCTGATTTCTTCCATCCAGAACCGTATATACATGATGAGGAAGGTTCAAATACAACTTCAAGAAAACACAGCTGGAAGCATGAAGGACATGTAAATGAGGGCTCTGTTTCCCAAGTTACCGTGAACAAGGAGTCGTTAAAAAATCATCATCGAGGAGCAGATAATATTAAGCAGGCTGTTGTCGATTATGTGGCATCATTGCTTATGCCCCTTTATAAAGCTAAAAAGATAGATAGAGAGGGATACAAGTCAATCATGAAGAAAAGTGCTACCAAAGTCATGGAGCTCGCCACAGACTCAGAAAAAGCCATGGCTGTTTATGAGTTTCTTGATTTCAAGCGCAGGAACAAGATCCGTGCTTTTGTGGATAAATTGATTGAGAGGCACATGGCAGCAAAACCCACAGTGAAATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006476 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016575 GO:0018022 GO:0018193 GO:0018205 GO:0019538 GO:0022622 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0051276 GO:0051568 GO:0071704 GO:0071840 GO:0098732 GO:0099402 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Amino_oxidase SWIRM

Protein Analysis

1779

Amino Acids

194.7

Weight (kDa)

5.85

Isoelectric Point (pI)

37.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	464 - 542	4.3e-12	SWIRM domain
Thi4	PF01946	710 - 749	5e-06	Thi4 family
Pyr_redox_2	PF07992	711 - 748	6.5e-06	Pyridine nucleotide-disulphide oxidoreductase
DAO	PF01266	712 - 747	1.3e-07	FAD dependent oxidoreductase
NAD_binding_8	PF13450	715 - 771	4.9e-15	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	721 - 1197	1.8e-88	Flavin containing amine oxidoreductase
SCAF11-like_C	PF23030	1695 - 1743	2.6e-06	SCAF11-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0004779)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16310 AT4G16310 AT4G16310 AT4G16310 AT4G16310
fragaria_vesca	FvH4_2g39110 FvH4_2g39110 FvH4_2g39110
malus_domestica	MD08G1017300.v1.1 MD15G1016200.v1.1 MD15G1018300.v1.1
prunus_persica	Prupe.1G370000_v2.0.a1 Prupe.1G370000_v2.0.a1 Prupe.1G370000_v2.0.a1 Prupe.1G370000_v2.0.a1
pyrus_communis	pycom08g01510 pycom15g01410 pycom15g01420
rosa_chinensis	RchiOBHm_Chr6g0302221
rosa_laevigata	RLG00000011185
rosa_multiflora	Rmu_sc0003633.1_g000002
rosa_roxburghii	Rroxscaffold_7G00165980
rosa_rugosa	Rorug06G0313100 Rorug06G0313200 Rorug06G0313300 Rorug06G0313300
rosa_samantha	Rh6AG425800 Rh6BG476500 Rh6CG438600 Rh6DG425700
rosa_wichuraiana	Rw6G036880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	2300, 5136
AasI	GACNNNNNNGTC	1 cut(s)	2530
Acc36I	ACCTGC	2 cut(s)	3530, 3632
AccB1I	GGYRCC	2 cut(s)	3425, 3851
AccB7I	CCANNNNNTGG	2 cut(s)	1201, 4178
AccI	GTMKAC	4 cut(s)	4372, 4624, 4815, 4917
AccIII	TCCGGA	2 cut(s)	529, 1924
AcoI	YGGCCR	1 cut(s)	3801
AcuI	CTGAAG	7 cut(s)	26, 2783, 3348, 3696, 4464, 4476, 4502
AcyI	GRCGYC	2 cut(s)	2569, 3633
AdeI	CACNNNGTG	1 cut(s)	1571
AfaI	GTAC	8 cut(s)	306, 1339, 2065, 3369, 4002, 4020, 4510, 4568
AflII	CTTAAG	1 cut(s)	137
AflIII	ACRYGT	3 cut(s)	3316, 3759, 5008
AgeI	ACCGGT	1 cut(s)	2949
AhdI	GACNNNNNGTC	1 cut(s)	4770
AhlI	ACTAGT	2 cut(s)	1103, 2591
AjnI	CCWGG	4 cut(s)	204, 1764, 2790, 3753
AloI	GAACNNNNNNTCC	2 cut(s)	2453, 2485
Alw21I	GWGCWC	6 cut(s)	2365, 2824, 3308, 4221, 4794, 5208
Alw44I	GTGCAC	1 cut(s)	2361
AlwNI	CAGNNNCTG	8 cut(s)	689, 1346, 1373, 1661, 1730, 2276, 3371, 3665
Ama87I	CYCGRG	1 cut(s)	2537
Aor13HI	TCCGGA	2 cut(s)	529, 1924
ApaLI	GTGCAC	1 cut(s)	2361
AseI	ATTAAT	1 cut(s)	4341
AsiGI	ACCGGT	1 cut(s)	2949
Asp700I	GAANNNNTTC	2 cut(s)	2433, 2877
AspLEI	GCGC	4 cut(s)	1209, 1440, 3978, 5262
AsuC2I	CCSGG	3 cut(s)	556, 3572, 4864
AsuNHI	GCTAGC	1 cut(s)	2291
AvaI	CYCGRG	1 cut(s)	2537
AvaII	GGWCC	7 cut(s)	245, 905, 1055, 1400, 1664, 2156, 3961
BaeGI	GKGCMC	1 cut(s)	2365
BalI	TGGCCA	1 cut(s)	3803
BamHI	GGATCC	2 cut(s)	877, 3409
BanI	GGYRCC	2 cut(s)	3425, 3851
BanII	GRGCYC	6 cut(s)	2699, 2824, 3250, 3308, 5024, 5208
BauI	CACGAG	4 cut(s)	588, 1569, 1638, 3880
BbsI	GAAGAC	2 cut(s)	1146, 3812
Bbv12I	GWGCWC	6 cut(s)	2365, 2824, 3308, 4221, 4794, 5208
BbvCI	CCTCAGC	1 cut(s)	3186
BceAI	ACGGC	2 cut(s)	2226, 4014
BcgI	CGANNNNNNTGC	6 cut(s)	2839, 2873, 3917, 3951, 4466, 4500
BciT130I	CCWGG	4 cut(s)	206, 1766, 2792, 3755
BciVI	GTATCC	2 cut(s)	3879, 5156
BclI	TGATCA	4 cut(s)	691, 1090, 1279, 1918
BcnI	CCSGG	3 cut(s)	556, 3572, 4864
BcuI	ACTAGT	2 cut(s)	1103, 2591
BfaI	CTAG	8 cut(s)	222, 1104, 1779, 2223, 2292, 2592, 2684, 3476
BfmI	CTRYAG	5 cut(s)	1362, 2439, 3285, 4137, 4911
BfrI	CTTAAG	1 cut(s)	137
BfuAI	ACCTGC	2 cut(s)	3530, 3632
BfuI	GTATCC	2 cut(s)	3879, 5156
BglII	AGATCT	2 cut(s)	1428, 2443
BmcAI	AGTACT	1 cut(s)	2065
Bme1390I	CCNGG	7 cut(s)	206, 556, 1766, 2792, 3572, 3755, 4864
Bme18I	GGWCC	7 cut(s)	245, 905, 1055, 1400, 1664, 2156, 3961
BmeRI	GACNNNNNGTC	1 cut(s)	4770
BmeT110I	CYCGRG	1 cut(s)	2537
BmrFI	CCNGG	7 cut(s)	206, 556, 1766, 2792, 3572, 3755, 4864
BmtI	GCTAGC	1 cut(s)	2295
BpiI	GAAGAC	2 cut(s)	1146, 3812
BplI	GAGNNNNNCTC	4 cut(s)	807, 839, 4495, 4527
BpmI	CTGGAG	2 cut(s)	2022, 3737
Bpu10I	CCTNAGC	1 cut(s)	3186
BpuEI	CTTGAG	5 cut(s)	2396, 2546, 2723, 4636, 4887
BpuMI	CCSGG	3 cut(s)	556, 3572, 4864
BsaAI	YACGTR	1 cut(s)	4040
BsaBI	GATNNNNATC	1 cut(s)	525
BsaHI	GRCGYC	2 cut(s)	2569, 3633
BsaI	GGTCTC	4 cut(s)	460, 489, 2776, 3475
BsaJI	CCNNGG	2 cut(s)	4476, 5229
BsaWI	WCCGGW	3 cut(s)	529, 1924, 2949
BsaXI	ACNNNNNCTCC	4 cut(s)	17, 47, 626, 656
Bse118I	RCCGGY	1 cut(s)	2949
Bse3DI	GCAATG	6 cut(s)	2117, 2415, 3065, 3636, 4431, 5117
Bse8I	GATNNNNATC	1 cut(s)	525
BseAI	TCCGGA	2 cut(s)	529, 1924
BseBI	CCWGG	4 cut(s)	206, 1766, 2792, 3755
BseDI	CCNNGG	2 cut(s)	4476, 5229
BseJI	GATNNNNATC	1 cut(s)	525
BseMI	GCAATG	6 cut(s)	2117, 2415, 3065, 3636, 4431, 5117
BseRI	GAGGAG	6 cut(s)	38, 2338, 2722, 2832, 4165, 5088
BseSI	GKGCMC	1 cut(s)	2365
BseYI	CCCAGC	3 cut(s)	2368, 3908, 4743
BsgI	GTGCAG	2 cut(s)	2160, 4476
Bsh1285I	CGRYCG	2 cut(s)	53, 4251
BshNI	GGYRCC	2 cut(s)	3425, 3851
BshTI	ACCGGT	1 cut(s)	2949
BsiEI	CGRYCG	2 cut(s)	53, 4251
BsiHKAI	GWGCWC	6 cut(s)	2365, 2824, 3308, 4221, 4794, 5208
BsiHKCI	CYCGRG	1 cut(s)	2537
BsiSI	CCGG	7 cut(s)	36, 530, 556, 1925, 2950, 3571, 4863
BslFI	GGGAC	6 cut(s)	231, 277, 918, 1650, 3925, 4685
BsmFI	GGGAC	6 cut(s)	231, 277, 918, 1650, 3925, 4685
BsmI	GAATGC	2 cut(s)	1472, 4276
Bso31I	GGTCTC	4 cut(s)	460, 489, 2776, 3475
BsoBI	CYCGRG	1 cut(s)	2537
Bsp1286I	GDGCHC	9 cut(s)	2365, 2699, 2824, 3250, 3308, 4221, 4794, 5024, 5208
Bsp13I	TCCGGA	2 cut(s)	529, 1924
Bsp1407I	TGTACA	2 cut(s)	304, 4018
Bsp19I	CCATGG	1 cut(s)	5229
BspEI	TCCGGA	2 cut(s)	529, 1924
BspHI	TCATGA	3 cut(s)	1087, 1834, 5175
BspMAI	CTGCAG	4 cut(s)	1366, 2443, 4141, 4915
BspMI	ACCTGC	2 cut(s)	3530, 3632
BspOI	GCTAGC	1 cut(s)	2295
BspQI	GCTCTTC	1 cut(s)	3313
BspT107I	GGYRCC	2 cut(s)	3425, 3851
BspTI	CTTAAG	1 cut(s)	137
BspTNI	GGTCTC	4 cut(s)	460, 489, 2776, 3475
BsrDI	GCAATG	6 cut(s)	2117, 2415, 3065, 3636, 4431, 5117
BsrFI	RCCGGY	1 cut(s)	2949
BsrGI	TGTACA	2 cut(s)	304, 4018
BssAI	RCCGGY	1 cut(s)	2949
BssECI	CCNNGG	2 cut(s)	4476, 5229
BssNI	GRCGYC	2 cut(s)	2569, 3633
BssSI	CACGAG	4 cut(s)	588, 1569, 1638, 3880
BssT1I	CCWWGG	1 cut(s)	5229
Bst2BI	CACGAG	4 cut(s)	588, 1569, 1638, 3880
Bst2UI	CCWGG	4 cut(s)	206, 1766, 2792, 3755
Bst6I	CTCTTC	8 cut(s)	116, 183, 601, 608, 1104, 1330, 1793, 3313
BstACI	GRCGYC	2 cut(s)	2569, 3633
BstAFI	CTTAAG	1 cut(s)	137
BstAPI	GCANNNNNTGC	4 cut(s)	1373, 4136, 4454, 4466
BstAUI	TGTACA	2 cut(s)	304, 4018
BstBAI	YACGTR	1 cut(s)	4040
BstC8I	GCNNGC	7 cut(s)	2179, 2293, 3850, 4128, 4255, 5094, 5208
BstDSI	CCRYGG	1 cut(s)	5229
BstENI	CCTNNNNNAGG	3 cut(s)	140, 3572, 3752
BstHHI	GCGC	4 cut(s)	1209, 1440, 3978, 5262
BstMCI	CGRYCG	2 cut(s)	53, 4251
BstNI	CCWGG	4 cut(s)	206, 1766, 2792, 3755
BstNSI	RCATGY	5 cut(s)	338, 2558, 3320, 3763, 5012
BstSCI	CCNGG	7 cut(s)	204, 554, 1764, 2790, 3570, 3753, 4862
BstSFI	CTRYAG	5 cut(s)	1362, 2439, 3285, 4137, 4911
BstSLI	GKGCMC	1 cut(s)	2365
BstV2I	GAAGAC	2 cut(s)	1146, 3812
BstXI	CCANNNNNNTGG	2 cut(s)	658, 5200
BsuI	GTATCC	2 cut(s)	3879, 5156
BtgI	CCRYGG	1 cut(s)	5229
BtgZI	GCGATG	1 cut(s)	3569
BtsI	GCAGTG	4 cut(s)	1374, 2097, 2824, 3585
BveI	ACCTGC	2 cut(s)	3530, 3632
Cac8I	GCNNGC	7 cut(s)	2179, 2293, 3850, 4128, 4255, 5094, 5208
CaiI	CAGNNNCTG	8 cut(s)	689, 1346, 1373, 1661, 1730, 2276, 3371, 3665
CciI	TCATGA	3 cut(s)	1087, 1834, 5175
CfoI	GCGC	4 cut(s)	1209, 1440, 3978, 5262
Cfr10I	RCCGGY	1 cut(s)	2949
CseI	GACGC	5 cut(s)	357, 2558, 2939, 3641, 4690
Csp6I	GTAC	8 cut(s)	305, 1338, 2064, 3368, 4001, 4019, 4509, 4567
CspAI	ACCGGT	1 cut(s)	2949
CviQI	GTAC	8 cut(s)	305, 1338, 2064, 3368, 4001, 4019, 4509, 4567
DraIII	CACNNNGTG	1 cut(s)	1571
DrdI	GACNNNNNNGTC	1 cut(s)	2530
DriI	GACNNNNNGTC	1 cut(s)	4770
DseDI	GACNNNNNNGTC	1 cut(s)	2530
EaeI	YGGCCR	1 cut(s)	3801
Eam1104I	CTCTTC	8 cut(s)	116, 183, 601, 608, 1104, 1330, 1793, 3313
Eam1105I	GACNNNNNGTC	1 cut(s)	4770
EarI	CTCTTC	8 cut(s)	116, 183, 601, 608, 1104, 1330, 1793, 3313
Ecl136II	GAGCTC	3 cut(s)	2822, 3306, 5206
Eco130I	CCWWGG	1 cut(s)	5229
Eco24I	GRGCYC	6 cut(s)	2699, 2824, 3250, 3308, 5024, 5208
Eco31I	GGTCTC	4 cut(s)	460, 489, 2776, 3475
Eco47I	GGWCC	7 cut(s)	245, 905, 1055, 1400, 1664, 2156, 3961
Eco53kI	GAGCTC	3 cut(s)	2822, 3306, 5206
Eco57I	CTGAAG	7 cut(s)	26, 2783, 3348, 3696, 4464, 4476, 4502
Eco88I	CYCGRG	1 cut(s)	2537
EcoICRI	GAGCTC	3 cut(s)	2822, 3306, 5206
EcoNI	CCTNNNNNAGG	3 cut(s)	140, 3572, 3752
EcoO109I	RGGNCCY	4 cut(s)	202, 245, 789, 3745
EcoRI	GAATTC	1 cut(s)	583
EcoRII	CCWGG	4 cut(s)	204, 1764, 2790, 3753
EcoT14I	CCWWGG	1 cut(s)	5229
EcoT22I	ATGCAT	2 cut(s)	4147, 4489
EcoT38I	GRGCYC	6 cut(s)	2699, 2824, 3250, 3308, 5024, 5208
ErhI	CCWWGG	1 cut(s)	5229
FalI	AAGNNNNNCTT	2 cut(s)	1415, 1447
FaqI	GGGAC	6 cut(s)	231, 277, 918, 1650, 3925, 4685
FauI	CCCGC	1 cut(s)	1056
FauNDI	CATATG	3 cut(s)	2917, 3436, 4483
FbaI	TGATCA	4 cut(s)	691, 1090, 1279, 1918
FblI	GTMKAC	4 cut(s)	4372, 4624, 4815, 4917
FriOI	GRGCYC	6 cut(s)	2699, 2824, 3250, 3308, 5024, 5208
FspBI	CTAG	8 cut(s)	222, 1104, 1779, 2223, 2292, 2592, 2684, 3476
GlaI	GCGC	4 cut(s)	1208, 1439, 3977, 5261
GsaI	CCCAGC	3 cut(s)	2372, 3912, 4747
GsuI	CTGGAG	2 cut(s)	2022, 3737
HapII	CCGG	7 cut(s)	36, 530, 556, 1925, 2950, 3571, 4863
HgaI	GACGC	5 cut(s)	357, 2558, 2939, 3641, 4690
HhaI	GCGC	4 cut(s)	1209, 1440, 3978, 5262
Hin1I	GRCGYC	2 cut(s)	2569, 3633
Hin6I	GCGC	4 cut(s)	1207, 1438, 3976, 5260
HinP1I	GCGC	4 cut(s)	1207, 1438, 3976, 5260
HincII	GTYRAC	5 cut(s)	7, 178, 2382, 3322, 4816
HindII	GTYRAC	5 cut(s)	7, 178, 2382, 3322, 4816
HindIII	AAGCTT	3 cut(s)	446, 4095, 4228
HpaI	GTTAAC	1 cut(s)	3322
HpaII	CCGG	7 cut(s)	36, 530, 556, 1925, 2950, 3571, 4863
Hpy99I	CGWCG	3 cut(s)	2574, 3245, 4560
HpyCH4IV	ACGT	3 cut(s)	2191, 4039, 4401
HpySE526I	ACGT	3 cut(s)	2191, 4039, 4401
Hsp92I	GRCGYC	2 cut(s)	2569, 3633
HspAI	GCGC	4 cut(s)	1207, 1438, 3976, 5260
KflI	GGGWCCC	1 cut(s)	245
Kpn2I	TCCGGA	2 cut(s)	529, 1924
Ksp22I	TGATCA	4 cut(s)	691, 1090, 1279, 1918
KspAI	GTTAAC	1 cut(s)	3322
LguI	GCTCTTC	1 cut(s)	3313
MaeI	CTAG	8 cut(s)	222, 1104, 1779, 2223, 2292, 2592, 2684, 3476
MaeII	ACGT	3 cut(s)	2191, 4039, 4401
MfeI	CAATTG	2 cut(s)	99, 674
MhlI	GDGCHC	9 cut(s)	2365, 2699, 2824, 3250, 3308, 4221, 4794, 5024, 5208
MlsI	TGGCCA	1 cut(s)	3803
MluNI	TGGCCA	1 cut(s)	3803
MlyI	GAGTC	9 cut(s)	1352, 1825, 2870, 3826, 3887, 3907, 4643, 5060, 5210
MmeI	TCCRAC	2 cut(s)	1857, 3427
Mox20I	TGGCCA	1 cut(s)	3803
Mph1103I	ATGCAT	2 cut(s)	4147, 4489
MroI	TCCGGA	2 cut(s)	529, 1924
MroXI	GAANNNNTTC	2 cut(s)	2433, 2877
MscI	TGGCCA	1 cut(s)	3803
MslI	CAYNNNNRTG	2 cut(s)	4889, 5013
Msp20I	TGGCCA	1 cut(s)	3803
MspCI	CTTAAG	1 cut(s)	137
MspI	CCGG	7 cut(s)	36, 530, 556, 1925, 2950, 3571, 4863
MspR9I	CCNGG	7 cut(s)	206, 556, 1766, 2792, 3572, 3755, 4864
MunI	CAATTG	2 cut(s)	99, 674
Mva1269I	GAATGC	2 cut(s)	1472, 4276
MvaI	CCWGG	4 cut(s)	206, 1766, 2792, 3755
NciI	CCSGG	3 cut(s)	556, 3572, 4864
NcoI	CCATGG	1 cut(s)	5229
NdeI	CATATG	3 cut(s)	2917, 3436, 4483
NheI	GCTAGC	1 cut(s)	2291
NmeAIII	GCCGAG	1 cut(s)	4501
NsiI	ATGCAT	2 cut(s)	4147, 4489
NspI	RCATGY	5 cut(s)	338, 2558, 3320, 3763, 5012
PaeR7I	CTCGAG	1 cut(s)	2537
PagI	TCATGA	3 cut(s)	1087, 1834, 5175
PciI	ACATGT	3 cut(s)	3316, 3759, 5008
PciSI	GCTCTTC	1 cut(s)	3313
PctI	GAATGC	2 cut(s)	1472, 4276
PdmI	GAANNNNTTC	2 cut(s)	2433, 2877
PflMI	CCANNNNNTGG	2 cut(s)	1201, 4178
PfoI	TCCNGGA	3 cut(s)	554, 3570, 3753
PinAI	ACCGGT	1 cut(s)	2949
Ple19I	CGATCG	1 cut(s)	53
PleI	GAGTC	9 cut(s)	1351, 1825, 2869, 3825, 3887, 3907, 4643, 5059, 5210
PpsI	GAGTC	9 cut(s)	1351, 1825, 2869, 3825, 3887, 3907, 4643, 5059, 5210
Ppu21I	YACGTR	1 cut(s)	4040
PpuMI	RGGWCCY	1 cut(s)	245
PscI	ACATGT	3 cut(s)	3316, 3759, 5008
PshBI	ATTAAT	1 cut(s)	4341
PsiI	TTATAA	2 cut(s)	2300, 5136
Psp124BI	GAGCTC	3 cut(s)	2824, 3308, 5208
Psp5II	RGGWCCY	1 cut(s)	245
Psp6I	CCWGG	4 cut(s)	204, 1764, 2790, 3753
PspFI	CCCAGC	3 cut(s)	2368, 3908, 4743
PspGI	CCWGG	4 cut(s)	204, 1764, 2790, 3753
PspPPI	RGGWCCY	1 cut(s)	245
PsrI	GAACNNNNNNTAC	2 cut(s)	4932, 4964
PstI	CTGCAG	4 cut(s)	1366, 2443, 4141, 4915
PstNI	CAGNNNCTG	8 cut(s)	689, 1346, 1373, 1661, 1730, 2276, 3371, 3665
PvuI	CGATCG	1 cut(s)	53
PvuII	CAGCTG	7 cut(s)	1190, 2368, 4057, 4472, 4853, 4910, 4992
RsaI	GTAC	8 cut(s)	306, 1339, 2065, 3369, 4002, 4020, 4510, 4568
RsaNI	GTAC	8 cut(s)	305, 1338, 2064, 3368, 4001, 4019, 4509, 4567
RseI	CAYNNNNRTG	2 cut(s)	4889, 5013
SacI	GAGCTC	3 cut(s)	2824, 3308, 5208
SalI	GTCGAC	1 cut(s)	4814
SapI	GCTCTTC	1 cut(s)	3313
ScaI	AGTACT	1 cut(s)	2065
SchI	GAGTC	9 cut(s)	1352, 1825, 2870, 3826, 3887, 3907, 4643, 5060, 5210
ScrFI	CCNGG	7 cut(s)	206, 556, 1766, 2792, 3572, 3755, 4864
SduI	GDGCHC	9 cut(s)	2365, 2699, 2824, 3250, 3308, 4221, 4794, 5024, 5208
SfcI	CTRYAG	5 cut(s)	1362, 2439, 3285, 4137, 4911
Sfr274I	CTCGAG	1 cut(s)	2537
SinI	GGWCC	7 cut(s)	245, 905, 1055, 1400, 1664, 2156, 3961
SlaI	CTCGAG	1 cut(s)	2537
SmiMI	CAYNNNNRTG	2 cut(s)	4889, 5013
SmlI	CTYRAG	7 cut(s)	137, 2375, 2537, 2561, 2702, 4651, 4902
SmoI	CTYRAG	7 cut(s)	137, 2375, 2537, 2561, 2702, 4651, 4902
SpeI	ACTAGT	2 cut(s)	1103, 2591
SspI	AATATT	4 cut(s)	1627, 2653, 4708, 5086
SspMI	CTAG	8 cut(s)	222, 1104, 1779, 2223, 2292, 2592, 2684, 3476
SstI	GAGCTC	3 cut(s)	2824, 3308, 5208
StyD4I	CCNGG	7 cut(s)	204, 554, 1764, 2790, 3570, 3753, 4862
StyI	CCWWGG	1 cut(s)	5229
TaiI	ACGT	3 cut(s)	2194, 4042, 4404
TatI	WGTACW	3 cut(s)	304, 2063, 4018
TauI	GCSGC	4 cut(s)	1874, 3100, 3928, 4189
TspGWI	ACGGA	2 cut(s)	3974, 5264
Van91I	CCANNNNNTGG	2 cut(s)	1201, 4178
Vha464I	CTTAAG	1 cut(s)	137
VneI	GTGCAC	1 cut(s)	2361
VpaK11BI	GGWCC	7 cut(s)	245, 905, 1055, 1400, 1664, 2156, 3961
VspI	ATTAAT	1 cut(s)	4341
XagI	CCTNNNNNAGG	3 cut(s)	140, 3572, 3752
XbaI	TCTAGA	1 cut(s)	1778
XceI	RCATGY	5 cut(s)	338, 2558, 3320, 3763, 5012
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1873, 3072, 3147
XhoI	CTCGAG	1 cut(s)	2537
XmiI	GTMKAC	4 cut(s)	4372, 4624, 4815, 4917
XmnI	GAANNNNTTC	2 cut(s)	2433, 2877
XspI	CTAG	8 cut(s)	222, 1104, 1779, 2223, 2292, 2592, 2684, 3476
ZrmI	AGTACT	1 cut(s)	2065
Zsp2I	ATGCAT	2 cut(s)	4147, 4489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.