Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0004779

Physical Location & Seq

Genomic Coordinates Forward (+)

7445835 .. 7453084

Gene Structure 7250 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011185

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5724 bp

ATGGATGGAGACGAGAAGAGGTCGAGTTTTAAGAAGAGATCGAAGTTAATGGAGGTTGATCACAATTCGGATGACGATGAGCCGATTGGGTCACTGCTGAAGAAGAGGCAGCGAAACCCTAAGAAGGTTAAGCCGGGGTTGGAGGGCGAAAGGGGCAAGAAGGTTGAGGCTGGAGAGGAGGACTTGGGGGGACTGGATGATACCTTGGCAAGTTTTAGGAAGAAGCTCAAGGGTCCTAAGAGGGATTCTGGGGCCGGAACCGGGAGGGGAAGGAGTTCTAGTTTGGATGTTGTGCAGTCTTCGGATCAGGATGGGGGGTCGGATGTAAAATCAGTGTCGAGGAGTATGGAGAAAGGTCCGGTCATCGATGATGATGGAACCGATGTGATTATGGATGTAGAGGTGGAAAACAGGCTTAAGGGAAAGGGAAAGAGACCCAAGGTTTCAGGTCTGGTATCTGGGGAGGGTTCTAATAGCTCTTTGGATCATCATTCGCAAGATTCATTATTGGCATTTTTTCAGAAGGCACAGTCTGGTGTTACTAAGAAGTCTCATCCCTCTTCAAGTCTTAGAGAGAAGAGTGGTTCTCTGGATTTGGAGGATGGACTGAGCCCTAGTTCAGAAGGTGTTGGAGGAAATAGCATGCCTGTGGCTGTACAGAGACATAGTTCTGTTTCAAAACTGAACCAGGAAAATCCAAGATTTGAAGATAGTTTGCTCTTCGATTCTGGTTTTAATTCGTTGGATTCAGTCAACGATCAGTATAAGATAGAGGAACAAAACAGATTTTGCCAAGATTCTGACTGCAACAGACAGAATCAAGAGAGATCTCAAGGACTTTATTCTATTCCAGATGACATGACGAGACTTGAGGATGGAAAGAATGAACCCACAGTGGATCATTCTGGTTTAAATGTTCAAGAGGAACTATGTAGCTTGGATAGATCTAATGGCGGAGATAGCCAGCACTTACAGAAAATTCAAACTTTTGAGAACCGACTGAGGCACTGCTCTGTGACAAACTCAAACACTCCAACGATTTGTGAACAGAAGGGGGAAATGCTTGGGGTCGGAACCAGTGACTCCAAAGGGGGCTTTCCTGATGCTTTGTCCATTCAGTCCATGGATGTTCTAGCTAGATGTACAATATCTTCTTCAACTGGAAAAGAAATTCCGATGCCTCATTATAATGATGAGTTACTGGACAAATCTAACTTTGCCCCGGATACACTAAAGAGGGAAGAAACTCCTTGTAATCGTGTAATTGCTTACACTGAGGGGCAAGAACTTGCTTCCAGTCCTTTGCATGAAGAGAATGCCATGATAACTGATTGTCAGATATCTTCTATCCAGGTGAGTCATCAAGCAAAAGCCTTGCAAACTGCCTCAGTTCAGAAGGGGAGCTATTGTGAAGATTTATCTTCTGATGAAGTATCAAAAGAGAGAATTCTTCCAAAACATGATTACAGTACTAGTAATGAGGAGGTTGATGGAGCTTCTCCTCCGTTATATGCAACAGTAGATGAGAATGAGAGTTTCCCAGAAGACACAGCATCTCTACCTGATATTGAAAACAGAGACGGTAAGCTATCCGCTCTCCAGCGCATACCACGGAATGCTAGGAAACGCAGGCATGGAGACATGGCTTATGAGGGGGATGTTGATTGGGAGATCTCAGTAATTGATCAAGGATTGGATAGTGACAATTCAATTAGAGCGAGAGTGAAGTTTGATTCCTCTTCAAGTATTGGCACAGAAGCTGAAAGTGGTGGGGCTGCAGCAGTGTCTGCTGGTCTAAAAGCTCACGCAGTTGGTCCTGTTGAGAAGATTAGATTCAAGGAGATCTTGAAGCGCAGAGGCGGGCTTCAGGATTACTTGGAATGCAGGAATCAGATCTTAGCTCTGTGGAGCAAAGATGTTAGTCGAATTTTGCCTCTCACTGACTGTGGGGTCACAGAGCCTGCTTGTGTGAATGAACCTGGGCGTGCCTCCCTAATTAGGGATATTTATGCATTTCTAGATCTCAGTGGTTATATAAATGTTGGAATTGCTGCCGAGAAGGATAAAGCAGAACCTGGTTCTAAGCATGACTATAAAATAGTCAGAGAAAAACCTTTTGAGGAAATTTCTGGGGTTTCAATTGCTGACTCAGAGGATGGGGTTTCCTTCATCATTGGCCAGGTTAAGAATTCAAAAACTTCCACCGATGCTAAGAATGGAATTACATTTAATAGCGAAAACTTGACTGAGGGAGCCACAAAAGACAATGGGCATGTTGAGGCAGTGGCATTGGAATTATTTGATGCGAAACATCCTGAAGAATGCCAAACTGATTACCTGGAAAACTGTAGTGCTGATGCAAGGTTCCAAAGTCGATTGGACAATATGGATGTTTCTAGTAGTGATCCCTCTGGTGAGACATTGGATGGTGGAGTCATCCCTGTTGTAACTCCAGAGATAAAGAATGAATCACAGAGTATTCAGTCAACACCACATGATCATGTACCGAGAAATGATACCCTGCAATGTGGTCCAGAAGTCAGAAAGGAGATCATTGTCATAGGTGCTGGTCCTGCTGGCTTAACTGCTGCACGCCACTTGCAGCGTCAGGGGTTTTCAGTCAATGTACTTGAAGCTAGGAGTCGAATAGGAGGTCGCGTTTATACAGACCGGTCATCTCTATCAGTTGCAGTGGATCTTGGTGCTAGCATTATTACTGGTGTCGAGGCTGATTGGGCAACTGAAAGAAGACCCGATCCCTCCTCATTGGTTTGTGCTCAGTTGGGCCTTGAGTTGACTGTATTAAACAGTGATTGCCCTCTTTATGATATTGAAACAGGTCAAAAAGTTCCTGCAGATCTGGATGAGGCATTGGAAGCAGAGTTCAACAGCCTTCTTGATGACATGGTATTGCTTGTAGCACAGAAGGGAGAACGTGCAGCAAGAATGTCTCTTGAGGAAGGTTTTGAATATGTACTTAAGAGGCGACGTATGGCACAATCAGGGAGTGCTAAAGAAAAAGAATTGCATGGTTCAAGGGATGGTTTGATTAATGCTAGAACAAATATTGATGGTAGAGTTGCTGATAAAAGTTATTGGAAGCAAGAGCTCTTGAGTCCTCTTGAGAGGAGGGTTATGGATTGGCATTTTGCTAATTTGGAGTATGGTTGTGCAGCTCCGCTTAAGGAGGTATCTCTACCCCATTGGAACCAAGATGATGTATATGGTGGCTTTGGGGGAGCTCATTGTATGATTAAAGGGGGTTACAGCACTGTTGTTGAGTCTCTTGGAGAAGGACTGCGCATTCACTTGAATCATGTAGTCACTGATATTTCGTATGGTGCTGAGGATGGTGAATTGAATAATAACCAGTGTAAGAAAGTCAAAGTTTCCACATCAAATGGGAGTATCTTTTGTGGAGATGCAGTCTTGATTACAGTGCCTCTTGGGTGCTTAAAAGCAGAAACCATAAAGTTTTCTCCACCATTGCCCCCGTGGAAACATTCTTCTATCACGCGGCTTGGATTTGGCGTTCTTAATAAAGTAGTTTTGGAATTTCCAGATGTCTTTTGGGATGACACCGTGGACTACTTTGGAGCAACTGCTGAAGAAACAGACCTGCGGGGTCAGTGCTTTATGTTCTGGAATATCAAGAAAACTGTTGGGGCTCCCGTTCTTATAGCTTTAGTGGTTGGTAAGGCAGCTATAGAAGGCCAAAATATGAGCTCTTCTGATCATGTTAACCATGCATTAGTGGCTCTCCGTAAATTGTTTGGAGAGGCGTCAGTACCTGATCCAGTTGCATCAGTTGTGACAGATTGGGGCAGGGACCCTTTCAGCTATGGTGCATACTCATACGTTGCTGTCGGAGCTTCTGGAAAGGACTATGACATACTAGGGAGACCTGTTGATAACTGCCTATTTTTCGCTGGTGAAGCTACCTGCAAGGAGCATCCCGACACTGTTGGTGGTGCAATGATGAGTGGGCTTCGAGAGTCGGTGCGTATAATTGACATACTGACAACTGGAAATGATTACACAGCAGAAGCAGAAGCAATGGAGTCCATACAGAGACAGTCAGTCTCTGAAAAGGATGAAGTTTGGGACATAACAAGGAGACTTGATGCAGTAGAACTTTCCGATGTCCTTTACAAGAACAGGGAAGTCTTACTCCAGGACTTGTTCTTTAGTGCAAAAACCACCAAAGGAAGGTTGCATCTGGCCAAAGAGTTATTGAGTCTTCCTGCTGAAACGTTGAAGTCCTTTGCTGGCACCAAAGACGGGCTAACCACACTTAACTCGTGGATACTGGACTCAATGGGGAAAGCGGGGACTCAACTCTTGCGGCATTGTGTTCGTCTTCTTGTTCTTGTGTCAACAGACCTACTGGCTGTGCGCTTGTCTGGCATTGGGAAAACCGTAAGAGAGAAAGTTTGTGTACATACTAGCCGTGATATACGTGCCATTGCAAGTCAGCTAGTTAGTGTGTGGCTTGAAGTCTTCCGCAGAGAAAAAGCTTCTAATGGAGGATTGAAATTGTCAAGGCAAGCCAATGGTGTAGATTCATTGAAGAGAAAAACAGTCAGAGACCCATCTTCTGGAAAGCCGCCACTACACATGTATCATGGTGCTTTTGAGCACAAAGGAAGTTTACAGGATTCTGCATCCACAGGAAGCCAATTGCCTCCGAATCCAAGTGTGAAGAAATTGAATGGCAAAGCCATTAAACTTGAAACAGCAAATTCCTCAAGATTTGGAGGTTCAACAGGCAGACCACATAATGATGACTTTGCTATGACTGAAGAAGAAAGAGCTGCCATTGCTGCTGCTGAAGCAGCGCGAGCTGCTGCACTTGCAGCTGCTAAGGCATATGCATCTTCAGAAGCCAAGAGCAGTTCGTTGCTTCAGCTTCCTAAGATTCCCTCGTTTCATAAATTTGCTCGACGGGAGCAGTACGCTCAAATGGATGAGTATGATTTTAGGAGGAAGTGGTCTGGTGGTGTTTTGGGTAGAGAAGATTGCATATCTGAAATTGACTCTAGGAACTGCAAAGTAAGGAACTGGTCTGTTGATTTCTCCGCTGCTTGTGTCAATCTTGACAGTTCAAGAAGGTCAGTTGATAATCTCTCAGAGCGGAGCCATCCCAATGAGATCGCTAGTCAGTTGAATTTCCGAGAGCACTCAGGGGAGAGTGCTGCTGTTGACAGTAGTATCTATACAAAAGCATGGGTTGATACAGCTGGTAGTGTTGGGGTAAAAGACTATCATGCCATTGAGATGTGGCAATCTCAAGCAGCGGCAGCTGACCCTGATTTCTTCCATCCTGATCCGTATGTAAAGGATGAGGAAGATTCAAATACAACTTCTAAAGGACTAAGCTGGAAGCATGAAGGACTAGTAAATGAGAGCTCTGTTTCGCAAGTTACTGTAAACAAGGGGTCATCGAAAAATCATCGTCAAGGAGCAGACCAAATTAAACATGCAGTTGTTGATTATGTGGCATCATTGCTTATGCCCCTCTATAAAGCTAAAAAGATTGATAGAGAGGGATACAAGTCAATCATGAAGAAAAGTGCTACCAAGGTCATGGAGCTAGCCACTGATGCAGAGAAAGCGATGGCTGTAGCCGAGTTTCTTGATTTCAAGCGCAAGAACAAGATTCGTGCCTTTGTGGATAAATTGATTGAGAAGCACATGGCAGTGAAGCCTGTTGTGAAATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006476 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016575 GO:0018022 GO:0018193 GO:0018205 GO:0019538 GO:0022622 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0051276 GO:0051568 GO:0071704 GO:0071840 GO:0098732 GO:0099402 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Amino_oxidase SWIRM

Protein Analysis

1908

Amino Acids

208.54

Weight (kDa)

5.54

Isoelectric Point (pI)

41.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	602 - 680	2.6e-12	SWIRM domain
Thi4	PF01946	849 - 887	7.4e-06	Thi4 family
DAO	PF01266	851 - 885	2.2e-06	FAD dependent oxidoreductase
NAD_binding_8	PF13450	853 - 909	3.9e-14	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	859 - 1337	4.6e-86	Flavin containing amine oxidoreductase
SCAF11-like_C	PF23030	1824 - 1878	6.4e-06	SCAF11-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004779)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16310 AT4G16310 AT4G16310 AT4G16310 AT4G16310
fragaria_vesca	FvH4_2g39110 FvH4_2g39110 FvH4_2g39110
malus_domestica	MD08G1017300.v1.1 MD15G1016200.v1.1 MD15G1018300.v1.1
prunus_persica	Prupe.1G370000_v2.0.a1 Prupe.1G370000_v2.0.a1 Prupe.1G370000_v2.0.a1 Prupe.1G370000_v2.0.a1
pyrus_communis	pycom08g01510 pycom15g01410 pycom15g01420
rosa_chinensis	RchiOBHm_Chr6g0302221
rosa_laevigata	RLG00000011185
rosa_multiflora	Rmu_sc0003633.1_g000002
rosa_roxburghii	Rroxscaffold_7G00165980
rosa_rugosa	Rorug06G0313100 Rorug06G0313200 Rorug06G0313300 Rorug06G0313300
rosa_samantha	Rh6AG425800 Rh6BG476500 Rh6CG438600 Rh6DG425700
rosa_wichuraiana	Rw6G036880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1188
AasI	GACNNNNNNGTC	1 cut(s)	1949
Acc16I	TGCGCA	1 cut(s)	3302
Acc36I	ACCTGC	2 cut(s)	3627, 3950
AccB1I	GGYRCC	1 cut(s)	4271
AccB7I	CCANNNNNTGG	1 cut(s)	4598
AccBSI	CCGCTC	2 cut(s)	1595, 5134
AccII	CGCG	3 cut(s)	2658, 3517, 4840
AclI	AACGTT	1 cut(s)	4253
AclWI	GGATC	8 cut(s)	312, 492, 906, 2399, 2703, 2750, 3788, 5321
AcoI	YGGCCR	2 cut(s)	2176, 4221
AcuI	CTGAAG	8 cut(s)	119, 1850, 2337, 3627, 4821, 4851, 4863, 4889
AcyI	GRCGYC	1 cut(s)	3782
AfaI	GTAC	9 cut(s)	657, 1144, 1471, 2505, 2628, 2976, 3789, 4440, 4955
AfiI	CCNNNNNNNGG	7 cut(s)	124, 261, 1998, 1999, 4209, 4281, 4598
AflII	CTTAAG	3 cut(s)	416, 2978, 3182
AflIII	ACRYGT	1 cut(s)	4617
AgeI	ACCGGT	1 cut(s)	2670
AhdI	GACNNNNNGTC	1 cut(s)	4079
AhlI	ACTAGT	2 cut(s)	1472, 5395
AjnI	CCWGG	7 cut(s)	687, 1350, 1978, 2074, 2178, 2337, 4173
AloI	GAACNNNNNNTCC	4 cut(s)	2867, 2899, 3516, 3548
Alw21I	GWGCWC	7 cut(s)	2779, 3111, 3244, 3728, 4641, 5181, 5411
AlwI	GGATC	8 cut(s)	312, 492, 906, 2399, 2703, 2750, 3788, 5321
AlwNI	CAGNNNCTG	6 cut(s)	1760, 1787, 1961, 2075, 3791, 4085
AoxI	GGCC	5 cut(s)	252, 2176, 2785, 3712, 4221
ArsI	GACNNNNNNTTYG	2 cut(s)	2638, 2670
AseI	ATTAAT	1 cut(s)	3051
AsiGI	ACCGGT	1 cut(s)	2670
Asp700I	GAANNNNTTC	1 cut(s)	274
AspLEI	GCGC	6 cut(s)	1605, 1854, 3303, 4398, 4840, 5649
AspS9I	GGNCC	8 cut(s)	233, 252, 356, 1814, 2531, 2570, 2785, 3829
AsuC2I	CCSGG	3 cut(s)	135, 262, 1223
AsuHPI	GGTGA	4 cut(s)	1366, 2426, 3365, 3944
AsuNHI	GCTAGC	2 cut(s)	2705, 5593
AvaII	GGWCC	6 cut(s)	233, 356, 1814, 2531, 2570, 3829
BaeI	ACNNNNGTAYC	4 cut(s)	4604, 4637, 5194, 5227
BalI	TGGCCA	2 cut(s)	2178, 4223
BanI	GGYRCC	1 cut(s)	4271
BanII	GRGCYC	6 cut(s)	614, 3111, 3244, 3670, 3728, 5411
BarI	GAAGNNNNNNTAC	2 cut(s)	1135, 1167
BauI	CACGAG	1 cut(s)	4300
BbsI	GAAGAC	6 cut(s)	291, 1551, 2755, 4232, 4352, 4492
Bbv12I	GWGCWC	7 cut(s)	2779, 3111, 3244, 3728, 4641, 5181, 5411
BbvCI	CCTCAGC	1 cut(s)	3345
BceAI	ACGGC	1 cut(s)	4434
BcgI	CGANNNNNNTGC	2 cut(s)	4337, 4371
BciT130I	CCWGG	7 cut(s)	689, 1352, 1980, 2076, 2180, 2339, 4175
BciVI	GTATCC	3 cut(s)	1219, 4299, 5543
BclI	TGATCA	4 cut(s)	58, 1684, 2497, 3733
BcnI	CCSGG	3 cut(s)	135, 262, 1223
BcuI	ACTAGT	2 cut(s)	1472, 5395
BfmI	CTRYAG	5 cut(s)	1776, 2347, 2853, 3705, 5622
BfrI	CTTAAG	3 cut(s)	416, 2978, 3182
BfuAI	ACCTGC	2 cut(s)	3627, 3950
BfuI	GTATCC	3 cut(s)	1219, 4299, 5543
BglII	AGATCT	7 cut(s)	827, 944, 1671, 1842, 1893, 2020, 2857
BmcAI	AGTACT	1 cut(s)	1471
Bme18I	GGWCC	6 cut(s)	233, 356, 1814, 2531, 2570, 3829
BmeRI	GACNNNNNGTC	1 cut(s)	4079
BmgT120I	GGNCC	8 cut(s)	233, 252, 356, 1814, 2531, 2570, 2785, 3829
BmtI	GCTAGC	2 cut(s)	2709, 5597
BpiI	GAAGAC	6 cut(s)	291, 1551, 2755, 4232, 4352, 4492
BplI	GAGNNNNNCTC	2 cut(s)	571, 603
BpmI	CTGGAG	4 cut(s)	192, 1583, 2436, 4157
Bpu10I	CCTNAGC	2 cut(s)	3345, 4863
BpuEI	CTTGAG	9 cut(s)	212, 816, 890, 2810, 2975, 3133, 3143, 4732, 5274
BpuMI	CCSGG	3 cut(s)	135, 262, 1223
Bsa29I	ATCGAT	1 cut(s)	366
BsaAI	YACGTR	1 cut(s)	4460
BsaHI	GRCGYC	1 cut(s)	3782
BsaI	GGTCTC	3 cut(s)	427, 3895, 4581
BsaWI	WCCGGW	2 cut(s)	358, 2670
BsaXI	ACNNNNNCTCC	8 cut(s)	265, 295, 1393, 1423, 2643, 2673, 3411, 3441
Bsc4I	CCNNNNNNNGG	7 cut(s)	124, 261, 1998, 1999, 4209, 4281, 4598
Bse118I	RCCGGY	1 cut(s)	2670
Bse3DI	GCAATG	7 cut(s)	2531, 3485, 3981, 4062, 4464, 4818, 5504
BseBI	CCWGG	7 cut(s)	689, 1352, 1980, 2076, 2180, 2339, 4175
BseCI	ATCGAT	1 cut(s)	366
BseLI	CCNNNNNNNGG	7 cut(s)	124, 261, 1998, 1999, 4209, 4281, 4598
BseMI	GCAATG	7 cut(s)	2531, 3485, 3981, 4062, 4464, 4818, 5504
BseRI	GAGGAG	6 cut(s)	191, 355, 1491, 1496, 2752, 3142
BsgI	GTGCAG	5 cut(s)	314, 2574, 2958, 3192, 4833
Bsh1236I	CGCG	3 cut(s)	2658, 3517, 4840
BshFI	GGCC	5 cut(s)	254, 2178, 2787, 3714, 4223
BshNI	GGYRCC	1 cut(s)	4271
BshTI	ACCGGT	1 cut(s)	2670
BshVI	ATCGAT	1 cut(s)	366
BsiHKAI	GWGCWC	7 cut(s)	2779, 3111, 3244, 3728, 4641, 5181, 5411
BsiSI	CCGG	6 cut(s)	134, 255, 261, 359, 1223, 2671
BslFI	GGGAC	4 cut(s)	204, 3842, 4118, 4345
BslI	CCNNNNNNNGG	7 cut(s)	124, 261, 1998, 1999, 4209, 4281, 4598
BsmBI	CGTCTC	2 cut(s)	3, 1572
BsmFI	GGGAC	4 cut(s)	204, 3842, 4118, 4345
BsmI	GAATGC	5 cut(s)	1321, 1621, 1886, 2327, 3303
BsnI	GGCC	5 cut(s)	254, 2178, 2787, 3714, 4223
Bso31I	GGTCTC	3 cut(s)	427, 3895, 4581
Bsp1286I	GDGCHC	9 cut(s)	614, 2779, 3111, 3244, 3670, 3728, 4641, 5181, 5411
Bsp1407I	TGTACA	3 cut(s)	655, 1142, 4438
Bsp19I	CCATGG	1 cut(s)	1122
BspANI	GGCC	5 cut(s)	254, 2178, 2787, 3714, 4223
BspDI	ATCGAT	1 cut(s)	366
BspFNI	CGCG	3 cut(s)	2658, 3517, 4840
BspHI	TCATGA	1 cut(s)	5562
BspMAI	CTGCAG	2 cut(s)	1780, 2857
BspMI	ACCTGC	2 cut(s)	3627, 3950
BspOI	GCTAGC	2 cut(s)	2709, 5597
BspPI	GGATC	8 cut(s)	312, 492, 906, 2399, 2703, 2750, 3788, 5321
BspQI	GCTCTTC	2 cut(s)	725, 3733
BspT107I	GGYRCC	1 cut(s)	4271
BspTI	CTTAAG	3 cut(s)	416, 2978, 3182
BspTNI	GGTCTC	3 cut(s)	427, 3895, 4581
BsrBI	CCGCTC	2 cut(s)	1595, 5134
BsrDI	GCAATG	7 cut(s)	2531, 3485, 3981, 4062, 4464, 4818, 5504
BsrFI	RCCGGY	1 cut(s)	2670
BsrGI	TGTACA	3 cut(s)	655, 1142, 4438
BssAI	RCCGGY	1 cut(s)	2670
BssNI	GRCGYC	1 cut(s)	3782
BssSI	CACGAG	1 cut(s)	4300
BssT1I	CCWWGG	4 cut(s)	204, 438, 1122, 5580
Bst2BI	CACGAG	1 cut(s)	4300
Bst2UI	CCWGG	7 cut(s)	689, 1352, 1980, 2076, 2180, 2339, 4175
BstACI	GRCGYC	1 cut(s)	3782
BstAFI	CTTAAG	3 cut(s)	416, 2978, 3182
BstAPI	GCANNNNNTGC	1 cut(s)	1787
BstAUI	TGTACA	3 cut(s)	655, 1142, 4438
BstBAI	YACGTR	1 cut(s)	4460
BstDSI	CCRYGG	4 cut(s)	1122, 1610, 3494, 3582
BstFNI	CGCG	3 cut(s)	2658, 3517, 4840
BstHHI	GCGC	6 cut(s)	1605, 1854, 3303, 4398, 4840, 5649
BstNI	CCWGG	7 cut(s)	689, 1352, 1980, 2076, 2180, 2339, 4175
BstNSI	RCATGY	4 cut(s)	646, 2276, 4621, 5483
BstSFI	CTRYAG	5 cut(s)	1776, 2347, 2853, 3705, 5622
BstUI	CGCG	3 cut(s)	2658, 3517, 4840
BstV2I	GAAGAC	6 cut(s)	291, 1551, 2755, 4232, 4352, 4492
BstX2I	RGATCY	8 cut(s)	827, 944, 1671, 1842, 1893, 2020, 2695, 2857
BstXI	CCANNNNNNTGG	1 cut(s)	5587
BstYI	RGATCY	8 cut(s)	827, 944, 1671, 1842, 1893, 2020, 2695, 2857
Bsu15I	ATCGAT	1 cut(s)	366
BsuI	GTATCC	3 cut(s)	1219, 4299, 5543
BsuRI	GGCC	5 cut(s)	254, 2178, 2787, 3714, 4223
BsuTUI	ATCGAT	1 cut(s)	366
BtgI	CCRYGG	4 cut(s)	1122, 1610, 3494, 3582
BtgZI	GCGATG	1 cut(s)	5630
BtsI	GCAGTG	6 cut(s)	92, 1006, 1788, 2289, 2697, 5706
BveI	ACCTGC	2 cut(s)	3627, 3950
CaiI	CAGNNNCTG	6 cut(s)	1760, 1787, 1961, 2075, 3791, 4085
CciI	TCATGA	1 cut(s)	5562
CfoI	GCGC	6 cut(s)	1605, 1854, 3303, 4398, 4840, 5649
Cfr10I	RCCGGY	1 cut(s)	2670
Cfr13I	GGNCC	8 cut(s)	233, 252, 356, 1814, 2531, 2570, 2785, 3829
ClaI	ATCGAT	1 cut(s)	366
CseI	GACGC	2 cut(s)	2594, 3771
CsiI	ACCWGGT	1 cut(s)	2074
Csp6I	GTAC	9 cut(s)	656, 1143, 1470, 2504, 2627, 2975, 3788, 4439, 4954
CspAI	ACCGGT	1 cut(s)	2670
CviQI	GTAC	9 cut(s)	656, 1143, 1470, 2504, 2627, 2975, 3788, 4439, 4954
DraI	TTTAAA	1 cut(s)	912
DrdI	GACNNNNNNGTC	1 cut(s)	1949
DriI	GACNNNNNGTC	1 cut(s)	4079
DseDI	GACNNNNNNGTC	1 cut(s)	1949
EaeI	YGGCCR	2 cut(s)	2176, 4221
Eam1105I	GACNNNNNGTC	1 cut(s)	4079
EciI	GGCGGA	1 cut(s)	969
Ecl136II	GAGCTC	4 cut(s)	3109, 3242, 3726, 5409
Eco130I	CCWWGG	4 cut(s)	204, 438, 1122, 5580
Eco24I	GRGCYC	6 cut(s)	614, 3111, 3244, 3670, 3728, 5411
Eco31I	GGTCTC	3 cut(s)	427, 3895, 4581
Eco32I	GATATC	1 cut(s)	1341
Eco47I	GGWCC	6 cut(s)	233, 356, 1814, 2531, 2570, 3829
Eco53kI	GAGCTC	4 cut(s)	3109, 3242, 3726, 5409
Eco57I	CTGAAG	8 cut(s)	119, 1850, 2337, 3627, 4821, 4851, 4863, 4889
EcoICRI	GAGCTC	4 cut(s)	3109, 3242, 3726, 5409
EcoO109I	RGGNCCY	2 cut(s)	233, 3829
EcoRI	GAATTC	2 cut(s)	1446, 2188
EcoRII	CCWGG	7 cut(s)	687, 1350, 1978, 2074, 2178, 2337, 4173
EcoRV	GATATC	1 cut(s)	1341
EcoT14I	CCWWGG	4 cut(s)	204, 438, 1122, 5580
EcoT22I	ATGCAT	3 cut(s)	2014, 3751, 4876
EcoT38I	GRGCYC	6 cut(s)	614, 3111, 3244, 3670, 3728, 5411
ErhI	CCWWGG	4 cut(s)	204, 438, 1122, 5580
Esp3I	CGTCTC	2 cut(s)	3, 1572
FalI	AAGNNNNNCTT	2 cut(s)	1829, 1861
FaqI	GGGAC	4 cut(s)	204, 3842, 4118, 4345
FauI	CCCGC	3 cut(s)	1853, 3615, 4321
FauNDI	CATATG	1 cut(s)	4870
FbaI	TGATCA	4 cut(s)	58, 1684, 2497, 3733
FriOI	GRGCYC	6 cut(s)	614, 3111, 3244, 3670, 3728, 5411
FspI	TGCGCA	1 cut(s)	3302
GlaI	GCGC	6 cut(s)	1604, 1853, 3302, 4397, 4839, 5648
GsuI	CTGGAG	4 cut(s)	192, 1583, 2436, 4157
HaeIII	GGCC	5 cut(s)	254, 2178, 2787, 3714, 4223
HapII	CCGG	6 cut(s)	134, 255, 261, 359, 1223, 2671
HgaI	GACGC	2 cut(s)	2594, 3771
HhaI	GCGC	6 cut(s)	1605, 1854, 3303, 4398, 4840, 5649
Hin1I	GRCGYC	1 cut(s)	3782
Hin6I	GCGC	6 cut(s)	1603, 1852, 3301, 4396, 4838, 5647
HinP1I	GCGC	6 cut(s)	1603, 1852, 3301, 4396, 4838, 5647
HincII	GTYRAC	6 cut(s)	754, 2487, 2796, 3742, 4377, 5203
HindII	GTYRAC	6 cut(s)	754, 2487, 2796, 3742, 4377, 5203
HindIII	AAGCTT	1 cut(s)	4515
HpaI	GTTAAC	1 cut(s)	3742
HpaII	CCGG	6 cut(s)	134, 255, 261, 359, 1223, 2671
HphI	GGTGA	4 cut(s)	1366, 2426, 3365, 3944
Hpy99I	CGWCG	2 cut(s)	2991, 4947
HpyCH4IV	ACGT	5 cut(s)	2935, 2989, 3858, 4253, 4459
HpySE526I	ACGT	5 cut(s)	2935, 2989, 3858, 4253, 4459
Hsp92I	GRCGYC	1 cut(s)	3782
HspAI	GCGC	6 cut(s)	1603, 1852, 3301, 4396, 4838, 5647
KflI	GGGWCCC	1 cut(s)	3829
Ksp22I	TGATCA	4 cut(s)	58, 1684, 2497, 3733
KspAI	GTTAAC	1 cut(s)	3742
LguI	GCTCTTC	2 cut(s)	725, 3733
MabI	ACCWGGT	1 cut(s)	2074
MaeII	ACGT	5 cut(s)	2935, 2989, 3858, 4253, 4459
MbiI	CCGCTC	2 cut(s)	1595, 5134
MfeI	CAATTG	2 cut(s)	2139, 4679
MflI	RGATCY	8 cut(s)	827, 944, 1671, 1842, 1893, 2020, 2695, 2857
MhlI	GDGCHC	9 cut(s)	614, 2779, 3111, 3244, 3670, 3728, 4641, 5181, 5411
MlsI	TGGCCA	2 cut(s)	2178, 4223
MluNI	TGGCCA	2 cut(s)	2178, 4223
MmeI	TCCRAC	8 cut(s)	120, 300, 610, 723, 1051, 1058, 2023, 3847
Mox20I	TGGCCA	2 cut(s)	2178, 4223
Mph1103I	ATGCAT	3 cut(s)	2014, 3751, 4876
MroXI	GAANNNNTTC	1 cut(s)	274
MscI	TGGCCA	2 cut(s)	2178, 4223
MslI	CAYNNNNRTG	7 cut(s)	647, 1188, 2499, 4782, 5145, 5276, 5699
Msp20I	TGGCCA	2 cut(s)	2178, 4223
MspA1I	CMGCKG	5 cut(s)	4859, 5081, 5240, 5297, 5303
MspCI	CTTAAG	3 cut(s)	416, 2978, 3182
MspI	CCGG	6 cut(s)	134, 255, 261, 359, 1223, 2671
MunI	CAATTG	2 cut(s)	2139, 4679
Mva1269I	GAATGC	5 cut(s)	1321, 1621, 1886, 2327, 3303
MvaI	CCWGG	7 cut(s)	689, 1352, 1980, 2076, 2180, 2339, 4175
MvnI	CGCG	3 cut(s)	2658, 3517, 4840
NciI	CCSGG	3 cut(s)	135, 262, 1223
NcoI	CCATGG	1 cut(s)	1122
NdeI	CATATG	1 cut(s)	4870
NheI	GCTAGC	2 cut(s)	2705, 5593
NmeAIII	GCCGAG	2 cut(s)	2080, 5653
NmuCI	GTSAC	7 cut(s)	90, 1015, 1079, 1700, 1951, 3322, 3811
NsbI	TGCGCA	1 cut(s)	3302
NsiI	ATGCAT	3 cut(s)	2014, 3751, 4876
NspI	RCATGY	4 cut(s)	646, 2276, 4621, 5483
PaeI	GCATGC	1 cut(s)	646
PagI	TCATGA	1 cut(s)	5562
PciI	ACATGT	1 cut(s)	4617
PciSI	GCTCTTC	2 cut(s)	725, 3733
PctI	GAATGC	5 cut(s)	1321, 1621, 1886, 2327, 3303
PdmI	GAANNNNTTC	1 cut(s)	274
PflMI	CCANNNNNTGG	1 cut(s)	4598
PfoI	TCCNGGA	1 cut(s)	4173
PinAI	ACCGGT	1 cut(s)	2670
Ppu21I	YACGTR	1 cut(s)	4460
PpuMI	RGGWCCY	2 cut(s)	233, 3829
PscI	ACATGT	1 cut(s)	4617
PshBI	ATTAAT	1 cut(s)	3051
PsiI	TTATAA	1 cut(s)	1188
Psp124BI	GAGCTC	4 cut(s)	3111, 3244, 3728, 5411
Psp1406I	AACGTT	1 cut(s)	4253
Psp5II	RGGWCCY	2 cut(s)	233, 3829
Psp6I	CCWGG	7 cut(s)	687, 1350, 1978, 2074, 2178, 2337, 4173
PspGI	CCWGG	7 cut(s)	687, 1350, 1978, 2074, 2178, 2337, 4173
PspPI	GGNCC	8 cut(s)	233, 252, 356, 1814, 2531, 2570, 2785, 3829
PspPPI	RGGWCCY	2 cut(s)	233, 3829
PstI	CTGCAG	2 cut(s)	1780, 2857
PstNI	CAGNNNCTG	6 cut(s)	1760, 1787, 1961, 2075, 3791, 4085
PsuI	RGATCY	8 cut(s)	827, 944, 1671, 1842, 1893, 2020, 2695, 2857
PvuII	CAGCTG	3 cut(s)	4859, 5240, 5303
RsaI	GTAC	9 cut(s)	657, 1144, 1471, 2505, 2628, 2976, 3789, 4440, 4955
RsaNI	GTAC	9 cut(s)	656, 1143, 1470, 2504, 2627, 2975, 3788, 4439, 4954
RseI	CAYNNNNRTG	7 cut(s)	647, 1188, 2499, 4782, 5145, 5276, 5699
SacI	GAGCTC	4 cut(s)	3111, 3244, 3728, 5411
SapI	GCTCTTC	2 cut(s)	725, 3733
Sau96I	GGNCC	8 cut(s)	233, 252, 356, 1814, 2531, 2570, 2785, 3829
ScaI	AGTACT	1 cut(s)	1471
SduI	GDGCHC	9 cut(s)	614, 2779, 3111, 3244, 3670, 3728, 4641, 5181, 5411
SexAI	ACCWGGT	1 cut(s)	2074
SfcI	CTRYAG	5 cut(s)	1776, 2347, 2853, 3705, 5622
SinI	GGWCC	6 cut(s)	233, 356, 1814, 2531, 2570, 3829
SmiMI	CAYNNNNRTG	7 cut(s)	647, 1188, 2499, 4782, 5145, 5276, 5699
SpeI	ACTAGT	2 cut(s)	1472, 5395
SphI	GCATGC	1 cut(s)	646
SspI	AATATT	1 cut(s)	3067
SstI	GAGCTC	4 cut(s)	3111, 3244, 3728, 5411
StyI	CCWWGG	4 cut(s)	204, 438, 1122, 5580
TaiI	ACGT	5 cut(s)	2938, 2992, 3861, 4256, 4462
TatI	WGTACW	6 cut(s)	655, 1142, 1469, 2626, 2974, 4438
TauI	GCSGC	4 cut(s)	3520, 4348, 4609, 5300
TseFI	GTSAC	7 cut(s)	90, 1015, 1079, 1700, 1951, 3322, 3811
Tsp45I	GTSAC	7 cut(s)	90, 1015, 1079, 1700, 1951, 3322, 3811
TspGWI	ACGGA	4 cut(s)	1494, 1627, 3752, 5319
Van91I	CCANNNNNTGG	1 cut(s)	4598
Vha464I	CTTAAG	3 cut(s)	416, 2978, 3182
VpaK11BI	GGWCC	6 cut(s)	233, 356, 1814, 2531, 2570, 3829
VspI	ATTAAT	1 cut(s)	3051
XbaI	TCTAGA	1 cut(s)	2017
XceI	RCATGY	4 cut(s)	646, 2276, 4621, 5483
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1120, 3492, 3567
XmnI	GAANNNNTTC	1 cut(s)	274
ZrmI	AGTACT	1 cut(s)	1471
Zsp2I	ATGCAT	3 cut(s)	2014, 3751, 4876

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.