Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0004779

Physical Location & Seq

Genomic Coordinates Reverse (-)

28166787 .. 28176741

Gene Structure 9955 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g39110.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5730 bp

ATGGAAGGAGACGAGAAGAGGTTGGGGGCTAAGAAGAGATCGAAGTTGATGAAGGTTAATCACAATTCAGATGGTGATGATGAGCCGATTGGGTCGCTGCTGAAGAAGAGGCAGCGGAACCCTAAGAAGGTTAAGCCGGGGTTGGAGGGCGAGAGGGGGAAGAAGGTGGAGGCTGGGGAGGAGGATTTGGGGGGATTGGATGATACCTTGGCGAGTTTCAGGAAGAAGCTCAAGGGTCCTAAGAAGGATTCTGGGGCGAGGGGAAGGAGTTCTAGCTTGGATGTTGTGCAGTCTTCGGATCAGGATGGGGGTTCGGATGTAAAATCAGTGTCGAGAAGTGCAGAGAAAGGTCTGGTTACGGGTGATGATAATGGATGTGATGTGATTAGGGATGTAGAGGCGGAAAACAAGCTTAAAGGAAAGGGGAAAAGACCCAAGGTTTCAGGTCTGGTATCTGGGGAGGGTTCTAATAGCTCTTTAGATCATCAGTTGCAAGATTCATTATCGGCATTTTTTCCTAAGGCACAGTCTAGTGTTAATAAGATGTCTCATCCCTCTTCGAGTCTTAGAGAGAAGAGTGGTTCTCAGGATTTGGAGGATGGACTGAGCCCTAGTTCAGAAGGTGTTGGAGGAAATAGCATGCCTGTGGCTGTGCAGGGACATGGTTCTGTTTCAAAACTGACCCACGAAAAACCAAGATTTGATGATAGTTTGCTGTCTGATTCTGGTTTGGATCCGTTCGGTTCAGTCATTGATCAGAATAAGATAGAGGAAAGAAACAGAGTTTCCCAAGATTCTGACTGCAACAGACAGAATCAAGAGAGGTCTCAAGGACTTTGTTCTATTCCAGATGAGATGATGAAACTTGAGGATAGAAAGAATGAACCCACTGTGGATCCTTCTGGTTTAAATGTTCAAGAGGAACCGTGTAGCTTGGATAAATCTAATGTATCAGATAGCCAGCACTTGCAGAAAACTCAAACTGTTGAGAACAGAATGAGGCACTGCTCTGTGACAAACTCAAGCACTCTAACAAGTTGGGAACTGAAAGGGGAAATGCCTGGGGTTGGTAACAGCGACTCCAAAGGGGGCTTTGATGATGCTTTGTCCATTCAGTCCACAGATGTTCTAGCTAGGTGCACATCAGGTGCAGACTGTGAAATATCTTCTTCAGCTGGAAAACAAATTCTGATGCCTCATTACAATGATGATTTGCTGAACAAATCTAACTCTTCCCCGAATGCACTCAAGAGAGAAGAAACTACTCGTGATTGTGGAACTGCTTACACTGAGGGGCATGATCTTGATTCCAGTCATTTGCAAGAAGAGAATGTGATAATAGCTGATTGTCAGATATCCTCAATCCAGTTCATTCATCAAGCAAAAGCCTTGCAAACTGCCTCCATTCAGAAGGCGAGCTATTGTGAAGACTTGTCTTCTGATGAAGCATCAAAAGAGAGGATTATTCCAAAACATGATTATATTACTGGCAATGAAGAGGTTGATGGTGCTTCTCCTCCTTTATATGCAATGCTAGATGTGAACGAGAGTTTCCCAGAAGACTCAGTATCTCAACCTGATATTGAAAACAAAGACAGCAAGCTATCAGCCATCCTGCGCGCCCCACGGAATATTAGGAAACGCAGGCATGGAGACATGGCTTATGAGGGGGATGTTGATTGGGAGATCTCAACAAATGATCAAGGATTGGATAGTGACAATTCAATTAGAGCGAGAGTGAAACTTGATTCCTCTTCAAGTATTGGCACAGAAGCTGAAAGTGGTGGGGCTGCAGCAGTGTCTGCTGGTCTTAAAGCTCACGCAGTGGGTCCTGTTGAGAAGATTAAATTCAAGGAGATCTTGAAGCGCAGAGGTGGCCTTCAGGATTACTTGGAATGCAGGAATCAGATCTTAGCTCTGTGGAGCAAAGATGTTAGTCGAATTTTGCCTCTCACTGACTGTGGGGTAACAGAGTCTGCTTGTGTGGATGAACCGGGGCGTGCCTCCCTAATCAGGGATATTTATGCTTTTCTAGATCTCAGTGGTTATATAAATGTTGGTATTGCTGCCGAGAAGGATAAAGCAGAACCTGGTTCTAAGCATGACTATAAAATTCTCAGAGAAAAACCTTTTGAGGAAATTTCTGGGGTTTCAGTTGCTGACTCAGAGGATGGAGTTTCCTTTATCATTGGCCAGGTTAAGAATTCAAAAGCTTCCACTGATGCTAAGAATGGAATTACATTTAATAGTGAAAACTTGACTGAGGGAGCCCCAAAAGATAATGGGCATGTTGGAGCAGTGGCTTTGGAATTACTTGATGTGAAAAATCCTGCAGAATGCCAAACTGATTACCTGGAAAACTGTAGTGCTGATGTGAGGTTCCAAAGTCGATTGGACAATATGGATGTTTCGAGTAGTGATCCATCTGGTGAGACATTGGATGGTGGAGTTGTTCCTGTTGTAACTCCAGAGATAAAGCATGAATCACAGAGTATTCAGTCAACACCATATGATCATCTACCGAGTAATAACACCCTGCAATGTGGTCCAGAAGTCAGAAAGGAAATCATTGTCATAGGTGCTGGTCCTGCTGGCTTAACTGCTGCACGGCACTTAAAGCGTCAGGGGTTTTCAGTAAATGTACTTGAAGCTAGGAGTCGAATAGGAGGTCGTGTTTTTACAGACCGGTCATCTCTATCAGTGGCGGTGGATCTTGGTGCTAGCATTATTACTGGTGTTGAGGCTGATTGGGCAACTGAAAGAAGACCCGATCCCTCCTCATTGGTTTGTGCTCAGTTGGGCCTCGAGTTGACTGTATTAAACAGTGATTGCCCTCTTTATGATATTGAAACAGGTCAAAAAGTTCCTGCAGAGCTGGATGAAGCATTGGAAGCAGAGTTCAACAGCCTTCTTGATGATATGGTATTGCTTGTAGCACAGAAGGGAGAACGTGCAGCAAGAATGTCTCTTGAGGAAGGTTTTGAATATGCCCTTAAGAGGCGTCGTATGGCACAGTCAGGGAGTGCTAAAGAAAAAGAATTGCATGGTTCAAGGGATGATGGCAGAACAAATATTGATGGTAGAGTTGCTGATAAAAGTTGTTCTAAGCAAGAGCTATTGAGTCCTCTTGAGAGGAGGGTTATGGATTGGCATTTTGCTAATTTGGAGTATGGTTGTGCTGCTCCGCTTAAGGAGGTATCTCTCCCCCATTGGAACCAAGATGATGTTTATGGTGGCTTTGGGGGAGCTCATTGTATGATTAAAGGGGGTTACAGCACTGTTGTTGAGTCTCTTGGAGAAGGATTGCGCATTCACTTGGATCATGTAGTCACTGATATTTCATATGGCGCTGAGGATGGTGAATTGAATAACAACCAGCGTAACAAAGTCAAAGTCTCCACATCAAATGGGAGTATCTTTTGTGGAGATGCAGTCTTGGTTACAGTGCCTCTTGGGTGCCTAAAAGCAGAAACCATAAAGTTTTCTCCACCATTGCCCCAGTGGAAACATTCTTCTATCACGCGGCTTGGATTTGGCGTTCTTAATAAAGTAGTTTTGGAATTTCCAGATGTCTTTTGGGATGACTCTGTGGACTACTTTGGAGCAACTGCTGAAGAAACAGACCTGAGGGGTCAGTGCTTTATGTTCTGGAATATCAAGAAAACTGTTGGGGCTCCTGTTCTTATAGCTTTAGTGGTTGGTAAGGCAGCTATAGAAGGCCAAAATATGAGTTCTTCTGATCATGTTAACCATGCATTGGTGGCTCTACGTAAATTGTTTGGAGAGGCGTCAGTACCTGATCCAGTTGCATCAGTTGTGACAGATTGGGGCAGGGATCCTTTCAGCTACGGTGCGTACTCGTATGTTGCTGTTGGAGCTTCCGGAAAAGACTATGACATACTAGGGAGACCTGTTAATAACTGCCTATTTTTCGCTGGTGAAGCTACCTGCAAGGAGCATCCCGACACTGTTGGTGGTGCAATGATGAGTGGTCTTCGAGAGGCAGTACGTGTAATTGACATACTGACAACGGGTCATGATTACACAGCAGAAGCAGAAGCAATGGAGTCCATACAGAGTGAGTCTGCCTCTGAGAAGGATGAAGTTCGGGACATAACAAGGAGACTTGATGCGGTTGAACTTTCCAGTGTCCTTTACAAGAACAGGGAAGCCCTACTTCAGGACTTGTTCTTTAATGCAAAAACCACTAAAGGAAGGTTGCATCTGGCCAAAGAGTTGTTGACTCTTCCTGCTGAAACGTTGAAGTCCTTTGCTGGCACCAAAGAGGGGCTAACCACGCTTAACTCATGGATACTGGATTCAATGGGGAAAGCGGGGACTCAACTCCTGCGGCATTGTGTTCGTCTGCTTGTTCTTGTGTCAACAGACCTACTGGCGGTGCGCTTGTCTGGCATTGGGAAAACCGTAAGAGAGAAAGTTTGTGTACACACTAGCCGTGATATACGTGCCATAGCAAGTCAGCTAGTTAGCGTGTGGCTTGAAGTCTTCCGCAGAGAAAAAGCTTCTAATGGAGGACTGAAATTGTCAAGGCAAGCCAGTGGTGTTGATTCATTGAAGAGAAAGACAGTCAGAGACTCATCTTCTGGAAAGCCACCACTACACTTGTATCATGGTGCTTTTGAGCACAAAGGAAGTTTACAGGATTCTGCATCCACCGGAAGCCAATTGCCTTCGAATTCAAATGCGAAGAAAATGAATGGCAAAACCATAAGACTTGAAACAGCAAATTCTTCAAGATTTGGAGGTTCAACAGGCAAACCACATGATGATGAATTCGCTATGACTGAAGAAGAAAGAGCTGCTATTGCTGCTGCTGAAGCAGCTCGCGCAGCAGCACTTGCAGCTGCAAAGGCATATGCATCTTCAGAAGCCAAGAGCAGTTCATTGCTTCAGCTTCCTAAGATTCCGTCGTTTCATAAATTTGCTCGACGGGAGCAGTACGCTCAAATGGATGAGTATGATTTTAGGAGAAAGTGGTCTGGTGGTGTTCTGGGCAGAGAAGATTGCATATCAGAAATAGACTCAAGGAACTGCAAAGTAAGGAACTGGTCTGTTGATTTCTCTGCTGCTTGTGTCAATCTTGACAGTTCAAGAAGGTCTGTTGATAACCTATCAGAGCGGAGCCATCCCAACGAAATCACTAGTCAGTTGAATTTCCGTGAGCACTCAGGAGAGAGTGCTGCCGTTGACAGTAGTATCTATACAAAAGCATGGGTTGATACAGCTGGTAGTGTTGGGGTAAAGGACTATCATGCCATTGAGATGTGGCAATCTCAAGCAGCGGCGGCTGACCCTGATTTCTACCATCCTGATCCGTATGTAAAGGATGAGGAAGATTCAAATACAACTTCTAAAGGACTAAGCTGGAAGCATGACGGACTAGTAAATGAGAGCTCTGTTTCGCAAGTTACTGTAAACAAGGGGTCGTCGAAAAATCATCGTCGAGGAGCAGACCAAATTAAGCACGCAGTTGTTGATTATGTGGCTTCATTGCTTATGCCCCTCTATAAAGCTAAAAAGATTGATAGAGAGGGATACAAGTCAATCATGAAGAAAAGTGCTACCAAGGTTATGGAGCAAGCCACTGATTCAGAGAAAGCAATGGCTGTGTCCGAGTTTCTTGATTTCAAGCGCAGGAACAAGATTCGTGCCTTTGTGGATAAATTGATTGAGAAGCACATGGCAGTGAAACCTGGTGTGAAATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006476 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016575 GO:0018022 GO:0018193 GO:0018205 GO:0019538 GO:0022622 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0051276 GO:0051568 GO:0071704 GO:0071840 GO:0098732 GO:0099402 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Amino_oxidase SWIRM

Protein Analysis

1910

Amino Acids

207.77

Weight (kDa)

5.65

Isoelectric Point (pI)

45.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	607 - 685	3.4e-12	SWIRM domain
Thi4	PF01946	854 - 891	9.2e-06	Thi4 family
DAO	PF01266	856 - 890	5e-06	FAD dependent oxidoreductase
FAD_oxidored	PF12831	856 - 990	9.3e-06	FAD dependent oxidoreductase
NAD_binding_8	PF13450	858 - 914	1.2e-13	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	864 - 1339	9.3e-87	Flavin containing amine oxidoreductase
SCAF11-like_C	PF23030	1826 - 1880	1.8e-06	SCAF11-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004779)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16310 AT4G16310 AT4G16310 AT4G16310 AT4G16310
fragaria_vesca	FvH4_2g39110 FvH4_2g39110 FvH4_2g39110
malus_domestica	MD08G1017300.v1.1 MD15G1016200.v1.1 MD15G1018300.v1.1
prunus_persica	Prupe.1G370000_v2.0.a1 Prupe.1G370000_v2.0.a1 Prupe.1G370000_v2.0.a1 Prupe.1G370000_v2.0.a1
pyrus_communis	pycom08g01510 pycom15g01410 pycom15g01420
rosa_chinensis	RchiOBHm_Chr6g0302221
rosa_laevigata	RLG00000011185
rosa_multiflora	Rmu_sc0003633.1_g000002
rosa_roxburghii	Rroxscaffold_7G00165980
rosa_rugosa	Rorug06G0313100 Rorug06G0313200 Rorug06G0313300 Rorug06G0313300
rosa_samantha	Rh6AG425800 Rh6BG476500 Rh6CG438600 Rh6DG425700
rosa_wichuraiana	Rw6G036880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	3308
Acc36I	ACCTGC	1 cut(s)	3956
AccB1I	GGYRCC	2 cut(s)	3456, 4277
AccB7I	CCANNNNNTGG	1 cut(s)	3757
AccBSI	CCGCTC	1 cut(s)	5140
AccII	CGCG	3 cut(s)	1620, 3523, 4848
AccIII	TCCGGA	1 cut(s)	3881
AclI	AACGTT	1 cut(s)	4259
AcoI	YGGCCR	2 cut(s)	2191, 4227
AcuI	CTGAAG	9 cut(s)	122, 1155, 1865, 3633, 4163, 4827, 4857, 4869, 4895
AcyI	GRCGYC	2 cut(s)	3001, 3788
AdeI	CACNNNGTG	1 cut(s)	1825
AfaI	GTAC	6 cut(s)	2643, 3795, 3857, 4008, 4446, 4961
AfiI	CCNNNNNNNGG	9 cut(s)	127, 1067, 2013, 2014, 2997, 3757, 4180, 4287, 4396
AflII	CTTAAG	2 cut(s)	2993, 3188
AflIII	ACRYGT	1 cut(s)	4009
AgeI	ACCGGT	1 cut(s)	2685
AhdI	GACNNNNNGTC	1 cut(s)	4032
AhlI	ACTAGT	2 cut(s)	5162, 5401
AjnI	CCWGG	5 cut(s)	1060, 2089, 2193, 2352, 5713
AloI	GAACNNNNNNTCC	4 cut(s)	2882, 2914, 3522, 3554
Alw21I	GWGCWC	6 cut(s)	1142, 2794, 3250, 4647, 5187, 5417
Alw44I	GTGCAC	1 cut(s)	1138
AlwNI	CAGNNNCTG	6 cut(s)	1775, 1802, 1976, 2090, 2159, 3797
Ama87I	CYCGRG	1 cut(s)	2804
Aor13HI	TCCGGA	1 cut(s)	3881
AoxI	GGCC	5 cut(s)	1876, 2191, 2800, 3718, 4227
ApaLI	GTGCAC	1 cut(s)	1138
ArsI	GACNNNNNNTTYG	4 cut(s)	2653, 2685, 3378, 3410
AsiGI	ACCGGT	1 cut(s)	2685
Asp700I	GAANNNNTTC	1 cut(s)	268
AspLEI	GCGC	8 cut(s)	1620, 1622, 1869, 3309, 3350, 4404, 4850, 5655
AspS9I	GGNCC	5 cut(s)	236, 1829, 2546, 2585, 2800
AsuC2I	CCSGG	2 cut(s)	138, 1995
AsuHPI	GGTGA	5 cut(s)	86, 374, 2441, 3371, 3950
AsuII	TTCGAA	1 cut(s)	4694
AsuNHI	GCTAGC	1 cut(s)	2720
AvaI	CYCGRG	1 cut(s)	2804
AvaII	GGWCC	4 cut(s)	236, 1829, 2546, 2585
AxyI	CCTNAGG	2 cut(s)	519, 3626
BaeGI	GKGCMC	1 cut(s)	1142
BaeI	ACNNNNGTAYC	4 cut(s)	4610, 4643, 5200, 5233
BalI	TGGCCA	2 cut(s)	2193, 4229
BamHI	GGATCC	3 cut(s)	733, 895, 3835
BanI	GGYRCC	2 cut(s)	3456, 4277
BanII	GRGCYC	5 cut(s)	611, 2272, 3250, 3676, 5417
BauI	CACGAG	1 cut(s)	1266
BbsI	GAAGAC	7 cut(s)	285, 1428, 1434, 1566, 2770, 3986, 4498
Bbv12I	GWGCWC	6 cut(s)	1142, 2794, 3250, 4647, 5187, 5417
BbvCI	CCTCAGC	1 cut(s)	3351
BceAI	ACGGC	3 cut(s)	2624, 4440, 5189
BcgI	CGANNNNNNTGC	2 cut(s)	4343, 4377
BciT130I	CCWGG	5 cut(s)	1062, 2091, 2195, 2354, 5715
BciVI	GTATCC	2 cut(s)	4305, 5549
BclI	TGATCA	4 cut(s)	754, 1699, 2512, 3739
BcnI	CCSGG	2 cut(s)	138, 1995
BcuI	ACTAGT	2 cut(s)	5162, 5401
BfmI	CTRYAG	5 cut(s)	1791, 2331, 2362, 2868, 3711
BfoI	RGCGCY	1 cut(s)	3351
BfrI	CTTAAG	2 cut(s)	2993, 3188
BfuAI	ACCTGC	1 cut(s)	3956
BfuI	GTATCC	2 cut(s)	4305, 5549
BglII	AGATCT	4 cut(s)	1686, 1857, 1908, 2035
Bme1390I	CCNGG	7 cut(s)	138, 1062, 1995, 2091, 2195, 2354, 5715
Bme18I	GGWCC	4 cut(s)	236, 1829, 2546, 2585
BmeRI	GACNNNNNGTC	1 cut(s)	4032
BmeT110I	CYCGRG	1 cut(s)	2804
BmgT120I	GGNCC	5 cut(s)	236, 1829, 2546, 2585, 2800
BmrFI	CCNGG	7 cut(s)	138, 1062, 1995, 2091, 2195, 2354, 5715
BmrI	ACTGGG	1 cut(s)	3493
BmtI	GCTAGC	1 cut(s)	2724
BmuI	ACTGGG	1 cut(s)	3493
BpiI	GAAGAC	7 cut(s)	285, 1428, 1434, 1566, 2770, 3986, 4498
BplI	GAGNNNNNCTC	4 cut(s)	568, 600, 4073, 4105
BpmI	CTGGAG	1 cut(s)	2451
Bpu10I	CCTNAGC	1 cut(s)	3351
Bpu14I	TTCGAA	1 cut(s)	4694
BpuEI	CTTGAG	9 cut(s)	215, 813, 887, 1006, 1232, 2990, 3149, 5029, 5280
BpuMI	CCSGG	2 cut(s)	138, 1995
BsaAI	YACGTR	3 cut(s)	3770, 4010, 4466
BsaHI	GRCGYC	2 cut(s)	3001, 3788
BsaI	GGTCTC	2 cut(s)	831, 3901
BsaJI	CCNNGG	7 cut(s)	137, 207, 435, 1061, 1625, 1994, 5586
BsaWI	WCCGGW	3 cut(s)	2685, 3881, 4676
BsaXI	ACNNNNNCTCC	6 cut(s)	1064, 1094, 2658, 2688, 3417, 3447
Bsc4I	CCNNNNNNNGG	9 cut(s)	127, 1067, 2013, 2014, 2997, 3757, 4180, 4287, 4396
Bse118I	RCCGGY	1 cut(s)	2685
Bse21I	CCTNAGG	2 cut(s)	519, 3626
Bse3DI	GCAATG	9 cut(s)	1498, 1536, 2546, 3491, 3987, 4068, 4904, 5510, 5628
BseAI	TCCGGA	1 cut(s)	3881
BseBI	CCWGG	5 cut(s)	1062, 2091, 2195, 2354, 5715
BseDI	CCNNGG	7 cut(s)	137, 207, 435, 1061, 1625, 1994, 5586
BseLI	CCNNNNNNNGG	9 cut(s)	127, 1067, 2013, 2014, 2997, 3757, 4180, 4287, 4396
BseMI	GCAATG	9 cut(s)	1498, 1536, 2546, 3491, 3987, 4068, 4904, 5510, 5628
BsePI	GCGCGC	1 cut(s)	1618
BseRI	GAGGAG	5 cut(s)	194, 1506, 2767, 3148, 5481
BseSI	GKGCMC	1 cut(s)	1142
BseYI	CCCAGC	1 cut(s)	173
BsgI	GTGCAG	6 cut(s)	308, 360, 674, 1170, 2589, 2973
Bsh1236I	CGCG	3 cut(s)	1620, 3523, 4848
BshFI	GGCC	5 cut(s)	1878, 2193, 2802, 3720, 4229
BshNI	GGYRCC	2 cut(s)	3456, 4277
BshTI	ACCGGT	1 cut(s)	2685
BsiHKAI	GWGCWC	6 cut(s)	1142, 2794, 3250, 4647, 5187, 5417
BsiHKCI	CYCGRG	1 cut(s)	2804
BsiSI	CCGG	5 cut(s)	137, 1994, 2686, 3882, 4677
BslFI	GGGAC	3 cut(s)	672, 4124, 4351
BslI	CCNNNNNNNGG	9 cut(s)	127, 1067, 2013, 2014, 2997, 3757, 4180, 4287, 4396
BsmBI	CGTCTC	1 cut(s)	3
BsmFI	GGGAC	3 cut(s)	672, 4124, 4351
BsmI	GAATGC	4 cut(s)	1246, 1901, 2342, 3309
BsnI	GGCC	5 cut(s)	1878, 2193, 2802, 3720, 4229
Bso31I	GGTCTC	2 cut(s)	831, 3901
BsoBI	CYCGRG	1 cut(s)	2804
Bsp119I	TTCGAA	1 cut(s)	4694
Bsp1286I	GDGCHC	9 cut(s)	611, 1142, 2272, 2794, 3250, 3676, 4647, 5187, 5417
Bsp13I	TCCGGA	1 cut(s)	3881
Bsp1407I	TGTACA	1 cut(s)	4444
BspANI	GGCC	5 cut(s)	1878, 2193, 2802, 3720, 4229
BspEI	TCCGGA	1 cut(s)	3881
BspFNI	CGCG	3 cut(s)	1620, 3523, 4848
BspHI	TCATGA	2 cut(s)	4036, 5568
BspMAI	CTGCAG	3 cut(s)	1795, 2335, 2872
BspMI	ACCTGC	1 cut(s)	3956
BspOI	GCTAGC	1 cut(s)	2724
BspT104I	TTCGAA	1 cut(s)	4694
BspT107I	GGYRCC	2 cut(s)	3456, 4277
BspTI	CTTAAG	2 cut(s)	2993, 3188
BspTNI	GGTCTC	2 cut(s)	831, 3901
BsrBI	CCGCTC	1 cut(s)	5140
BsrDI	GCAATG	9 cut(s)	1498, 1536, 2546, 3491, 3987, 4068, 4904, 5510, 5628
BsrFI	RCCGGY	1 cut(s)	2685
BsrGI	TGTACA	1 cut(s)	4444
BssAI	RCCGGY	1 cut(s)	2685
BssECI	CCNNGG	7 cut(s)	137, 207, 435, 1061, 1625, 1994, 5586
BssHII	GCGCGC	1 cut(s)	1618
BssNI	GRCGYC	2 cut(s)	3001, 3788
BssSI	CACGAG	1 cut(s)	1266
BssT1I	CCWWGG	3 cut(s)	207, 435, 5586
Bst2BI	CACGAG	1 cut(s)	1266
Bst2UI	CCWGG	5 cut(s)	1062, 2091, 2195, 2354, 5715
BstACI	GRCGYC	2 cut(s)	3001, 3788
BstAFI	CTTAAG	2 cut(s)	2993, 3188
BstAPI	GCANNNNNTGC	2 cut(s)	1802, 4859
BstAUI	TGTACA	1 cut(s)	4444
BstBAI	YACGTR	3 cut(s)	3770, 4010, 4466
BstBI	TTCGAA	1 cut(s)	4694
BstDSI	CCRYGG	1 cut(s)	1625
BstENI	CCTNNNNNAGG	1 cut(s)	4178
BstFNI	CGCG	3 cut(s)	1620, 3523, 4848
BstH2I	RGCGCY	1 cut(s)	3351
BstHHI	GCGC	8 cut(s)	1620, 1622, 1869, 3309, 3350, 4404, 4850, 5655
BstNI	CCWGG	5 cut(s)	1062, 2091, 2195, 2354, 5715
BstNSI	RCATGY	2 cut(s)	643, 2291
BstSCI	CCNGG	7 cut(s)	136, 1060, 1993, 2089, 2193, 2352, 5713
BstSFI	CTRYAG	5 cut(s)	1791, 2331, 2362, 2868, 3711
BstSLI	GKGCMC	1 cut(s)	1142
BstSNI	TACGTA	1 cut(s)	3770
BstUI	CGCG	3 cut(s)	1620, 3523, 4848
BstV2I	GAAGAC	7 cut(s)	285, 1428, 1434, 1566, 2770, 3986, 4498
BstX2I	RGATCY	8 cut(s)	733, 895, 1686, 1857, 1908, 2035, 2710, 3835
BstXI	CCANNNNNNTGG	1 cut(s)	5593
BstYI	RGATCY	8 cut(s)	733, 895, 1686, 1857, 1908, 2035, 2710, 3835
Bsu36I	CCTNAGG	2 cut(s)	519, 3626
BsuI	GTATCC	2 cut(s)	4305, 5549
BsuRI	GGCC	5 cut(s)	1878, 2193, 2802, 3720, 4229
BtgI	CCRYGG	1 cut(s)	1625
BtsI	GCAGTG	5 cut(s)	1003, 1803, 1830, 2304, 5712
BveI	ACCTGC	1 cut(s)	3956
CaiI	CAGNNNCTG	6 cut(s)	1775, 1802, 1976, 2090, 2159, 3797
CciI	TCATGA	2 cut(s)	4036, 5568
CfoI	GCGC	8 cut(s)	1620, 1622, 1869, 3309, 3350, 4404, 4850, 5655
Cfr10I	RCCGGY	1 cut(s)	2685
Cfr13I	GGNCC	5 cut(s)	236, 1829, 2546, 2585, 2800
CseI	GACGC	3 cut(s)	2609, 2990, 3777
CsiI	ACCWGGT	2 cut(s)	2089, 5713
Csp6I	GTAC	6 cut(s)	2642, 3794, 3856, 4007, 4445, 4960
CspAI	ACCGGT	1 cut(s)	2685
CspCI	CAANNNNNGTGG	2 cut(s)	4605, 4640
CviQI	GTAC	6 cut(s)	2642, 3794, 3856, 4007, 4445, 4960
DraI	TTTAAA	1 cut(s)	909
DraIII	CACNNNGTG	1 cut(s)	1825
DriI	GACNNNNNGTC	1 cut(s)	4032
EaeI	YGGCCR	2 cut(s)	2191, 4227
Eam1105I	GACNNNNNGTC	1 cut(s)	4032
EciI	GGCGGA	1 cut(s)	416
Ecl136II	GAGCTC	2 cut(s)	3248, 5415
Eco105I	TACGTA	1 cut(s)	3770
Eco130I	CCWWGG	3 cut(s)	207, 435, 5586
Eco24I	GRGCYC	5 cut(s)	611, 2272, 3250, 3676, 5417
Eco31I	GGTCTC	2 cut(s)	831, 3901
Eco32I	GATATC	1 cut(s)	1356
Eco47I	GGWCC	4 cut(s)	236, 1829, 2546, 2585
Eco53kI	GAGCTC	2 cut(s)	3248, 5415
Eco57I	CTGAAG	9 cut(s)	122, 1155, 1865, 3633, 4163, 4827, 4857, 4869, 4895
Eco81I	CCTNAGG	2 cut(s)	519, 3626
Eco88I	CYCGRG	1 cut(s)	2804
EcoICRI	GAGCTC	2 cut(s)	3248, 5415
EcoNI	CCTNNNNNAGG	1 cut(s)	4178
EcoO109I	RGGNCCY	2 cut(s)	236, 1829
EcoRI	GAATTC	3 cut(s)	2203, 4696, 4793
EcoRII	CCWGG	5 cut(s)	1060, 2089, 2193, 2352, 5713
EcoRV	GATATC	1 cut(s)	1356
EcoT14I	CCWWGG	3 cut(s)	207, 435, 5586
EcoT22I	ATGCAT	2 cut(s)	3757, 4882
EcoT38I	GRGCYC	5 cut(s)	611, 2272, 3250, 3676, 5417
ErhI	CCWWGG	3 cut(s)	207, 435, 5586
Esp3I	CGTCTC	1 cut(s)	3
FalI	AAGNNNNNCTT	4 cut(s)	1844, 1876, 4161, 4193
FaqI	GGGAC	3 cut(s)	672, 4124, 4351
FauI	CCCGC	1 cut(s)	4327
FauNDI	CATATG	3 cut(s)	2509, 3343, 4876
FbaI	TGATCA	4 cut(s)	754, 1699, 2512, 3739
FriOI	GRGCYC	5 cut(s)	611, 2272, 3250, 3676, 5417
FspI	TGCGCA	1 cut(s)	3308
GlaI	GCGC	8 cut(s)	1619, 1621, 1868, 3308, 3349, 4403, 4849, 5654
GsaI	CCCAGC	1 cut(s)	177
GsuI	CTGGAG	1 cut(s)	2451
HaeII	RGCGCY	1 cut(s)	3351
HaeIII	GGCC	5 cut(s)	1878, 2193, 2802, 3720, 4229
HapII	CCGG	5 cut(s)	137, 1994, 2686, 3882, 4677
HgaI	GACGC	3 cut(s)	2609, 2990, 3777
HhaI	GCGC	8 cut(s)	1620, 1622, 1869, 3309, 3350, 4404, 4850, 5655
Hin1I	GRCGYC	2 cut(s)	3001, 3788
Hin6I	GCGC	8 cut(s)	1618, 1620, 1867, 3307, 3348, 4402, 4848, 5653
HinP1I	GCGC	8 cut(s)	1618, 1620, 1867, 3307, 3348, 4402, 4848, 5653
HincII	GTYRAC	6 cut(s)	2502, 2811, 3748, 4242, 4383, 5209
HindII	GTYRAC	6 cut(s)	2502, 2811, 3748, 4242, 4383, 5209
HindIII	AAGCTT	3 cut(s)	410, 2211, 4521
HpaI	GTTAAC	1 cut(s)	3748
HpaII	CCGG	5 cut(s)	137, 1994, 2686, 3882, 4677
HphI	GGTGA	5 cut(s)	86, 374, 2441, 3371, 3950
Hpy99I	CGWCG	5 cut(s)	3006, 4933, 4953, 5452, 5466
HpyCH4IV	ACGT	5 cut(s)	2950, 3769, 4009, 4259, 4465
HpySE526I	ACGT	5 cut(s)	2950, 3769, 4009, 4259, 4465
Hsp92I	GRCGYC	2 cut(s)	3001, 3788
HspAI	GCGC	8 cut(s)	1618, 1620, 1867, 3307, 3348, 4402, 4848, 5653
Kpn2I	TCCGGA	1 cut(s)	3881
Ksp22I	TGATCA	4 cut(s)	754, 1699, 2512, 3739
KspAI	GTTAAC	1 cut(s)	3748
MabI	ACCWGGT	2 cut(s)	2089, 5713
MaeII	ACGT	5 cut(s)	2950, 3769, 4009, 4259, 4465
MbiI	CCGCTC	1 cut(s)	5140
MfeI	CAATTG	1 cut(s)	4685
MflI	RGATCY	8 cut(s)	733, 895, 1686, 1857, 1908, 2035, 2710, 3835
MhlI	GDGCHC	9 cut(s)	611, 1142, 2272, 2794, 3250, 3676, 4647, 5187, 5417
MlsI	TGGCCA	2 cut(s)	2193, 4229
MluNI	TGGCCA	2 cut(s)	2193, 4229
MmeI	TCCRAC	4 cut(s)	123, 607, 2272, 3853
Mox20I	TGGCCA	2 cut(s)	2193, 4229
Mph1103I	ATGCAT	2 cut(s)	3757, 4882
MroI	TCCGGA	1 cut(s)	3881
MroXI	GAANNNNTTC	1 cut(s)	268
MscI	TGGCCA	2 cut(s)	2193, 4229
MslI	CAYNNNNRTG	5 cut(s)	644, 1203, 4788, 5282, 5705
Msp20I	TGGCCA	2 cut(s)	2193, 4229
MspA1I	CMGCKG	5 cut(s)	115, 1175, 4865, 5246, 5303
MspCI	CTTAAG	2 cut(s)	2993, 3188
MspI	CCGG	5 cut(s)	137, 1994, 2686, 3882, 4677
MspR9I	CCNGG	7 cut(s)	138, 1062, 1995, 2091, 2195, 2354, 5715
MunI	CAATTG	1 cut(s)	4685
Mva1269I	GAATGC	4 cut(s)	1246, 1901, 2342, 3309
MvaI	CCWGG	5 cut(s)	1062, 2091, 2195, 2354, 5715
MvnI	CGCG	3 cut(s)	1620, 3523, 4848
NciI	CCSGG	2 cut(s)	138, 1995
NdeI	CATATG	3 cut(s)	2509, 3343, 4876
NheI	GCTAGC	1 cut(s)	2720
NmeAIII	GCCGAG	1 cut(s)	2095
NmuCI	GTSAC	4 cut(s)	1012, 1715, 3328, 3817
NsbI	TGCGCA	1 cut(s)	3308
NsiI	ATGCAT	2 cut(s)	3757, 4882
NspI	RCATGY	2 cut(s)	643, 2291
NspV	TTCGAA	1 cut(s)	4694
PaeI	GCATGC	1 cut(s)	643
PaeR7I	CTCGAG	1 cut(s)	2804
PagI	TCATGA	2 cut(s)	4036, 5568
PauI	GCGCGC	1 cut(s)	1618
PctI	GAATGC	4 cut(s)	1246, 1901, 2342, 3309
PdmI	GAANNNNTTC	1 cut(s)	268
PflMI	CCANNNNNTGG	1 cut(s)	3757
PinAI	ACCGGT	1 cut(s)	2685
Ppu21I	YACGTR	3 cut(s)	3770, 4010, 4466
PpuMI	RGGWCCY	2 cut(s)	236, 1829
Psp124BI	GAGCTC	2 cut(s)	3250, 5417
Psp1406I	AACGTT	1 cut(s)	4259
Psp5II	RGGWCCY	2 cut(s)	236, 1829
Psp6I	CCWGG	5 cut(s)	1060, 2089, 2193, 2352, 5713
PspFI	CCCAGC	1 cut(s)	173
PspGI	CCWGG	5 cut(s)	1060, 2089, 2193, 2352, 5713
PspPI	GGNCC	5 cut(s)	236, 1829, 2546, 2585, 2800
PspPPI	RGGWCCY	2 cut(s)	236, 1829
PspXI	VCTCGAGB	1 cut(s)	2804
PstI	CTGCAG	3 cut(s)	1795, 2335, 2872
PstNI	CAGNNNCTG	6 cut(s)	1775, 1802, 1976, 2090, 2159, 3797
PsuI	RGATCY	8 cut(s)	733, 895, 1686, 1857, 1908, 2035, 2710, 3835
PteI	GCGCGC	1 cut(s)	1618
PvuII	CAGCTG	3 cut(s)	1175, 4865, 5246
RsaI	GTAC	6 cut(s)	2643, 3795, 3857, 4008, 4446, 4961
RsaNI	GTAC	6 cut(s)	2642, 3794, 3856, 4007, 4445, 4960
RseI	CAYNNNNRTG	5 cut(s)	644, 1203, 4788, 5282, 5705
SacI	GAGCTC	2 cut(s)	3250, 5417
Sau96I	GGNCC	5 cut(s)	236, 1829, 2546, 2585, 2800
ScrFI	CCNGG	7 cut(s)	138, 1062, 1995, 2091, 2195, 2354, 5715
SduI	GDGCHC	9 cut(s)	611, 1142, 2272, 2794, 3250, 3676, 4647, 5187, 5417
SexAI	ACCWGGT	2 cut(s)	2089, 5713
SfcI	CTRYAG	5 cut(s)	1791, 2331, 2362, 2868, 3711
Sfr274I	CTCGAG	1 cut(s)	2804
SfuI	TTCGAA	1 cut(s)	4694
SinI	GGWCC	4 cut(s)	236, 1829, 2546, 2585
SlaI	CTCGAG	1 cut(s)	2804
SmiMI	CAYNNNNRTG	5 cut(s)	644, 1203, 4788, 5282, 5705
SnaBI	TACGTA	1 cut(s)	3770
SpeI	ACTAGT	2 cut(s)	5162, 5401
SphI	GCATGC	1 cut(s)	643
SspI	AATATT	2 cut(s)	1633, 3073
SstI	GAGCTC	2 cut(s)	3250, 5417
StyD4I	CCNGG	7 cut(s)	136, 1060, 1993, 2089, 2193, 2352, 5713
StyI	CCWWGG	3 cut(s)	207, 435, 5586
TaiI	ACGT	5 cut(s)	2953, 3772, 4012, 4262, 4468
TatI	WGTACW	2 cut(s)	2641, 4444
TauI	GCSGC	4 cut(s)	3526, 4354, 5306, 5309
TseFI	GTSAC	4 cut(s)	1012, 1715, 3328, 3817
Tsp45I	GTSAC	4 cut(s)	1012, 1715, 3328, 3817
TspGWI	ACGGA	6 cut(s)	726, 1642, 4917, 5168, 5325, 5412
Van91I	CCANNNNNTGG	1 cut(s)	3757
Vha464I	CTTAAG	2 cut(s)	2993, 3188
VneI	GTGCAC	1 cut(s)	1138
VpaK11BI	GGWCC	4 cut(s)	236, 1829, 2546, 2585
XagI	CCTNNNNNAGG	1 cut(s)	4178
XbaI	TCTAGA	1 cut(s)	2032
XceI	RCATGY	2 cut(s)	643, 2291
XcmI	CCANNNNNNNNNTGG	2 cut(s)	3498, 3573
XhoI	CTCGAG	1 cut(s)	2804
XmnI	GAANNNNTTC	1 cut(s)	268
Zsp2I	ATGCAT	2 cut(s)	3757, 4882

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.