Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0004779

Physical Location & Seq

Genomic Coordinates Forward (+)

1319733 .. 1328087

Gene Structure 8355 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1017300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5703 bp

ATGGTTGACAAAATGGATGGGGAGGACAAGAAGTCCGGCTTTAAGAAAAGATCAAAATTTCTTGAGGCGAATATGGTTGATTCTGATGATGATGAGCCAATTGGGTCACTGTTGAAGTTAAAGAGGCAGAGAAACCCTAAGAAGGTTAAGCCGCGGTCAGAGGGTGGCGGCGAAAGGGGCCAGAAGATTGAGGACGAAGAAGAGTATTTGGGGGGGCTGGATGATACCTTGGCAAGTTTGAGGAAGAAGTTGAAGGGTCCTAAGAAAGATTCTGGGACTGGAACTATGAGGGGGAGGAGTTTTGATTTGGATGGTGTACAGTCTTTGGATCGGTCCTCTAATGGGCATGTGGATGACGGGGGATTAGATGCAAAATCGGTGTCAAGAGTTTTAGAGAAAGGCCCTGTCATGGGTGATGATGGATCTGATGTGACTATCGATATAGGGGTAGAAAACAAGCTTAATGGAAATGTAAGGGGAAAGAGACCCAAGATTTCTAGGTCTATGAGATTTGGGGAAGGTTCTAATAGCTCTTTGGATCATCATCTGAGAGATTCATTACCAGCATTTTCCCGGAAGTCACAATCTGGTTTGGTAATGAATTCTCGTGCCTCTTCACGTCCAAAGGAGAAGAGTGGTTCTAAGGTTTTGGAGGAAGGGTTGAAACCTAGTGTGGATGGTGTTGCACAAAACACGCCTTTATCTGATTCAAATTCATTGGATTCAGCCTCTGATCATTGTAAGGCAGATGAAAGTCAAAGTTTTGATTACAGATTATGTCAAGCCTCTAACCTCCACAGGGAGAATCAAGAGACATTCAATGATAAAAAGCATAAAAGGCCTTACAAAATCGTTGCAGAAGATCGAGCTCCTGTCTACTCACATTCAGGATTTGATTCCAAATTGATTAACAATGAAGCCATAGTGGCTCCTTCTGGTTCAAATTTTCAAGAGGGACCATGCAGCTCAGATGAAGTTAATGATGGAGACAGCAAACATTTGACACAGCAAATGCGAACTTTTGAGGATGGATTGAAGCACTGCTCTATAGGAGGTTCCATTCAGTCCAAGGATGTTTTGGGTAGATGCACCTCAGCTGCAGACTGTGAAACCTCTTCTCCAGCTGGGAAAGGAATTATGCGGCCTCATTGTAATGATGATCTTCTGGATAAGTCATGTGAAAATACGTTGGAGGACAAACATTTGGTGTCCTCCTTACATCTACAACAGAACTCCTTGACATGCCATGTGAAGGTTGAGGATGAGCTTGATTCTGACAGATGTCCAAACTTTTCCCAGCATACTCAACATCAGTTGTTGAACTTTGCCTCAAACACTGTGGGGATGGAAGACACTCACAGTAATTGTAATGGTCTAATTACTTACACTAAGAATCCTGGGCTTGCTTCTGGTCCTTTACAGGAGAAAAATGATGTTCCAATTCATGATCATCTTATCACTTGTGAAGAGGCTGATGAAAATGAGAGTTGCCCAGAAGACACAGTATCTCTACCAGATGTTGAAAACAAAAGCACTAAGCTATCAGCTATCCAGCGTGTGGGGCGCAATGTTAGAAAGCGTAGGCATGGAGACATGGCTTATGAGGGGGATGCTGATTGGGACGTATTGATAAATGATCAAGGTTCAGATGGTGACAATTCATTTAGAATGAGAGTGAAGTTTGATTCCTCTTCAAGTATTGGTACAGAGTCTGAAAGTGGTGAGGCTGCAGCAGTGTCTGCTGGTCTTAAAGCCAATGCAGTCGGTCCTGTTGAGAAGATCAAATTCAAAGAGATTTTGAAGCGCAGAGGTGGGGTTCAGGACTATTTGGAATGCAGGAATCAGATCCTTGCTCTGTGGAATAAAGATGTTAGTCGAATTTTGCCTCTTACTGATTGTGGGGTAACAGATACTTCTTGTGCGGATGATTCACCTCGTGCTTCCCTAATTAAGGATATTTATGCATTCCTTGATCTCAGTGGCTATATAAATATTGGAATTGCTCGTGAGAAGGATAAAGCAGAACCTGGTTCCAAGCATGACTATAAAATTTTGAGAGAAAAAAATTTCGAGGAAATTTCTGGGGTTTCAGTTGCTGATTCAGAGGATGGAGTTTCCTTTATCATAGGCCAGGTTAAGAGTTCTAAAACTAAAATTGATGTGAAGAGTGGTGTCATAATCAAAAGCAACAACTCGACGCAGGGAGTCTCAAGAGACAATGAGCTTGTTACTACAGTGGCATTGGAATTATCCAATGCAACAAACCATGCTGAGTGCAAGGCAGATCACCTGGAAAACACAAGTGTTGATGCAAGGTTACAAAGTAAATTGGACAATATGGATGTTTCAAGTAGTGTTCCAATTGGTGAGACATTGGGTGATGGAGGCATCCCTCTTGTAACTCCAGAGTTAAAGAATGTATCACATAGTACTCAGTGTGCATCGCAAGATCATGCAGTGAGAAATAATAATCTGCAATGCGGTCTGGAAGTCAAAAAGAAAATCATTGTCATAGGTGCTGGTCCTGCTGGATTAACTGCTGCACGCCACTTGCAACGTCAGGGCTTTTCAGTCACTATATTGGAAGCTAGGAGTAGGATAGGGGGCCGTGTTTATACAGACAGGTCATCTCTATCAGTTCCTGTGGATCTTGGTGCTAGCATTATAACTGGTGTTGAGGCTGATTGGGCAACTGAAAGACGACCAGACCCCTCCTCTTTGGTTTGTGCTCAGCTGGGCCTTGAGTTGACTGTCTTAAACAGTGATTGCCCTCTTTATGACATTGCAACAGGTGAAAAGGTTCCTGCAGATCTGGATGAAGCATTGGAAGCAGAGTTCAACAGCCTTCTCGATGACATGGTATTGCTTGTTGCAAAGGAGGGAGAACAGACAAGATTGTCCCTCGAGGAAGGTTTGGAATATGCCCTCAAGAGGCGTCGTATGGCAAAAACAGGGACTAGTATTGAAGCGAAAGAACTGAATGGTTTAATGGATGGTTTCATTGATGCCAAAAAAAGTATTGATAGAGCTGAAGAAAGTTGTCAAAAGCAAGAGGTTTTGAGCCCTCTTGAGAGGAGGGTCATGGATTGGCATTTTGCCAATTTGGAATATGGTTGTGCTACTCTGCTGAAGGAGGTATCTCTCCCCAACTGGAACCAGGATGATGTTTATGGTGGCTTTGGAGGAGCTCACTGCATGATTAAAGGGGGTTATAGCACTGTTATTGAGTCTCTTGGAGAAGGACTTCAAATTCGCTTGAATCATGTAGTAACTGATGTTTCATATGGCACCAAGGATGCTGGATTGAATACTAACCCGGGTAACAAAGTCAAGGTTTCCACATCTAATGGCAACGATTTTTCGGGAGATGCAGTCTTGGTAACAGTACCTCTTGGTTGCTTAAAAGCAGAAACTATCAAATTTTCCCCACCGTTACCCCACTGGAAACATTCTTCCATCCTGCGACTTGGGTTTGGAGTTCTTAATAAAGTAGTTTTGGAATTTCCGGATGTCTTTTGGGATGACTCTGTGGATTACTTTGGAGCAACTGCTGAGGAAACAGACCTGAGGGGCCAGTGCTTTATGTTCTGGAATGTCAAGAAAACCGTTGGGGCTCCTGTTCTTATAGCTTTAGTGGTTGGTAAGGCAGCTATAGATGGGCAAAAGATGAGCCCTTCTGAACATGTTAACCATGCTTTAGCGGTACTTCGTAAATTGTTTGGAGAGGCTTCAGTACCTGATCCTGTTGCATCAGTTGTGACAGATTGGGGTAGGGATCCTTTCAGCTATGGTGCCTACTCATATGTTGCTGTTGGAGCTTCGGGGGAAGATTATGATATACTAGGGAGACCTGTTGAGAACTGCCTATTTTTTGCTGGTGAAGCTACCTGCAAGGAGCATCCTGACACTGTTGGTGGTGCGATGATGAGTGGCCTTCGGGAGGCAGTGCGTATAATTGACATACTTACTACTGGAAATGATTACACAGCAGAAGCAGAGGCAATTGCGGGCATTCAGAGACAATCAGATTCTGAAAGGGATGAAGTTAGAGACATGACAAGGAGACTTGATGCAGTTGAACTTTCAAATGTCCTTTACAAGAACAAGGAGGCCCTACTCCAGGACATGTTCTTTAATGCAAAGACCACTAAAGGAAGGTTGCATCTGGCCAAAGAGTTATTAAGTCTTCCCGCTGAAACGTTGAAGTCCTTTGCTGGCACCAAAGAAGGGCTGACTATTCTCAACTTGTGGATACTGGACTCGATGGGGAAGGCTGGGACTCAACTCTTGCGGCATTGTGTTCGGCTCCTTGTGCTTGTTTCAACAGACCTACTGGCTGTGCGCTTGTCTGGCATTGGGAAGACTGTAAGAGAAAAAGTTTGTGTACATACGAGCCGTGATATACGTGCCATAGCAAGTCAGCTGGTTAATGTGTGGCTTGAAGTTTTTCGCAAGGAAAAAGCTTCCAATGGTGCATTGAAGTTGTCAAGGCAAGCAACTGCTGCAGATGCATGGAAGAGAAAAACAATTAGAGATCCATCTTCTAGTAAGCCACCTCTACACACATTTCATTGTGGTTTGGAGCACAAAGGAAGCTTACAGGATTCAGCATCCACCGCAAGCCATTTGCCTTTGAATGCAAATGGTAAGAAAGTGAATGGCAAATCCATTAAGGGTGAAACAGCAAATTCCTCAAAATCAGAGATCAATTCATCAAGGTTTCGTGGTTCAACAGGCAGGCCACATTCTGAGCTAAAGGAGATTGACGTTGCTGTGACAGAAGCAGAACGAGCTGCCATTGCTGCTGCTGAAGCAGCCCGTGCAGCAGCACTTGCAGCTGCCGAGGCATATGCATCTTCAGAAGCCAAGAGCAGTACACTGCTTCAGCTTCCCAAGATTCCCTCATTTCATAAGTTTGCTCGACGGGAGCAGTACCCTCAAATGGATGAGTATGATTTGAGGAGGAAGTGGTCTGGTGGTGTTTTGGGTAGACAAGATTGTGTATCAGAAATAGACTCCAGGAACTGCAAAGTTAGGGACTGGTCAGTTGATTTCTCTGCTGCTTGCGTCAATATTGATAGTTCAAGAATGTCAGTCGATAACCTCTCGCAGCGGAGCAATCCAAATGAGACTGCTAGTCAAACGAATTTCAGAGAGCACTCAGGAGAGAGTGCTGCTGTCGACAGCAGTATTTATACAAGAGCATGGGTTGATACAGCTGGTAGTGCCGGGATAAAGGATTATCATGCCATTGAGATGTGGCAATCTCAAGCAGCTGCAGCAGACCCTGATTTTTTCCATTCAGCACCATATATAAATGACGAGGAAGATTCAAATACGACTTCGAGAAAACACAGCTGGAAGAATGAAGGACCTGTAAATGAGAGCTCTGTTTCCCAAGTTACCATGAACAAGGAGTCGTTAAAAAGTCATCATCGAGGAGCAGATAATATTAAGCAGGCTGTTGTCGATTATGTGGCTTCATTGCTTATGCCCCTTTATAAAGCTAAAAAAATAGATAGAGAGGGATACAAGTCAATCATGAAGAAAAGTGCTACCAAGGTCATGGAGCTGGCCACAGACTCAGAAAAAGCAATGGCTGTTTCTGAGTTTCTTGATTTCAAGCGCAGGAACAAGATCCGTGCATTTGTGGATACATTGATTGAGAGGCACATGGCAGCAAAGCCCACAATGAAATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006476 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016575 GO:0018022 GO:0018193 GO:0018205 GO:0019538 GO:0022622 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0051276 GO:0051568 GO:0071704 GO:0071840 GO:0098732 GO:0099402 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Amino_oxidase SWIRM

Protein Analysis

1901

Amino Acids

207.54

Weight (kDa)

5.93

Isoelectric Point (pI)

39.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	586 - 664	5.5e-13	SWIRM domain
Thi4	PF01946	832 - 871	5.1e-06	Thi4 family
DAO	PF01266	834 - 869	1.4e-07	FAD dependent oxidoreductase
NAD_binding_8	PF13450	837 - 893	5.2e-15	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	843 - 1319	2.2e-92	Flavin containing amine oxidoreductase
SCAF11-like_C	PF23030	1817 - 1870	1.7e-06	SCAF11-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0004779)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16310 AT4G16310 AT4G16310 AT4G16310 AT4G16310
fragaria_vesca	FvH4_2g39110 FvH4_2g39110 FvH4_2g39110
malus_domestica	MD08G1017300.v1.1 MD15G1016200.v1.1 MD15G1018300.v1.1
prunus_persica	Prupe.1G370000_v2.0.a1 Prupe.1G370000_v2.0.a1 Prupe.1G370000_v2.0.a1 Prupe.1G370000_v2.0.a1
pyrus_communis	pycom08g01510 pycom15g01410 pycom15g01420
rosa_chinensis	RchiOBHm_Chr6g0302221
rosa_laevigata	RLG00000011185
rosa_multiflora	Rmu_sc0003633.1_g000002
rosa_roxburghii	Rroxscaffold_7G00165980
rosa_rugosa	Rorug06G0313100 Rorug06G0313200 Rorug06G0313300 Rorug06G0313300
rosa_samantha	Rh6AG425800 Rh6BG476500 Rh6CG438600 Rh6DG425700
rosa_wichuraiana	Rw6G036880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	2666, 5502
AasI	GACNNNNNNGTC	1 cut(s)	2896
AbsI	CCTCGAGG	1 cut(s)	2903
Acc36I	ACCTGC	1 cut(s)	3896
AccB1I	GGYRCC	3 cut(s)	3287, 3791, 4217
AccB7I	CCANNNNNTGG	1 cut(s)	1558
AccI	GTMKAC	3 cut(s)	876, 4990, 5181
AccII	CGCG	1 cut(s)	154
AccIII	TCCGGA	1 cut(s)	3505
AclI	AACGTT	1 cut(s)	4199
AcoI	YGGCCR	2 cut(s)	4167, 5574
AcuI	CTGAAG	6 cut(s)	3051, 3149, 3714, 4830, 4842, 4868
AcyI	GRCGYC	1 cut(s)	2935
AdeI	CACNNNGTG	1 cut(s)	1937
AfaI	GTAC	9 cut(s)	318, 1705, 2431, 3387, 3705, 3735, 4386, 4876, 4934
AflIII	ACRYGT	2 cut(s)	3682, 4125
AhdI	GACNNNNNGTC	2 cut(s)	31, 5136
AhlI	ACTAGT	1 cut(s)	2957
AjiI	CACGTC	1 cut(s)	620
AjnI	CCWGG	7 cut(s)	1396, 2026, 2130, 2289, 3156, 4119, 5018
AloI	GAACNNNNNNTCC	2 cut(s)	2819, 2851
Alw21I	GWGCWC	6 cut(s)	871, 2731, 3190, 4587, 5160, 5390
Ama87I	CYCGRG	2 cut(s)	2903, 3316
Aor13HI	TCCGGA	1 cut(s)	3505
ArsI	GACNNNNNNTTYG	4 cut(s)	365, 397, 3234, 3266
Asp700I	GAANNNNTTC	3 cut(s)	2799, 3243, 4446
AspLEI	GCGC	4 cut(s)	1566, 1806, 4344, 5628
AsuC2I	CCSGG	4 cut(s)	574, 3317, 3318, 5230
AsuNHI	GCTAGC	1 cut(s)	2657
AvaI	CYCGRG	2 cut(s)	2903, 3316
AvaII	GGWCC	7 cut(s)	257, 333, 956, 1412, 1766, 2522, 5372
AxyI	CCTNAGG	1 cut(s)	3566
BalI	TGGCCA	2 cut(s)	4169, 5576
BamHI	GGATCC	1 cut(s)	3775
BanI	GGYRCC	3 cut(s)	3287, 3791, 4217
BanII	GRGCYC	6 cut(s)	871, 3065, 3190, 3616, 3674, 5390
BauI	CACGAG	3 cut(s)	606, 1935, 2004
BbsI	GAAGAC	4 cut(s)	1356, 1503, 4178, 4367
Bbv12I	GWGCWC	6 cut(s)	871, 2731, 3190, 4587, 5160, 5390
BbvCI	CCTCAGC	2 cut(s)	1093, 3552
BceAI	ACGGC	2 cut(s)	2592, 4380
BcgI	CGANNNNNNTGC	4 cut(s)	4283, 4317, 4832, 4866
BciT130I	CCWGG	7 cut(s)	1398, 2028, 2132, 2291, 3158, 4121, 5020
BciVI	GTATCC	3 cut(s)	4245, 5522, 5647
BclI	TGATCA	3 cut(s)	733, 1447, 1636
BcnI	CCSGG	4 cut(s)	574, 3317, 3318, 5230
BcuI	ACTAGT	1 cut(s)	2957
BfaI	CTAG	8 cut(s)	498, 669, 2589, 2658, 2958, 3842, 4545, 5136
BfmI	CTRYAG	8 cut(s)	1047, 1098, 1728, 2232, 2805, 3651, 4503, 5277
BfuAI	ACCTGC	1 cut(s)	3896
BfuI	GTATCC	3 cut(s)	4245, 5522, 5647
BglI	GCCNNNNNGGC	1 cut(s)	926
BglII	AGATCT	1 cut(s)	2809
BlpI	GCTNAGC	1 cut(s)	2730
BmcAI	AGTACT	1 cut(s)	2431
Bme18I	GGWCC	7 cut(s)	257, 333, 956, 1412, 1766, 2522, 5372
BmeRI	GACNNNNNGTC	2 cut(s)	31, 5136
BmeT110I	CYCGRG	2 cut(s)	2903, 3316
BmgBI	CACGTC	1 cut(s)	620
BmtI	GCTAGC	1 cut(s)	2661
BoxI	GACNNNNGTC	1 cut(s)	1281
BpiI	GAAGAC	4 cut(s)	1356, 1503, 4178, 4367
BpmI	CTGGAG	4 cut(s)	1104, 2388, 4103, 5002
Bpu10I	CCTNAGC	2 cut(s)	1093, 3552
Bpu1102I	GCTNAGC	1 cut(s)	2730
BpuEI	CTTGAG	6 cut(s)	83, 2194, 2762, 2912, 3089, 5253
BpuMI	CCSGG	4 cut(s)	574, 3317, 3318, 5230
Bsa29I	ATCGAT	1 cut(s)	438
BsaAI	YACGTR	1 cut(s)	4406
BsaBI	GATNNNNATC	1 cut(s)	543
BsaHI	GRCGYC	1 cut(s)	2935
BsaI	GGTCTC	2 cut(s)	478, 3841
BsaJI	CCNNGG	8 cut(s)	152, 228, 1068, 1397, 3291, 3316, 4842, 5559
BsaWI	WCCGGW	1 cut(s)	3505
BsaXI	ACNNNNNCTCC	6 cut(s)	644, 674, 1102, 1132, 3357, 3387
Bse1I	ACTGG	9 cut(s)	283, 2674, 3155, 3446, 3574, 3976, 4260, 4338, 5045
Bse21I	CCTNAGG	1 cut(s)	3566
Bse3DI	GCAATG	6 cut(s)	1573, 2483, 2781, 4797, 5483, 5601
Bse8I	GATNNNNATC	1 cut(s)	543
BseAI	TCCGGA	1 cut(s)	3505
BseBI	CCWGG	7 cut(s)	1398, 2028, 2132, 2291, 3158, 4121, 5020
BseCI	ATCGAT	1 cut(s)	438
BseDI	CCNNGG	8 cut(s)	152, 228, 1068, 1397, 3291, 3316, 4842, 5559
BseJI	GATNNNNATC	1 cut(s)	543
BseMI	GCAATG	6 cut(s)	1573, 2483, 2781, 4797, 5483, 5601
BseNI	ACTGG	9 cut(s)	283, 2674, 3155, 3446, 3574, 3976, 4260, 4338, 5045
BseRI	GAGGAG	6 cut(s)	310, 2704, 3088, 3198, 4975, 5454
BseYI	CCCAGC	4 cut(s)	1124, 1296, 2734, 4274
BsgI	GTGCAG	2 cut(s)	2526, 4842
Bsh1236I	CGCG	1 cut(s)	154
BshNI	GGYRCC	3 cut(s)	3287, 3791, 4217
BshVI	ATCGAT	1 cut(s)	438
BsiHKAI	GWGCWC	6 cut(s)	871, 2731, 3190, 4587, 5160, 5390
BsiHKCI	CYCGRG	2 cut(s)	2903, 3316
BsiSI	CCGG	5 cut(s)	36, 574, 3317, 3506, 5229
BslFI	GGGAC	7 cut(s)	289, 969, 1634, 2884, 2968, 4291, 5051
BsmFI	GGGAC	7 cut(s)	289, 969, 1634, 2884, 2968, 4291, 5051
BsmI	GAATGC	4 cut(s)	1838, 1964, 4011, 4642
Bso31I	GGTCTC	2 cut(s)	478, 3841
BsoBI	CYCGRG	2 cut(s)	2903, 3316
Bsp1286I	GDGCHC	9 cut(s)	871, 2731, 3065, 3190, 3616, 3674, 4587, 5160, 5390
Bsp13I	TCCGGA	1 cut(s)	3505
Bsp1407I	TGTACA	2 cut(s)	316, 4384
Bsp1720I	GCTNAGC	1 cut(s)	2730
BspDI	ATCGAT	1 cut(s)	438
BspEI	TCCGGA	1 cut(s)	3505
BspFNI	CGCG	1 cut(s)	154
BspHI	TCATGA	2 cut(s)	1444, 5541
BspMAI	CTGCAG	5 cut(s)	1102, 1732, 2809, 4507, 5281
BspMI	ACCTGC	1 cut(s)	3896
BspOI	GCTAGC	1 cut(s)	2661
BspT107I	GGYRCC	3 cut(s)	3287, 3791, 4217
BspTNI	GGTCTC	2 cut(s)	478, 3841
BsrDI	GCAATG	6 cut(s)	1573, 2483, 2781, 4797, 5483, 5601
BsrGI	TGTACA	2 cut(s)	316, 4384
BsrI	ACTGG	9 cut(s)	283, 2674, 3155, 3446, 3574, 3976, 4260, 4338, 5045
BssECI	CCNNGG	8 cut(s)	152, 228, 1068, 1397, 3291, 3316, 4842, 5559
BssNI	GRCGYC	1 cut(s)	2935
BssSI	CACGAG	3 cut(s)	606, 1935, 2004
BssT1I	CCWWGG	4 cut(s)	228, 1068, 3291, 5559
Bst2BI	CACGAG	3 cut(s)	606, 1935, 2004
Bst2UI	CCWGG	7 cut(s)	1398, 2028, 2132, 2291, 3158, 4121, 5020
Bst6I	CTCTTC	8 cut(s)	195, 619, 626, 1120, 1461, 1696, 2159, 4511
BstACI	GRCGYC	1 cut(s)	2935
BstAPI	GCANNNNNTGC	4 cut(s)	1739, 4502, 4820, 4832
BstAUI	TGTACA	2 cut(s)	316, 4384
BstBAI	YACGTR	1 cut(s)	4406
BstDSI	CCRYGG	1 cut(s)	152
BstENI	CCTNNNNNAGG	3 cut(s)	1949, 3938, 4118
BstFNI	CGCG	1 cut(s)	154
BstHHI	GCGC	4 cut(s)	1566, 1806, 4344, 5628
BstNI	CCWGG	7 cut(s)	1398, 2028, 2132, 2291, 3158, 4121, 5020
BstNSI	RCATGY	4 cut(s)	350, 1245, 3686, 4129
BstPAI	GACNNNNGTC	1 cut(s)	1281
BstSFI	CTRYAG	8 cut(s)	1047, 1098, 1728, 2232, 2805, 3651, 4503, 5277
BstUI	CGCG	1 cut(s)	154
BstV2I	GAAGAC	4 cut(s)	1356, 1503, 4178, 4367
BstX2I	RGATCY	7 cut(s)	422, 1845, 2647, 2809, 3775, 4534, 5637
BstXI	CCANNNNNNTGG	1 cut(s)	5566
BstYI	RGATCY	7 cut(s)	422, 1845, 2647, 2809, 3775, 4534, 5637
Bsu15I	ATCGAT	1 cut(s)	438
Bsu36I	CCTNAGG	1 cut(s)	3566
BsuI	GTATCC	3 cut(s)	4245, 5522, 5647
BsuTUI	ATCGAT	1 cut(s)	438
BtgI	CCRYGG	1 cut(s)	152
BtgZI	GCGATG	2 cut(s)	2427, 3935
BtrI	CACGTC	1 cut(s)	620
BtsI	GCAGTG	6 cut(s)	1039, 1740, 2463, 3190, 3951, 4877
BveI	ACCTGC	1 cut(s)	3896
CciI	TCATGA	2 cut(s)	1444, 5541
CfoI	GCGC	4 cut(s)	1566, 1806, 4344, 5628
Cfr42I	CCGCGG	1 cut(s)	155
Cfr9I	CCCGGG	1 cut(s)	3316
ClaI	ATCGAT	1 cut(s)	438
CseI	GACGC	3 cut(s)	2206, 2924, 5056
CsiI	ACCWGGT	1 cut(s)	2026
Csp6I	GTAC	9 cut(s)	317, 1704, 2430, 3386, 3704, 3734, 4385, 4875, 4933
CspCI	CAANNNNNGTGG	2 cut(s)	1320, 1355
CviQI	GTAC	9 cut(s)	317, 1704, 2430, 3386, 3704, 3734, 4385, 4875, 4933
DraIII	CACNNNGTG	1 cut(s)	1937
DrdI	GACNNNNNNGTC	1 cut(s)	2896
DriI	GACNNNNNGTC	2 cut(s)	31, 5136
DseDI	GACNNNNNNGTC	1 cut(s)	2896
EaeI	YGGCCR	2 cut(s)	4167, 5574
Eam1104I	CTCTTC	8 cut(s)	195, 619, 626, 1120, 1461, 1696, 2159, 4511
Eam1105I	GACNNNNNGTC	2 cut(s)	31, 5136
EarI	CTCTTC	8 cut(s)	195, 619, 626, 1120, 1461, 1696, 2159, 4511
Ecl136II	GAGCTC	3 cut(s)	869, 3188, 5388
Eco130I	CCWWGG	4 cut(s)	228, 1068, 3291, 5559
Eco147I	AGGCCT	1 cut(s)	841
Eco24I	GRGCYC	6 cut(s)	871, 3065, 3190, 3616, 3674, 5390
Eco31I	GGTCTC	2 cut(s)	478, 3841
Eco47I	GGWCC	7 cut(s)	257, 333, 956, 1412, 1766, 2522, 5372
Eco53kI	GAGCTC	3 cut(s)	869, 3188, 5388
Eco57I	CTGAAG	6 cut(s)	3051, 3149, 3714, 4830, 4842, 4868
Eco81I	CCTNAGG	1 cut(s)	3566
Eco88I	CYCGRG	2 cut(s)	2903, 3316
EcoICRI	GAGCTC	3 cut(s)	869, 3188, 5388
EcoNI	CCTNNNNNAGG	3 cut(s)	1949, 3938, 4118
EcoO109I	RGGNCCY	4 cut(s)	257, 401, 4111, 5372
EcoRI	GAATTC	1 cut(s)	601
EcoRII	CCWGG	7 cut(s)	1396, 2026, 2130, 2289, 3156, 4119, 5018
EcoT14I	CCWWGG	4 cut(s)	228, 1068, 3291, 5559
EcoT22I	ATGCAT	3 cut(s)	1966, 4513, 4855
EcoT38I	GRGCYC	6 cut(s)	871, 3065, 3190, 3616, 3674, 5390
ErhI	CCWWGG	4 cut(s)	228, 1068, 3291, 5559
FalI	AAGNNNNNCTT	2 cut(s)	23, 55
FaqI	GGGAC	7 cut(s)	289, 969, 1634, 2884, 2968, 4291, 5051
FauI	CCCGC	2 cut(s)	4000, 4198
FauNDI	CATATG	3 cut(s)	3283, 3802, 4849
FbaI	TGATCA	3 cut(s)	733, 1447, 1636
FblI	GTMKAC	3 cut(s)	876, 4990, 5181
FriOI	GRGCYC	6 cut(s)	871, 3065, 3190, 3616, 3674, 5390
FspBI	CTAG	8 cut(s)	498, 669, 2589, 2658, 2958, 3842, 4545, 5136
GlaI	GCGC	4 cut(s)	1565, 1805, 4343, 5627
GsaI	CCCAGC	4 cut(s)	1128, 1300, 2738, 4278
GsuI	CTGGAG	4 cut(s)	1104, 2388, 4103, 5002
HapII	CCGG	5 cut(s)	36, 574, 3317, 3506, 5229
HgaI	GACGC	3 cut(s)	2206, 2924, 5056
HhaI	GCGC	4 cut(s)	1566, 1806, 4344, 5628
Hin1I	GRCGYC	1 cut(s)	2935
Hin6I	GCGC	4 cut(s)	1564, 1804, 4342, 5626
HinP1I	GCGC	4 cut(s)	1564, 1804, 4342, 5626
HincII	GTYRAC	4 cut(s)	7, 2748, 3688, 5182
HindII	GTYRAC	4 cut(s)	7, 2748, 3688, 5182
HindIII	AAGCTT	3 cut(s)	458, 4461, 4594
HpaI	GTTAAC	1 cut(s)	3688
HpaII	CCGG	5 cut(s)	36, 574, 3317, 3506, 5229
Hpy166II	GTNNAC	9 cut(s)	7, 317, 877, 2748, 3688, 4385, 4877, 4991, 5182
Hpy8I	GTNNAC	9 cut(s)	7, 317, 877, 2748, 3688, 4385, 4877, 4991, 5182
Hpy99I	CGWCG	3 cut(s)	2200, 2940, 4926
HpyCH4IV	ACGT	7 cut(s)	619, 1187, 1623, 2557, 4199, 4405, 4767
HpySE526I	ACGT	7 cut(s)	619, 1187, 1623, 2557, 4199, 4405, 4767
Hsp92I	GRCGYC	1 cut(s)	2935
HspAI	GCGC	4 cut(s)	1564, 1804, 4342, 5626
Kpn2I	TCCGGA	1 cut(s)	3505
Ksp22I	TGATCA	3 cut(s)	733, 1447, 1636
KspAI	GTTAAC	1 cut(s)	3688
KspI	CCGCGG	1 cut(s)	155
MabI	ACCWGGT	1 cut(s)	2026
MaeI	CTAG	8 cut(s)	498, 669, 2589, 2658, 2958, 3842, 4545, 5136
MaeII	ACGT	7 cut(s)	619, 1187, 1623, 2557, 4199, 4405, 4767
MfeI	CAATTG	3 cut(s)	99, 2361, 4002
MflI	RGATCY	7 cut(s)	422, 1845, 2647, 2809, 3775, 4534, 5637
MhlI	GDGCHC	9 cut(s)	871, 2731, 3065, 3190, 3616, 3674, 4587, 5160, 5390
MlsI	TGGCCA	2 cut(s)	4169, 5576
MluNI	TGGCCA	2 cut(s)	4169, 5576
MlyI	GAGTC	9 cut(s)	1718, 2214, 3236, 3518, 4253, 4273, 5009, 5426, 5576
MmeI	TCCRAC	2 cut(s)	1170, 3793
Mox20I	TGGCCA	2 cut(s)	4169, 5576
Mph1103I	ATGCAT	3 cut(s)	1966, 4513, 4855
MroI	TCCGGA	1 cut(s)	3505
MroXI	GAANNNNTTC	3 cut(s)	2799, 3243, 4446
MscI	TGGCCA	2 cut(s)	4169, 5576
MslI	CAYNNNNRTG	3 cut(s)	351, 1152, 5255
Msp20I	TGGCCA	2 cut(s)	4169, 5576
MspI	CCGG	5 cut(s)	36, 574, 3317, 3506, 5229
MunI	CAATTG	3 cut(s)	99, 2361, 4002
Mva1269I	GAATGC	4 cut(s)	1838, 1964, 4011, 4642
MvaI	CCWGG	7 cut(s)	1398, 2028, 2132, 2291, 3158, 4121, 5020
MvnI	CGCG	1 cut(s)	154
NciI	CCSGG	4 cut(s)	574, 3317, 3318, 5230
NdeI	CATATG	3 cut(s)	3283, 3802, 4849
NheI	GCTAGC	1 cut(s)	2657
NmeAIII	GCCGAG	1 cut(s)	4867
NmuCI	GTSAC	7 cut(s)	105, 430, 579, 1652, 2572, 3757, 4774
NsiI	ATGCAT	3 cut(s)	1966, 4513, 4855
NspI	RCATGY	4 cut(s)	350, 1245, 3686, 4129
PaeR7I	CTCGAG	1 cut(s)	2903
PagI	TCATGA	2 cut(s)	1444, 5541
PceI	AGGCCT	1 cut(s)	841
PciI	ACATGT	2 cut(s)	3682, 4125
PctI	GAATGC	4 cut(s)	1838, 1964, 4011, 4642
PdmI	GAANNNNTTC	3 cut(s)	2799, 3243, 4446
PflMI	CCANNNNNTGG	1 cut(s)	1558
PfoI	TCCNGGA	3 cut(s)	572, 4119, 5018
PleI	GAGTC	9 cut(s)	1717, 2213, 3235, 3518, 4253, 4273, 5009, 5425, 5576
PpsI	GAGTC	9 cut(s)	1717, 2213, 3235, 3518, 4253, 4273, 5009, 5425, 5576
Ppu21I	YACGTR	1 cut(s)	4406
PpuMI	RGGWCCY	2 cut(s)	257, 5372
PscI	ACATGT	2 cut(s)	3682, 4125
PshAI	GACNNNNGTC	1 cut(s)	1281
PsiI	TTATAA	2 cut(s)	2666, 5502
Psp124BI	GAGCTC	3 cut(s)	871, 3190, 5390
Psp1406I	AACGTT	1 cut(s)	4199
Psp5II	RGGWCCY	2 cut(s)	257, 5372
Psp6I	CCWGG	7 cut(s)	1396, 2026, 2130, 2289, 3156, 4119, 5018
PspFI	CCCAGC	4 cut(s)	1124, 1296, 2734, 4274
PspGI	CCWGG	7 cut(s)	1396, 2026, 2130, 2289, 3156, 4119, 5018
PspPPI	RGGWCCY	2 cut(s)	257, 5372
PspXI	VCTCGAGB	1 cut(s)	2903
PstI	CTGCAG	5 cut(s)	1102, 1732, 2809, 4507, 5281
PsuI	RGATCY	7 cut(s)	422, 1845, 2647, 2809, 3775, 4534, 5637
PvuII	CAGCTG	8 cut(s)	1097, 1124, 2734, 4423, 4838, 5219, 5276, 5358
RsaI	GTAC	9 cut(s)	318, 1705, 2431, 3387, 3705, 3735, 4386, 4876, 4934
RsaNI	GTAC	9 cut(s)	317, 1704, 2430, 3386, 3704, 3734, 4385, 4875, 4933
RseI	CAYNNNNRTG	3 cut(s)	351, 1152, 5255
SacI	GAGCTC	3 cut(s)	871, 3190, 5390
SacII	CCGCGG	1 cut(s)	155
SalI	GTCGAC	1 cut(s)	5180
ScaI	AGTACT	1 cut(s)	2431
SchI	GAGTC	9 cut(s)	1718, 2214, 3236, 3518, 4253, 4273, 5009, 5426, 5576
SduI	GDGCHC	9 cut(s)	871, 2731, 3065, 3190, 3616, 3674, 4587, 5160, 5390
SexAI	ACCWGGT	1 cut(s)	2026
SfcI	CTRYAG	8 cut(s)	1047, 1098, 1728, 2232, 2805, 3651, 4503, 5277
Sfr274I	CTCGAG	1 cut(s)	2903
Sfr303I	CCGCGG	1 cut(s)	155
SgrBI	CCGCGG	1 cut(s)	155
SinI	GGWCC	7 cut(s)	257, 333, 956, 1412, 1766, 2522, 5372
SlaI	CTCGAG	1 cut(s)	2903
SmaI	CCCGGG	1 cut(s)	3318
SmiMI	CAYNNNNRTG	3 cut(s)	351, 1152, 5255
SmlI	CTYRAG	7 cut(s)	62, 2209, 2741, 2903, 2927, 3068, 5268
SmoI	CTYRAG	7 cut(s)	62, 2209, 2741, 2903, 2927, 3068, 5268
SpeI	ACTAGT	1 cut(s)	2957
SseBI	AGGCCT	1 cut(s)	841
SspI	AATATT	3 cut(s)	1993, 5074, 5452
SspMI	CTAG	8 cut(s)	498, 669, 2589, 2658, 2958, 3842, 4545, 5136
SstI	GAGCTC	3 cut(s)	871, 3190, 5390
StuI	AGGCCT	1 cut(s)	841
StyI	CCWWGG	4 cut(s)	228, 1068, 3291, 5559
TaiI	ACGT	7 cut(s)	622, 1190, 1626, 2560, 4202, 4408, 4770
TaqII	GACCGA	2 cut(s)	321, 1754
TatI	WGTACW	4 cut(s)	316, 2429, 4384, 4874
TauI	GCSGC	4 cut(s)	154, 171, 1144, 4294
TseFI	GTSAC	7 cut(s)	105, 430, 579, 1652, 2572, 3757, 4774
Tsp45I	GTSAC	7 cut(s)	105, 430, 579, 1652, 2572, 3757, 4774
TspGWI	ACGGA	1 cut(s)	5630
TspMI	CCCGGG	1 cut(s)	3316
Van91I	CCANNNNNTGG	1 cut(s)	1558
VpaK11BI	GGWCC	7 cut(s)	257, 333, 956, 1412, 1766, 2522, 5372
XagI	CCTNNNNNAGG	3 cut(s)	1949, 3938, 4118
XceI	RCATGY	4 cut(s)	350, 1245, 3686, 4129
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1075
XhoI	CTCGAG	1 cut(s)	2903
XmaI	CCCGGG	1 cut(s)	3316
XmiI	GTMKAC	3 cut(s)	876, 4990, 5181
XmnI	GAANNNNTTC	3 cut(s)	2799, 3243, 4446
XspI	CTAG	8 cut(s)	498, 669, 2589, 2658, 2958, 3842, 4545, 5136
ZrmI	AGTACT	1 cut(s)	2431
Zsp2I	ATGCAT	3 cut(s)	1966, 4513, 4855

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.