AT4G21070

Protein BREAST CANCER SUSCEPTIBILITY 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0008716
Physical Location & Seq
Forward (+)
11247991 .. 11252757
4767 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G21070.1

Sequence Viewer

Length: 2826 bp
ATGGCGGACACTAGTCACCTGGAGAGGATGGGAAGAGAACTCAAGTGCCCTATTTGCTTGAGTCTATATAATTCTGCAGTTTCACTTTCGTGTAACCATGTATTTTGCAATGCGTGTATAGTGAAATCTATGAAAATGGATGCTACTTGTCCTGTTTGTAAAATCCCTTACCATCGTAGAGAGATTCGAGGTGCTCCACATATGGATAGCTTGGTGAGCATTTACAAGAACATGGAAGATGCTTCTGGGATTAAATTATTCGTTAGCCAGAATAATCCGTCACCATCAGATAAAGAAAAGCAAGTAAGAGATGCTTCCGTTGAAAAGGCAAGTGATAAGAATCGTCAGGGATCTAGGAAGGGCCGAGCATCCAAGAGGAACGAGTATGGGAAAACCAAGGAAATAGATGTAGATGCACCTGGGCCTATTGTTATGAAACCTTCATCCCAAACCAAGAAGAGGGTGCAGCTGCTCCAGAATCTGTCTGCTGAAAGTTTAACTAAACCTACTGAGTCTGTTGAAACAGCTGAAAAACCCAAGGACTACACTGAAAACACTGTGATTCGTTTGGATGAGCATCCATCTCTGAATAAAGAAGGAAATCTTTCACCCTTCTTTTGGTTGAGAGATGAAGATGATGGGGAGAACTCAAGTCAGCGTACAGAAAGTGATCAACTTTTAGGGACTACACCAGTTAATGTTCCCTCTTTCAGCGATTTGATGGACTCAGATCATGAGAGCCCATCGAAGGAAGACGAGCAACAAAAGCCCAATCCAGGTGACATGTTTGATAGCGAAATGTTTGAATGGACTCAGAGGCCTTGTTCTCCGGAGATTCTACCTAGTCCTGTGAAGGCCAAGGTCCTAGGTAGAGATGAGATTGATCTTACTCAAAAGAAGCTACCTAAAGTTAAAGTTGCATCATCCAAATGTAAAAACCGCAAAGCAGGAAGTGCAAGAAATACAGTTGCTAGACGAAGCATTGGGGTTTCACAAGAGGACAACATGGAATCATCTGCAGCAGCAACCATTAGTGAGCAACAAGATAGTCGTGGGACTTCTGGCACAATTATCAGGAATGATGTGAATACTGATGAAAATGTGAAAGCTAAAAGAGCTACAAGAAGCAAGGCTCAGAGTACACGAGTTCAGTCTGATCTAAATGTATCCAATGAAGCTGATGGGAAGCAGGGGACAAAGAGGAAAAGATCTAGCATTAAATCCTCTCCAGCTCACCCAATCGCAGGACCTAATGAGCTCTCACTTGGAACAGAAATTGTGGGAAAGGGGGATCAGGATCAAGCCCATGGTCCATCTGATACACATCCTGAAAAACGAAGTCCCACCGAGAAACCCTCTCTGAAGAAGAGGGGAAGAAAATCCAATGCAAGCTCCTCTTTAAAAGATCTATCTGGAAAAACACAAAAGAAGACTTCAGAGAAGAAATTGAAACTAGATTCCCATATGATCTCAAGCAAAGCTACACAACCGCATGGAAATGGTATTCTAACTGCTGGGTTGAATCAAGGGGGTGATAAACAAGATTCAAGAAACAATAGGAAATCCACTGTGGGTAAAGACGATCATACCATGCAAGTTATAGAGAAATGCTCAACGATAAACAAGTCTTCATCTGGAGGCAGTGCACATTTGCGACGATGTAATGGATCTTTAACGAAGAAATTCACATGTGCCTTTTGTCAGTGTTCAGAAGACACAGAGGCTTCAGGAGAAATGACTCACTACTACAGAGGTGAACCTGTCTCTGCGGATTTTAATGGTGGGTCTAAGGTCATACATGTTCACAAAAACTGTGCTGAATGGGCTCCAAATGTATACTTCAACGACCTTACCATAGTGAATCTTGATGTGGAGTTGACAAGAAGCCGGAGAATAAGTTGCAGCTGCTGTGGGCTTAAAGGCGCAGCACTTGGTTGTTACAATAAGAGTTGCAAGAATAGTTTTCATGTTACGTGTGCAAAACTCATACCAGAATGCAGATGGGACAATGTAAAATTTGTAATGCTATGCCCTTTGGATGCATCCATTAAGTTGCCCTGTGAAGAGGCTAATTCAAAAGACAGGAAATGCAAGCGTACTCCTAAAGAACCACTGCACTCTCAGCCTAAACAAGTATCTGGAAAAGCTAACATCCGTGAGCTCCATATCAAGCAGTTCCATGGATTTTCCAAGAAATTGGTCTTATCTTGCTCAGGGCTCACAGTTGAAGAGAAGACTGTTATTGCAGAATTTGCGGAACTGTCTGGAGTTACGATCTCAAAAAACTGGGATTCAACTGTTACACATGTTATTGCATCAATCAATGAAAACGGAGCCTGCAAAAGGACCCTCAAATTCATGATGGCAATCTTGGAGGGGAAATGGATACTAACCATTGATTGGATTAAGGCGTGTATGAAAAATACAAAATATGTAAGCGAGGAGCCATATGAGATCACTATGGATGTTCATGGAATACGAGAAGGACCTTATCTTGGAAGACAAAGAGCTTTGAAAAAGAAGCCAAAACTTTTTACTGGACTTAAGTTTTACATCATGGGAGATTTCGAGCTTGCTTACAAAGGATATCTTCAAGATCTGATTGTAGCAGCAGGAGGAACAATCTTGCGTAGGCGGCCTGTTTCTTCTGATGATAATGAAGCTTCAACAATCGTAGTATTTAGTGTTGAGCCTAGCAAGAAGAAAACTCTGACCCAAAGAAGATCTGATGCTGAAGCCTTGGCTAAATCTGCTAGAGCCAGAGCTGCAAGCAGTTCATGGGTTTTGGATTCTATTGCAGGTTGCCAAATTTTAGTCTTGATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000152 GO:0000724 GO:0000725 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006355 GO:0006357 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009628 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010212 GO:0010332 GO:0010468 GO:0010556 GO:0010557 GO:0010564 GO:0010565 GO:0010604 GO:0010605 GO:0010628 GO:0010638 GO:0010639 GO:0016020 GO:0016567 GO:0016740 GO:0019216 GO:0019217 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0031056 GO:0031057 GO:0031058 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031400 GO:0031401 GO:0031436 GO:0032268 GO:0032269 GO:0032270 GO:0032446 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0035065 GO:0035066 GO:0035067 GO:0036211 GO:0042127 GO:0042304 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045717 GO:0045787 GO:0045833 GO:0045893 GO:0045922 GO:0045935 GO:0045944 GO:0046483 GO:0046890 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051055 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051247 GO:0051248 GO:0051252 GO:0051254 GO:0051716 GO:0051726 GO:0060255 GO:0062012 GO:0062014 GO:0065007 GO:0070531 GO:0070647 GO:0071156 GO:0071158 GO:0071214 GO:0071478 GO:0071479 GO:0071480 GO:0071704 GO:0071944 GO:0080090 GO:0090068 GO:0090304 GO:0104004 GO:0140096 GO:1901360 GO:1901564 GO:1901983 GO:1901984 GO:1901985 GO:1902275 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1905268 GO:1905269 GO:1990234 GO:2000112 GO:2000756 GO:2000757 GO:2000758 GO:2001141 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
BRCT BRCT_2 DYW_deaminase PPR zf-C3HC4_2 zf-HC5HC2H zf-RING_2

Protein Analysis

941

Amino Acids

103.92

Weight (kDa)

9.18

Isoelectric Point (pI)

48.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC4_3 PF13920 13 - 58 1.9e-06 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_2 PF13923 15 - 53 5.2e-09 Zinc finger, C3HC4 type (RING finger)
zf-RING_2 PF13639 15 - 54 9.1e-08 Ring finger domain
zf-RING_UBOX PF13445 16 - 51 1.5e-07 RING-type zinc-finger
zf-C3HC4 PF00097 16 - 53 3.1e-07 Zinc finger, C3HC4 type (RING finger)
zf-HC5HC2H_2 PF13832 600 - 662 6.1e-07 PHD-zinc-finger like domain
zf-HC5HC2H PF13771 602 - 661 4.6e-09 PHD-like zinc-binding domain
BRCT PF00533 732 - 806 1.1e-11 BRCA1 C Terminus (BRCT) domain
RTT107_BRCT_5 PF16770 755 - 819 3e-06 Regulator of Ty1 transposition protein 107 BRCT domain
BRCT_2 PF16589 843 - 938 5e-08 BRCT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2789
AccB7I CCANNNNNTGG 1 cut(s) 2400
AccI GTMKAC 1 cut(s) 1836
AccIII TCCGGA 1 cut(s) 829
AciI CCGC 6 cut(s) 5, 940, 1490, 1769, 2255, 2635
AclWI GGATC 4 cut(s) 358, 1299, 1305, 1675
AcsI RAATTY 5 cut(s) 1682, 2015, 2249, 2354, 2808
AcuI CTGAAG 4 cut(s) 1382, 1419, 1710, 2754
AfaI GTAC 3 cut(s) 661, 1141, 2098
AfiI CCNNNNNNNGG 8 cut(s) 459, 618, 748, 776, 1244, 2343, 2400, 2495
AflII CTTAAG 1 cut(s) 2543
AflIII ACRYGT 5 cut(s) 783, 1688, 1798, 1973, 2305
AhlI ACTAGT 1 cut(s) 11
AjnI CCWGG 3 cut(s) 18, 418, 775
AleI CACNNNNGTG 1 cut(s) 88
Alw21I GWGCWC 4 cut(s) 196, 1260, 1648, 2163
Alw26I GTCTC 1 cut(s) 1768
Alw44I GTGCAC 1 cut(s) 1644
AlwI GGATC 4 cut(s) 358, 1299, 1305, 1675
AlwNI CAGNNNCTG 2 cut(s) 481, 1908
Aor13HI TCCGGA 1 cut(s) 829
AoxI GGCC 5 cut(s) 361, 422, 818, 855, 2636
ApaLI GTGCAC 1 cut(s) 1644
ApeKI GCWGC 9 cut(s) 466, 469, 1019, 1022, 1902, 1905, 1925, 2609, 2765
ApoI RAATTY 5 cut(s) 1682, 2015, 2249, 2354, 2808
Asp700I GAANNNNTTC 2 cut(s) 604, 1682
AspA2I CCTAGG 1 cut(s) 865
AspLEI GCGC 1 cut(s) 1925
AspS9I GGNCC 7 cut(s) 361, 422, 862, 1247, 1310, 2346, 2486
AsuHPI GGTGA 8 cut(s) 8, 226, 273, 600, 791, 1226, 1544, 1766
AvaII GGWCC 5 cut(s) 862, 1247, 1310, 2346, 2486
AvrII CCTAGG 1 cut(s) 865
BaeGI GKGCMC 2 cut(s) 50, 1648
BanII GRGCYC 5 cut(s) 743, 1260, 1828, 2163, 2220
BauI CACGAG 1 cut(s) 1143
BbsI GAAGAC 6 cut(s) 759, 1436, 1620, 1719, 2240, 2506
Bbv12I GWGCWC 4 cut(s) 196, 1260, 1648, 2163
BbvI GCAGC 9 cut(s) 456, 478, 1031, 1034, 1892, 1914, 1937, 2621, 2752
BciT130I CCWGG 3 cut(s) 20, 420, 777
BciVI GTATCC 2 cut(s) 1177, 2379
BclI TGATCA 1 cut(s) 670
BcoDI GTCTC 1 cut(s) 1768
BcuI ACTAGT 1 cut(s) 11
BfaI CTAG 9 cut(s) 12, 354, 843, 866, 972, 1212, 1454, 2694, 2754
BfmI CTRYAG 3 cut(s) 75, 1017, 1747
BfrI CTTAAG 1 cut(s) 2543
BfuAI ACCTGC 1 cut(s) 2789
BfuI GTATCC 2 cut(s) 1177, 2379
BglII AGATCT 4 cut(s) 1208, 1405, 2596, 2723
BlnI CCTAGG 1 cut(s) 865
Bme1390I CCNGG 3 cut(s) 20, 420, 777
Bme18I GGWCC 5 cut(s) 862, 1247, 1310, 2346, 2486
BmgT120I GGNCC 7 cut(s) 361, 422, 862, 1247, 1310, 2346, 2486
BmiI GGNNCC 4 cut(s) 1827, 2335, 2348, 2445
BmrFI CCNGG 3 cut(s) 20, 420, 777
BmrI ACTGGG 1 cut(s) 2296
BmuI ACTGGG 1 cut(s) 2296
BoxI GACNNNNGTC 1 cut(s) 12
BpiI GAAGAC 6 cut(s) 759, 1436, 1620, 1719, 2240, 2506
BplI GAGNNNNNCTC 4 cut(s) 1340, 1372, 1595, 1627
BpmI CTGGAG 5 cut(s) 41, 458, 1212, 1656, 2286
Bpu10I CCTNAGC 1 cut(s) 2212
BpuEI CTTGAG 4 cut(s) 26, 79, 634, 1456
BsaAI YACGTR 1 cut(s) 1974
BsaBI GATNNNNATC 5 cut(s) 339, 576, 1296, 1323, 2366
BsaJI CCNNGG 8 cut(s) 396, 419, 537, 858, 865, 1306, 2179, 2739
BsaWI WCCGGW 1 cut(s) 829
BsaXI ACNNNNNCTCC 2 cut(s) 1882, 1912
Bsc4I CCNNNNNNNGG 8 cut(s) 459, 618, 748, 776, 1244, 2343, 2400, 2495
Bse1I ACTGG 3 cut(s) 692, 2291, 2542
Bse3DI GCAATG 1 cut(s) 115
Bse8I GATNNNNATC 5 cut(s) 339, 576, 1296, 1323, 2366
BseAI TCCGGA 1 cut(s) 829
BseBI CCWGG 3 cut(s) 20, 420, 777
BseDI CCNNGG 8 cut(s) 396, 419, 537, 858, 865, 1306, 2179, 2739
BseJI GATNNNNATC 5 cut(s) 339, 576, 1296, 1323, 2366
BseLI CCNNNNNNNGG 8 cut(s) 459, 618, 748, 776, 1244, 2343, 2400, 2495
BseMI GCAATG 1 cut(s) 115
BseMII CTCAG 6 cut(s) 501, 741, 827, 1148, 2135, 2226
BseNI ACTGG 3 cut(s) 692, 2291, 2542
BseRI GAGGAG 2 cut(s) 1384, 2456
BseSI GKGCMC 2 cut(s) 50, 1648
BseXI GCAGC 9 cut(s) 456, 478, 1031, 1034, 1892, 1914, 1937, 2621, 2752
BseYI CCCAGC 1 cut(s) 1514
BsgI GTGCAG 2 cut(s) 485, 2099
BshFI GGCC 5 cut(s) 363, 424, 820, 857, 2638
BsiHKAI GWGCWC 4 cut(s) 196, 1260, 1648, 2163
BsiSI CCGG 2 cut(s) 830, 1888
BslFI GGGAC 5 cut(s) 697, 1069, 1207, 1326, 2018
BslI CCNNNNNNNGG 8 cut(s) 459, 618, 748, 776, 1244, 2343, 2400, 2495
BsmAI GTCTC 1 cut(s) 1768
BsmFI GGGAC 5 cut(s) 697, 1069, 1207, 1326, 2018
BsmI GAATGC 1 cut(s) 2000
BsnI GGCC 5 cut(s) 363, 424, 820, 857, 2638
Bsp1286I GDGCHC 8 cut(s) 50, 196, 743, 1260, 1648, 1828, 2163, 2220
Bsp13I TCCGGA 1 cut(s) 829
Bsp19I CCATGG 2 cut(s) 1306, 2179
BspACI CCGC 6 cut(s) 5, 940, 1490, 1769, 2255, 2635
BspANI GGCC 5 cut(s) 363, 424, 820, 857, 2638
BspCNI CTCAG 6 cut(s) 502, 740, 826, 1147, 2134, 2225
BspEI TCCGGA 1 cut(s) 829
BspHI TCATGA 2 cut(s) 733, 2358
BspLI GGNNCC 4 cut(s) 1827, 2335, 2348, 2445
BspMAI CTGCAG 2 cut(s) 79, 1021
BspMI ACCTGC 1 cut(s) 2789
BspPI GGATC 4 cut(s) 358, 1299, 1305, 1675
BspTI CTTAAG 1 cut(s) 2543
BsrDI GCAATG 1 cut(s) 115
BsrI ACTGG 3 cut(s) 692, 2291, 2542
BssECI CCNNGG 8 cut(s) 396, 419, 537, 858, 865, 1306, 2179, 2739
BssNAI GTATAC 1 cut(s) 1837
BssSI CACGAG 1 cut(s) 1143
BssT1I CCWWGG 7 cut(s) 396, 537, 858, 865, 1306, 2179, 2739
Bst1107I GTATAC 1 cut(s) 1837
Bst2BI CACGAG 1 cut(s) 1143
Bst2UI CCWGG 3 cut(s) 20, 420, 777
Bst4CI ACNGT 8 cut(s) 559, 967, 1570, 1814, 2224, 2239, 2262, 2299
Bst6I CTCTTC 5 cut(s) 28, 452, 1361, 2058, 2223
BstAFI CTTAAG 1 cut(s) 2543
BstAPI GCANNNNNTGC 2 cut(s) 953, 2252
BstBAI YACGTR 1 cut(s) 1974
BstC8I GCNNGC 5 cut(s) 1390, 2093, 2338, 2574, 2770
BstDEI CTNAG 7 cut(s) 510, 727, 813, 1134, 1788, 2121, 2212
BstDSI CCRYGG 2 cut(s) 1306, 2179
BstENI CCTNNNNNAGG 1 cut(s) 2341
BstHHI GCGC 1 cut(s) 1925
BstMAI GTCTC 1 cut(s) 1768
BstNI CCWGG 3 cut(s) 20, 420, 777
BstNSI RCATGY 4 cut(s) 787, 1692, 1802, 2309
BstPAI GACNNNNGTC 1 cut(s) 12
BstSCI CCNGG 3 cut(s) 18, 418, 775
BstSFI CTRYAG 3 cut(s) 75, 1017, 1747
BstSLI GKGCMC 2 cut(s) 50, 1648
BstV1I GCAGC 9 cut(s) 456, 478, 1031, 1034, 1892, 1914, 1937, 2621, 2752
BstV2I GAAGAC 6 cut(s) 759, 1436, 1620, 1719, 2240, 2506
BstX2I RGATCY 6 cut(s) 350, 1208, 1405, 1667, 2596, 2723
BstXI CCANNNNNNTGG 1 cut(s) 2197
BstYI RGATCY 6 cut(s) 350, 1208, 1405, 1667, 2596, 2723
BstZ17I GTATAC 1 cut(s) 1837
BsuI GTATCC 2 cut(s) 1177, 2379
BsuRI GGCC 5 cut(s) 363, 424, 820, 857, 2638
BtgI CCRYGG 2 cut(s) 1306, 2179
BtsI GCAGTG 2 cut(s) 1648, 2111
BtsIMutI CAGTG 6 cut(s) 546, 555, 1566, 1648, 1709, 2111
BveI ACCTGC 1 cut(s) 2789
Cac8I GCNNGC 5 cut(s) 1390, 2093, 2338, 2574, 2770
CaiI CAGNNNCTG 2 cut(s) 481, 1908
CciI TCATGA 2 cut(s) 733, 2358
CfoI GCGC 1 cut(s) 1925
Cfr13I GGNCC 7 cut(s) 361, 422, 862, 1247, 1310, 2346, 2486
Csp6I GTAC 3 cut(s) 660, 1140, 2097
CviQI GTAC 3 cut(s) 660, 1140, 2097
DdeI CTNAG 7 cut(s) 510, 727, 813, 1134, 1788, 2121, 2212
DraI TTTAAA 1 cut(s) 1401
Eam1104I CTCTTC 5 cut(s) 28, 452, 1361, 2058, 2223
EarI CTCTTC 5 cut(s) 28, 452, 1361, 2058, 2223
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 2 cut(s) 1258, 2161
Eco130I CCWWGG 7 cut(s) 396, 537, 858, 865, 1306, 2179, 2739
Eco147I AGGCCT 1 cut(s) 820
Eco24I GRGCYC 5 cut(s) 743, 1260, 1828, 2163, 2220
Eco32I GATATC 1 cut(s) 2588
Eco47I GGWCC 5 cut(s) 862, 1247, 1310, 2346, 2486
Eco53kI GAGCTC 2 cut(s) 1258, 2161
Eco57I CTGAAG 4 cut(s) 1382, 1419, 1710, 2754
EcoICRI GAGCTC 2 cut(s) 1258, 2161
EcoNI CCTNNNNNAGG 1 cut(s) 2341
EcoO109I RGGNCCY 4 cut(s) 862, 1247, 2346, 2486
EcoRII CCWGG 3 cut(s) 18, 418, 775
EcoRV GATATC 1 cut(s) 2588
EcoT14I CCWWGG 7 cut(s) 396, 537, 858, 865, 1306, 2179, 2739
EcoT22I ATGCAT 1 cut(s) 2044
EcoT38I GRGCYC 5 cut(s) 743, 1260, 1828, 2163, 2220
ErhI CCWWGG 7 cut(s) 396, 537, 858, 865, 1306, 2179, 2739
FalI AAGNNNNNCTT 8 cut(s) 298, 330, 588, 620, 1381, 1413, 2574, 2606
FaqI GGGAC 5 cut(s) 697, 1069, 1207, 1326, 2018
FauNDI CATATG 3 cut(s) 201, 1464, 2449
FbaI TGATCA 1 cut(s) 670
FblI GTMKAC 1 cut(s) 1836
FriOI GRGCYC 5 cut(s) 743, 1260, 1828, 2163, 2220
FspBI CTAG 9 cut(s) 12, 354, 843, 866, 972, 1212, 1454, 2694, 2754
GlaI GCGC 1 cut(s) 1924
GsaI CCCAGC 1 cut(s) 1518
GsuI CTGGAG 5 cut(s) 41, 458, 1212, 1656, 2286
HaeIII GGCC 5 cut(s) 363, 424, 820, 857, 2638
HapII CCGG 2 cut(s) 830, 1888
HhaI GCGC 1 cut(s) 1925
Hin6I GCGC 1 cut(s) 1923
HinP1I GCGC 1 cut(s) 1923
HincII GTYRAC 1 cut(s) 1878
HindII GTYRAC 1 cut(s) 1878
HindIII AAGCTT 1 cut(s) 2661
HpaII CCGG 2 cut(s) 830, 1888
HphI GGTGA 8 cut(s) 8, 226, 273, 600, 791, 1226, 1544, 1766
Hpy166II GTNNAC 6 cut(s) 1142, 1646, 1757, 1804, 1837, 1878
Hpy8I GTNNAC 6 cut(s) 1142, 1646, 1757, 1804, 1837, 1878
Hpy99I CGWCG 1 cut(s) 1659
HpyAV CCTTC 7 cut(s) 352, 450, 590, 622, 742, 847, 2477
HpyCH4III ACNGT 8 cut(s) 559, 967, 1570, 1814, 2224, 2239, 2262, 2299
HpyCH4IV ACGT 1 cut(s) 1973
HpyF3I CTNAG 7 cut(s) 510, 727, 813, 1134, 1788, 2121, 2212
HpySE526I ACGT 1 cut(s) 1973
HspAI GCGC 1 cut(s) 1923
Kpn2I TCCGGA 1 cut(s) 829
Ksp22I TGATCA 1 cut(s) 670
LmnI GCTCC 7 cut(s) 199, 477, 1397, 1831, 2166, 2333, 2443
Lsp1109I GCAGC 9 cut(s) 456, 478, 1031, 1034, 1892, 1914, 1937, 2621, 2752
MaeI CTAG 9 cut(s) 12, 354, 843, 866, 972, 1212, 1454, 2694, 2754
MaeII ACGT 1 cut(s) 1973
MaeIII GTNAC 8 cut(s) 14, 92, 279, 779, 1937, 1969, 2269, 2299
MflI RGATCY 6 cut(s) 350, 1208, 1405, 1667, 2596, 2723
MhlI GDGCHC 8 cut(s) 50, 196, 743, 1260, 1648, 1828, 2163, 2220
MlyI GAGTC 5 cut(s) 70, 521, 719, 805, 1732
Mph1103I ATGCAT 1 cut(s) 2044
MroI TCCGGA 1 cut(s) 829
MroXI GAANNNNTTC 2 cut(s) 604, 1682
MslI CAYNNNNRTG 3 cut(s) 88, 928, 1497
MspA1I CMGCKG 3 cut(s) 469, 527, 1905
MspCI CTTAAG 1 cut(s) 2543
MspI CCGG 2 cut(s) 830, 1888
MspR9I CCNGG 3 cut(s) 20, 420, 777
Mva1269I GAATGC 1 cut(s) 2000
MvaI CCWGG 3 cut(s) 20, 420, 777
NcoI CCATGG 2 cut(s) 1306, 2179
NdeI CATATG 3 cut(s) 201, 1464, 2449
NlaIV GGNNCC 4 cut(s) 1827, 2335, 2348, 2445
NmeAIII GCCGAG 1 cut(s) 389
NmuCI GTSAC 3 cut(s) 14, 279, 779
NsiI ATGCAT 1 cut(s) 2044
NspI RCATGY 4 cut(s) 787, 1692, 1802, 2309
OliI CACNNNNGTG 1 cut(s) 88
PagI TCATGA 2 cut(s) 733, 2358
PceI AGGCCT 1 cut(s) 820
PciI ACATGT 4 cut(s) 783, 1688, 1798, 2305
PctI GAATGC 1 cut(s) 2000
PdmI GAANNNNTTC 2 cut(s) 604, 1682
PflMI CCANNNNNTGG 1 cut(s) 2400
PleI GAGTC 5 cut(s) 69, 520, 719, 805, 1732
PpsI GAGTC 5 cut(s) 69, 520, 719, 805, 1732
Ppu21I YACGTR 1 cut(s) 1974
PpuMI RGGWCCY 4 cut(s) 862, 1247, 2346, 2486
PscI ACATGT 4 cut(s) 783, 1688, 1798, 2305
PshAI GACNNNNGTC 1 cut(s) 12
Psp124BI GAGCTC 2 cut(s) 1260, 2163
Psp5II RGGWCCY 4 cut(s) 862, 1247, 2346, 2486
Psp6I CCWGG 3 cut(s) 18, 418, 775
PspFI CCCAGC 1 cut(s) 1514
PspGI CCWGG 3 cut(s) 18, 418, 775
PspN4I GGNNCC 4 cut(s) 1827, 2335, 2348, 2445
PspPI GGNCC 7 cut(s) 361, 422, 862, 1247, 1310, 2346, 2486
PspPPI RGGWCCY 4 cut(s) 862, 1247, 2346, 2486
PstI CTGCAG 2 cut(s) 79, 1021
PstNI CAGNNNCTG 2 cut(s) 481, 1908
PsuI RGATCY 6 cut(s) 350, 1208, 1405, 1667, 2596, 2723
PvuII CAGCTG 3 cut(s) 469, 527, 1905
RsaI GTAC 3 cut(s) 661, 1141, 2098
RsaNI GTAC 3 cut(s) 660, 1140, 2097
RseI CAYNNNNRTG 3 cut(s) 88, 928, 1497
SacI GAGCTC 2 cut(s) 1260, 2163
Sau96I GGNCC 7 cut(s) 361, 422, 862, 1247, 1310, 2346, 2486
SchI GAGTC 5 cut(s) 70, 521, 719, 805, 1732
ScrFI CCNGG 3 cut(s) 20, 420, 777
SduI GDGCHC 8 cut(s) 50, 196, 743, 1260, 1648, 1828, 2163, 2220
SfcI CTRYAG 3 cut(s) 75, 1017, 1747
SinI GGWCC 5 cut(s) 862, 1247, 1310, 2346, 2486
SmiMI CAYNNNNRTG 3 cut(s) 88, 928, 1497
SmlI CTYRAG 5 cut(s) 41, 58, 649, 1471, 2543
SmoI CTYRAG 5 cut(s) 41, 58, 649, 1471, 2543
SpeI ACTAGT 1 cut(s) 11
SseBI AGGCCT 1 cut(s) 820
SsiI CCGC 6 cut(s) 5, 940, 1490, 1769, 2255, 2635
SspMI CTAG 9 cut(s) 12, 354, 843, 866, 972, 1212, 1454, 2694, 2754
SstI GAGCTC 2 cut(s) 1260, 2163
StuI AGGCCT 1 cut(s) 820
StyD4I CCNGG 3 cut(s) 18, 418, 775
StyI CCWWGG 7 cut(s) 396, 537, 858, 865, 1306, 2179, 2739
TaaI ACNGT 8 cut(s) 559, 967, 1570, 1814, 2224, 2239, 2262, 2299
TaiI ACGT 1 cut(s) 1976
TaqI TCGA 3 cut(s) 187, 746, 2568
TatI WGTACW 1 cut(s) 1139
TauI GCSGC 1 cut(s) 2638
TscAI CASTG 6 cut(s) 553, 562, 1573, 1648, 1709, 2118
TseFI GTSAC 3 cut(s) 14, 279, 779
TseI GCWGC 9 cut(s) 466, 469, 1019, 1022, 1902, 1905, 1925, 2609, 2765
Tsp45I GTSAC 3 cut(s) 14, 279, 779
TspGWI ACGGA 4 cut(s) 267, 307, 2144, 2346
TspRI CASTG 6 cut(s) 553, 562, 1573, 1648, 1709, 2118
Van91I CCANNNNNTGG 1 cut(s) 2400
Vha464I CTTAAG 1 cut(s) 2543
VneI GTGCAC 1 cut(s) 1644
VpaK11BI GGWCC 5 cut(s) 862, 1247, 1310, 2346, 2486
XagI CCTNNNNNAGG 1 cut(s) 2341
XapI RAATTY 5 cut(s) 1682, 2015, 2249, 2354, 2808
XceI RCATGY 4 cut(s) 787, 1692, 1802, 2309
XcmI CCANNNNNNNNNTGG 1 cut(s) 1998
XmaJI CCTAGG 1 cut(s) 865
XmiI GTMKAC 1 cut(s) 1836
XmnI GAANNNNTTC 2 cut(s) 604, 1682
XspI CTAG 9 cut(s) 12, 354, 843, 866, 972, 1212, 1454, 2694, 2754
Zsp2I ATGCAT 1 cut(s) 2044
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.