Prupe.4G087500_v2.0.a1

Protein BREAST CANCER SUSCEPTIBILITY 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0008716
Physical Location & Seq
Forward (+)
4294304 .. 4300042
5739 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G087500.2

Sequence Viewer

Length: 3075 bp
ATGGAGACTCCGGCCCACCTCGAGAAAATGGGCAGAGAGCTCAAGTGCCCCATTTGTTTGAGTCTGCTGAATTCTGCGGTTTCACTTAATTGCAATCATGTCTTCTGCAACTCTTGTATTGTGAAATCAATGAAATCGGGTTCCAATTGTCCCGTTTGTAAAATTCCATATCGGCGCAGAGAGATTCGTCCTGCTCCACACATGGATAATTTGGTTAGTATTTACAAAAGCATGGAGGTTGCTTCAGGAATTAATATATTTGTCACTCAGAATGCACCCTCAACTAAATCATCAGACGGAAAACTGCAAGCCCAAGATGATGGTCATGATGAGCAAGATATCCCTAAACATTGTCAGGATAGAGATGAGAAACAGAAATCCTTAAGAGGAAAAGGATCAAGGAAAACTAAATCCAACCTGAAAAATTCGGGTTCTCTTTCAGTTAAACCTTCATTTCCAACCAAGAAAAGGGTTCAGGTTCCACAGTGTCCTCTTTCAGAAACTCCTACACGCCCTGAAAAGACAGTTGGTAAACTAATGGATGAAAGGTCTAAGCACAGTTCAACAACTTTAAAGGGGAGGCCAGTTCTAAATGAAGTGGGAGAACCGATGCTTTCACCTTTCTTTTGGTTGAGAGACAAGGATGAAGAAAATTTGAGTCAGCATACTGATGGTGATCAACTCACTGATAGTCCTCCAAATGTTCCTACTTTCAGTGATATCAAAGACTCAGAAGATGAATACTCTGCTAGATTGACCCCACCGGGCGAAGTGCATGGAAAATCTTCAAATGTTGCAGATTTATTTGATAGTGAGATGTTTGAATGGACACAAAGAGAATGCTCCCCTGAGCTCTTCCAAAGTCCTTCTAAGATGCAGGTTCCCGACAGCGATGATATTGATAGAGTTCAAGAGAAGGAACTGAAAGAAATCTCACAAAACAAGAAATTAGATGCACATTCTGCTAAAAATGCAAGGTCTAGAAATTCTAGACAAAGTAGTGGAAATATGTATTTTCTGCCAGATATTCCCCCTGCTGGAGCAAAAGACAATAGTCAAGTTGTTAGTAATGAATTGAACAAGCAAGGTAGGCAGACAAGGAATATAAGTAAAAGAAAGTGCGCTACAAGTCATACGGATCCAGGTGCTGATGTTAGTGTTAATGTTAATTCAAAAGGATCTAAAGTATTTTATGAAGAACCAGTATGTAAGAATAATTCTAGTTCTTTGGCCAAGATTTCCAAAAGGAGTAAGAAGGAACATCCATCTGTGGTTGCAATGAAGCCAACATCTGAAAATGTTCATGTCCTCTCAACAGAAGCTGAAACTCAAAATAATGGTGATGACAAGGGCATAACTGAATCACCAACTTCATTAGGAAAGAGTGAAGGTGGTAGTGCACCACCCAGTAAGAAGGCTGGAAAAATCTGTAACGAGGTAAATGCCAAGAGCCAGATGCACTGCCCAGTAAGGTCAAGAAAGCAAAAGATGGTCTCTATGCCAAACAAAATGCTTGAGGAGGTATCAGAAGTACAGAAGCAGGCAAATAAGGATACTACAACTGATTTGTCTCTTATAAATCTCTCTACAGTTGATAACAAGAAAGCCTCTGAGTTTGGGAACAAATCCAGAAAACTTCAGAGGGGAGCCAAGTTATGTGATCGAGAATTGAAGAATAAAAAGGCGACAGTTTCCTCTGATGGCAACTCAAAGGATGATACTTTTGTTAGGGTTGGAGAGGGTCATGGGAATGTTAATGAAAATGGAAATCAACCCACTGAAAAGATCGAAGGCAATTGTGATGTCCCAACTGATCGATCACCAGTGCAGAAGCTTCCTTCATTGACAAACAATTTGGTCTTGCAGAGATGTGAGGCCATTCCTAGTAAAATCCAATGTGCTTTCTGTCTTTCATCAGAAGAATCAGAGGCGTCTGGAGAGATAGTCCACTATTATAATGGCAAGCCTGTTGCTGTGGATCACAATGGAGGACTCAAGGTTATTCATGCACACAGGATCTGCACTGAATGGGCTCCCAATGTCTATTTTGAAGATGAAACTGCTGTTAATCTTGAAGCTGAGTTAACTAGGAGTCGTAGAATTAAATGTTCTTGCTGTGAAATTAAAGGTGCAGCTCTTGGGTGTTATGAGAGGAGTTGTCGTAAGAGCTTTCATGTCACCTGTGCAAAGTTGATGCCTGAGTGTCGATGGGATATTGATAATTTTGTTATGTTATGCCCCCTTCACGCCTCTTCTAAATTGCCAAATGAAAGCTCTGAATCTCAAGCAAGGAGGAGGAAGAGCAATCCTAGAAAACAATCTAATGCTGAACATTATAAAGCTGCTGTTAAACAAGACAACACCATGCCTCCAGATCGGAAATTTTGTGGATCATCCAAGAAATTAGTTCTCTGTTGTTCATCTCTCACAAATGCAGAGAGGGAATCTGTTTCTGGATTTGAAAGATTATCTGGATTTACAGTTTTAAAGAATTGGGATTCTAGTGTCACCCATGTTATTGCGTCAGTAGATGAAAATGGAGCATGCAGAAGGACCCTCAAAGTTTTGATGGGTATCTTGGAGGGGAGGTGGATCCTGAGTATGGAATGGATTAATGCTTGCATAGAAGCCATGAAACTAGTTAATGAGGAGCCTTATGAAATTAACGTCGACATTTATGGAATCAGGGATGGTCCTCGACTTGGTAGACTAAGACTTCAGAACAAGCAACCAAAGCTTTTTGATGGGTTCAAGTTTTACTTTATGGGAGACTTTGTACCGTCATATAAGGGTTATCTACAAGACCTAGTAATAGCTGCTGGAGGAACTATTCTGCATAGAAAGCCTGTTCCAGAGGGCCAGAAAGCCTTTTCAGCCAGTTCCCCAAAATGTCAAACCTTCATAATTTACAGCCTTGAGCAACCCGAGCAGGGTCATCCTAGCAAGGGTACGATATTGGACCGCAGGCAGTCTGATGCAAAGGCTTTGGCCAGTTCTGCGGGAGCCATGGCAGCAAGCAATTCATGGATTTTGAACTCCATTGCTGCCTGCAAGTTACAAAGTTTTTCTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000152 GO:0000724 GO:0000725 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006355 GO:0006357 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009628 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010212 GO:0010332 GO:0010468 GO:0010556 GO:0010557 GO:0010564 GO:0010565 GO:0010604 GO:0010605 GO:0010628 GO:0010638 GO:0010639 GO:0016020 GO:0016567 GO:0016740 GO:0019216 GO:0019217 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0031056 GO:0031057 GO:0031058 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031400 GO:0031401 GO:0031436 GO:0032268 GO:0032269 GO:0032270 GO:0032446 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0035065 GO:0035066 GO:0035067 GO:0036211 GO:0042127 GO:0042304 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045717 GO:0045787 GO:0045833 GO:0045893 GO:0045922 GO:0045935 GO:0045944 GO:0046483 GO:0046890 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051055 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051247 GO:0051248 GO:0051252 GO:0051254 GO:0051716 GO:0051726 GO:0060255 GO:0062012 GO:0062014 GO:0065007 GO:0070531 GO:0070647 GO:0071156 GO:0071158 GO:0071214 GO:0071478 GO:0071479 GO:0071480 GO:0071704 GO:0071944 GO:0080090 GO:0090068 GO:0090304 GO:0104004 GO:0140096 GO:1901360 GO:1901564 GO:1901983 GO:1901984 GO:1901985 GO:1902275 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1905268 GO:1905269 GO:1990234 GO:2000112 GO:2000756 GO:2000757 GO:2000758 GO:2001141 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
BRCT BRCT_2 DYW_deaminase PPR zf-C3HC4_2 zf-HC5HC2H zf-RING_2

Protein Analysis

1025

Amino Acids

113.48

Weight (kDa)

8.8

Isoelectric Point (pI)

55.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1577, 1956, 2337
Acc36I ACCTGC 1 cut(s) 868
AccI GTMKAC 2 cut(s) 2670, 2707
AciI CCGC 3 cut(s) 77, 2962, 2999
AclWI GGATC 9 cut(s) 403, 1133, 1146, 1186, 1986, 2024, 2398, 2587, 2600
AcoI YGGCCR 2 cut(s) 1230, 2988
AcsI RAATTY 6 cut(s) 70, 162, 424, 652, 985, 2381
AcuI CTGAAG 3 cut(s) 228, 1622, 2702
AcyI GRCGYC 1 cut(s) 1931
AfaI GTAC 3 cut(s) 1533, 2778, 2950
AfiI CCNNNNNNNGG 6 cut(s) 468, 1037, 2602, 2702, 2930, 2945
AflII CTTAAG 1 cut(s) 382
AhlI ACTAGT 1 cut(s) 2638
AjnI CCWGG 1 cut(s) 1141
AjuI GAANNNNNNNTTGG 2 cut(s) 510, 542
Alw21I GWGCWC 3 cut(s) 42, 855, 1402
Alw26I GTCTC 4 cut(s) 630, 1498, 1575, 2763
Alw44I GTGCAC 1 cut(s) 1398
AlwI GGATC 9 cut(s) 403, 1133, 1146, 1186, 1986, 2024, 2398, 2587, 2600
AlwNI CAGNNNCTG 3 cut(s) 1148, 1322, 2019
Ama87I CYCGRG 2 cut(s) 20, 2924
AoxI GGCC 6 cut(s) 12, 581, 1230, 1875, 2857, 2988
ApaLI GTGCAC 1 cut(s) 1398
ApeKI GCWGC 5 cut(s) 2132, 2342, 2816, 3011, 3044
ApoI RAATTY 6 cut(s) 70, 162, 424, 652, 985, 2381
ArsI GACNNNNNNTTYG 2 cut(s) 1837, 1869
AseI ATTAAT 2 cut(s) 252, 2613
Asp700I GAANNNNTTC 2 cut(s) 784, 1299
AspLEI GCGC 2 cut(s) 177, 1124
AspS9I GGNCC 5 cut(s) 13, 2553, 2693, 2857, 2959
AsuC2I CCSGG 1 cut(s) 765
AsuHPI GGTGA 7 cut(s) 609, 686, 1352, 1356, 1812, 2170, 2500
AvaI CYCGRG 2 cut(s) 20, 2924
AvaII GGWCC 3 cut(s) 2553, 2693, 2959
BaeGI GKGCMC 2 cut(s) 50, 1402
BaeI ACNNNNGTAYC 2 cut(s) 1710, 1743
BalI TGGCCA 2 cut(s) 1232, 2990
BamHI GGATCC 2 cut(s) 1138, 2592
BanII GRGCYC 3 cut(s) 42, 855, 2035
BbsI GAAGAC 1 cut(s) 94
Bbv12I GWGCWC 3 cut(s) 42, 855, 1402
BbvI GCAGC 5 cut(s) 2144, 2329, 2803, 3023, 3031
BccI CCATC 9 cut(s) 314, 665, 1273, 1483, 1694, 2202, 2563, 2684, 2738
BcgI CGANNNNNNTGC 2 cut(s) 1424, 1458
BciT130I CCWGG 1 cut(s) 1143
BciVI GTATCC 1 cut(s) 1546
BclI TGATCA 1 cut(s) 676
BcnI CCSGG 1 cut(s) 765
BcoDI GTCTC 4 cut(s) 630, 1498, 1575, 2763
BcuI ACTAGT 1 cut(s) 2638
BfmI CTRYAG 1 cut(s) 1587
BfrI CTTAAG 1 cut(s) 382
BfuAI ACCTGC 1 cut(s) 868
BfuI GTATCC 1 cut(s) 1546
BisI GCNGC 5 cut(s) 2133, 2343, 2817, 3012, 3045
BlsI GCNGC 5 cut(s) 2134, 2344, 2818, 3013, 3046
Bme1390I CCNGG 2 cut(s) 765, 1143
Bme18I GGWCC 3 cut(s) 2553, 2693, 2959
BmeT110I CYCGRG 2 cut(s) 20, 2924
BmgT120I GGNCC 5 cut(s) 13, 2553, 2693, 2857, 2959
BmrFI CCNGG 2 cut(s) 765, 1143
BmrI ACTGGG 2 cut(s) 1401, 1460
BmsI GCATC 6 cut(s) 600, 864, 943, 1446, 2184, 2965
BmuI ACTGGG 2 cut(s) 1401, 1460
BoxI GACNNNNGTC 1 cut(s) 1053
BpiI GAAGAC 1 cut(s) 94
BpmI CTGGAG 4 cut(s) 1059, 1956, 2355, 2841
Bpu10I CCTNAGC 1 cut(s) 849
BpuEI CTTGAG 5 cut(s) 26, 1535, 1979, 2268, 2936
BpuMI CCSGG 1 cut(s) 765
Bsa29I ATCGAT 1 cut(s) 1816
BsaBI GATNNNNATC 2 cut(s) 675, 2573
BsaHI GRCGYC 1 cut(s) 1931
BsaI GGTCTC 1 cut(s) 1498
BsaJI CCNNGG 1 cut(s) 3006
Bsc4I CCNNNNNNNGG 6 cut(s) 468, 1037, 2602, 2702, 2930, 2945
Bse1I ACTGG 7 cut(s) 584, 1202, 1407, 1466, 1823, 2877, 2991
Bse3DI GCAATG 2 cut(s) 1284, 3039
Bse8I GATNNNNATC 2 cut(s) 675, 2573
BseBI CCWGG 1 cut(s) 1143
BseCI ATCGAT 1 cut(s) 1816
BseDI CCNNGG 1 cut(s) 3006
BseGI GGATG 7 cut(s) 547, 649, 1261, 1720, 2393, 2695, 2935
BseJI GATNNNNATC 2 cut(s) 675, 2573
BseLI CCNNNNNNNGG 6 cut(s) 468, 1037, 2602, 2702, 2930, 2945
BseMI GCAATG 2 cut(s) 1284, 3039
BseMII CTCAG 7 cut(s) 281, 744, 840, 1602, 2070, 2190, 2588
BseNI ACTGG 7 cut(s) 584, 1202, 1407, 1466, 1823, 2877, 2991
BseRI GAGGAG 4 cut(s) 1532, 2167, 2308, 2663
BseSI GKGCMC 2 cut(s) 50, 1402
BseXI GCAGC 5 cut(s) 2144, 2329, 2803, 3023, 3031
BsgI GTGCAG 3 cut(s) 1847, 2005, 2151
BshFI GGCC 6 cut(s) 14, 583, 1232, 1877, 2859, 2990
BshVI ATCGAT 1 cut(s) 1816
BsiHKAI GWGCWC 3 cut(s) 42, 855, 1402
BsiHKCI CYCGRG 2 cut(s) 20, 2924
BsiSI CCGG 2 cut(s) 11, 764
BslFI GGGAC 2 cut(s) 135, 1790
BslI CCNNNNNNNGG 6 cut(s) 468, 1037, 2602, 2702, 2930, 2945
BsmAI GTCTC 4 cut(s) 630, 1498, 1575, 2763
BsmFI GGGAC 2 cut(s) 135, 1790
BsmI GAATGC 2 cut(s) 277, 845
BsnI GGCC 6 cut(s) 14, 583, 1232, 1877, 2859, 2990
Bso31I GGTCTC 1 cut(s) 1498
BsoBI CYCGRG 2 cut(s) 20, 2924
Bsp1286I GDGCHC 5 cut(s) 42, 50, 855, 1402, 2035
Bsp19I CCATGG 1 cut(s) 3006
BspACI CCGC 3 cut(s) 77, 2962, 2999
BspANI GGCC 6 cut(s) 14, 583, 1232, 1877, 2859, 2990
BspCNI CTCAG 7 cut(s) 280, 743, 841, 1603, 2071, 2191, 2589
BspDI ATCGAT 1 cut(s) 1816
BspHI TCATGA 1 cut(s) 325
BspMI ACCTGC 1 cut(s) 868
BspPI GGATC 9 cut(s) 403, 1133, 1146, 1186, 1986, 2024, 2398, 2587, 2600
BspQI GCTCTTC 2 cut(s) 860, 2294
BspTI CTTAAG 1 cut(s) 382
BspTNI GGTCTC 1 cut(s) 1498
BsrDI GCAATG 2 cut(s) 1284, 3039
BsrI ACTGG 7 cut(s) 584, 1202, 1407, 1466, 1823, 2877, 2991
BssECI CCNNGG 1 cut(s) 3006
BssNI GRCGYC 1 cut(s) 1931
BssT1I CCWWGG 1 cut(s) 3006
Bst2UI CCWGG 1 cut(s) 1143
Bst4CI ACNGT 7 cut(s) 486, 526, 560, 1591, 1690, 2482, 2781
Bst6I CTCTTC 3 cut(s) 860, 2257, 2294
BstACI GRCGYC 1 cut(s) 1931
BstAFI CTTAAG 1 cut(s) 382
BstAPI GCANNNNNTGC 1 cut(s) 962
BstC8I GCNNGC 8 cut(s) 309, 1542, 1964, 2545, 2620, 2966, 3016, 3049
BstDSI CCRYGG 1 cut(s) 3006
BstF5I GGATG 7 cut(s) 547, 649, 1261, 1720, 2393, 2695, 2935
BstHHI GCGC 2 cut(s) 177, 1124
BstMAI GTCTC 4 cut(s) 630, 1498, 1575, 2763
BstMWI GCNNNNNNNGC 9 cut(s) 962, 971, 1090, 2734, 2842, 2873, 2926, 2996, 3011
BstNI CCWGG 1 cut(s) 1143
BstNSI RCATGY 1 cut(s) 2547
BstPAI GACNNNNGTC 1 cut(s) 1053
BstSCI CCNGG 2 cut(s) 763, 1141
BstSFI CTRYAG 1 cut(s) 1587
BstSLI GKGCMC 2 cut(s) 50, 1402
BstV1I GCAGC 5 cut(s) 2144, 2329, 2803, 3023, 3031
BstV2I GAAGAC 1 cut(s) 94
BstX2I RGATCY 4 cut(s) 1138, 1178, 2016, 2592
BstXI CCANNNNNNTGG 1 cut(s) 320
BstYI RGATCY 4 cut(s) 1138, 1178, 2016, 2592
Bsu15I ATCGAT 1 cut(s) 1816
BsuI GTATCC 1 cut(s) 1546
BsuRI GGCC 6 cut(s) 14, 583, 1232, 1877, 2859, 2990
BsuTUI ATCGAT 1 cut(s) 1816
BtgI CCRYGG 1 cut(s) 3006
BtgZI GCGATG 1 cut(s) 906
BtsCI GGATG 7 cut(s) 547, 649, 1261, 1720, 2393, 2695, 2935
BtsI GCAGTG 1 cut(s) 1459
BtsIMutI CAGTG 7 cut(s) 491, 684, 721, 1459, 1776, 1830, 2022
BveI ACCTGC 1 cut(s) 868
Cac8I GCNNGC 8 cut(s) 309, 1542, 1964, 2545, 2620, 2966, 3016, 3049
CaiI CAGNNNCTG 3 cut(s) 1148, 1322, 2019
CciI TCATGA 1 cut(s) 325
CfoI GCGC 2 cut(s) 177, 1124
Cfr13I GGNCC 5 cut(s) 13, 2553, 2693, 2857, 2959
ClaI ATCGAT 1 cut(s) 1816
CseI GACGC 2 cut(s) 1920, 2511
Csp6I GTAC 3 cut(s) 1532, 2777, 2949
CviQI GTAC 3 cut(s) 1532, 2777, 2949
DraI TTTAAA 2 cut(s) 573, 2487
EaeI YGGCCR 2 cut(s) 1230, 2988
Eam1104I CTCTTC 3 cut(s) 860, 2257, 2294
EarI CTCTTC 3 cut(s) 860, 2257, 2294
Ecl136II GAGCTC 2 cut(s) 40, 853
Eco130I CCWWGG 1 cut(s) 3006
Eco24I GRGCYC 3 cut(s) 42, 855, 2035
Eco31I GGTCTC 1 cut(s) 1498
Eco32I GATATC 2 cut(s) 340, 721
Eco47I GGWCC 3 cut(s) 2553, 2693, 2959
Eco53kI GAGCTC 2 cut(s) 40, 853
Eco57I CTGAAG 3 cut(s) 228, 1622, 2702
Eco88I CYCGRG 2 cut(s) 20, 2924
EcoICRI GAGCTC 2 cut(s) 40, 853
EcoO109I RGGNCCY 1 cut(s) 2553
EcoRI GAATTC 1 cut(s) 70
EcoRII CCWGG 1 cut(s) 1141
EcoRV GATATC 2 cut(s) 340, 721
EcoT14I CCWWGG 1 cut(s) 3006
EcoT38I GRGCYC 3 cut(s) 42, 855, 2035
ErhI CCWWGG 1 cut(s) 3006
FalI AAGNNNNNCTT 2 cut(s) 2744, 2776
FaqI GGGAC 2 cut(s) 135, 1790
FauI CCCGC 1 cut(s) 2992
FbaI TGATCA 1 cut(s) 676
FblI GTMKAC 2 cut(s) 2670, 2707
Fnu4HI GCNGC 5 cut(s) 2133, 2343, 2817, 3012, 3045
FokI GGATG 7 cut(s) 554, 656, 1248, 1727, 2380, 2702, 2922
FriOI GRGCYC 3 cut(s) 42, 855, 2035
Fsp4HI GCNGC 5 cut(s) 2133, 2343, 2817, 3012, 3045
GlaI GCGC 2 cut(s) 176, 1123
GluI GCNGC 5 cut(s) 2133, 2343, 2817, 3012, 3045
GsuI CTGGAG 4 cut(s) 1059, 1956, 2355, 2841
HaeIII GGCC 6 cut(s) 14, 583, 1232, 1877, 2859, 2990
HapII CCGG 2 cut(s) 11, 764
HgaI GACGC 2 cut(s) 1920, 2511
HhaI GCGC 2 cut(s) 177, 1124
Hin1I GRCGYC 1 cut(s) 1931
Hin6I GCGC 2 cut(s) 175, 1122
HinP1I GCGC 2 cut(s) 175, 1122
HincII GTYRAC 2 cut(s) 2085, 2671
HindII GTYRAC 2 cut(s) 2085, 2671
HindIII AAGCTT 2 cut(s) 1832, 2735
HpaI GTTAAC 1 cut(s) 2085
HpaII CCGG 2 cut(s) 11, 764
HphI GGTGA 7 cut(s) 609, 686, 1352, 1356, 1812, 2170, 2500
Hpy166II GTNNAC 6 cut(s) 533, 1400, 1948, 2085, 2671, 2708
Hpy8I GTNNAC 6 cut(s) 533, 1400, 1948, 2085, 2671, 2708
Hpy99I CGWCG 1 cut(s) 2672
HpyCH4III ACNGT 7 cut(s) 486, 526, 560, 1591, 1690, 2482, 2781
HpyCH4IV ACGT 1 cut(s) 2667
HpyF10VI GCNNNNNNNGC 9 cut(s) 962, 971, 1090, 2734, 2842, 2873, 2926, 2996, 3011
HpySE526I ACGT 1 cut(s) 2667
Hsp92I GRCGYC 1 cut(s) 1931
HspAI GCGC 2 cut(s) 175, 1122
Ksp22I TGATCA 1 cut(s) 676
KspAI GTTAAC 1 cut(s) 2085
LguI GCTCTTC 2 cut(s) 860, 2294
LmnI GCTCC 8 cut(s) 199, 848, 1040, 1646, 2038, 2540, 2650, 3002
Lsp1109I GCAGC 5 cut(s) 2144, 2329, 2803, 3023, 3031
LweI GCATC 6 cut(s) 600, 864, 943, 1446, 2184, 2965
MaeII ACGT 1 cut(s) 2667
MaeIII GTNAC 5 cut(s) 262, 1430, 2176, 2506, 3054
MfeI CAATTG 2 cut(s) 145, 1795
MflI RGATCY 4 cut(s) 1138, 1178, 2016, 2592
MhlI GDGCHC 5 cut(s) 42, 50, 855, 1402, 2035
MlsI TGGCCA 2 cut(s) 1232, 2990
MluNI TGGCCA 2 cut(s) 1232, 2990
MlyI GAGTC 5 cut(s) 70, 667, 722, 1986, 2101
MmeI TCCRAC 3 cut(s) 438, 482, 1714
Mox20I TGGCCA 2 cut(s) 1232, 2990
MroXI GAANNNNTTC 2 cut(s) 784, 1299
MscI TGGCCA 2 cut(s) 1232, 2990
MslI CAYNNNNRTG 2 cut(s) 669, 1749
Msp20I TGGCCA 2 cut(s) 1232, 2990
MspCI CTTAAG 1 cut(s) 382
MspI CCGG 2 cut(s) 11, 764
MspR9I CCNGG 2 cut(s) 765, 1143
MunI CAATTG 2 cut(s) 145, 1795
Mva1269I GAATGC 2 cut(s) 277, 845
MvaI CCWGG 1 cut(s) 1143
MwoI GCNNNNNNNGC 9 cut(s) 962, 971, 1090, 2734, 2842, 2873, 2926, 2996, 3011
NciI CCSGG 1 cut(s) 765
NcoI CCATGG 1 cut(s) 3006
NmuCI GTSAC 3 cut(s) 262, 2176, 2506
NspI RCATGY 1 cut(s) 2547
PaeI GCATGC 1 cut(s) 2547
PaeR7I CTCGAG 1 cut(s) 20
PagI TCATGA 1 cut(s) 325
PciSI GCTCTTC 2 cut(s) 860, 2294
PctI GAATGC 2 cut(s) 277, 845
PdmI GAANNNNTTC 2 cut(s) 784, 1299
PfeI GAWTC 7 cut(s) 184, 1361, 1922, 2279, 2444, 2498, 2682
PkrI GCNGC 5 cut(s) 2134, 2344, 2818, 3013, 3046
PleI GAGTC 5 cut(s) 69, 666, 722, 1986, 2100
PpsI GAGTC 5 cut(s) 69, 666, 722, 1986, 2100
PpuMI RGGWCCY 1 cut(s) 2553
PshAI GACNNNNGTC 1 cut(s) 1053
PshBI ATTAAT 2 cut(s) 252, 2613
PsiI TTATAA 3 cut(s) 1577, 1956, 2337
Psp124BI GAGCTC 2 cut(s) 42, 855
Psp5II RGGWCCY 1 cut(s) 2553
Psp6I CCWGG 1 cut(s) 1141
PspGI CCWGG 1 cut(s) 1141
PspPI GGNCC 5 cut(s) 13, 2553, 2693, 2857, 2959
PspPPI RGGWCCY 1 cut(s) 2553
PstNI CAGNNNCTG 3 cut(s) 1148, 1322, 2019
PsuI RGATCY 4 cut(s) 1138, 1178, 2016, 2592
RsaI GTAC 3 cut(s) 1533, 2778, 2950
RsaNI GTAC 3 cut(s) 1532, 2777, 2949
RseI CAYNNNNRTG 2 cut(s) 669, 1749
SacI GAGCTC 2 cut(s) 42, 855
SalI GTCGAC 1 cut(s) 2669
SapI GCTCTTC 2 cut(s) 860, 2294
SatI GCNGC 5 cut(s) 2133, 2343, 2817, 3012, 3045
Sau96I GGNCC 5 cut(s) 13, 2553, 2693, 2857, 2959
SchI GAGTC 5 cut(s) 70, 667, 722, 1986, 2101
ScrFI CCNGG 2 cut(s) 765, 1143
SduI GDGCHC 5 cut(s) 42, 50, 855, 1402, 2035
SfaNI GCATC 6 cut(s) 600, 864, 943, 1446, 2184, 2965
SfcI CTRYAG 1 cut(s) 1587
Sfr274I CTCGAG 1 cut(s) 20
SinI GGWCC 3 cut(s) 2553, 2693, 2959
SlaI CTCGAG 1 cut(s) 20
SmiMI CAYNNNNRTG 2 cut(s) 669, 1749
SmlI CTYRAG 7 cut(s) 20, 41, 382, 1514, 1994, 2283, 2915
SmoI CTYRAG 7 cut(s) 20, 41, 382, 1514, 1994, 2283, 2915
SpeI ACTAGT 1 cut(s) 2638
SphI GCATGC 1 cut(s) 2547
SsiI CCGC 3 cut(s) 77, 2962, 2999
SstI GAGCTC 2 cut(s) 42, 855
StyD4I CCNGG 2 cut(s) 763, 1141
StyI CCWWGG 1 cut(s) 3006
TaaI ACNGT 7 cut(s) 486, 526, 560, 1591, 1690, 2482, 2781
TaiI ACGT 1 cut(s) 2670
TaqI TCGA 7 cut(s) 21, 1663, 1788, 1816, 2206, 2670, 2698
TatI WGTACW 1 cut(s) 1531
TfiI GAWTC 7 cut(s) 184, 1361, 1922, 2279, 2444, 2498, 2682
TscAI CASTG 7 cut(s) 491, 691, 721, 1466, 1783, 1830, 2029
TseFI GTSAC 3 cut(s) 262, 2176, 2506
TseI GCWGC 5 cut(s) 2132, 2342, 2816, 3011, 3044
Tsp45I GTSAC 3 cut(s) 262, 2176, 2506
TspGWI ACGGA 2 cut(s) 312, 1151
TspRI CASTG 7 cut(s) 491, 691, 721, 1466, 1783, 1830, 2029
Vha464I CTTAAG 1 cut(s) 382
VneI GTGCAC 1 cut(s) 1398
VpaK11BI GGWCC 3 cut(s) 2553, 2693, 2959
VspI ATTAAT 2 cut(s) 252, 2613
XapI RAATTY 6 cut(s) 70, 162, 424, 652, 985, 2381
XbaI TCTAGA 2 cut(s) 980, 989
XceI RCATGY 1 cut(s) 2547
XcmI CCANNNNNNNNNTGG 1 cut(s) 1955
XhoI CTCGAG 1 cut(s) 20
XmiI GTMKAC 2 cut(s) 2670, 2707
XmnI GAANNNNTTC 2 cut(s) 784, 1299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.