AT4G25940

clathrin assembly protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0012345
Physical Location & Seq
Reverse (-)
13169506 .. 13172904
3399 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G25940.1

Sequence Viewer

Length: 1806 bp
ATGGCAACGTTTAACAGCTTCCGTAAAGCTGTCGGAGCAATCAAAGATTCCACTACCGTAAGTATCGCCAAGGTCAACAGCGAATTCAAGGATTTGGATGTTGCGATCGTAAAGGCCACAAATCACGTAGAATCTGCTCCCAAAGAACGTCACATTCGTAGAATATTCTCGGCGACATCGGTAGTGCAACCACGAGCAGATGTTGCTTACTGCATTCACGCATTAGCCAAAAGATTGTCAAAAACTCGCAATTGGGTTGTTGCGATCAAGGTGTTAATAGTCATTCATAGAACACTAAGAGAAGGTGATCCAACATTTAGAGAAGAGCTTCTCAATTACTCACATAGAGGACATATACTTCGAATATCAAACTTCAAAGACGATACAAGTCCTCTTGCTTGGGATTGCTCTGCGTGGATTAGGACATACGCGCTTTTCCTCGAGGAGCGGCTTGAATGCTATCGGGTTTTGAAGTATGACATAGAAGCAGAACGTTTACCAAAAGGTTCAGGTGCATCTTCAAAGAACGTAGATTTCAATGCTTCTCAAACGTATAGAACAAGGATGCTCTCCGATGAAGAATTGCTAGAGCAGTTACCTGCTTTGCAACAGCTGCTTTATAGGCTTATTGGTTGTCAGCCTGAAGGATCAGCATATAGCAACTACCTAATCCAGTATGCTCTTGCATTGGTGCTTAAAGAAAGCTTCAAAATCTACTGTGCCATTAATGATGGAATCATTAATCTTGTAGACATGTTCTTTGAGATGTCAAGACATGATGCAGTTAAAGCTCTAAATATATATAAACGAGCTGGCCAACAGGCTGAAAATTTGGCTGACTTTTATGAATACTGCAAAGGTCTAGAGCTAGCGAGAAACTTTCAGTTCCCAACCTTAAGACAGCCTCCTCCTTCTTTCCTAGCAACAATGGAAGACTACATTAAAGAAGCGCCTCAAAGTGGTTCTGTACAGAAAAAGCTGGAGTATCAGGAAAAAGAGGAAGAAGAACAAGAAGAAGAAGAAGCAGAACACTCTGTCCAGCCTGAAGAACCTGCAGAAGCCGATAATCAAAAGGAAAACAGCGAAGGAGACCAGCCGCTTATCGAAGAAGAGGAAGAAGACCAAGAAAAAATAGAAGAGGAAGATGCTAAACCTTCTTTCCTGATAGACACTGATGATCTGCTGGGACTAAATGAGATCAACCCTAAAGCCGCAGAGATAGAGGACCGAAATGCATTGGCTCTTGCAATATATCCACCAGGTCATGAAGCTCCAGGACCATCAAACATTTTAAGTTTAATAGAAACCGGTGGATCCGGCTGGGAATTGGCACTGGTCACTCCTCAGAACAACAACAACAACAATAATCCTCGCCCTGCGCCTAACACCAAACTTGCAGGAGGATTTGACAATCTATTGCTTGACAGTCTGTACGAGGATGATTCAGCTAGGAGACAGATCCAGCTAACCAATGCGGGCTATGGACATGGTGGCATAGACACAACAGCAGCACCGCCAAACCCATTCCAAATGCAACAAGATCCTTTTGCAATGTCCAACAACATTGCTCCTCCCACTAATGTTCAAATGGCAATGCAACAACAACAGCAACAACAGATGACGATGATGCATCAGAGTCCCTACAATTACACTCATCCTCATGATTATCATCAAAATCATCATCATCATCAGTTCTCAGCCGGTCCTTCTCCTTCTAATCCTTTTGGAGACGCTTTCCTTGCCCTCCCACCTCCGCCAGGATCAGCTGGTCCGCAACAAAACAACCATCATCATATGCTCCTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANTH

Protein Analysis

601

Amino Acids

67.77

Weight (kDa)

5.07

Isoelectric Point (pI)

56.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANTH PF07651 31 - 316 1e-96 ANTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012345)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25940 AT5G57200
fragaria_vesca FvH4_4g07320
malus_domestica MD13G1242200.v1.1 MD16G1249100.v1.1
prunus_persica Prupe.1G075800_v2.0.a1 Prupe.1G076000_v2.0.a1
pyrus_communis pycom13g21390 pycom16g20850
rosa_chinensis RchiOBHm_Chr4g0399681
rosa_laevigata RLG00000009247
rosa_multiflora Rmu_co8405013.1_g000001
rosa_roxburghii Rroxscaffold_5G00344590
rosa_rugosa Rorug04G0018100
rosa_samantha Rh4AG095900 Rh4BG093400 Rh4CG104500 Rh4DG088500
rosa_wichuraiana Rw4G007900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 440
Acc36I ACCTGC 2 cut(s) 607, 1060
AccBSI CCGCTC 1 cut(s) 448
AccI GTMKAC 1 cut(s) 750
AccII CGCG 1 cut(s) 431
AciI CCGC 7 cut(s) 448, 1097, 1212, 1475, 1514, 1754, 1772
AclI AACGTT 2 cut(s) 8, 493
AclWI GGATC 7 cut(s) 302, 655, 1308, 1321, 1453, 1535, 1768
AcoI YGGCCR 1 cut(s) 814
AcsI RAATTY 2 cut(s) 83, 829
AcuI CTGAAG 2 cut(s) 663, 1065
AfaI GTAC 2 cut(s) 969, 1433
AfiI CCNNNNNNNGG 2 cut(s) 959, 1757
AflII CTTAAG 1 cut(s) 895
AflIII ACRYGT 1 cut(s) 753
AgeI ACCGGT 1 cut(s) 1307
AgsI TTSAA 8 cut(s) 88, 376, 455, 472, 522, 538, 709, 1586
AjnI CCWGG 3 cut(s) 1258, 1273, 1756
AloI GAACNNNNNNTCC 2 cut(s) 1020, 1052
Alw26I GTCTC 3 cut(s) 1083, 1447, 1722
AlwI GGATC 7 cut(s) 302, 655, 1308, 1321, 1453, 1535, 1768
Ama87I CYCGRG 1 cut(s) 440
AoxI GGCC 2 cut(s) 114, 814
ApeKI GCWGC 2 cut(s) 613, 1508
ApoI RAATTY 2 cut(s) 83, 829
ArsI GACNNNNNNTTYG 4 cut(s) 342, 374, 743, 775
AseI ATTAAT 2 cut(s) 726, 741
AsiGI ACCGGT 1 cut(s) 1307
Asp700I GAANNNNTTC 1 cut(s) 327
AspLEI GCGC 3 cut(s) 433, 952, 1381
AspS9I GGNCC 4 cut(s) 1225, 1277, 1703, 1769
AsuHPI GGTGA 1 cut(s) 317
AsuII TTCGAA 1 cut(s) 361
AsuNHI GCTAGC 1 cut(s) 868
AvaI CYCGRG 1 cut(s) 440
AvaII GGWCC 4 cut(s) 1225, 1277, 1703, 1769
BalI TGGCCA 1 cut(s) 816
BamHI GGATCC 1 cut(s) 1313
BauI CACGAG 1 cut(s) 192
BbsI GAAGAC 2 cut(s) 939, 1125
BbvI GCAGC 2 cut(s) 600, 1520
BccI CCATC 3 cut(s) 725, 1288, 1794
BciT130I CCWGG 3 cut(s) 1260, 1275, 1758
BcoDI GTCTC 3 cut(s) 1083, 1447, 1722
BfaI CTAG 6 cut(s) 587, 863, 869, 920, 1449, 1804
BfmI CTRYAG 1 cut(s) 1053
BfoI RGCGCY 1 cut(s) 953
BfrI CTTAAG 1 cut(s) 895
BfuAI ACCTGC 2 cut(s) 607, 1060
BisI GCNGC 5 cut(s) 449, 614, 1097, 1212, 1509
BlsI GCNGC 5 cut(s) 450, 615, 1098, 1213, 1510
Bme1390I CCNGG 3 cut(s) 1260, 1275, 1758
Bme18I GGWCC 4 cut(s) 1225, 1277, 1703, 1769
BmeT110I CYCGRG 1 cut(s) 440
BmgT120I GGNCC 4 cut(s) 1225, 1277, 1703, 1769
BmiI GGNNCC 1 cut(s) 1315
BmrFI CCNGG 3 cut(s) 1260, 1275, 1758
BmsI GCATC 6 cut(s) 524, 555, 769, 1135, 1617, 1639
BmtI GCTAGC 1 cut(s) 872
BpiI GAAGAC 2 cut(s) 939, 1125
BpmI CTGGAG 2 cut(s) 1001, 1257
Bpu14I TTCGAA 1 cut(s) 361
BsaAI YACGTR 1 cut(s) 127
BsaBI GATNNNNATC 1 cut(s) 1668
BsaI GGTCTC 1 cut(s) 1083
BsaJI CCNNGG 1 cut(s) 69
BsaWI WCCGGW 1 cut(s) 1307
Bsc4I CCNNNNNNNGG 2 cut(s) 959, 1757
Bse118I RCCGGY 2 cut(s) 1307, 1700
Bse1I ACTGG 2 cut(s) 673, 1338
Bse3DI GCAATG 3 cut(s) 1557, 1563, 1599
Bse8I GATNNNNATC 1 cut(s) 1668
BseBI CCWGG 3 cut(s) 1260, 1275, 1758
BseDI CCNNGG 1 cut(s) 69
BseGI GGATG 4 cut(s) 103, 570, 1444, 1654
BseJI GATNNNNATC 1 cut(s) 1668
BseLI CCNNNNNNNGG 2 cut(s) 959, 1757
BseMI GCAATG 3 cut(s) 1557, 1563, 1599
BseMII CTCAG 2 cut(s) 1358, 1710
BseNI ACTGG 2 cut(s) 673, 1338
BseRI GAGGAG 5 cut(s) 458, 897, 1332, 1560, 1790
BseXI GCAGC 2 cut(s) 600, 1520
BseYI CCCAGC 2 cut(s) 1183, 1320
Bsh1236I CGCG 1 cut(s) 431
Bsh1285I CGRYCG 1 cut(s) 108
BshFI GGCC 2 cut(s) 116, 816
BshTI ACCGGT 1 cut(s) 1307
BsiEI CGRYCG 1 cut(s) 108
BsiHKCI CYCGRG 1 cut(s) 440
BsiSI CCGG 3 cut(s) 1308, 1317, 1701
BslFI GGGAC 2 cut(s) 1200, 1623
BslI CCNNNNNNNGG 2 cut(s) 959, 1757
BsmAI GTCTC 3 cut(s) 1083, 1447, 1722
BsmBI CGTCTC 1 cut(s) 1722
BsmFI GGGAC 2 cut(s) 1200, 1623
BsmI GAATGC 2 cut(s) 213, 461
BsnI GGCC 2 cut(s) 116, 816
Bso31I GGTCTC 1 cut(s) 1083
BsoBI CYCGRG 1 cut(s) 440
Bsp119I TTCGAA 1 cut(s) 361
Bsp1407I TGTACA 1 cut(s) 967
BspACI CCGC 7 cut(s) 448, 1097, 1212, 1475, 1514, 1754, 1772
BspANI GGCC 2 cut(s) 116, 816
BspCNI CTCAG 2 cut(s) 1357, 1709
BspFNI CGCG 1 cut(s) 431
BspHI TCATGA 2 cut(s) 1264, 1660
BspLI GGNNCC 1 cut(s) 1315
BspMAI CTGCAG 1 cut(s) 1057
BspMI ACCTGC 2 cut(s) 607, 1060
BspOI GCTAGC 1 cut(s) 872
BspPI GGATC 7 cut(s) 302, 655, 1308, 1321, 1453, 1535, 1768
BspQI GCTCTTC 1 cut(s) 318
BspT104I TTCGAA 1 cut(s) 361
BspTI CTTAAG 1 cut(s) 895
BspTNI GGTCTC 1 cut(s) 1083
BsrBI CCGCTC 1 cut(s) 448
BsrDI GCAATG 3 cut(s) 1557, 1563, 1599
BsrFI RCCGGY 2 cut(s) 1307, 1700
BsrGI TGTACA 1 cut(s) 967
BsrI ACTGG 2 cut(s) 673, 1338
BssAI RCCGGY 2 cut(s) 1307, 1700
BssECI CCNNGG 1 cut(s) 69
BssSI CACGAG 1 cut(s) 192
BssT1I CCWWGG 1 cut(s) 69
Bst2BI CACGAG 1 cut(s) 192
Bst2UI CCWGG 3 cut(s) 1260, 1275, 1758
Bst4CI ACNGT 3 cut(s) 58, 719, 1427
Bst6I CTCTTC 3 cut(s) 318, 1104, 1131
BstAFI CTTAAG 1 cut(s) 895
BstAPI GCANNNNNTGC 2 cut(s) 203, 613
BstAUI TGTACA 1 cut(s) 967
BstBAI YACGTR 1 cut(s) 127
BstBI TTCGAA 1 cut(s) 361
BstC8I GCNNGC 3 cut(s) 814, 870, 1477
BstDEI CTNAG 3 cut(s) 296, 1344, 1696
BstENI CCTNNNNNAGG 1 cut(s) 1755
BstF5I GGATG 4 cut(s) 103, 570, 1444, 1654
BstFNI CGCG 1 cut(s) 431
BstH2I RGCGCY 1 cut(s) 953
BstHHI GCGC 3 cut(s) 433, 952, 1381
BstMAI GTCTC 3 cut(s) 1083, 1447, 1722
BstMCI CGRYCG 1 cut(s) 108
BstMWI GCNNNNNNNGC 6 cut(s) 35, 203, 613, 622, 788, 1739
BstNI CCWGG 3 cut(s) 1260, 1275, 1758
BstNSI RCATGY 1 cut(s) 757
BstSCI CCNGG 3 cut(s) 1258, 1273, 1756
BstSFI CTRYAG 1 cut(s) 1053
BstUI CGCG 1 cut(s) 431
BstV1I GCAGC 2 cut(s) 600, 1520
BstV2I GAAGAC 2 cut(s) 939, 1125
BstX2I RGATCY 3 cut(s) 1313, 1458, 1540
BstYI RGATCY 3 cut(s) 1313, 1458, 1540
BsuRI GGCC 2 cut(s) 116, 816
BtsCI GGATG 4 cut(s) 103, 570, 1444, 1654
BtsIMutI CAGTG 2 cut(s) 1170, 1331
BveI ACCTGC 2 cut(s) 607, 1060
Cac8I GCNNGC 3 cut(s) 814, 870, 1477
CciI TCATGA 2 cut(s) 1264, 1660
CfoI GCGC 3 cut(s) 433, 952, 1381
Cfr10I RCCGGY 2 cut(s) 1307, 1700
Cfr13I GGNCC 4 cut(s) 1225, 1277, 1703, 1769
CseI GACGC 1 cut(s) 1739
CsiI ACCWGGT 1 cut(s) 1258
Csp6I GTAC 2 cut(s) 968, 1432
CspAI ACCGGT 1 cut(s) 1307
CviAII CATG 5 cut(s) 754, 776, 1265, 1487, 1661
CviQI GTAC 2 cut(s) 968, 1432
DdeI CTNAG 3 cut(s) 296, 1344, 1696
EaeI YGGCCR 1 cut(s) 814
Eam1104I CTCTTC 3 cut(s) 318, 1104, 1131
EarI CTCTTC 3 cut(s) 318, 1104, 1131
EciI GGCGGA 1 cut(s) 1743
Eco130I CCWWGG 1 cut(s) 69
Eco31I GGTCTC 1 cut(s) 1083
Eco47I GGWCC 4 cut(s) 1225, 1277, 1703, 1769
Eco57I CTGAAG 2 cut(s) 663, 1065
Eco88I CYCGRG 1 cut(s) 440
EcoNI CCTNNNNNAGG 1 cut(s) 1755
EcoRI GAATTC 1 cut(s) 83
EcoRII CCWGG 3 cut(s) 1258, 1273, 1756
EcoT14I CCWWGG 1 cut(s) 69
EcoT22I ATGCAT 2 cut(s) 1237, 1632
ErhI CCWWGG 1 cut(s) 69
Esp3I CGTCTC 1 cut(s) 1722
FaeI CATG 5 cut(s) 757, 779, 1268, 1490, 1664
FaqI GGGAC 2 cut(s) 1200, 1623
FatI CATG 5 cut(s) 753, 775, 1264, 1486, 1660
FauI CCCGC 1 cut(s) 1468
FauNDI CATATG 1 cut(s) 1794
FblI GTMKAC 1 cut(s) 750
Fnu4HI GCNGC 5 cut(s) 449, 614, 1097, 1212, 1509
FokI GGATG 4 cut(s) 110, 577, 1451, 1641
Fsp4HI GCNGC 5 cut(s) 449, 614, 1097, 1212, 1509
FspBI CTAG 6 cut(s) 587, 863, 869, 920, 1449, 1804
GlaI GCGC 3 cut(s) 432, 951, 1380
GluI GCNGC 5 cut(s) 449, 614, 1097, 1212, 1509
GsaI CCCAGC 2 cut(s) 1187, 1324
GsuI CTGGAG 2 cut(s) 1001, 1257
HaeII RGCGCY 1 cut(s) 953
HaeIII GGCC 2 cut(s) 116, 816
HapII CCGG 3 cut(s) 1308, 1317, 1701
HgaI GACGC 1 cut(s) 1739
HhaI GCGC 3 cut(s) 433, 952, 1381
Hin1II CATG 5 cut(s) 757, 779, 1268, 1490, 1664
Hin6I GCGC 3 cut(s) 431, 950, 1379
HinP1I GCGC 3 cut(s) 431, 950, 1379
HincII GTYRAC 1 cut(s) 76
HindII GTYRAC 1 cut(s) 76
HindIII AAGCTT 1 cut(s) 703
HinfI GANTC 5 cut(s) 47, 131, 735, 1442, 1636
HpaII CCGG 3 cut(s) 1308, 1317, 1701
HphI GGTGA 1 cut(s) 317
Hpy166II GTNNAC 3 cut(s) 76, 497, 751
Hpy188I TCNGA 4 cut(s) 35, 574, 1347, 1635
Hpy188III TCNNGA 6 cut(s) 771, 863, 989, 1162, 1265, 1661
Hpy8I GTNNAC 3 cut(s) 76, 497, 751
HpyAV CCTTC 7 cut(s) 296, 638, 921, 1079, 1164, 1716, 1722
HpyCH4III ACNGT 3 cut(s) 58, 719, 1427
HpyCH4IV ACGT 6 cut(s) 8, 126, 148, 493, 528, 551
HpyF10VI GCNNNNNNNGC 6 cut(s) 35, 203, 613, 622, 788, 1739
HpyF3I CTNAG 3 cut(s) 296, 1344, 1696
HpySE526I ACGT 6 cut(s) 8, 126, 148, 493, 528, 551
Hsp92II CATG 5 cut(s) 757, 779, 1268, 1490, 1664
HspAI GCGC 3 cut(s) 431, 950, 1379
LguI GCTCTTC 1 cut(s) 318
LmnI GCTCC 6 cut(s) 35, 142, 445, 1276, 1573, 1803
Lsp1109I GCAGC 2 cut(s) 600, 1520
LweI GCATC 6 cut(s) 524, 555, 769, 1135, 1617, 1639
MabI ACCWGGT 1 cut(s) 1258
MaeI CTAG 6 cut(s) 587, 863, 869, 920, 1449, 1804
MaeII ACGT 6 cut(s) 8, 126, 148, 493, 528, 551
MaeIII GTNAC 3 cut(s) 149, 594, 1336
MbiI CCGCTC 1 cut(s) 448
MfeI CAATTG 1 cut(s) 250
MflI RGATCY 3 cut(s) 1313, 1458, 1540
MlsI TGGCCA 1 cut(s) 816
MluCI AATT 7 cut(s) 83, 250, 334, 581, 829, 1325, 1645
MluNI TGGCCA 1 cut(s) 816
MlyI GAGTC 1 cut(s) 1645
MmeI TCCRAC 3 cut(s) 13, 335, 1581
Mox20I TGGCCA 1 cut(s) 816
Mph1103I ATGCAT 2 cut(s) 1237, 1632
MroXI GAANNNNTTC 1 cut(s) 327
MscI TGGCCA 1 cut(s) 816
MslI CAYNNNNRTG 1 cut(s) 1659
Msp20I TGGCCA 1 cut(s) 816
MspA1I CMGCKG 2 cut(s) 613, 1766
MspCI CTTAAG 1 cut(s) 895
MspI CCGG 3 cut(s) 1308, 1317, 1701
MspR9I CCNGG 3 cut(s) 1260, 1275, 1758
MunI CAATTG 1 cut(s) 250
Mva1269I GAATGC 2 cut(s) 213, 461
MvaI CCWGG 3 cut(s) 1260, 1275, 1758
MvnI CGCG 1 cut(s) 431
MwoI GCNNNNNNNGC 6 cut(s) 35, 203, 613, 622, 788, 1739
NdeI CATATG 1 cut(s) 1794
NheI GCTAGC 1 cut(s) 868
NlaIII CATG 5 cut(s) 757, 779, 1268, 1490, 1664
NlaIV GGNNCC 1 cut(s) 1315
NmeAIII GCCGAG 1 cut(s) 149
NmuCI GTSAC 2 cut(s) 149, 1336
NsiI ATGCAT 2 cut(s) 1237, 1632
NspI RCATGY 1 cut(s) 757
NspV TTCGAA 1 cut(s) 361
PaeR7I CTCGAG 1 cut(s) 440
PagI TCATGA 2 cut(s) 1264, 1660
PciI ACATGT 1 cut(s) 753
PciSI GCTCTTC 1 cut(s) 318
PcsI WCGNNNNNNNCGW 1 cut(s) 154
PctI GAATGC 2 cut(s) 213, 461
PdmI GAANNNNTTC 1 cut(s) 327
PfeI GAWTC 4 cut(s) 47, 131, 735, 1442
PfoI TCCNGGA 1 cut(s) 1273
PinAI ACCGGT 1 cut(s) 1307
PkrI GCNGC 5 cut(s) 450, 615, 1098, 1213, 1510
Ple19I CGATCG 1 cut(s) 108
PleI GAGTC 1 cut(s) 1644
PpsI GAGTC 1 cut(s) 1644
Ppu21I YACGTR 1 cut(s) 127
PscI ACATGT 1 cut(s) 753
PshBI ATTAAT 2 cut(s) 726, 741
Psp1406I AACGTT 2 cut(s) 8, 493
Psp6I CCWGG 3 cut(s) 1258, 1273, 1756
PspFI CCCAGC 2 cut(s) 1183, 1320
PspGI CCWGG 3 cut(s) 1258, 1273, 1756
PspN4I GGNNCC 1 cut(s) 1315
PspPI GGNCC 4 cut(s) 1225, 1277, 1703, 1769
PspXI VCTCGAGB 1 cut(s) 440
PstI CTGCAG 1 cut(s) 1057
PsuI RGATCY 3 cut(s) 1313, 1458, 1540
PvuI CGATCG 1 cut(s) 108
PvuII CAGCTG 2 cut(s) 613, 1766
RsaI GTAC 2 cut(s) 969, 1433
RsaNI GTAC 2 cut(s) 968, 1432
RseI CAYNNNNRTG 1 cut(s) 1659
SapI GCTCTTC 1 cut(s) 318
SatI GCNGC 5 cut(s) 449, 614, 1097, 1212, 1509
Sau96I GGNCC 4 cut(s) 1225, 1277, 1703, 1769
SchI GAGTC 1 cut(s) 1645
ScrFI CCNGG 3 cut(s) 1260, 1275, 1758
SexAI ACCWGGT 1 cut(s) 1258
SfaNI GCATC 6 cut(s) 524, 555, 769, 1135, 1617, 1639
SfcI CTRYAG 1 cut(s) 1053
Sfr274I CTCGAG 1 cut(s) 440
SfuI TTCGAA 1 cut(s) 361
SinI GGWCC 4 cut(s) 1225, 1277, 1703, 1769
SlaI CTCGAG 1 cut(s) 440
SmiMI CAYNNNNRTG 1 cut(s) 1659
SmlI CTYRAG 2 cut(s) 440, 895
SmoI CTYRAG 2 cut(s) 440, 895
Sse9I AATT 7 cut(s) 83, 250, 334, 581, 829, 1325, 1645
SsiI CCGC 7 cut(s) 448, 1097, 1212, 1475, 1514, 1754, 1772
SspI AATATT 1 cut(s) 165
SspMI CTAG 6 cut(s) 587, 863, 869, 920, 1449, 1804
StyD4I CCNGG 3 cut(s) 1258, 1273, 1756
StyI CCWWGG 1 cut(s) 69
TaaI ACNGT 3 cut(s) 58, 719, 1427
TaiI ACGT 6 cut(s) 11, 129, 151, 496, 531, 554
TaqI TCGA 3 cut(s) 361, 441, 1104
TaqII GACCGA 1 cut(s) 1242
TasI AATT 7 cut(s) 83, 250, 334, 581, 829, 1325, 1645
TatI WGTACW 1 cut(s) 967
TauI GCSGC 3 cut(s) 451, 1099, 1214
TfiI GAWTC 4 cut(s) 47, 131, 735, 1442
TscAI CASTG 2 cut(s) 1177, 1338
TseFI GTSAC 2 cut(s) 149, 1336
TseI GCWGC 2 cut(s) 613, 1508
Tsp45I GTSAC 2 cut(s) 149, 1336
TspDTI ATGAA 4 cut(s) 275, 591, 861, 1281
TspGWI ACGGA 1 cut(s) 11
TspRI CASTG 2 cut(s) 1177, 1338
Vha464I CTTAAG 1 cut(s) 895
VpaK11BI GGWCC 4 cut(s) 1225, 1277, 1703, 1769
VspI ATTAAT 2 cut(s) 726, 741
XagI CCTNNNNNAGG 1 cut(s) 1755
XapI RAATTY 2 cut(s) 83, 829
XbaI TCTAGA 1 cut(s) 862
XceI RCATGY 1 cut(s) 757
XhoI CTCGAG 1 cut(s) 440
XmiI GTMKAC 1 cut(s) 750
XmnI GAANNNNTTC 1 cut(s) 327
XspI CTAG 6 cut(s) 587, 863, 869, 920, 1449, 1804
Zsp2I ATGCAT 2 cut(s) 1237, 1632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.