Prupe.1G075800_v2.0.a1

clathrin assembly

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0012345
Physical Location & Seq
Forward (+)
5421124 .. 5425350
4227 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G075800.1

Sequence Viewer

Length: 1746 bp
ATGGGCACGTTCCAGAGCTTTAGGAAGGCCTATGGAGCTCTGAAGGACTCTACCAAGGTTGGCCTCATCAAGGTCAACAGCGAATTCAAGGATTTGGATATTGCCACGGTGAAGGCCACCAGTCACGTTGAGTGCCCTCCGAAGGAACGCCATGTTCGAAAGATTTTCTCTGCAACATCTGTGACACGTCCACGGGCAGATGTGGCATACTGTATTCATGCTCTGGCCAAGAGATTGTCCAAGACTCGGAGCTGGATTGTTGCCATAAAGACATTGATAGTTGTTCATAGAACATTGAGAGAGGGTGATCCTACATTTAGAGAAGAGCTTCTAAACTATTCTCAGAGAGGACACATTCTCCAAATTTCCAATTTTAAAGATGACTCAAGTCCCCTTGCTTGGGATTGCTCTGCTTGGGTTAGGACATATGCCCTCTTTCTAGAAGAACGGCTGGAGTGTTTCCGGGTTCTGAAGTATGACATCGAGTCGGAGCGTTTGACAAAAACATCACCAGGATCAACAAAGGTACATAGTAGAACACGAACATTGGCTGCCGATGAGCTGTTGGAGCAACTACCTGCACTGCAGCAACTTCTTTACCGCCTCATGGGCTGCCAGCCTGAGGGAACAGCTTTTAACAATTACCTCATACAATATGCCTTAGCTCTGGTTTTAAAAGAGAGCTTTAAAATATATTGTGCCATCAACGACGGAATTATAAATCTTGTTGACATGTTCTTTGATATGTCAAGACATGATGCAGTTAAAGCTCTCAATGTTTATAAAAGAGCTGGCCAACAGGCCGAAGCCCTAGCTGATTTTTATGAATATTGCAAGGGTTTGGATCTTGCTAGAACTTTTCAGTTTCCAACATTGAGACAGCCACCTCCATCCTTTCTTGCAACAATGGAGGAGTATATAAAGGAAGCGCCGCAGTCCGGTTCTGTTAACAAGAGACTGGAATACCAGGAGACAGACCAGCAGCCTCAGAAACCTGAAGAACCTCCTCCTCCTCCAGAGCCTGAACAACAAGAAGAAGAAGTTGAGGAGAAAACGGAGGAAGAGGAAGAACGCCAACCTAAGGAAGAGGTAGTTGAACCTCCCCCTTTGATATCAACGGACGACACTGATCTTCTGGGTCTAAGGGAAATAAATCCAAAAGCTGCAGAAATTGAAGAAAGCAATGCCTTGGCTCTTGCAATAGTTCCACAAGGGAACGAACAACAATCTGGAGCAAGTTTCAATGATCTTGCTGGGACTTCAGGCTGGGAGCTAGCACTGGTGACCACACCAAGCAACCATACAAGCCAAGTGCCCATGGACAAGAAGTTTGCTGGTGGCTTTGACAAGCTATTACTTGATAGCTTGTATGAAGATGAAGGTGCCAGGAGACAGATACAGCTCCAGAACGCAGGCTATGGCTACGGTGCAACGAGCTTGCATAACCCGTTTGAACAACAAGCACAACATCCTGTGCAGGATCCATTTGCAATGTCCAACAACATAGCACCCCCAACCAACGTGCAAATGGCGCTAATGGCTCAACAACAACACCAACATCAGCAAATCCTGCAGCAACAGAACCAGCAATATCAACAGCAGCAGAACATGATGATGGTGCCTCACCCTTATTATTCTCAATACCCCCAACAGATGCAGCCCCCGGGTTCTTCGAACCCGTTTGGAGATCCATTCAGCTTCCCTCCTAGTTCAACGCCACACCAGGGAAACCAACACCTAATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANTH

Protein Analysis

582

Amino Acids

65.83

Weight (kDa)

5.34

Isoelectric Point (pI)

60.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012345)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25940 AT5G57200
fragaria_vesca FvH4_4g07320
malus_domestica MD13G1242200.v1.1 MD16G1249100.v1.1
prunus_persica Prupe.1G075800_v2.0.a1 Prupe.1G076000_v2.0.a1
pyrus_communis pycom13g21390 pycom16g20850
rosa_chinensis RchiOBHm_Chr4g0399681
rosa_laevigata RLG00000009247
rosa_multiflora Rmu_co8405013.1_g000001
rosa_roxburghii Rroxscaffold_5G00344590
rosa_rugosa Rorug04G0018100
rosa_samantha Rh4AG095900 Rh4BG093400 Rh4CG104500 Rh4DG088500
rosa_wichuraiana Rw4G007900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 719, 783
Acc36I ACCTGC 1 cut(s) 586
AccB1I GGYRCC 2 cut(s) 1382, 1618
AciI CCGC 2 cut(s) 601, 932
AclWI GGATC 6 cut(s) 302, 523, 852, 1475, 1488, 1682
AcoI YGGCCR 2 cut(s) 225, 793
AcsI RAATTY 2 cut(s) 83, 363
AcuI CTGAAG 4 cut(s) 62, 491, 1017, 1245
AfaI GTAC 1 cut(s) 528
AflIII ACRYGT 2 cut(s) 185, 732
AgsI TTSAA 6 cut(s) 88, 1097, 1175, 1243, 1454, 1713
AhdI GACNNNNNGTC 1 cut(s) 484
AjiI CACGTC 1 cut(s) 188
AjnI CCWGG 4 cut(s) 511, 966, 1385, 1722
Alw21I GWGCWC 1 cut(s) 40
Alw26I GTCTC 4 cut(s) 871, 949, 965, 1384
AlwI GGATC 6 cut(s) 302, 523, 852, 1475, 1488, 1682
AlwNI CAGNNNCTG 1 cut(s) 1022
Ama87I CYCGRG 1 cut(s) 1663
AoxI GGCC 6 cut(s) 27, 61, 114, 225, 793, 801
ApeKI GCWGC 8 cut(s) 551, 586, 612, 982, 1163, 1573, 1600, 1657
ApoI RAATTY 2 cut(s) 83, 363
ArsI GACNNNNNNTTYG 4 cut(s) 722, 754, 1313, 1345
Asp700I GAANNNNTTC 1 cut(s) 327
AspLEI GCGC 2 cut(s) 931, 1534
AsuC2I CCSGG 3 cut(s) 464, 1664, 1665
AsuHPI GGTGA 5 cut(s) 121, 317, 501, 1294, 1616
AsuII TTCGAA 2 cut(s) 157, 1673
AsuNHI GCTAGC 1 cut(s) 1273
AvaI CYCGRG 1 cut(s) 1663
AxyI CCTNAGG 2 cut(s) 621, 1080
BaeGI GKGCMC 3 cut(s) 8, 137, 1317
BalI TGGCCA 2 cut(s) 227, 795
BamHI GGATCC 1 cut(s) 1480
BanI GGYRCC 2 cut(s) 1382, 1618
BanII GRGCYC 1 cut(s) 40
Bbv12I GWGCWC 1 cut(s) 40
BbvI GCAGC 8 cut(s) 538, 598, 599, 994, 1150, 1585, 1612, 1669
BccI CCATC 3 cut(s) 710, 898, 1609
BceAI ACGGC 1 cut(s) 464
BciT130I CCWGG 4 cut(s) 513, 968, 1387, 1724
BcnI CCSGG 3 cut(s) 464, 1664, 1665
BcoDI GTCTC 4 cut(s) 871, 949, 965, 1384
BfaI CTAG 5 cut(s) 440, 812, 852, 1274, 1707
BfmI CTRYAG 3 cut(s) 584, 1164, 1571
BfoI RGCGCY 2 cut(s) 932, 1535
BfuAI ACCTGC 1 cut(s) 586
BglI GCCNNNNNGGC 1 cut(s) 609
BisI GCNGC 9 cut(s) 552, 587, 613, 932, 983, 1164, 1574, 1601, 1658
BlsI GCNGC 9 cut(s) 553, 588, 614, 933, 984, 1165, 1575, 1602, 1659
Bme1390I CCNGG 7 cut(s) 464, 513, 968, 1387, 1664, 1665, 1724
BmeRI GACNNNNNGTC 1 cut(s) 484
BmeT110I CYCGRG 1 cut(s) 1663
BmgBI CACGTC 1 cut(s) 188
BmiI GGNNCC 3 cut(s) 1384, 1482, 1620
BmrFI CCNGG 7 cut(s) 464, 513, 968, 1387, 1664, 1665, 1724
BmsI GCATC 2 cut(s) 748, 1644
BmtI GCTAGC 1 cut(s) 1277
BoxI GACNNNNGTC 1 cut(s) 387
BpmI CTGGAG 4 cut(s) 473, 999, 1251, 1388
Bpu10I CCTNAGC 1 cut(s) 661
Bpu14I TTCGAA 2 cut(s) 157, 1673
BpuEI CTTGAG 1 cut(s) 370
BpuMI CCSGG 3 cut(s) 464, 1664, 1665
BsaJI CCNNGG 8 cut(s) 54, 105, 191, 1188, 1317, 1662, 1663, 1723
BsaWI WCCGGW 1 cut(s) 938
BsaXI ACNNNNNCTCC 2 cut(s) 342, 372
Bse1I ACTGG 3 cut(s) 120, 963, 1284
Bse21I CCTNAGG 2 cut(s) 621, 1080
Bse3DI GCAATG 2 cut(s) 1189, 1497
BseBI CCWGG 4 cut(s) 513, 968, 1387, 1724
BseDI CCNNGG 8 cut(s) 54, 105, 191, 1188, 1317, 1662, 1663, 1723
BseGI GGATG 2 cut(s) 890, 1468
BseMI GCAATG 2 cut(s) 1189, 1497
BseMII CTCAG 3 cut(s) 356, 612, 1001
BseNI ACTGG 3 cut(s) 120, 963, 1284
BseRI GAGGAG 5 cut(s) 926, 996, 999, 1002, 1061
BseSI GKGCMC 3 cut(s) 8, 137, 1317
BseXI GCAGC 8 cut(s) 538, 598, 599, 994, 1150, 1585, 1612, 1669
BseYI CCCAGC 2 cut(s) 1253, 1266
BsgI GTGCAG 2 cut(s) 564, 1496
BshFI GGCC 6 cut(s) 29, 63, 116, 227, 795, 803
BshNI GGYRCC 2 cut(s) 1382, 1618
BsiHKAI GWGCWC 1 cut(s) 40
BsiHKCI CYCGRG 1 cut(s) 1663
BsiSI CCGG 3 cut(s) 463, 939, 1664
BslFI GGGAC 2 cut(s) 375, 1270
BsmAI GTCTC 4 cut(s) 871, 949, 965, 1384
BsmFI GGGAC 2 cut(s) 375, 1270
BsnI GGCC 6 cut(s) 29, 63, 116, 227, 795, 803
BsoBI CYCGRG 1 cut(s) 1663
Bsp119I TTCGAA 2 cut(s) 157, 1673
Bsp1286I GDGCHC 4 cut(s) 8, 40, 137, 1317
Bsp143I GATC 7 cut(s) 307, 515, 844, 1129, 1246, 1480, 1687
Bsp19I CCATGG 1 cut(s) 1317
BspACI CCGC 2 cut(s) 601, 932
BspANI GGCC 6 cut(s) 29, 63, 116, 227, 795, 803
BspCNI CTCAG 3 cut(s) 355, 613, 1000
BspLI GGNNCC 3 cut(s) 1384, 1482, 1620
BspMAI CTGCAG 3 cut(s) 588, 1168, 1575
BspMI ACCTGC 1 cut(s) 586
BspOI GCTAGC 1 cut(s) 1277
BspPI GGATC 6 cut(s) 302, 523, 852, 1475, 1488, 1682
BspQI GCTCTTC 1 cut(s) 318
BspT104I TTCGAA 2 cut(s) 157, 1673
BspT107I GGYRCC 2 cut(s) 1382, 1618
BsrDI GCAATG 2 cut(s) 1189, 1497
BsrI ACTGG 3 cut(s) 120, 963, 1284
BssECI CCNNGG 8 cut(s) 54, 105, 191, 1188, 1317, 1662, 1663, 1723
BssMI GATC 7 cut(s) 307, 515, 844, 1129, 1246, 1480, 1687
BssT1I CCWWGG 3 cut(s) 54, 1188, 1317
Bst2UI CCWGG 4 cut(s) 513, 968, 1387, 1724
Bst4CI ACNGT 3 cut(s) 109, 212, 1427
Bst6I CTCTTC 3 cut(s) 318, 1056, 1080
BstAPI GCANNNNNTGC 1 cut(s) 1570
BstBI TTCGAA 2 cut(s) 157, 1673
BstC8I GCNNGC 5 cut(s) 617, 793, 1275, 1414, 1439
BstDEI CTNAG 6 cut(s) 342, 621, 661, 987, 1080, 1142
BstDSI CCRYGG 3 cut(s) 105, 191, 1317
BstEII GGTNACC 1 cut(s) 1282
BstENI CCTNNNNNAGG 1 cut(s) 68
BstF5I GGATG 2 cut(s) 890, 1468
BstH2I RGCGCY 2 cut(s) 932, 1535
BstHHI GCGC 2 cut(s) 931, 1534
BstKTI GATC 7 cut(s) 310, 518, 847, 1132, 1249, 1483, 1690
BstMAI GTCTC 4 cut(s) 871, 949, 965, 1384
BstMBI GATC 7 cut(s) 307, 515, 844, 1129, 1246, 1480, 1687
BstMWI GCNNNNNNNGC 8 cut(s) 35, 203, 568, 609, 767, 1531, 1538, 1570
BstNI CCWGG 4 cut(s) 513, 968, 1387, 1724
BstNSI RCATGY 1 cut(s) 736
BstPAI GACNNNNGTC 1 cut(s) 387
BstPI GGTNACC 1 cut(s) 1282
BstSCI CCNGG 7 cut(s) 462, 511, 966, 1385, 1662, 1663, 1722
BstSFI CTRYAG 3 cut(s) 584, 1164, 1571
BstSLI GKGCMC 3 cut(s) 8, 137, 1317
BstV1I GCAGC 8 cut(s) 538, 598, 599, 994, 1150, 1585, 1612, 1669
BstX2I RGATCY 3 cut(s) 844, 1480, 1687
BstYI RGATCY 3 cut(s) 844, 1480, 1687
Bsu36I CCTNAGG 2 cut(s) 621, 1080
BsuRI GGCC 6 cut(s) 29, 63, 116, 227, 795, 803
BtgI CCRYGG 3 cut(s) 105, 191, 1317
BtrI CACGTC 1 cut(s) 188
BtsCI GGATG 2 cut(s) 890, 1468
BtsI GCAGTG 1 cut(s) 581
BtsIMutI CAGTG 3 cut(s) 581, 1125, 1277
BveI ACCTGC 1 cut(s) 586
Cac8I GCNNGC 5 cut(s) 617, 793, 1275, 1414, 1439
CaiI CAGNNNCTG 1 cut(s) 1022
CfoI GCGC 2 cut(s) 931, 1534
Cfr9I CCCGGG 1 cut(s) 1663
Csp6I GTAC 1 cut(s) 527
CviAII CATG 7 cut(s) 152, 218, 607, 733, 755, 1318, 1609
CviQI GTAC 1 cut(s) 527
DdeI CTNAG 6 cut(s) 342, 621, 661, 987, 1080, 1142
DpnI GATC 7 cut(s) 309, 517, 846, 1131, 1248, 1482, 1689
DpnII GATC 7 cut(s) 307, 515, 844, 1129, 1246, 1480, 1687
DraI TTTAAA 3 cut(s) 376, 675, 688
DriI GACNNNNNGTC 1 cut(s) 484
EaeI YGGCCR 2 cut(s) 225, 793
Eam1104I CTCTTC 3 cut(s) 318, 1056, 1080
Eam1105I GACNNNNNGTC 1 cut(s) 484
EarI CTCTTC 3 cut(s) 318, 1056, 1080
Ecl136II GAGCTC 1 cut(s) 38
Eco130I CCWWGG 3 cut(s) 54, 1188, 1317
Eco147I AGGCCT 1 cut(s) 29
Eco24I GRGCYC 1 cut(s) 40
Eco32I GATATC 1 cut(s) 1113
Eco53kI GAGCTC 1 cut(s) 38
Eco57I CTGAAG 4 cut(s) 62, 491, 1017, 1245
Eco81I CCTNAGG 2 cut(s) 621, 1080
Eco88I CYCGRG 1 cut(s) 1663
Eco91I GGTNACC 1 cut(s) 1282
EcoICRI GAGCTC 1 cut(s) 38
EcoNI CCTNNNNNAGG 1 cut(s) 68
EcoO65I GGTNACC 1 cut(s) 1282
EcoRI GAATTC 1 cut(s) 83
EcoRII CCWGG 4 cut(s) 511, 966, 1385, 1722
EcoRV GATATC 1 cut(s) 1113
EcoT14I CCWWGG 3 cut(s) 54, 1188, 1317
EcoT38I GRGCYC 1 cut(s) 40
ErhI CCWWGG 3 cut(s) 54, 1188, 1317
FaeI CATG 7 cut(s) 155, 221, 610, 736, 758, 1321, 1612
FaqI GGGAC 2 cut(s) 375, 1270
FatI CATG 7 cut(s) 151, 217, 606, 732, 754, 1317, 1608
FauNDI CATATG 1 cut(s) 427
Fnu4HI GCNGC 9 cut(s) 552, 587, 613, 932, 983, 1164, 1574, 1601, 1658
FokI GGATG 2 cut(s) 877, 1455
FriOI GRGCYC 1 cut(s) 40
Fsp4HI GCNGC 9 cut(s) 552, 587, 613, 932, 983, 1164, 1574, 1601, 1658
FspBI CTAG 5 cut(s) 440, 812, 852, 1274, 1707
GlaI GCGC 2 cut(s) 930, 1533
GluI GCNGC 9 cut(s) 552, 587, 613, 932, 983, 1164, 1574, 1601, 1658
GsaI CCCAGC 2 cut(s) 1257, 1270
GsuI CTGGAG 4 cut(s) 473, 999, 1251, 1388
HaeII RGCGCY 2 cut(s) 932, 1535
HaeIII GGCC 6 cut(s) 29, 63, 116, 227, 795, 803
HapII CCGG 3 cut(s) 463, 939, 1664
HhaI GCGC 2 cut(s) 931, 1534
Hin1II CATG 7 cut(s) 155, 221, 610, 736, 758, 1321, 1612
Hin6I GCGC 2 cut(s) 929, 1532
HinP1I GCGC 2 cut(s) 929, 1532
HincII GTYRAC 3 cut(s) 76, 730, 949
HindII GTYRAC 3 cut(s) 76, 730, 949
HinfI GANTC 4 cut(s) 47, 244, 383, 485
HpaI GTTAAC 1 cut(s) 949
HpaII CCGG 3 cut(s) 463, 939, 1664
HphI GGTGA 5 cut(s) 121, 317, 501, 1294, 1616
Hpy166II GTNNAC 4 cut(s) 76, 191, 730, 949
Hpy188I TCNGA 7 cut(s) 42, 141, 249, 345, 471, 490, 990
Hpy188III TCNNGA 6 cut(s) 13, 440, 750, 1016, 1230, 1405
Hpy8I GTNNAC 4 cut(s) 76, 191, 730, 949
Hpy99I CGWCG 1 cut(s) 713
HpyAV CCTTC 5 cut(s) 19, 37, 106, 136, 1373
HpyCH4III ACNGT 3 cut(s) 109, 212, 1427
HpyCH4IV ACGT 4 cut(s) 8, 126, 187, 1521
HpyF10VI GCNNNNNNNGC 8 cut(s) 35, 203, 568, 609, 767, 1531, 1538, 1570
HpyF3I CTNAG 6 cut(s) 342, 621, 661, 987, 1080, 1142
HpySE526I ACGT 4 cut(s) 8, 126, 187, 1521
Hsp92II CATG 7 cut(s) 155, 221, 610, 736, 758, 1321, 1612
HspAI GCGC 2 cut(s) 929, 1532
KspAI GTTAAC 1 cut(s) 949
Kzo9I GATC 7 cut(s) 307, 515, 844, 1129, 1246, 1480, 1687
LguI GCTCTTC 1 cut(s) 318
LmnI GCTCC 7 cut(s) 35, 249, 490, 568, 1232, 1270, 1407
Lsp1109I GCAGC 8 cut(s) 538, 598, 599, 994, 1150, 1585, 1612, 1669
LweI GCATC 2 cut(s) 748, 1644
MaeI CTAG 5 cut(s) 440, 812, 852, 1274, 1707
MaeII ACGT 4 cut(s) 8, 126, 187, 1521
MaeIII GTNAC 3 cut(s) 122, 181, 1282
MalI GATC 7 cut(s) 309, 517, 846, 1131, 1248, 1482, 1689
MboI GATC 7 cut(s) 307, 515, 844, 1129, 1246, 1480, 1687
MflI RGATCY 3 cut(s) 844, 1480, 1687
MhlI GDGCHC 4 cut(s) 8, 40, 137, 1317
MlsI TGGCCA 2 cut(s) 227, 795
MluCI AATT 6 cut(s) 83, 363, 370, 640, 714, 1170
MluNI TGGCCA 2 cut(s) 227, 795
MlyI GAGTC 4 cut(s) 41, 238, 377, 494
MmeI TCCRAC 4 cut(s) 468, 546, 893, 1521
Mox20I TGGCCA 2 cut(s) 227, 795
MroXI GAANNNNTTC 1 cut(s) 327
MscI TGGCCA 2 cut(s) 227, 795
MseI TTAA 6 cut(s) 375, 636, 674, 687, 765, 948
MslI CAYNNNNRTG 1 cut(s) 1613
Msp20I TGGCCA 2 cut(s) 227, 795
MspI CCGG 3 cut(s) 463, 939, 1664
MspR9I CCNGG 7 cut(s) 464, 513, 968, 1387, 1664, 1665, 1724
MvaI CCWGG 4 cut(s) 513, 968, 1387, 1724
MwoI GCNNNNNNNGC 8 cut(s) 35, 203, 568, 609, 767, 1531, 1538, 1570
NciI CCSGG 3 cut(s) 464, 1664, 1665
NcoI CCATGG 1 cut(s) 1317
NdeI CATATG 1 cut(s) 427
NdeII GATC 7 cut(s) 307, 515, 844, 1129, 1246, 1480, 1687
NheI GCTAGC 1 cut(s) 1273
NlaIII CATG 7 cut(s) 155, 221, 610, 736, 758, 1321, 1612
NlaIV GGNNCC 3 cut(s) 1384, 1482, 1620
NmuCI GTSAC 3 cut(s) 122, 181, 1282
NspI RCATGY 1 cut(s) 736
NspV TTCGAA 2 cut(s) 157, 1673
PceI AGGCCT 1 cut(s) 29
PciI ACATGT 1 cut(s) 732
PciSI GCTCTTC 1 cut(s) 318
PcsI WCGNNNNNNNCGW 1 cut(s) 154
PdmI GAANNNNTTC 1 cut(s) 327
PkrI GCNGC 9 cut(s) 553, 588, 614, 933, 984, 1165, 1575, 1602, 1659
PleI GAGTC 4 cut(s) 41, 238, 377, 493
PpsI GAGTC 4 cut(s) 41, 238, 377, 493
PscI ACATGT 1 cut(s) 732
PshAI GACNNNNGTC 1 cut(s) 387
PsiI TTATAA 2 cut(s) 719, 783
Psp124BI GAGCTC 1 cut(s) 40
Psp6I CCWGG 4 cut(s) 511, 966, 1385, 1722
PspEI GGTNACC 1 cut(s) 1282
PspFI CCCAGC 2 cut(s) 1253, 1266
PspGI CCWGG 4 cut(s) 511, 966, 1385, 1722
PspN4I GGNNCC 3 cut(s) 1384, 1482, 1620
PstI CTGCAG 3 cut(s) 588, 1168, 1575
PstNI CAGNNNCTG 1 cut(s) 1022
PsuI RGATCY 3 cut(s) 844, 1480, 1687
RsaI GTAC 1 cut(s) 528
RsaNI GTAC 1 cut(s) 527
RseI CAYNNNNRTG 1 cut(s) 1613
SacI GAGCTC 1 cut(s) 40
SapI GCTCTTC 1 cut(s) 318
SaqAI TTAA 6 cut(s) 375, 636, 674, 687, 765, 948
SatI GCNGC 9 cut(s) 552, 587, 613, 932, 983, 1164, 1574, 1601, 1658
Sau3AI GATC 7 cut(s) 307, 515, 844, 1129, 1246, 1480, 1687
SchI GAGTC 4 cut(s) 41, 238, 377, 494
ScrFI CCNGG 7 cut(s) 464, 513, 968, 1387, 1664, 1665, 1724
SduI GDGCHC 4 cut(s) 8, 40, 137, 1317
SfaNI GCATC 2 cut(s) 748, 1644
SfcI CTRYAG 3 cut(s) 584, 1164, 1571
SfuI TTCGAA 2 cut(s) 157, 1673
SmaI CCCGGG 1 cut(s) 1665
SmiMI CAYNNNNRTG 1 cut(s) 1613
SmlI CTYRAG 1 cut(s) 385
SmoI CTYRAG 1 cut(s) 385
Sse9I AATT 6 cut(s) 83, 363, 370, 640, 714, 1170
SseBI AGGCCT 1 cut(s) 29
SsiI CCGC 2 cut(s) 601, 932
SspI AATATT 1 cut(s) 830
SspMI CTAG 5 cut(s) 440, 812, 852, 1274, 1707
SstI GAGCTC 1 cut(s) 40
StuI AGGCCT 1 cut(s) 29
StyD4I CCNGG 7 cut(s) 462, 511, 966, 1385, 1662, 1663, 1722
StyI CCWWGG 3 cut(s) 54, 1188, 1317
TaaI ACNGT 3 cut(s) 109, 212, 1427
TaiI ACGT 4 cut(s) 11, 129, 190, 1524
TaqI TCGA 3 cut(s) 157, 483, 1673
TasI AATT 6 cut(s) 83, 363, 370, 640, 714, 1170
TauI GCSGC 1 cut(s) 934
Tru1I TTAA 6 cut(s) 375, 636, 674, 687, 765, 948
Tru9I TTAA 6 cut(s) 375, 636, 674, 687, 765, 948
TscAI CASTG 3 cut(s) 588, 1132, 1284
TseFI GTSAC 3 cut(s) 122, 181, 1282
TseI GCWGC 8 cut(s) 551, 586, 612, 982, 1163, 1573, 1600, 1657
Tsp45I GTSAC 3 cut(s) 122, 181, 1282
TspDTI ATGAA 5 cut(s) 206, 275, 840, 1386, 1392
TspGWI ACGGA 3 cut(s) 726, 1070, 1133
TspMI CCCGGG 1 cut(s) 1663
TspRI CASTG 3 cut(s) 588, 1132, 1284
XagI CCTNNNNNAGG 1 cut(s) 68
XapI RAATTY 2 cut(s) 83, 363
XbaI TCTAGA 1 cut(s) 439
XceI RCATGY 1 cut(s) 736
XcmI CCANNNNNNNNNTGG 1 cut(s) 1525
XmaI CCCGGG 1 cut(s) 1663
XmnI GAANNNNTTC 1 cut(s) 327
XspI CTAG 5 cut(s) 440, 812, 852, 1274, 1707
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.