MD16G1249100.v1.1

clathrin assembly

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0012345
Physical Location & Seq
Forward (+)
27799588 .. 27803978
4391 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1249100.v1.1.491

Sequence Viewer

Length: 1752 bp
ATGGGTACTTTTCAGAGCTTTAGGAAGGCCTATGGAGCTCTGAAGGACTCTACAAAGGTTGGCCTCATCAAGGTCAACAGCGAATTCAAGGATTTGGATATTGCCACTGTGAAGGCCACCAGTCACGTAGAGTACCCTCCAAAGGAACGTCACGTTCGAAAGATTTTCTCCGCGACATCAGTGACACGTCCACGTGCAGATGTAGCATACTGCATTCATGCGCTGGCCAAGAGATTGTCCAAGACACGGAGTTGGATTGTTGCCATAAAGACGTTGATAGTTATTCATAGAACATTGAGAGAGGGTGATCCTACCTTCAGAGAGGAGCTTTTGAACTATTCGCAGAGAGGACACATTCTCCAAATTTCCAATTTTAAAGATGACTCAAGTCCCCTTGCTTGGGATTGCTCCGCTTGGGTGAGGACATATGCACTCTTTTTAGAAGAACGGCTGGAGTGTTTTCGAGTTTTGAAATATGACATTGAGGCAGAGCGTTTGACAAAAACGTCGCCAGGATCAACCAAGGTCCATAGTAGAACACGAACGCTGGGTGCTGATGAGCTGTTGGAGCAGCTACCTGCACTGCAGCAACTTCTTTTCCGCCTTATGGGTTGCCAGCCGGAGGGGACAGCTTATAACAATTACCTCATACAATATGCCTTGGCTCTGATATTGAAAGAGAGCTTTAAAATATACTGTGCCATCAATGACGGAATTATAAATCTCGTTGACATGTTCTTTGATATGTCAAGATACGATGCAGTTAAAGCCCTCAATATTTACAAAAGAGCTGGCCAACAGCTGCAGGCTGAAGGGCTTGCTGATTTTTATGAATACTGCAAGGGTTTGGATCTTGCTAGAACCTTTCAGTTTCCAACATTGAGACAGCCCCCACCGTCATTTCTTGCAACAATGGAGGAGTATATAAAGGAGGCGCCTCAGTCAGGTTCCGTTAACAGGAGACTGGAATACCAGGTGACAGACGAGCAGCCTCAGAGACCCGAAGAATCTCCTCCTCCAGAGCCTGAAAAACAAGATGAAAAAGTTGAGGAGCCACTGCCGAAAACAGAGGAAGAACCCCAACCCAAGGAAGAGGAAGTCGAACCTCCTCCTTTGATATCAACTGATGACACTGATCTGCTTGGTTTAAGGGAAATTAATCCAAAAGCTGCAGAAATCGAAGAAAGCAATGCCTTAGCTCTTGCCATTGTTCCACAGGGCAGTGAACAAAAACCTGGAGCGTGTTTCAATGATTTTGCTGGGACTTCCGGTTGGGAGCTAGCACTGGTAACCACACCAAGCAATCATACCAGCCAAGTGCCTGTAGACAGAAAGTTGGCTGGTGGCTTTGACAAGCTATTACTTGATAGTTTGTATGAAGATGAAGGTGCCAGGAGACAGTTACAACTCCAGAATGCAGGGTATGGTTATGGCGCGACGAGCTTGCAAAATCCATTTGAACAACAAACACAACAGCCCGTACACGACCCATTTGCAATGTCCAACAGCGTAGCACCTCCGACAAATGTGCAAATGGCGCTCATGGCGCAGCAACAACACCAGCACCAAGAAATCATGCAGCAGCAACAACAACAATACCAACAACAGCACAACATGATGGTGGTACCTCACCCGTATTATTCTCAATATTCTCAACCAATGCAGCCCGCGAGCTCTTCAAACCCGTTCGGAGATCCATTCAGCTTCCCTCCGAGTACAACGTCACATCAGGGAAACCAAAACCTAATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANTH

Protein Analysis

584

Amino Acids

66.01

Weight (kDa)

5.41

Isoelectric Point (pI)

59.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANTH PF07651 31 - 311 9.1e-90 ANTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012345)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25940 AT5G57200
fragaria_vesca FvH4_4g07320
malus_domestica MD13G1242200.v1.1 MD16G1249100.v1.1
prunus_persica Prupe.1G075800_v2.0.a1 Prupe.1G076000_v2.0.a1
pyrus_communis pycom13g21390 pycom16g20850
rosa_chinensis RchiOBHm_Chr4g0399681
rosa_laevigata RLG00000009247
rosa_multiflora Rmu_co8405013.1_g000001
rosa_roxburghii Rroxscaffold_5G00344590
rosa_rugosa Rorug04G0018100
rosa_samantha Rh4AG095900 Rh4BG093400 Rh4CG104500 Rh4DG088500
rosa_wichuraiana Rw4G007900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 636, 719
AasI GACNNNNNNGTC 1 cut(s) 505
Acc36I ACCTGC 1 cut(s) 586
Acc65I GGTACC 1 cut(s) 1624
AccB1I GGYRCC 3 cut(s) 934, 1388, 1624
AccI GTMKAC 1 cut(s) 1326
AccII CGCG 3 cut(s) 173, 1436, 1670
AciI CCGC 4 cut(s) 171, 411, 601, 1668
AclWI GGATC 4 cut(s) 302, 523, 858, 1688
AcoI YGGCCR 2 cut(s) 225, 793
AcsI RAATTY 2 cut(s) 83, 363
AcuI CTGAAG 3 cut(s) 62, 301, 831
AcvI CACGTG 1 cut(s) 194
AcyI GRCGYC 1 cut(s) 935
AfaI GTAC 5 cut(s) 7, 134, 1482, 1626, 1717
AflIII ACRYGT 2 cut(s) 185, 732
AgsI TTSAA 7 cut(s) 88, 334, 472, 676, 1249, 1460, 1680
AjiI CACGTC 1 cut(s) 188
AjnI CCWGG 4 cut(s) 511, 972, 1234, 1391
Alw21I GWGCWC 2 cut(s) 40, 1676
Alw26I GTCTC 4 cut(s) 877, 955, 991, 1390
AlwI GGATC 4 cut(s) 302, 523, 858, 1688
AlwNI CAGNNNCTG 1 cut(s) 1025
AoxI GGCC 5 cut(s) 27, 61, 114, 225, 793
ApeKI GCWGC 9 cut(s) 571, 586, 802, 988, 1169, 1549, 1579, 1582, 1663
ApoI RAATTY 2 cut(s) 83, 363
ArsI GACNNNNNNTTYG 2 cut(s) 722, 754
AseI ATTAAT 1 cut(s) 1158
Asp718I GGTACC 1 cut(s) 1624
AspLEI GCGC 5 cut(s) 223, 937, 1436, 1540, 1549
AspS9I GGNCC 1 cut(s) 526
AsuHPI GGTGA 4 cut(s) 317, 430, 988, 1622
AsuII TTCGAA 1 cut(s) 157
AsuNHI GCTAGC 1 cut(s) 1279
AvaII GGWCC 1 cut(s) 526
BalI TGGCCA 2 cut(s) 227, 795
BanI GGYRCC 3 cut(s) 934, 1388, 1624
BanII GRGCYC 2 cut(s) 40, 1676
BbrPI CACGTG 1 cut(s) 194
Bbv12I GWGCWC 2 cut(s) 40, 1676
BbvI GCAGC 9 cut(s) 583, 598, 789, 1000, 1156, 1561, 1591, 1594, 1675
BccI CCATC 2 cut(s) 710, 1612
BceAI ACGGC 1 cut(s) 464
BcgI CGANNNNNNTGC 6 cut(s) 1426, 1460, 1475, 1509, 1510, 1544
BciT130I CCWGG 4 cut(s) 513, 974, 1236, 1393
BcoDI GTCTC 4 cut(s) 877, 955, 991, 1390
BfaI CTAG 2 cut(s) 858, 1280
BfmI CTRYAG 4 cut(s) 584, 803, 1170, 1323
BfoI RGCGCY 2 cut(s) 938, 1541
BfuAI ACCTGC 1 cut(s) 586
BisI GCNGC 9 cut(s) 572, 587, 803, 989, 1170, 1550, 1580, 1583, 1664
BlsI GCNGC 9 cut(s) 573, 588, 804, 990, 1171, 1551, 1581, 1584, 1665
Bme1390I CCNGG 4 cut(s) 513, 974, 1236, 1393
Bme18I GGWCC 1 cut(s) 526
BmgBI CACGTC 1 cut(s) 188
BmgT120I GGNCC 1 cut(s) 526
BmiI GGNNCC 5 cut(s) 936, 949, 1053, 1390, 1626
BmrFI CCNGG 4 cut(s) 513, 974, 1236, 1393
BmsI GCATC 1 cut(s) 748
BmtI GCTAGC 1 cut(s) 1283
BoxI GACNNNNGTC 1 cut(s) 387
BpmI CTGGAG 4 cut(s) 473, 1002, 1257, 1394
Bpu10I CCTNAGC 1 cut(s) 1195
Bpu14I TTCGAA 1 cut(s) 157
BpuEI CTTGAG 1 cut(s) 370
BsaAI YACGTR 2 cut(s) 127, 194
BsaHI GRCGYC 1 cut(s) 935
BsaI GGTCTC 1 cut(s) 991
BsaJI CCNNGG 3 cut(s) 522, 660, 1086
BsaWI WCCGGW 1 cut(s) 1268
BsaXI ACNNNNNCTCC 2 cut(s) 342, 372
Bse1I ACTGG 3 cut(s) 120, 969, 1290
Bse3DI GCAATG 2 cut(s) 1195, 1503
BseBI CCWGG 4 cut(s) 513, 974, 1236, 1393
BseDI CCNNGG 3 cut(s) 522, 660, 1086
BseMI GCAATG 2 cut(s) 1195, 1503
BseMII CTCAG 2 cut(s) 953, 1007
BseNI ACTGG 3 cut(s) 120, 969, 1290
BseRI GAGGAG 6 cut(s) 338, 932, 1002, 1005, 1064, 1098
BseXI GCAGC 9 cut(s) 583, 598, 789, 1000, 1156, 1561, 1591, 1594, 1675
BseYI CCCAGC 2 cut(s) 547, 1259
BsgI GTGCAG 2 cut(s) 216, 564
Bsh1236I CGCG 3 cut(s) 173, 1436, 1670
BshFI GGCC 5 cut(s) 29, 63, 116, 227, 795
BshNI GGYRCC 3 cut(s) 934, 1388, 1624
BsiHKAI GWGCWC 2 cut(s) 40, 1676
BsiSI CCGG 2 cut(s) 620, 1269
BslFI GGGAC 3 cut(s) 375, 640, 1276
BsmAI GTCTC 4 cut(s) 877, 955, 991, 1390
BsmFI GGGAC 3 cut(s) 375, 640, 1276
BsmI GAATGC 2 cut(s) 213, 1420
BsnI GGCC 5 cut(s) 29, 63, 116, 227, 795
Bso31I GGTCTC 1 cut(s) 991
Bsp119I TTCGAA 1 cut(s) 157
Bsp1286I GDGCHC 2 cut(s) 40, 1676
Bsp143I GATC 5 cut(s) 307, 515, 850, 1135, 1693
BspACI CCGC 4 cut(s) 171, 411, 601, 1668
BspANI GGCC 5 cut(s) 29, 63, 116, 227, 795
BspCNI CTCAG 2 cut(s) 952, 1006
BspFNI CGCG 3 cut(s) 173, 1436, 1670
BspLI GGNNCC 5 cut(s) 936, 949, 1053, 1390, 1626
BspMAI CTGCAG 3 cut(s) 588, 807, 1174
BspMI ACCTGC 1 cut(s) 586
BspOI GCTAGC 1 cut(s) 1283
BspPI GGATC 4 cut(s) 302, 523, 858, 1688
BspQI GCTCTTC 1 cut(s) 1681
BspT104I TTCGAA 1 cut(s) 157
BspT107I GGYRCC 3 cut(s) 934, 1388, 1624
BspTNI GGTCTC 1 cut(s) 991
BsrDI GCAATG 2 cut(s) 1195, 1503
BsrI ACTGG 3 cut(s) 120, 969, 1290
BssECI CCNNGG 3 cut(s) 522, 660, 1086
BssMI GATC 5 cut(s) 307, 515, 850, 1135, 1693
BssNI GRCGYC 1 cut(s) 935
BssT1I CCWWGG 3 cut(s) 522, 660, 1086
Bst2UI CCWGG 4 cut(s) 513, 974, 1236, 1393
Bst4CI ACNGT 4 cut(s) 109, 698, 897, 1401
Bst6I CTCTTC 2 cut(s) 1086, 1681
BstACI GRCGYC 1 cut(s) 935
BstBAI YACGTR 2 cut(s) 127, 194
BstBI TTCGAA 1 cut(s) 157
BstC8I GCNNGC 9 cut(s) 225, 617, 793, 807, 819, 1281, 1445, 1668, 1672
BstDEI CTNAG 3 cut(s) 939, 993, 1195
BstEII GGTNACC 1 cut(s) 1288
BstENI CCTNNNNNAGG 2 cut(s) 68, 942
BstFNI CGCG 3 cut(s) 173, 1436, 1670
BstH2I RGCGCY 2 cut(s) 938, 1541
BstHHI GCGC 5 cut(s) 223, 937, 1436, 1540, 1549
BstKTI GATC 5 cut(s) 310, 518, 853, 1138, 1696
BstMAI GTCTC 4 cut(s) 877, 955, 991, 1390
BstMBI GATC 5 cut(s) 307, 515, 850, 1135, 1693
BstMWI GCNNNNNNNGC 8 cut(s) 35, 203, 568, 767, 1440, 1537, 1544, 1546
BstNI CCWGG 4 cut(s) 513, 974, 1236, 1393
BstNSI RCATGY 1 cut(s) 736
BstPAI GACNNNNGTC 1 cut(s) 387
BstPI GGTNACC 1 cut(s) 1288
BstSCI CCNGG 4 cut(s) 511, 972, 1234, 1391
BstSFI CTRYAG 4 cut(s) 584, 803, 1170, 1323
BstUI CGCG 3 cut(s) 173, 1436, 1670
BstV1I GCAGC 9 cut(s) 583, 598, 789, 1000, 1156, 1561, 1591, 1594, 1675
BstX2I RGATCY 2 cut(s) 850, 1693
BstYI RGATCY 2 cut(s) 850, 1693
BsuRI GGCC 5 cut(s) 29, 63, 116, 227, 795
BtrI CACGTC 1 cut(s) 188
BtsI GCAGTG 3 cut(s) 581, 1055, 1228
BtsIMutI CAGTG 7 cut(s) 105, 186, 581, 1055, 1131, 1228, 1283
BveI ACCTGC 1 cut(s) 586
Cac8I GCNNGC 9 cut(s) 225, 617, 793, 807, 819, 1281, 1445, 1668, 1672
CaiI CAGNNNCTG 1 cut(s) 1025
CfoI GCGC 5 cut(s) 223, 937, 1436, 1540, 1549
Cfr13I GGNCC 1 cut(s) 526
CsiI ACCWGGT 1 cut(s) 972
Csp6I GTAC 5 cut(s) 6, 133, 1481, 1625, 1716
CviAII CATG 5 cut(s) 218, 733, 1543, 1576, 1615
CviQI GTAC 5 cut(s) 6, 133, 1481, 1625, 1716
DdeI CTNAG 3 cut(s) 939, 993, 1195
DinI GGCGCC 1 cut(s) 936
DpnI GATC 5 cut(s) 309, 517, 852, 1137, 1695
DpnII GATC 5 cut(s) 307, 515, 850, 1135, 1693
DraI TTTAAA 2 cut(s) 376, 688
DrdI GACNNNNNNGTC 1 cut(s) 505
DseDI GACNNNNNNGTC 1 cut(s) 505
EaeI YGGCCR 2 cut(s) 225, 793
Eam1104I CTCTTC 2 cut(s) 1086, 1681
EarI CTCTTC 2 cut(s) 1086, 1681
EciI GGCGGA 1 cut(s) 590
Ecl136II GAGCTC 2 cut(s) 38, 1674
Eco130I CCWWGG 3 cut(s) 522, 660, 1086
Eco147I AGGCCT 1 cut(s) 29
Eco24I GRGCYC 2 cut(s) 40, 1676
Eco31I GGTCTC 1 cut(s) 991
Eco32I GATATC 1 cut(s) 1119
Eco47I GGWCC 1 cut(s) 526
Eco53kI GAGCTC 2 cut(s) 38, 1674
Eco57I CTGAAG 3 cut(s) 62, 301, 831
Eco72I CACGTG 1 cut(s) 194
Eco91I GGTNACC 1 cut(s) 1288
EcoICRI GAGCTC 2 cut(s) 38, 1674
EcoNI CCTNNNNNAGG 2 cut(s) 68, 942
EcoO65I GGTNACC 1 cut(s) 1288
EcoRI GAATTC 1 cut(s) 83
EcoRII CCWGG 4 cut(s) 511, 972, 1234, 1391
EcoRV GATATC 1 cut(s) 1119
EcoT14I CCWWGG 3 cut(s) 522, 660, 1086
EcoT38I GRGCYC 2 cut(s) 40, 1676
EgeI GGCGCC 1 cut(s) 936
EheI GGCGCC 1 cut(s) 936
ErhI CCWWGG 3 cut(s) 522, 660, 1086
FaeI CATG 5 cut(s) 221, 736, 1546, 1579, 1618
FaqI GGGAC 3 cut(s) 375, 640, 1276
FatI CATG 5 cut(s) 217, 732, 1542, 1575, 1614
FauI CCCGC 1 cut(s) 1675
FauNDI CATATG 1 cut(s) 427
FblI GTMKAC 1 cut(s) 1326
Fnu4HI GCNGC 9 cut(s) 572, 587, 803, 989, 1170, 1550, 1580, 1583, 1664
FriOI GRGCYC 2 cut(s) 40, 1676
Fsp4HI GCNGC 9 cut(s) 572, 587, 803, 989, 1170, 1550, 1580, 1583, 1664
FspBI CTAG 2 cut(s) 858, 1280
GlaI GCGC 5 cut(s) 222, 936, 1435, 1539, 1548
GluI GCNGC 9 cut(s) 572, 587, 803, 989, 1170, 1550, 1580, 1583, 1664
GsaI CCCAGC 2 cut(s) 551, 1263
GsuI CTGGAG 4 cut(s) 473, 1002, 1257, 1394
HaeII RGCGCY 2 cut(s) 938, 1541
HaeIII GGCC 5 cut(s) 29, 63, 116, 227, 795
HapII CCGG 2 cut(s) 620, 1269
HhaI GCGC 5 cut(s) 223, 937, 1436, 1540, 1549
Hin1I GRCGYC 1 cut(s) 935
Hin1II CATG 5 cut(s) 221, 736, 1546, 1579, 1618
Hin6I GCGC 5 cut(s) 221, 935, 1434, 1538, 1547
HinP1I GCGC 5 cut(s) 221, 935, 1434, 1538, 1547
HincII GTYRAC 3 cut(s) 76, 730, 955
HindII GTYRAC 3 cut(s) 76, 730, 955
HinfI GANTC 3 cut(s) 47, 383, 1007
HpaI GTTAAC 1 cut(s) 955
HpaII CCGG 2 cut(s) 620, 1269
HphI GGTGA 4 cut(s) 317, 430, 988, 1622
Hpy166II GTNNAC 7 cut(s) 76, 191, 730, 955, 1226, 1327, 1483
Hpy188I TCNGA 8 cut(s) 15, 42, 320, 669, 996, 1521, 1691, 1713
Hpy188III TCNNGA 3 cut(s) 750, 1019, 1411
Hpy8I GTNNAC 7 cut(s) 76, 191, 730, 955, 1226, 1327, 1483
Hpy99I CGWCG 2 cut(s) 511, 1441
HpyAV CCTTC 6 cut(s) 19, 37, 106, 325, 806, 1379
HpyCH4III ACNGT 4 cut(s) 109, 698, 897, 1401
HpyCH4IV ACGT 8 cut(s) 126, 148, 153, 187, 193, 272, 506, 1721
HpyF10VI GCNNNNNNNGC 8 cut(s) 35, 203, 568, 767, 1440, 1537, 1544, 1546
HpyF3I CTNAG 3 cut(s) 939, 993, 1195
HpySE526I ACGT 8 cut(s) 126, 148, 153, 187, 193, 272, 506, 1721
Hsp92I GRCGYC 1 cut(s) 935
Hsp92II CATG 5 cut(s) 221, 736, 1546, 1579, 1618
HspAI GCGC 5 cut(s) 221, 935, 1434, 1538, 1547
KasI GGCGCC 1 cut(s) 934
KpnI GGTACC 1 cut(s) 1628
KspAI GTTAAC 1 cut(s) 955
Kzo9I GATC 5 cut(s) 307, 515, 850, 1135, 1693
LguI GCTCTTC 1 cut(s) 1681
LmnI GCTCC 7 cut(s) 35, 325, 413, 568, 1051, 1238, 1276
Lsp1109I GCAGC 9 cut(s) 583, 598, 789, 1000, 1156, 1561, 1591, 1594, 1675
LweI GCATC 1 cut(s) 748
MabI ACCWGGT 1 cut(s) 972
MaeI CTAG 2 cut(s) 858, 1280
MaeII ACGT 8 cut(s) 126, 148, 153, 187, 193, 272, 506, 1721
MaeIII GTNAC 7 cut(s) 122, 149, 181, 976, 1288, 1401, 1722
MalI GATC 5 cut(s) 309, 517, 852, 1137, 1695
MboI GATC 5 cut(s) 307, 515, 850, 1135, 1693
MboII GAAGA 7 cut(s) 455, 1016, 1085, 1103, 1193, 1391, 1668
MflI RGATCY 2 cut(s) 850, 1693
MhlI GDGCHC 2 cut(s) 40, 1676
MlsI TGGCCA 2 cut(s) 227, 795
MluCI AATT 6 cut(s) 83, 363, 370, 640, 714, 1155
MluNI TGGCCA 2 cut(s) 227, 795
Mly113I GGCGCC 1 cut(s) 935
MlyI GAGTC 2 cut(s) 41, 377
MmeI TCCRAC 5 cut(s) 233, 546, 899, 1527, 1544
Mox20I TGGCCA 2 cut(s) 227, 795
MscI TGGCCA 2 cut(s) 227, 795
MseI TTAA 6 cut(s) 375, 687, 765, 954, 1148, 1158
MslI CAYNNNNRTG 1 cut(s) 1619
Msp20I TGGCCA 2 cut(s) 227, 795
MspA1I CMGCKG 1 cut(s) 802
MspI CCGG 2 cut(s) 620, 1269
MspR9I CCNGG 4 cut(s) 513, 974, 1236, 1393
Mva1269I GAATGC 2 cut(s) 213, 1420
MvaI CCWGG 4 cut(s) 513, 974, 1236, 1393
MvnI CGCG 3 cut(s) 173, 1436, 1670
MwoI GCNNNNNNNGC 8 cut(s) 35, 203, 568, 767, 1440, 1537, 1544, 1546
NarI GGCGCC 1 cut(s) 935
NdeI CATATG 1 cut(s) 427
NdeII GATC 5 cut(s) 307, 515, 850, 1135, 1693
NheI GCTAGC 1 cut(s) 1279
NlaIII CATG 5 cut(s) 221, 736, 1546, 1579, 1618
NlaIV GGNNCC 5 cut(s) 936, 949, 1053, 1390, 1626
NmuCI GTSAC 5 cut(s) 122, 149, 181, 976, 1722
NspI RCATGY 1 cut(s) 736
NspV TTCGAA 1 cut(s) 157
PceI AGGCCT 1 cut(s) 29
PciI ACATGT 1 cut(s) 732
PciSI GCTCTTC 1 cut(s) 1681
PcsI WCGNNNNNNNCGW 1 cut(s) 154
PctI GAATGC 2 cut(s) 213, 1420
PfeI GAWTC 1 cut(s) 1007
PkrI GCNGC 9 cut(s) 573, 588, 804, 990, 1171, 1551, 1581, 1584, 1665
PleI GAGTC 2 cut(s) 41, 377
PluTI GGCGCC 1 cut(s) 938
PmaCI CACGTG 1 cut(s) 194
PmlI CACGTG 1 cut(s) 194
PpsI GAGTC 2 cut(s) 41, 377
Ppu21I YACGTR 2 cut(s) 127, 194
PscI ACATGT 1 cut(s) 732
PshAI GACNNNNGTC 1 cut(s) 387
PshBI ATTAAT 1 cut(s) 1158
PsiI TTATAA 2 cut(s) 636, 719
Psp124BI GAGCTC 2 cut(s) 40, 1676
Psp6I CCWGG 4 cut(s) 511, 972, 1234, 1391
PspCI CACGTG 1 cut(s) 194
PspEI GGTNACC 1 cut(s) 1288
PspFI CCCAGC 2 cut(s) 547, 1259
PspGI CCWGG 4 cut(s) 511, 972, 1234, 1391
PspN4I GGNNCC 5 cut(s) 936, 949, 1053, 1390, 1626
PspPI GGNCC 1 cut(s) 526
PstI CTGCAG 3 cut(s) 588, 807, 1174
PstNI CAGNNNCTG 1 cut(s) 1025
PsuI RGATCY 2 cut(s) 850, 1693
PvuII CAGCTG 1 cut(s) 802
RsaI GTAC 5 cut(s) 7, 134, 1482, 1626, 1717
RsaNI GTAC 5 cut(s) 6, 133, 1481, 1625, 1716
RseI CAYNNNNRTG 1 cut(s) 1619
SacI GAGCTC 2 cut(s) 40, 1676
SapI GCTCTTC 1 cut(s) 1681
SaqAI TTAA 6 cut(s) 375, 687, 765, 954, 1148, 1158
SatI GCNGC 9 cut(s) 572, 587, 803, 989, 1170, 1550, 1580, 1583, 1664
Sau3AI GATC 5 cut(s) 307, 515, 850, 1135, 1693
Sau96I GGNCC 1 cut(s) 526
SchI GAGTC 2 cut(s) 41, 377
ScrFI CCNGG 4 cut(s) 513, 974, 1236, 1393
SduI GDGCHC 2 cut(s) 40, 1676
SexAI ACCWGGT 1 cut(s) 972
SfaNI GCATC 1 cut(s) 748
SfcI CTRYAG 4 cut(s) 584, 803, 1170, 1323
SfoI GGCGCC 1 cut(s) 936
SfuI TTCGAA 1 cut(s) 157
SinI GGWCC 1 cut(s) 526
SmiMI CAYNNNNRTG 1 cut(s) 1619
SmlI CTYRAG 1 cut(s) 385
SmoI CTYRAG 1 cut(s) 385
Sse9I AATT 6 cut(s) 83, 363, 370, 640, 714, 1155
SseBI AGGCCT 1 cut(s) 29
SsiI CCGC 4 cut(s) 171, 411, 601, 1668
SspDI GGCGCC 1 cut(s) 934
SspI AATATT 2 cut(s) 778, 1649
SspMI CTAG 2 cut(s) 858, 1280
SstI GAGCTC 2 cut(s) 40, 1676
StuI AGGCCT 1 cut(s) 29
StyD4I CCNGG 4 cut(s) 511, 972, 1234, 1391
StyI CCWWGG 3 cut(s) 522, 660, 1086
TaaI ACNGT 4 cut(s) 109, 698, 897, 1401
TaiI ACGT 8 cut(s) 129, 151, 156, 190, 196, 275, 509, 1724
TaqI TCGA 4 cut(s) 157, 463, 1101, 1179
TasI AATT 6 cut(s) 83, 363, 370, 640, 714, 1155
TatI WGTACW 1 cut(s) 1715
TfiI GAWTC 1 cut(s) 1007
Tru1I TTAA 6 cut(s) 375, 687, 765, 954, 1148, 1158
Tru9I TTAA 6 cut(s) 375, 687, 765, 954, 1148, 1158
TscAI CASTG 7 cut(s) 112, 186, 588, 1062, 1138, 1228, 1290
TseFI GTSAC 5 cut(s) 122, 149, 181, 976, 1722
TseI GCWGC 9 cut(s) 571, 586, 802, 988, 1169, 1549, 1579, 1582, 1663
Tsp45I GTSAC 5 cut(s) 122, 149, 181, 976, 1722
TspDTI ATGAA 6 cut(s) 206, 275, 846, 1053, 1392, 1398
TspGWI ACGGA 3 cut(s) 262, 726, 940
TspRI CASTG 7 cut(s) 112, 186, 588, 1062, 1138, 1228, 1290
VpaK11BI GGWCC 1 cut(s) 526
VspI ATTAAT 1 cut(s) 1158
XagI CCTNNNNNAGG 2 cut(s) 68, 942
XapI RAATTY 2 cut(s) 83, 363
XceI RCATGY 1 cut(s) 736
XmiI GTMKAC 1 cut(s) 1326
XspI CTAG 2 cut(s) 858, 1280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.