Rh4BG093400

clathrin assembly

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0012345
Physical Location & Seq
Forward (+)
15963718 .. 15968230
4513 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG093400.1

Sequence Viewer

Length: 1752 bp
ATGGGTACATTCTCTGGCTTTAGAAAGGCTTATGGAGCTTTGAAGGACTCTACCAAGGTTGGCCTTATCAAGGTCAACAGCGAATTCAAGGATTTGGATATTGCCACTGTGAAGGCCACAAGTCACGTTGAGTGCCCTCCGAAAGAGCGTCATGTCCGAAAGATTTTCTCTGCAACATCGGTGGTACGCCCGCGAGCAGATGTGGCATATTGCATTCATGCGCTGGGCAAGAGATTTTCCAAGACACGGAGTTGGATTGTTGCCATAAAGACATTGATAGTTATTCATAGGACATTGCGAGAGGGTGATCCTACCTTTCGAGAGGAGCTTCTGAACTATTCTCAGAGAGGACATATGCTCCAAATTTCCAATTTTAAAGACGACTCGAGTCCCCTTGCTTGGGATTGTTCTTCTTGGGTTAGGACATATGCGCTCTTTTTAGAAGAACGTCTAGAATGTTTCCGAGTTTTGAAATATGACATTGAGTCAGAGCGTTTGACCAAAACATCGCCAGGATCAACCAAGGTGCATAGTAGAACACGAATGTTGGGAGCTGATGAACTGTTGGAGCAGCTACCTGCACTGCAGCAACTTCTTTACCGTCTAGTTGGTTGCCAGCCTGAAGGAACGGCTTATAACAATTACCTCATACAATATGCTTTGGCTCTGGTATTAAAAGAGAGCTTTAAAATATATTGTGCCATCAATGATGGAATCATAAATCTCGTAGATATGTTCTTTGATATGCCAAGACACGATGCAGTTAAAGCTCTCAATATTTACAAAAGAGCCGGTCAACAGGCTGAGCATCTTGCTGAGTTTTATGAGTATTGCAAGGGTTTGGATCTTGCCAGAACTTTTCAGTTTCCAACACTGAGACAGCCACCGCCGTCATTTCTTGCAACAATGGAAGAGTACATAAAAGAAGCGCCTCAGTCCAGTGCTGTTCAGAAGAGACTGGAGTACCACGAGACAGAAGAGCGGCCTCAACAACCAGTGCCTCCGCCTCCAGAGCCTGAAAAAAGAGAAGAAGAAGAAGAAGAAAAAGTTGAGGAACCACCGGAAAAAGTTGAGGAAGAACCCCAACCAAAGGAGGAAGAGGTAGTTGAACCTCCTCCCTTGATCGAAACTGATCTCCTGGGCCTAAATGAAATAAATCCAAGAGCTGCAGAAATTGAAGAAAGCAATGCTCTAGCTCTTGCTATAATTCCAAATGGGACTGAACCACAATCTGGATCAAATTTGAATGATATCGGTGGGACTTCTGGTTGGGAGCTTGCCCTGGTAACCACACCAAGCACCAATACTGGCCCCGTGGTAGATAAAAAATTGGCTGGTGGGTTTGACAAGCTATTACTCGATAGCTTGTATGAAGATGATGGTGCAAGGAGACAGCTACAACTCCAGAATGCAGGATATGGTTATGGCGCGACAAGCCTGCAAAATCCATTTGAACAAGCACAGCAGCAGCCTGTACATGATCCATTTGCAATGTCTAACAGCATAGCGCCTCCTACGAATGTGCAAATGGCACTAATGGCTCAACAACAACACCAAGTACACCAACAGCAACACCAAATGCAGCAACAGTATCAACAACAACAGAACATGATGATGGTACCTCACCCATATTATTCTCAATATCAACAGGCGCAACAACCCGCAGGCCCTTCGAATCCATTTGGAGACCCTTTCAGCTTCCCTCCTCCTTCTAGTGCAATGCCTAACCAGGGAAACCAACACCTACTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANTH

Protein Analysis

583

Amino Acids

65.93

Weight (kDa)

5.36

Isoelectric Point (pI)

60.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANTH PF07651 31 - 309 1.9e-91 ANTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012345)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25940 AT5G57200
fragaria_vesca FvH4_4g07320
malus_domestica MD13G1242200.v1.1 MD16G1249100.v1.1
prunus_persica Prupe.1G075800_v2.0.a1 Prupe.1G076000_v2.0.a1
pyrus_communis pycom13g21390 pycom16g20850
rosa_chinensis RchiOBHm_Chr4g0399681
rosa_laevigata RLG00000009247
rosa_multiflora Rmu_co8405013.1_g000001
rosa_roxburghii Rroxscaffold_5G00344590
rosa_rugosa Rorug04G0018100
rosa_samantha Rh4AG095900 Rh4BG093400 Rh4CG104500 Rh4DG088500
rosa_wichuraiana Rw4G007900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 636
Acc36I ACCTGC 1 cut(s) 586
Acc65I GGTACC 1 cut(s) 1618
AccB1I GGYRCC 1 cut(s) 1618
AccB7I CCANNNNNTGG 1 cut(s) 1232
AccBSI CCGCTC 1 cut(s) 982
AccII CGCG 2 cut(s) 193, 1430
AciI CCGC 5 cut(s) 191, 887, 982, 1004, 1662
AclWI GGATC 5 cut(s) 302, 523, 852, 1243, 1475
AcsI RAATTY 3 cut(s) 83, 363, 1240
AcuI CTGAAG 1 cut(s) 642
AfaI GTAC 7 cut(s) 7, 186, 917, 965, 1476, 1560, 1620
AfiI CCNNNNNNNGG 7 cut(s) 70, 246, 399, 400, 1090, 1232, 1730
AgsI TTSAA 7 cut(s) 43, 88, 472, 1109, 1178, 1246, 1454
AhdI GACNNNNNGTC 1 cut(s) 484
AjnI CCWGG 4 cut(s) 511, 1137, 1281, 1728
Alw26I GTCTC 5 cut(s) 871, 949, 965, 1384, 1680
AlwI GGATC 5 cut(s) 302, 523, 852, 1243, 1475
AlwNI CAGNNNCTG 1 cut(s) 1016
Ama87I CYCGRG 1 cut(s) 385
AoxI GGCC 6 cut(s) 61, 114, 983, 1141, 1309, 1666
ApeKI GCWGC 6 cut(s) 571, 586, 1166, 1465, 1468, 1582
ApoI RAATTY 3 cut(s) 83, 363, 1240
Asp718I GGTACC 1 cut(s) 1618
AspLEI GCGC 6 cut(s) 223, 433, 931, 1430, 1510, 1654
AspS9I GGNCC 3 cut(s) 1141, 1310, 1667
AsuHPI GGTGA 2 cut(s) 317, 1616
AsuII TTCGAA 1 cut(s) 1673
AvaI CYCGRG 1 cut(s) 385
BaeGI GKGCMC 1 cut(s) 137
BaeI ACNNNNGTAYC 2 cut(s) 947, 980
BanI GGYRCC 1 cut(s) 1618
BauI CACGAG 1 cut(s) 968
BbvI GCAGC 6 cut(s) 583, 598, 1153, 1477, 1480, 1594
BccI CCATC 4 cut(s) 704, 710, 1373, 1609
BceAI ACGGC 2 cut(s) 645, 874
BcgI CGANNNNNNTGC 4 cut(s) 1420, 1454, 1653, 1687
BciT130I CCWGG 4 cut(s) 513, 1139, 1283, 1730
BcoDI GTCTC 5 cut(s) 871, 949, 965, 1384, 1680
BfaI CTAG 4 cut(s) 452, 605, 1193, 1713
BfmI CTRYAG 3 cut(s) 584, 1167, 1748
BfoI RGCGCY 2 cut(s) 932, 1511
BfuAI ACCTGC 1 cut(s) 586
BisI GCNGC 7 cut(s) 572, 587, 983, 1167, 1466, 1469, 1583
BlpI GCTNAGC 1 cut(s) 804
BlsI GCNGC 7 cut(s) 573, 588, 984, 1168, 1467, 1470, 1584
Bme1390I CCNGG 4 cut(s) 513, 1139, 1283, 1730
BmeRI GACNNNNNGTC 1 cut(s) 484
BmeT110I CYCGRG 1 cut(s) 385
BmgT120I GGNCC 3 cut(s) 1141, 1310, 1667
BmiI GGNNCC 3 cut(s) 1056, 1312, 1620
BmrFI CCNGG 4 cut(s) 513, 1139, 1283, 1730
BmsI GCATC 2 cut(s) 748, 817
BoxI GACNNNNGTC 1 cut(s) 387
BpmI CTGGAG 3 cut(s) 980, 993, 1388
Bpu1102I GCTNAGC 1 cut(s) 804
Bpu14I TTCGAA 1 cut(s) 1673
BsaI GGTCTC 1 cut(s) 1680
BsaJI CCNNGG 6 cut(s) 54, 522, 1138, 1281, 1314, 1729
BsaWI WCCGGW 1 cut(s) 1060
BsaXI ACNNNNNCTCC 2 cut(s) 342, 372
Bsc4I CCNNNNNNNGG 7 cut(s) 70, 246, 399, 400, 1090, 1232, 1730
Bse118I RCCGGY 1 cut(s) 791
Bse1I ACTGG 4 cut(s) 939, 963, 995, 1312
Bse3DI GCAATG 4 cut(s) 293, 1192, 1497, 1725
BseBI CCWGG 4 cut(s) 513, 1139, 1283, 1730
BseDI CCNNGG 6 cut(s) 54, 522, 1138, 1281, 1314, 1729
BseLI CCNNNNNNNGG 7 cut(s) 70, 246, 399, 400, 1090, 1232, 1730
BseMI GCAATG 4 cut(s) 293, 1192, 1497, 1725
BseMII CTCAG 5 cut(s) 356, 795, 807, 866, 947
BseNI ACTGG 4 cut(s) 939, 963, 995, 1312
BseRI GAGGAG 3 cut(s) 338, 1104, 1695
BseSI GKGCMC 1 cut(s) 137
BseXI GCAGC 6 cut(s) 583, 598, 1153, 1477, 1480, 1594
BseYI CCCAGC 1 cut(s) 223
BsgI GTGCAG 1 cut(s) 564
Bsh1236I CGCG 2 cut(s) 193, 1430
BshFI GGCC 6 cut(s) 63, 116, 985, 1143, 1311, 1668
BshNI GGYRCC 1 cut(s) 1618
BsiHKCI CYCGRG 1 cut(s) 385
BsiSI CCGG 2 cut(s) 792, 1061
BslFI GGGAC 3 cut(s) 375, 1231, 1273
BslI CCNNNNNNNGG 7 cut(s) 70, 246, 399, 400, 1090, 1232, 1730
BsmAI GTCTC 5 cut(s) 871, 949, 965, 1384, 1680
BsmFI GGGAC 3 cut(s) 375, 1231, 1273
BsmI GAATGC 2 cut(s) 213, 1414
BsnI GGCC 6 cut(s) 63, 116, 985, 1143, 1311, 1668
Bso31I GGTCTC 1 cut(s) 1680
BsoBI CYCGRG 1 cut(s) 385
Bsp119I TTCGAA 1 cut(s) 1673
Bsp1286I GDGCHC 1 cut(s) 137
Bsp1407I TGTACA 1 cut(s) 1474
Bsp143I GATC 7 cut(s) 307, 515, 844, 1122, 1132, 1235, 1480
Bsp1720I GCTNAGC 1 cut(s) 804
BspACI CCGC 5 cut(s) 191, 887, 982, 1004, 1662
BspANI GGCC 6 cut(s) 63, 116, 985, 1143, 1311, 1668
BspCNI CTCAG 5 cut(s) 355, 796, 808, 867, 946
BspFNI CGCG 2 cut(s) 193, 1430
BspLI GGNNCC 3 cut(s) 1056, 1312, 1620
BspMAI CTGCAG 2 cut(s) 588, 1171
BspMI ACCTGC 1 cut(s) 586
BspPI GGATC 5 cut(s) 302, 523, 852, 1243, 1475
BspQI GCTCTTC 1 cut(s) 972
BspT104I TTCGAA 1 cut(s) 1673
BspT107I GGYRCC 1 cut(s) 1618
BspTNI GGTCTC 1 cut(s) 1680
BsrBI CCGCTC 1 cut(s) 982
BsrDI GCAATG 4 cut(s) 293, 1192, 1497, 1725
BsrFI RCCGGY 1 cut(s) 791
BsrGI TGTACA 1 cut(s) 1474
BsrI ACTGG 4 cut(s) 939, 963, 995, 1312
BssAI RCCGGY 1 cut(s) 791
BssECI CCNNGG 6 cut(s) 54, 522, 1138, 1281, 1314, 1729
BssMI GATC 7 cut(s) 307, 515, 844, 1122, 1132, 1235, 1480
BssSI CACGAG 1 cut(s) 968
BssT1I CCWWGG 2 cut(s) 54, 522
Bst2BI CACGAG 1 cut(s) 968
Bst2UI CCWGG 4 cut(s) 513, 1139, 1283, 1730
Bst4CI ACNGT 5 cut(s) 109, 564, 602, 1590, 1749
Bst6I CTCTTC 4 cut(s) 906, 947, 972, 1092
BstAUI TGTACA 1 cut(s) 1474
BstBI TTCGAA 1 cut(s) 1673
BstC8I GCNNGC 6 cut(s) 191, 195, 617, 1278, 1439, 1666
BstDEI CTNAG 5 cut(s) 342, 804, 816, 875, 933
BstDSI CCRYGG 1 cut(s) 1314
BstEII GGTNACC 1 cut(s) 1285
BstENI CCTNNNNNAGG 1 cut(s) 68
BstFNI CGCG 2 cut(s) 193, 1430
BstH2I RGCGCY 2 cut(s) 932, 1511
BstHHI GCGC 6 cut(s) 223, 433, 931, 1430, 1510, 1654
BstKTI GATC 7 cut(s) 310, 518, 847, 1125, 1135, 1238, 1483
BstMAI GTCTC 5 cut(s) 871, 949, 965, 1384, 1680
BstMBI GATC 7 cut(s) 307, 515, 844, 1122, 1132, 1235, 1480
BstMWI GCNNNNNNNGC 6 cut(s) 35, 203, 767, 1012, 1434, 1538
BstNI CCWGG 4 cut(s) 513, 1139, 1283, 1730
BstPAI GACNNNNGTC 1 cut(s) 387
BstPI GGTNACC 1 cut(s) 1285
BstSCI CCNGG 4 cut(s) 511, 1137, 1281, 1728
BstSFI CTRYAG 3 cut(s) 584, 1167, 1748
BstSLI GKGCMC 1 cut(s) 137
BstUI CGCG 2 cut(s) 193, 1430
BstV1I GCAGC 6 cut(s) 583, 598, 1153, 1477, 1480, 1594
BstX2I RGATCY 1 cut(s) 844
BstYI RGATCY 1 cut(s) 844
BsuRI GGCC 6 cut(s) 63, 116, 985, 1143, 1311, 1668
BtgI CCRYGG 1 cut(s) 1314
BtgZI GCGATG 1 cut(s) 492
BtsI GCAGTG 1 cut(s) 581
BtsIMutI CAGTG 5 cut(s) 105, 581, 872, 946, 1002
BveI ACCTGC 1 cut(s) 586
Cac8I GCNNGC 6 cut(s) 191, 195, 617, 1278, 1439, 1666
CaiI CAGNNNCTG 1 cut(s) 1016
CfoI GCGC 6 cut(s) 223, 433, 931, 1430, 1510, 1654
Cfr10I RCCGGY 1 cut(s) 791
Cfr13I GGNCC 3 cut(s) 1141, 1310, 1667
CseI GACGC 1 cut(s) 137
Csp6I GTAC 7 cut(s) 6, 185, 916, 964, 1475, 1559, 1619
CspCI CAANNNNNGTGG 2 cut(s) 162, 197
CviAII CATG 4 cut(s) 152, 218, 1478, 1609
CviQI GTAC 7 cut(s) 6, 185, 916, 964, 1475, 1559, 1619
DdeI CTNAG 5 cut(s) 342, 804, 816, 875, 933
DpnI GATC 7 cut(s) 309, 517, 846, 1124, 1134, 1237, 1482
DpnII GATC 7 cut(s) 307, 515, 844, 1122, 1132, 1235, 1480
DraI TTTAAA 2 cut(s) 376, 688
DriI GACNNNNNGTC 1 cut(s) 484
Eam1104I CTCTTC 4 cut(s) 906, 947, 972, 1092
Eam1105I GACNNNNNGTC 1 cut(s) 484
EarI CTCTTC 4 cut(s) 906, 947, 972, 1092
EciI GGCGGA 1 cut(s) 993
Eco130I CCWWGG 2 cut(s) 54, 522
Eco31I GGTCTC 1 cut(s) 1680
Eco32I GATATC 1 cut(s) 1252
Eco57I CTGAAG 1 cut(s) 642
Eco88I CYCGRG 1 cut(s) 385
Eco91I GGTNACC 1 cut(s) 1285
EcoNI CCTNNNNNAGG 1 cut(s) 68
EcoO109I RGGNCCY 1 cut(s) 1667
EcoO65I GGTNACC 1 cut(s) 1285
EcoRI GAATTC 1 cut(s) 83
EcoRII CCWGG 4 cut(s) 511, 1137, 1281, 1728
EcoRV GATATC 1 cut(s) 1252
EcoT14I CCWWGG 2 cut(s) 54, 522
ErhI CCWWGG 2 cut(s) 54, 522
FaeI CATG 4 cut(s) 155, 221, 1481, 1612
FaqI GGGAC 3 cut(s) 375, 1231, 1273
FatI CATG 4 cut(s) 151, 217, 1477, 1608
FauI CCCGC 2 cut(s) 198, 1669
FauNDI CATATG 2 cut(s) 354, 427
Fnu4HI GCNGC 7 cut(s) 572, 587, 983, 1167, 1466, 1469, 1583
Fsp4HI GCNGC 7 cut(s) 572, 587, 983, 1167, 1466, 1469, 1583
FspBI CTAG 4 cut(s) 452, 605, 1193, 1713
GlaI GCGC 6 cut(s) 222, 432, 930, 1429, 1509, 1653
GluI GCNGC 7 cut(s) 572, 587, 983, 1167, 1466, 1469, 1583
GsaI CCCAGC 1 cut(s) 227
GsuI CTGGAG 3 cut(s) 980, 993, 1388
HaeII RGCGCY 2 cut(s) 932, 1511
HaeIII GGCC 6 cut(s) 63, 116, 985, 1143, 1311, 1668
HapII CCGG 2 cut(s) 792, 1061
HgaI GACGC 1 cut(s) 137
HhaI GCGC 6 cut(s) 223, 433, 931, 1430, 1510, 1654
Hin1II CATG 4 cut(s) 155, 221, 1481, 1612
Hin6I GCGC 6 cut(s) 221, 431, 929, 1428, 1508, 1652
HinP1I GCGC 6 cut(s) 221, 431, 929, 1428, 1508, 1652
HincII GTYRAC 2 cut(s) 76, 797
HindII GTYRAC 2 cut(s) 76, 797
HinfI GANTC 6 cut(s) 47, 383, 388, 485, 714, 1675
HpaII CCGG 2 cut(s) 792, 1061
HphI GGTGA 2 cut(s) 317, 1616
Hpy166II GTNNAC 3 cut(s) 76, 797, 1561
Hpy188I TCNGA 7 cut(s) 141, 158, 333, 345, 464, 490, 951
Hpy188III TCNNGA 5 cut(s) 320, 452, 1010, 1233, 1405
Hpy8I GTNNAC 3 cut(s) 76, 797, 1561
HpyAV CCTTC 5 cut(s) 37, 106, 617, 1680, 1719
HpyCH4III ACNGT 5 cut(s) 109, 564, 602, 1590, 1749
HpyCH4IV ACGT 2 cut(s) 126, 448
HpyF10VI GCNNNNNNNGC 6 cut(s) 35, 203, 767, 1012, 1434, 1538
HpyF3I CTNAG 5 cut(s) 342, 804, 816, 875, 933
HpySE526I ACGT 2 cut(s) 126, 448
Hsp92II CATG 4 cut(s) 155, 221, 1481, 1612
HspAI GCGC 6 cut(s) 221, 431, 929, 1428, 1508, 1652
KpnI GGTACC 1 cut(s) 1622
Kzo9I GATC 7 cut(s) 307, 515, 844, 1122, 1132, 1235, 1480
LguI GCTCTTC 1 cut(s) 972
LmnI GCTCC 6 cut(s) 35, 325, 363, 551, 568, 1273
Lsp1109I GCAGC 6 cut(s) 583, 598, 1153, 1477, 1480, 1594
LweI GCATC 2 cut(s) 748, 817
MaeI CTAG 4 cut(s) 452, 605, 1193, 1713
MaeII ACGT 2 cut(s) 126, 448
MaeIII GTNAC 2 cut(s) 122, 1285
MalI GATC 7 cut(s) 309, 517, 846, 1124, 1134, 1237, 1482
MbiI CCGCTC 1 cut(s) 982
MboI GATC 7 cut(s) 307, 515, 844, 1122, 1132, 1235, 1480
MflI RGATCY 1 cut(s) 844
MhlI GDGCHC 1 cut(s) 137
MluCI AATT 8 cut(s) 83, 363, 370, 640, 1173, 1206, 1240, 1328
MlyI GAGTC 4 cut(s) 41, 377, 397, 494
MmeI TCCRAC 3 cut(s) 233, 546, 893
MseI TTAA 4 cut(s) 375, 674, 687, 765
MslI CAYNNNNRTG 1 cut(s) 1613
MspI CCGG 2 cut(s) 792, 1061
MspR9I CCNGG 4 cut(s) 513, 1139, 1283, 1730
Mva1269I GAATGC 2 cut(s) 213, 1414
MvaI CCWGG 4 cut(s) 513, 1139, 1283, 1730
MvnI CGCG 2 cut(s) 193, 1430
MwoI GCNNNNNNNGC 6 cut(s) 35, 203, 767, 1012, 1434, 1538
NdeI CATATG 2 cut(s) 354, 427
NdeII GATC 7 cut(s) 307, 515, 844, 1122, 1132, 1235, 1480
NlaIII CATG 4 cut(s) 155, 221, 1481, 1612
NlaIV GGNNCC 3 cut(s) 1056, 1312, 1620
NmuCI GTSAC 1 cut(s) 122
NspV TTCGAA 1 cut(s) 1673
PaeR7I CTCGAG 1 cut(s) 385
PciSI GCTCTTC 1 cut(s) 972
PctI GAATGC 2 cut(s) 213, 1414
PfeI GAWTC 2 cut(s) 714, 1675
PflMI CCANNNNNTGG 1 cut(s) 1232
PkrI GCNGC 7 cut(s) 573, 588, 984, 1168, 1467, 1470, 1584
PleI GAGTC 4 cut(s) 41, 377, 396, 493
PpsI GAGTC 4 cut(s) 41, 377, 396, 493
PshAI GACNNNNGTC 1 cut(s) 387
PsiI TTATAA 1 cut(s) 636
Psp6I CCWGG 4 cut(s) 511, 1137, 1281, 1728
PspEI GGTNACC 1 cut(s) 1285
PspFI CCCAGC 1 cut(s) 223
PspGI CCWGG 4 cut(s) 511, 1137, 1281, 1728
PspN4I GGNNCC 3 cut(s) 1056, 1312, 1620
PspPI GGNCC 3 cut(s) 1141, 1310, 1667
PspXI VCTCGAGB 1 cut(s) 385
PstI CTGCAG 2 cut(s) 588, 1171
PstNI CAGNNNCTG 1 cut(s) 1016
PsuI RGATCY 1 cut(s) 844
RsaI GTAC 7 cut(s) 7, 186, 917, 965, 1476, 1560, 1620
RsaNI GTAC 7 cut(s) 6, 185, 916, 964, 1475, 1559, 1619
RseI CAYNNNNRTG 1 cut(s) 1613
SapI GCTCTTC 1 cut(s) 972
SaqAI TTAA 4 cut(s) 375, 674, 687, 765
SatI GCNGC 7 cut(s) 572, 587, 983, 1167, 1466, 1469, 1583
Sau3AI GATC 7 cut(s) 307, 515, 844, 1122, 1132, 1235, 1480
Sau96I GGNCC 3 cut(s) 1141, 1310, 1667
SchI GAGTC 4 cut(s) 41, 377, 397, 494
ScrFI CCNGG 4 cut(s) 513, 1139, 1283, 1730
SduI GDGCHC 1 cut(s) 137
SfaNI GCATC 2 cut(s) 748, 817
SfcI CTRYAG 3 cut(s) 584, 1167, 1748
Sfr274I CTCGAG 1 cut(s) 385
SfuI TTCGAA 1 cut(s) 1673
SlaI CTCGAG 1 cut(s) 385
SmiMI CAYNNNNRTG 1 cut(s) 1613
SmlI CTYRAG 1 cut(s) 385
SmoI CTYRAG 1 cut(s) 385
Sse9I AATT 8 cut(s) 83, 363, 370, 640, 1173, 1206, 1240, 1328
SsiI CCGC 5 cut(s) 191, 887, 982, 1004, 1662
SspI AATATT 1 cut(s) 778
SspMI CTAG 4 cut(s) 452, 605, 1193, 1713
StyD4I CCNGG 4 cut(s) 511, 1137, 1281, 1728
StyI CCWWGG 2 cut(s) 54, 522
TaaI ACNGT 5 cut(s) 109, 564, 602, 1590, 1749
TaiI ACGT 2 cut(s) 129, 451
TaqI TCGA 5 cut(s) 319, 386, 1125, 1359, 1673
TasI AATT 8 cut(s) 83, 363, 370, 640, 1173, 1206, 1240, 1328
TatI WGTACW 3 cut(s) 915, 1474, 1558
TauI GCSGC 1 cut(s) 985
TfiI GAWTC 2 cut(s) 714, 1675
Tru1I TTAA 4 cut(s) 375, 674, 687, 765
Tru9I TTAA 4 cut(s) 375, 674, 687, 765
TscAI CASTG 5 cut(s) 112, 588, 879, 946, 1002
TseFI GTSAC 1 cut(s) 122
TseI GCWGC 6 cut(s) 571, 586, 1166, 1465, 1468, 1582
Tsp45I GTSAC 1 cut(s) 122
TspDTI ATGAA 5 cut(s) 206, 275, 573, 1164, 1386
TspGWI ACGGA 1 cut(s) 262
TspRI CASTG 5 cut(s) 112, 588, 879, 946, 1002
Van91I CCANNNNNTGG 1 cut(s) 1232
XagI CCTNNNNNAGG 1 cut(s) 68
XapI RAATTY 3 cut(s) 83, 363, 1240
XbaI TCTAGA 1 cut(s) 451
XhoI CTCGAG 1 cut(s) 385
XspI CTAG 4 cut(s) 452, 605, 1193, 1713
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.