Rh4DG088500

clathrin assembly

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0012345
Physical Location & Seq
Forward (+)
13467211 .. 13471779
4569 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG088500.1

Sequence Viewer

Length: 1752 bp
ATGGGTACATTCTCTGGCTTTAGAAAGGCCTATGGAGCTTTGAAGGACTCTACCAAGGTTGGCCTTATCAAGGTCAACAGCGAATTCAAGGATTTGGATATTGCCACTGTGAAGGCCACAAGTCACGTTGAGTGCCCTCCGAAAGAGCGACATGTCCGAAAGATTTTCTCTGCAACATCGGTGGTACGTCCGCGAGCAGATGTGGCATATTGCATTCATGCGCTGGGCAAGAGATTGTCGAAGACACGGAGTTGGATTGTTGCGATAAAGACATTGATAGTTATTCATAGGACATTGCGAGAGGGTGATCCTACCTTTAGAGAGGAGCTTCTGAACTATTCTCAGAGAGGACATATGCTCCAAATTTCCAATTTTAAAGACGACTCAAGTCCCCTTGCTTGGGATTGTTCTTCTTGGGTTAGGACATATGCACTCTTTTTAGAAGAACGTCTAGAATGTTTCCGAGTTTTGAAATATGACATTGAGTCAGAGCGTTTGACTAAAACATCGCCAGGATCAACCAAGGTGCATAGTAGAACACGAATGTTGGGAGCTGATGAACTGTTGGAGCAGCTACCTGCACTGCAGCAACTTCTTTACCGTCTAGTTGGTTGCCAGCCTGAAGGAACAGCTTATAACAATTACCTCATACAATATGCCTTGGCTCTGGTATTAAAAGAGAGCTTTAAAATATATTGTGCCATCAATGATGGAATCATAAATCTCGTAGATATGTTCTTTGATATGCCAAGACACGATGCAGTTAAAGCTCTCAATATTTACAAAAGAGCCGGTCAACAGGCTGAGCATCTTGCTGAGTTTTATGAGTATTGCAAGGGTTTGGATCTTGCTAGAACTTTTCAGTTTCCAACACTGAGACAGCCACCGCCGTCATTTCTTGCAACAATGGAAGAGTACATAAAAGAAGCGCCTCAGTCCGGTGTTCAGAAGAGACTGGAGTACCACGAGACAGAAGAGCGGCCTCAACAACCAGCGCCTCCGCCTCCAGAGCCTGAAAAAAAAGAAGAAGAAGAAGAAGAAAAAGTTGAGGAACCACAGGAAAAAGTTGAGGAAGAACCCCAACCAAAGGAGGAAGAGGTAGTTGAACCTCCTCCCTTGATCGAAACTGATCTCCTGGGCCTAAATGAAATAAATCCAAGAGCTGCAGAAATTGAAGAAAGCAATGCTCTAGCTCTTGCTATAATTCCAAATGGGACTGAACCACAATCTGGATCAAATTTGAATGATATCGGTGGGACTTCAGGTTGGGAGCTGGCCCTGGTAACCACACCAAGCACCAATACTGGCCCCGTGGTAGATAAAAAATTGGCTGGTGGGTTTGACAAGCTATTACTCGATAGCTTGTATGAAGATGATGGTGCAAGAAGACAGCTACAACTCCAGAATGCAGGATATGGTTATGGCGCGACAAGCCTGCAAAATCCATTTGAACAAGCACAGCAGCAGCCTGTACATGATCCATTTGCAATGTCTAACAGCATAGCGCCTCCTACGAATGTGCAAATGGCACTAATGGCTCAACAACAACACCAAGTACACCAACAGCAACACCAAATGCAGCAACAGTATCAACAACAACAGAACATGATGATGGTACCTCACCCATATTATTCTCAATATCAACAGGCGCAACAACCCGCAGGCCCTTCGAATCCATTTGGAGACCCTTTCAGCTTCCCTCCTCCTTCTTCTAGTGCAATGCCTAACCAGGGAAACCAACACCTACTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANTH

Protein Analysis

583

Amino Acids

65.85

Weight (kDa)

5.36

Isoelectric Point (pI)

59.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANTH PF07651 31 - 309 4.6e-92 ANTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012345)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25940 AT5G57200
fragaria_vesca FvH4_4g07320
malus_domestica MD13G1242200.v1.1 MD16G1249100.v1.1
prunus_persica Prupe.1G075800_v2.0.a1 Prupe.1G076000_v2.0.a1
pyrus_communis pycom13g21390 pycom16g20850
rosa_chinensis RchiOBHm_Chr4g0399681
rosa_laevigata RLG00000009247
rosa_multiflora Rmu_co8405013.1_g000001
rosa_roxburghii Rroxscaffold_5G00344590
rosa_rugosa Rorug04G0018100
rosa_samantha Rh4AG095900 Rh4BG093400 Rh4CG104500 Rh4DG088500
rosa_wichuraiana Rw4G007900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 636
Acc36I ACCTGC 1 cut(s) 586
Acc65I GGTACC 1 cut(s) 1615
AccB1I GGYRCC 1 cut(s) 1615
AccB7I CCANNNNNTGG 1 cut(s) 1229
AccBSI CCGCTC 1 cut(s) 979
AccII CGCG 2 cut(s) 193, 1427
AciI CCGC 5 cut(s) 191, 887, 979, 1001, 1659
AclWI GGATC 5 cut(s) 302, 523, 852, 1240, 1472
AcsI RAATTY 3 cut(s) 83, 363, 1237
AcuI CTGAAG 2 cut(s) 642, 1245
AfaI GTAC 7 cut(s) 7, 186, 917, 962, 1473, 1557, 1617
AfiI CCNNNNNNNGG 7 cut(s) 70, 399, 400, 938, 1087, 1229, 1730
AflIII ACRYGT 1 cut(s) 151
AgsI TTSAA 7 cut(s) 43, 88, 472, 1106, 1175, 1243, 1451
AhdI GACNNNNNGTC 1 cut(s) 484
AjnI CCWGG 4 cut(s) 511, 1134, 1278, 1728
Alw26I GTCTC 4 cut(s) 871, 946, 962, 1677
AlwI GGATC 5 cut(s) 302, 523, 852, 1240, 1472
AlwNI CAGNNNCTG 1 cut(s) 1013
AoxI GGCC 8 cut(s) 27, 61, 114, 980, 1138, 1275, 1306, 1663
ApeKI GCWGC 6 cut(s) 571, 586, 1163, 1462, 1465, 1579
ApoI RAATTY 3 cut(s) 83, 363, 1237
Asp718I GGTACC 1 cut(s) 1615
AspLEI GCGC 6 cut(s) 223, 931, 997, 1427, 1507, 1651
AspS9I GGNCC 4 cut(s) 1138, 1276, 1307, 1664
AsuHPI GGTGA 2 cut(s) 317, 1613
AsuII TTCGAA 1 cut(s) 1670
BaeGI GKGCMC 1 cut(s) 137
BaeI ACNNNNGTAYC 2 cut(s) 944, 977
BanI GGYRCC 1 cut(s) 1615
BauI CACGAG 1 cut(s) 965
BbsI GAAGAC 2 cut(s) 248, 1393
BbvI GCAGC 6 cut(s) 583, 598, 1150, 1474, 1477, 1591
BccI CCATC 4 cut(s) 704, 710, 1370, 1606
BceAI ACGGC 1 cut(s) 874
BcgI CGANNNNNNTGC 4 cut(s) 1417, 1451, 1650, 1684
BciT130I CCWGG 4 cut(s) 513, 1136, 1280, 1730
BcoDI GTCTC 4 cut(s) 871, 946, 962, 1677
BfaI CTAG 5 cut(s) 452, 605, 852, 1190, 1713
BfmI CTRYAG 3 cut(s) 584, 1164, 1748
BfoI RGCGCY 3 cut(s) 932, 998, 1508
BfuAI ACCTGC 1 cut(s) 586
BisI GCNGC 7 cut(s) 572, 587, 980, 1164, 1463, 1466, 1580
BlpI GCTNAGC 1 cut(s) 804
BlsI GCNGC 7 cut(s) 573, 588, 981, 1165, 1464, 1467, 1581
Bme1390I CCNGG 4 cut(s) 513, 1136, 1280, 1730
BmeRI GACNNNNNGTC 1 cut(s) 484
BmgT120I GGNCC 4 cut(s) 1138, 1276, 1307, 1664
BmiI GGNNCC 3 cut(s) 1053, 1309, 1617
BmrFI CCNGG 4 cut(s) 513, 1136, 1280, 1730
BmsI GCATC 2 cut(s) 748, 817
BoxI GACNNNNGTC 1 cut(s) 387
BpiI GAAGAC 2 cut(s) 248, 1393
BpmI CTGGAG 3 cut(s) 977, 990, 1385
Bpu1102I GCTNAGC 1 cut(s) 804
Bpu14I TTCGAA 1 cut(s) 1670
BpuEI CTTGAG 1 cut(s) 370
BsaI GGTCTC 1 cut(s) 1677
BsaJI CCNNGG 7 cut(s) 54, 522, 660, 1135, 1278, 1311, 1729
BsaWI WCCGGW 1 cut(s) 938
BsaXI ACNNNNNCTCC 2 cut(s) 342, 372
Bsc4I CCNNNNNNNGG 7 cut(s) 70, 399, 400, 938, 1087, 1229, 1730
Bse118I RCCGGY 1 cut(s) 791
Bse1I ACTGG 2 cut(s) 960, 1309
Bse3DI GCAATG 4 cut(s) 293, 1189, 1494, 1725
BseBI CCWGG 4 cut(s) 513, 1136, 1280, 1730
BseDI CCNNGG 7 cut(s) 54, 522, 660, 1135, 1278, 1311, 1729
BseLI CCNNNNNNNGG 7 cut(s) 70, 399, 400, 938, 1087, 1229, 1730
BseMI GCAATG 4 cut(s) 293, 1189, 1494, 1725
BseMII CTCAG 5 cut(s) 356, 795, 807, 866, 947
BseNI ACTGG 2 cut(s) 960, 1309
BseRI GAGGAG 3 cut(s) 338, 1101, 1692
BseSI GKGCMC 1 cut(s) 137
BseXI GCAGC 6 cut(s) 583, 598, 1150, 1474, 1477, 1591
BseYI CCCAGC 1 cut(s) 223
BsgI GTGCAG 1 cut(s) 564
Bsh1236I CGCG 2 cut(s) 193, 1427
BshFI GGCC 8 cut(s) 29, 63, 116, 982, 1140, 1277, 1308, 1665
BshNI GGYRCC 1 cut(s) 1615
BsiSI CCGG 2 cut(s) 792, 939
BslFI GGGAC 3 cut(s) 375, 1228, 1270
BslI CCNNNNNNNGG 7 cut(s) 70, 399, 400, 938, 1087, 1229, 1730
BsmAI GTCTC 4 cut(s) 871, 946, 962, 1677
BsmFI GGGAC 3 cut(s) 375, 1228, 1270
BsmI GAATGC 2 cut(s) 213, 1411
BsnI GGCC 8 cut(s) 29, 63, 116, 982, 1140, 1277, 1308, 1665
Bso31I GGTCTC 1 cut(s) 1677
Bsp119I TTCGAA 1 cut(s) 1670
Bsp1286I GDGCHC 1 cut(s) 137
Bsp1407I TGTACA 1 cut(s) 1471
Bsp143I GATC 7 cut(s) 307, 515, 844, 1119, 1129, 1232, 1477
Bsp1720I GCTNAGC 1 cut(s) 804
BspACI CCGC 5 cut(s) 191, 887, 979, 1001, 1659
BspANI GGCC 8 cut(s) 29, 63, 116, 982, 1140, 1277, 1308, 1665
BspCNI CTCAG 5 cut(s) 355, 796, 808, 867, 946
BspFNI CGCG 2 cut(s) 193, 1427
BspLI GGNNCC 3 cut(s) 1053, 1309, 1617
BspMAI CTGCAG 2 cut(s) 588, 1168
BspMI ACCTGC 1 cut(s) 586
BspPI GGATC 5 cut(s) 302, 523, 852, 1240, 1472
BspQI GCTCTTC 1 cut(s) 969
BspT104I TTCGAA 1 cut(s) 1670
BspT107I GGYRCC 1 cut(s) 1615
BspTNI GGTCTC 1 cut(s) 1677
BsrBI CCGCTC 1 cut(s) 979
BsrDI GCAATG 4 cut(s) 293, 1189, 1494, 1725
BsrFI RCCGGY 1 cut(s) 791
BsrGI TGTACA 1 cut(s) 1471
BsrI ACTGG 2 cut(s) 960, 1309
BssAI RCCGGY 1 cut(s) 791
BssECI CCNNGG 7 cut(s) 54, 522, 660, 1135, 1278, 1311, 1729
BssMI GATC 7 cut(s) 307, 515, 844, 1119, 1129, 1232, 1477
BssSI CACGAG 1 cut(s) 965
BssT1I CCWWGG 3 cut(s) 54, 522, 660
Bst2BI CACGAG 1 cut(s) 965
Bst2UI CCWGG 4 cut(s) 513, 1136, 1280, 1730
Bst4CI ACNGT 5 cut(s) 109, 564, 602, 1587, 1749
Bst6I CTCTTC 4 cut(s) 906, 944, 969, 1089
BstAUI TGTACA 1 cut(s) 1471
BstBI TTCGAA 1 cut(s) 1670
BstC8I GCNNGC 5 cut(s) 195, 617, 1275, 1436, 1663
BstDEI CTNAG 5 cut(s) 342, 804, 816, 875, 933
BstDSI CCRYGG 1 cut(s) 1311
BstEII GGTNACC 1 cut(s) 1282
BstENI CCTNNNNNAGG 1 cut(s) 68
BstFNI CGCG 2 cut(s) 193, 1427
BstH2I RGCGCY 3 cut(s) 932, 998, 1508
BstHHI GCGC 6 cut(s) 223, 931, 997, 1427, 1507, 1651
BstKTI GATC 7 cut(s) 310, 518, 847, 1122, 1132, 1235, 1480
BstMAI GTCTC 4 cut(s) 871, 946, 962, 1677
BstMBI GATC 7 cut(s) 307, 515, 844, 1119, 1129, 1232, 1477
BstMWI GCNNNNNNNGC 6 cut(s) 35, 203, 767, 1009, 1431, 1535
BstNI CCWGG 4 cut(s) 513, 1136, 1280, 1730
BstNSI RCATGY 1 cut(s) 155
BstPAI GACNNNNGTC 1 cut(s) 387
BstPI GGTNACC 1 cut(s) 1282
BstSCI CCNGG 4 cut(s) 511, 1134, 1278, 1728
BstSFI CTRYAG 3 cut(s) 584, 1164, 1748
BstSLI GKGCMC 1 cut(s) 137
BstUI CGCG 2 cut(s) 193, 1427
BstV1I GCAGC 6 cut(s) 583, 598, 1150, 1474, 1477, 1591
BstV2I GAAGAC 2 cut(s) 248, 1393
BstX2I RGATCY 1 cut(s) 844
BstYI RGATCY 1 cut(s) 844
BsuRI GGCC 8 cut(s) 29, 63, 116, 982, 1140, 1277, 1308, 1665
BtgI CCRYGG 1 cut(s) 1311
BtgZI GCGATG 1 cut(s) 492
BtsI GCAGTG 1 cut(s) 581
BtsIMutI CAGTG 3 cut(s) 105, 581, 872
BveI ACCTGC 1 cut(s) 586
Cac8I GCNNGC 5 cut(s) 195, 617, 1275, 1436, 1663
CaiI CAGNNNCTG 1 cut(s) 1013
CfoI GCGC 6 cut(s) 223, 931, 997, 1427, 1507, 1651
Cfr10I RCCGGY 1 cut(s) 791
Cfr13I GGNCC 4 cut(s) 1138, 1276, 1307, 1664
Csp6I GTAC 7 cut(s) 6, 185, 916, 961, 1472, 1556, 1616
CspCI CAANNNNNGTGG 2 cut(s) 162, 197
CviAII CATG 4 cut(s) 152, 218, 1475, 1606
CviQI GTAC 7 cut(s) 6, 185, 916, 961, 1472, 1556, 1616
DdeI CTNAG 5 cut(s) 342, 804, 816, 875, 933
DpnI GATC 7 cut(s) 309, 517, 846, 1121, 1131, 1234, 1479
DpnII GATC 7 cut(s) 307, 515, 844, 1119, 1129, 1232, 1477
DraI TTTAAA 2 cut(s) 376, 688
DriI GACNNNNNGTC 1 cut(s) 484
Eam1104I CTCTTC 4 cut(s) 906, 944, 969, 1089
Eam1105I GACNNNNNGTC 1 cut(s) 484
EarI CTCTTC 4 cut(s) 906, 944, 969, 1089
EciI GGCGGA 1 cut(s) 990
Eco130I CCWWGG 3 cut(s) 54, 522, 660
Eco147I AGGCCT 1 cut(s) 29
Eco31I GGTCTC 1 cut(s) 1677
Eco32I GATATC 1 cut(s) 1249
Eco57I CTGAAG 2 cut(s) 642, 1245
Eco91I GGTNACC 1 cut(s) 1282
EcoNI CCTNNNNNAGG 1 cut(s) 68
EcoO109I RGGNCCY 1 cut(s) 1664
EcoO65I GGTNACC 1 cut(s) 1282
EcoRI GAATTC 1 cut(s) 83
EcoRII CCWGG 4 cut(s) 511, 1134, 1278, 1728
EcoRV GATATC 1 cut(s) 1249
EcoT14I CCWWGG 3 cut(s) 54, 522, 660
ErhI CCWWGG 3 cut(s) 54, 522, 660
FaeI CATG 4 cut(s) 155, 221, 1478, 1609
FaqI GGGAC 3 cut(s) 375, 1228, 1270
FatI CATG 4 cut(s) 151, 217, 1474, 1605
FauI CCCGC 1 cut(s) 1666
FauNDI CATATG 2 cut(s) 354, 427
Fnu4HI GCNGC 7 cut(s) 572, 587, 980, 1164, 1463, 1466, 1580
Fsp4HI GCNGC 7 cut(s) 572, 587, 980, 1164, 1463, 1466, 1580
FspBI CTAG 5 cut(s) 452, 605, 852, 1190, 1713
GlaI GCGC 6 cut(s) 222, 930, 996, 1426, 1506, 1650
GluI GCNGC 7 cut(s) 572, 587, 980, 1164, 1463, 1466, 1580
GsaI CCCAGC 1 cut(s) 227
GsuI CTGGAG 3 cut(s) 977, 990, 1385
HaeII RGCGCY 3 cut(s) 932, 998, 1508
HaeIII GGCC 8 cut(s) 29, 63, 116, 982, 1140, 1277, 1308, 1665
HapII CCGG 2 cut(s) 792, 939
HhaI GCGC 6 cut(s) 223, 931, 997, 1427, 1507, 1651
Hin1II CATG 4 cut(s) 155, 221, 1478, 1609
Hin6I GCGC 6 cut(s) 221, 929, 995, 1425, 1505, 1649
HinP1I GCGC 6 cut(s) 221, 929, 995, 1425, 1505, 1649
HincII GTYRAC 2 cut(s) 76, 797
HindII GTYRAC 2 cut(s) 76, 797
HinfI GANTC 5 cut(s) 47, 383, 485, 714, 1672
HpaII CCGG 2 cut(s) 792, 939
HphI GGTGA 2 cut(s) 317, 1613
Hpy166II GTNNAC 3 cut(s) 76, 797, 1558
Hpy188I TCNGA 7 cut(s) 141, 158, 333, 345, 464, 490, 948
Hpy188III TCNNGA 4 cut(s) 452, 1007, 1230, 1402
Hpy8I GTNNAC 3 cut(s) 76, 797, 1558
HpyAV CCTTC 5 cut(s) 37, 106, 617, 1677, 1716
HpyCH4III ACNGT 5 cut(s) 109, 564, 602, 1587, 1749
HpyCH4IV ACGT 3 cut(s) 126, 187, 448
HpyF10VI GCNNNNNNNGC 6 cut(s) 35, 203, 767, 1009, 1431, 1535
HpyF3I CTNAG 5 cut(s) 342, 804, 816, 875, 933
HpySE526I ACGT 3 cut(s) 126, 187, 448
Hsp92II CATG 4 cut(s) 155, 221, 1478, 1609
HspAI GCGC 6 cut(s) 221, 929, 995, 1425, 1505, 1649
KpnI GGTACC 1 cut(s) 1619
Kzo9I GATC 7 cut(s) 307, 515, 844, 1119, 1129, 1232, 1477
LguI GCTCTTC 1 cut(s) 969
LmnI GCTCC 6 cut(s) 35, 325, 363, 551, 568, 1270
Lsp1109I GCAGC 6 cut(s) 583, 598, 1150, 1474, 1477, 1591
LweI GCATC 2 cut(s) 748, 817
MaeI CTAG 5 cut(s) 452, 605, 852, 1190, 1713
MaeII ACGT 3 cut(s) 126, 187, 448
MaeIII GTNAC 2 cut(s) 122, 1282
MalI GATC 7 cut(s) 309, 517, 846, 1121, 1131, 1234, 1479
MbiI CCGCTC 1 cut(s) 979
MboI GATC 7 cut(s) 307, 515, 844, 1119, 1129, 1232, 1477
MflI RGATCY 1 cut(s) 844
MhlI GDGCHC 1 cut(s) 137
MluCI AATT 8 cut(s) 83, 363, 370, 640, 1170, 1203, 1237, 1325
MlyI GAGTC 3 cut(s) 41, 377, 494
MmeI TCCRAC 3 cut(s) 233, 546, 893
MseI TTAA 4 cut(s) 375, 674, 687, 765
MslI CAYNNNNRTG 1 cut(s) 1610
MspI CCGG 2 cut(s) 792, 939
MspR9I CCNGG 4 cut(s) 513, 1136, 1280, 1730
Mva1269I GAATGC 2 cut(s) 213, 1411
MvaI CCWGG 4 cut(s) 513, 1136, 1280, 1730
MvnI CGCG 2 cut(s) 193, 1427
MwoI GCNNNNNNNGC 6 cut(s) 35, 203, 767, 1009, 1431, 1535
NdeI CATATG 2 cut(s) 354, 427
NdeII GATC 7 cut(s) 307, 515, 844, 1119, 1129, 1232, 1477
NlaIII CATG 4 cut(s) 155, 221, 1478, 1609
NlaIV GGNNCC 3 cut(s) 1053, 1309, 1617
NmuCI GTSAC 1 cut(s) 122
NspI RCATGY 1 cut(s) 155
NspV TTCGAA 1 cut(s) 1670
PceI AGGCCT 1 cut(s) 29
PciI ACATGT 1 cut(s) 151
PciSI GCTCTTC 1 cut(s) 969
PctI GAATGC 2 cut(s) 213, 1411
PfeI GAWTC 2 cut(s) 714, 1672
PflMI CCANNNNNTGG 1 cut(s) 1229
PkrI GCNGC 7 cut(s) 573, 588, 981, 1165, 1464, 1467, 1581
PleI GAGTC 3 cut(s) 41, 377, 493
PpsI GAGTC 3 cut(s) 41, 377, 493
PscI ACATGT 1 cut(s) 151
PshAI GACNNNNGTC 1 cut(s) 387
PsiI TTATAA 1 cut(s) 636
Psp6I CCWGG 4 cut(s) 511, 1134, 1278, 1728
PspEI GGTNACC 1 cut(s) 1282
PspFI CCCAGC 1 cut(s) 223
PspGI CCWGG 4 cut(s) 511, 1134, 1278, 1728
PspN4I GGNNCC 3 cut(s) 1053, 1309, 1617
PspPI GGNCC 4 cut(s) 1138, 1276, 1307, 1664
PstI CTGCAG 2 cut(s) 588, 1168
PstNI CAGNNNCTG 1 cut(s) 1013
PsuI RGATCY 1 cut(s) 844
RsaI GTAC 7 cut(s) 7, 186, 917, 962, 1473, 1557, 1617
RsaNI GTAC 7 cut(s) 6, 185, 916, 961, 1472, 1556, 1616
RseI CAYNNNNRTG 1 cut(s) 1610
SapI GCTCTTC 1 cut(s) 969
SaqAI TTAA 4 cut(s) 375, 674, 687, 765
SatI GCNGC 7 cut(s) 572, 587, 980, 1164, 1463, 1466, 1580
Sau3AI GATC 7 cut(s) 307, 515, 844, 1119, 1129, 1232, 1477
Sau96I GGNCC 4 cut(s) 1138, 1276, 1307, 1664
SchI GAGTC 3 cut(s) 41, 377, 494
ScrFI CCNGG 4 cut(s) 513, 1136, 1280, 1730
SduI GDGCHC 1 cut(s) 137
SfaNI GCATC 2 cut(s) 748, 817
SfcI CTRYAG 3 cut(s) 584, 1164, 1748
SfuI TTCGAA 1 cut(s) 1670
SmiMI CAYNNNNRTG 1 cut(s) 1610
SmlI CTYRAG 1 cut(s) 385
SmoI CTYRAG 1 cut(s) 385
Sse9I AATT 8 cut(s) 83, 363, 370, 640, 1170, 1203, 1237, 1325
SseBI AGGCCT 1 cut(s) 29
SsiI CCGC 5 cut(s) 191, 887, 979, 1001, 1659
SspI AATATT 1 cut(s) 778
SspMI CTAG 5 cut(s) 452, 605, 852, 1190, 1713
StuI AGGCCT 1 cut(s) 29
StyD4I CCNGG 4 cut(s) 511, 1134, 1278, 1728
StyI CCWWGG 3 cut(s) 54, 522, 660
TaaI ACNGT 5 cut(s) 109, 564, 602, 1587, 1749
TaiI ACGT 3 cut(s) 129, 190, 451
TaqI TCGA 4 cut(s) 239, 1122, 1356, 1670
TasI AATT 8 cut(s) 83, 363, 370, 640, 1170, 1203, 1237, 1325
TatI WGTACW 3 cut(s) 915, 1471, 1555
TauI GCSGC 1 cut(s) 982
TfiI GAWTC 2 cut(s) 714, 1672
Tru1I TTAA 4 cut(s) 375, 674, 687, 765
Tru9I TTAA 4 cut(s) 375, 674, 687, 765
TscAI CASTG 3 cut(s) 112, 588, 879
TseFI GTSAC 1 cut(s) 122
TseI GCWGC 6 cut(s) 571, 586, 1163, 1462, 1465, 1579
Tsp45I GTSAC 1 cut(s) 122
TspDTI ATGAA 5 cut(s) 206, 275, 573, 1161, 1383
TspGWI ACGGA 1 cut(s) 262
TspRI CASTG 3 cut(s) 112, 588, 879
Van91I CCANNNNNTGG 1 cut(s) 1229
XagI CCTNNNNNAGG 1 cut(s) 68
XapI RAATTY 3 cut(s) 83, 363, 1237
XbaI TCTAGA 1 cut(s) 451
XceI RCATGY 1 cut(s) 155
XspI CTAG 5 cut(s) 452, 605, 852, 1190, 1713
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.