RLG00000009247

clathrin assembly

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0012345
Physical Location & Seq
Reverse (-)
49716735 .. 49720698
3964 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009247

Sequence Viewer

Length: 1758 bp
ATGGGTACATTCTCTGGCTTTAGAAAAGCTTATGGAGCTTTGAAGGACTCTACCAAGGTTGGCCTTATCAAGGTCAACAGCGAATTCAAGGATTTGGATATTGCCACTGTGAAGGCCACAAGTCACGTTGAGTGCCCTCCGAAAGAGCGACATGTCCGTAAGATTTTCTCTGCAACATCGGTGGTACGCCCGCGAGCAGATGTGGCATATTGCATTCATGCGCTGGGCAAGAGATTGTCCAAGACACGGAGTTGGATTGTTGCGATAAAGACATTGATAGTTATTCATAGGACATTGCGAGAGGGTGATCCTACCTTTAGAGAGGAGCTTCTGAACTATTCTCAGAGAGGACATATGCTCCAAATTTCCAATTTTAAAGACGACTCAAGTCCCCTTGCTTGGGATTGTTCTTCTTGGGTTAGGACATATGCACTCTTTTTAGAAGAACGTCTAGAATGTTTCAGAGTTTTGAAATATGACATTGAGTCAGAGCGTTTGACTAAAACATCGCCAGGATCAACCAAGGTGCATAGTAGAACACGAATGTTGGGAGCTGATGAACTGTTGGAGCAGCTACCTGCACTGCAGCAGCTTCTTTACCGTCTAGTTGGTTGCCAGCCTGAAGGAACGGCTTATAACAATTACCTCATACAATATGCTTTGGCTCTGGTATTAAAAGAGAGCTTTAAAATATATTGTGCCATCAATGATGGAATCATAAATCTCGTAGATATGTTCTTTGATATGCCAAGACACGATGCAGTTAAAGCTCTCAATATTTACAAAAGAGCCGGTCAACAGGCTGAGCATCTTGCTGAGTTTTATGAGTATTGCAAGGGTTTGGATCTTGCTAGAACTTTTCAGTTTCCAACACTGAGACAGCCACCGCCGTCATTTCTTGCAACAATGGAAGAGTACATAAAAGAAGCGCCTCAGTCTGGTGCTGTTCAGAAGAGACTGGAGTACCACGAGACAGAAGAGCGGCCTCAACAACCAGCACCTCCGCCTCCAGACCCTGAAAAAAAAGAAGAAGAAGAAGAAGAAGAAAAAGTTGAGGAACCACCGGAAAAAGTTGAGGAAGAACCCCAACCAAAGGAGGAAGAGGTAGTTGAACCTCCTCCCTTGATCGAAACTGATCTCCTGGGCCTAAATGAAATAAATCCAAGAGCTGCAGAAATTGAAGAAAGCAATGCTCTAGCTCTTGCTATAATTCCAAATGGGACTGAACCACAATCTGGATCAAATTTGAATGATATCGGTGGGACTTCAGGTTGGGAGCTGGCCCTGGTAACCACACCAAGTACCAGTACTGGCCCCGTGGTAGATAAAAAATTGGCTGGTGGGTTTGACAAGCTATTACTCGATAGCTTGTATGAAGATGATGGTGCAAGGAGACAGCTACAACTCCAGAATGCAGGATATGGTTATGGCGCTACAAGCCTGCAAAATCCATTTGAACAAGCACAGCAGCAGCCTGTACATGATCCATTTGCAATGTCTAACAGCATAGCGCCGCCTACGAATGTGCAAATGGCACTAATGGCTCAACAACAACACCAAGTACACCAACAGCAACACCAAATGCAGCAACATTATCAACAACAACAGAACATGATGATGGTACCTCACCCATATTATTCTCAATATCAACAGGCGCAACAACCTGCAGGCCCTTCGAATCCATTTGGAGACCCTTTCAGCTTCCCTCCTCCTTCTTCTAGTGCAATGCCTAACCAGGGAAACCAACACCTACTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANTH

Protein Analysis

586

Amino Acids

65.99

Weight (kDa)

5.35

Isoelectric Point (pI)

60.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANTH PF07651 31 - 309 4.6e-92 ANTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012345)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25940 AT5G57200
fragaria_vesca FvH4_4g07320
malus_domestica MD13G1242200.v1.1 MD16G1249100.v1.1
prunus_persica Prupe.1G075800_v2.0.a1 Prupe.1G076000_v2.0.a1
pyrus_communis pycom13g21390 pycom16g20850
rosa_chinensis RchiOBHm_Chr4g0399681
rosa_laevigata RLG00000009247
rosa_multiflora Rmu_co8405013.1_g000001
rosa_roxburghii Rroxscaffold_5G00344590
rosa_rugosa Rorug04G0018100
rosa_samantha Rh4AG095900 Rh4BG093400 Rh4CG104500 Rh4DG088500
rosa_wichuraiana Rw4G007900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 636
Acc36I ACCTGC 2 cut(s) 586, 1672
Acc65I GGTACC 1 cut(s) 1621
AccB1I GGYRCC 1 cut(s) 1621
AccB7I CCANNNNNTGG 1 cut(s) 1235
AccBSI CCGCTC 1 cut(s) 982
AccII CGCG 1 cut(s) 193
AciI CCGC 5 cut(s) 191, 887, 982, 1004, 1514
AclWI GGATC 5 cut(s) 302, 523, 852, 1246, 1478
AcsI RAATTY 3 cut(s) 83, 363, 1243
AcuI CTGAAG 2 cut(s) 642, 1251
AfaI GTAC 9 cut(s) 7, 186, 917, 965, 1303, 1309, 1479, 1563, 1623
AfiI CCNNNNNNNGG 8 cut(s) 70, 246, 399, 400, 938, 1093, 1235, 1736
AflIII ACRYGT 1 cut(s) 151
AgsI TTSAA 7 cut(s) 43, 88, 472, 1112, 1181, 1249, 1457
AhdI GACNNNNNGTC 1 cut(s) 484
AjnI CCWGG 4 cut(s) 511, 1140, 1284, 1734
Alw26I GTCTC 5 cut(s) 871, 949, 965, 1387, 1683
AlwI GGATC 5 cut(s) 302, 523, 852, 1246, 1478
AlwNI CAGNNNCTG 1 cut(s) 1016
AoxI GGCC 7 cut(s) 61, 114, 983, 1144, 1281, 1312, 1669
ApeKI GCWGC 7 cut(s) 571, 586, 589, 1169, 1468, 1471, 1585
ApoI RAATTY 3 cut(s) 83, 363, 1243
Asp718I GGTACC 1 cut(s) 1621
AspLEI GCGC 5 cut(s) 223, 931, 1433, 1513, 1657
AspS9I GGNCC 4 cut(s) 1144, 1282, 1313, 1670
AsuHPI GGTGA 2 cut(s) 317, 1619
AsuII TTCGAA 1 cut(s) 1676
BaeGI GKGCMC 1 cut(s) 137
BaeI ACNNNNGTAYC 2 cut(s) 947, 980
BanI GGYRCC 1 cut(s) 1621
BauI CACGAG 1 cut(s) 968
BbvI GCAGC 7 cut(s) 583, 598, 601, 1156, 1480, 1483, 1597
BccI CCATC 4 cut(s) 704, 710, 1376, 1612
BceAI ACGGC 2 cut(s) 645, 874
BcgI CGANNNNNNTGC 2 cut(s) 1656, 1690
BciT130I CCWGG 4 cut(s) 513, 1142, 1286, 1736
BcoDI GTCTC 5 cut(s) 871, 949, 965, 1387, 1683
BfaI CTAG 5 cut(s) 452, 605, 852, 1196, 1719
BfmI CTRYAG 4 cut(s) 584, 1170, 1665, 1754
BfoI RGCGCY 3 cut(s) 932, 1434, 1514
BfuAI ACCTGC 2 cut(s) 586, 1672
BisI GCNGC 9 cut(s) 572, 587, 590, 983, 1170, 1469, 1472, 1514, 1586
BlpI GCTNAGC 1 cut(s) 804
BlsI GCNGC 9 cut(s) 573, 588, 591, 984, 1171, 1470, 1473, 1515, 1587
BmcAI AGTACT 1 cut(s) 1309
Bme1390I CCNGG 4 cut(s) 513, 1142, 1286, 1736
BmeRI GACNNNNNGTC 1 cut(s) 484
BmgT120I GGNCC 4 cut(s) 1144, 1282, 1313, 1670
BmiI GGNNCC 3 cut(s) 1059, 1315, 1623
BmrFI CCNGG 4 cut(s) 513, 1142, 1286, 1736
BmsI GCATC 2 cut(s) 748, 817
BoxI GACNNNNGTC 1 cut(s) 387
BpmI CTGGAG 3 cut(s) 980, 993, 1391
Bpu1102I GCTNAGC 1 cut(s) 804
Bpu14I TTCGAA 1 cut(s) 1676
BpuEI CTTGAG 1 cut(s) 370
BsaI GGTCTC 1 cut(s) 1683
BsaJI CCNNGG 6 cut(s) 54, 522, 1141, 1284, 1317, 1735
BsaWI WCCGGW 1 cut(s) 1063
BsaXI ACNNNNNCTCC 2 cut(s) 342, 372
Bsc4I CCNNNNNNNGG 8 cut(s) 70, 246, 399, 400, 938, 1093, 1235, 1736
Bse118I RCCGGY 1 cut(s) 791
Bse1I ACTGG 3 cut(s) 963, 1305, 1315
Bse3DI GCAATG 4 cut(s) 293, 1195, 1500, 1731
BseBI CCWGG 4 cut(s) 513, 1142, 1286, 1736
BseDI CCNNGG 6 cut(s) 54, 522, 1141, 1284, 1317, 1735
BseLI CCNNNNNNNGG 8 cut(s) 70, 246, 399, 400, 938, 1093, 1235, 1736
BseMI GCAATG 4 cut(s) 293, 1195, 1500, 1731
BseMII CTCAG 5 cut(s) 356, 795, 807, 866, 947
BseNI ACTGG 3 cut(s) 963, 1305, 1315
BseRI GAGGAG 3 cut(s) 338, 1107, 1698
BseSI GKGCMC 1 cut(s) 137
BseXI GCAGC 7 cut(s) 583, 598, 601, 1156, 1480, 1483, 1597
BseYI CCCAGC 1 cut(s) 223
BsgI GTGCAG 1 cut(s) 564
Bsh1236I CGCG 1 cut(s) 193
BshFI GGCC 7 cut(s) 63, 116, 985, 1146, 1283, 1314, 1671
BshNI GGYRCC 1 cut(s) 1621
BsiSI CCGG 2 cut(s) 792, 1064
BslFI GGGAC 3 cut(s) 375, 1234, 1276
BslI CCNNNNNNNGG 8 cut(s) 70, 246, 399, 400, 938, 1093, 1235, 1736
BsmAI GTCTC 5 cut(s) 871, 949, 965, 1387, 1683
BsmFI GGGAC 3 cut(s) 375, 1234, 1276
BsmI GAATGC 2 cut(s) 213, 1417
BsnI GGCC 7 cut(s) 63, 116, 985, 1146, 1283, 1314, 1671
Bso31I GGTCTC 1 cut(s) 1683
Bsp119I TTCGAA 1 cut(s) 1676
Bsp1286I GDGCHC 1 cut(s) 137
Bsp1407I TGTACA 1 cut(s) 1477
Bsp143I GATC 7 cut(s) 307, 515, 844, 1125, 1135, 1238, 1483
Bsp1720I GCTNAGC 1 cut(s) 804
BspACI CCGC 5 cut(s) 191, 887, 982, 1004, 1514
BspANI GGCC 7 cut(s) 63, 116, 985, 1146, 1283, 1314, 1671
BspCNI CTCAG 5 cut(s) 355, 796, 808, 867, 946
BspFNI CGCG 1 cut(s) 193
BspLI GGNNCC 3 cut(s) 1059, 1315, 1623
BspMAI CTGCAG 3 cut(s) 588, 1174, 1669
BspMI ACCTGC 2 cut(s) 586, 1672
BspPI GGATC 5 cut(s) 302, 523, 852, 1246, 1478
BspQI GCTCTTC 1 cut(s) 972
BspT104I TTCGAA 1 cut(s) 1676
BspT107I GGYRCC 1 cut(s) 1621
BspTNI GGTCTC 1 cut(s) 1683
BsrBI CCGCTC 1 cut(s) 982
BsrDI GCAATG 4 cut(s) 293, 1195, 1500, 1731
BsrFI RCCGGY 1 cut(s) 791
BsrGI TGTACA 1 cut(s) 1477
BsrI ACTGG 3 cut(s) 963, 1305, 1315
BssAI RCCGGY 1 cut(s) 791
BssECI CCNNGG 6 cut(s) 54, 522, 1141, 1284, 1317, 1735
BssMI GATC 7 cut(s) 307, 515, 844, 1125, 1135, 1238, 1483
BssSI CACGAG 1 cut(s) 968
BssT1I CCWWGG 2 cut(s) 54, 522
Bst2BI CACGAG 1 cut(s) 968
Bst2UI CCWGG 4 cut(s) 513, 1142, 1286, 1736
Bst4CI ACNGT 4 cut(s) 109, 564, 602, 1755
Bst6I CTCTTC 4 cut(s) 906, 947, 972, 1095
BstAUI TGTACA 1 cut(s) 1477
BstBI TTCGAA 1 cut(s) 1676
BstC8I GCNNGC 6 cut(s) 191, 195, 617, 1281, 1442, 1669
BstDEI CTNAG 5 cut(s) 342, 804, 816, 875, 933
BstDSI CCRYGG 1 cut(s) 1317
BstEII GGTNACC 1 cut(s) 1288
BstENI CCTNNNNNAGG 1 cut(s) 68
BstFNI CGCG 1 cut(s) 193
BstH2I RGCGCY 3 cut(s) 932, 1434, 1514
BstHHI GCGC 5 cut(s) 223, 931, 1433, 1513, 1657
BstKTI GATC 7 cut(s) 310, 518, 847, 1128, 1138, 1241, 1486
BstMAI GTCTC 5 cut(s) 871, 949, 965, 1387, 1683
BstMBI GATC 7 cut(s) 307, 515, 844, 1125, 1135, 1238, 1483
BstMWI GCNNNNNNNGC 5 cut(s) 35, 203, 767, 1437, 1541
BstNI CCWGG 4 cut(s) 513, 1142, 1286, 1736
BstNSI RCATGY 1 cut(s) 155
BstPAI GACNNNNGTC 1 cut(s) 387
BstPI GGTNACC 1 cut(s) 1288
BstSCI CCNGG 4 cut(s) 511, 1140, 1284, 1734
BstSFI CTRYAG 4 cut(s) 584, 1170, 1665, 1754
BstSLI GKGCMC 1 cut(s) 137
BstUI CGCG 1 cut(s) 193
BstV1I GCAGC 7 cut(s) 583, 598, 601, 1156, 1480, 1483, 1597
BstX2I RGATCY 1 cut(s) 844
BstYI RGATCY 1 cut(s) 844
BsuRI GGCC 7 cut(s) 63, 116, 985, 1146, 1283, 1314, 1671
BtgI CCRYGG 1 cut(s) 1317
BtgZI GCGATG 1 cut(s) 492
BtsI GCAGTG 1 cut(s) 581
BtsIMutI CAGTG 3 cut(s) 105, 581, 872
BveI ACCTGC 2 cut(s) 586, 1672
Cac8I GCNNGC 6 cut(s) 191, 195, 617, 1281, 1442, 1669
CaiI CAGNNNCTG 1 cut(s) 1016
CfoI GCGC 5 cut(s) 223, 931, 1433, 1513, 1657
Cfr10I RCCGGY 1 cut(s) 791
Cfr13I GGNCC 4 cut(s) 1144, 1282, 1313, 1670
Csp6I GTAC 9 cut(s) 6, 185, 916, 964, 1302, 1308, 1478, 1562, 1622
CspCI CAANNNNNGTGG 2 cut(s) 162, 197
CviAII CATG 4 cut(s) 152, 218, 1481, 1612
CviQI GTAC 9 cut(s) 6, 185, 916, 964, 1302, 1308, 1478, 1562, 1622
DdeI CTNAG 5 cut(s) 342, 804, 816, 875, 933
DpnI GATC 7 cut(s) 309, 517, 846, 1127, 1137, 1240, 1485
DpnII GATC 7 cut(s) 307, 515, 844, 1125, 1135, 1238, 1483
DraI TTTAAA 2 cut(s) 376, 688
DriI GACNNNNNGTC 1 cut(s) 484
Eam1104I CTCTTC 4 cut(s) 906, 947, 972, 1095
Eam1105I GACNNNNNGTC 1 cut(s) 484
EarI CTCTTC 4 cut(s) 906, 947, 972, 1095
EciI GGCGGA 1 cut(s) 993
Eco130I CCWWGG 2 cut(s) 54, 522
Eco31I GGTCTC 1 cut(s) 1683
Eco32I GATATC 1 cut(s) 1255
Eco57I CTGAAG 2 cut(s) 642, 1251
Eco91I GGTNACC 1 cut(s) 1288
EcoNI CCTNNNNNAGG 1 cut(s) 68
EcoO109I RGGNCCY 1 cut(s) 1670
EcoO65I GGTNACC 1 cut(s) 1288
EcoRI GAATTC 1 cut(s) 83
EcoRII CCWGG 4 cut(s) 511, 1140, 1284, 1734
EcoRV GATATC 1 cut(s) 1255
EcoT14I CCWWGG 2 cut(s) 54, 522
ErhI CCWWGG 2 cut(s) 54, 522
FaeI CATG 4 cut(s) 155, 221, 1484, 1615
FaqI GGGAC 3 cut(s) 375, 1234, 1276
FatI CATG 4 cut(s) 151, 217, 1480, 1611
FauI CCCGC 1 cut(s) 198
FauNDI CATATG 2 cut(s) 354, 427
Fnu4HI GCNGC 9 cut(s) 572, 587, 590, 983, 1170, 1469, 1472, 1514, 1586
Fsp4HI GCNGC 9 cut(s) 572, 587, 590, 983, 1170, 1469, 1472, 1514, 1586
FspBI CTAG 5 cut(s) 452, 605, 852, 1196, 1719
GlaI GCGC 5 cut(s) 222, 930, 1432, 1512, 1656
GluI GCNGC 9 cut(s) 572, 587, 590, 983, 1170, 1469, 1472, 1514, 1586
GsaI CCCAGC 1 cut(s) 227
GsuI CTGGAG 3 cut(s) 980, 993, 1391
HaeII RGCGCY 3 cut(s) 932, 1434, 1514
HaeIII GGCC 7 cut(s) 63, 116, 985, 1146, 1283, 1314, 1671
HapII CCGG 2 cut(s) 792, 1064
HhaI GCGC 5 cut(s) 223, 931, 1433, 1513, 1657
Hin1II CATG 4 cut(s) 155, 221, 1484, 1615
Hin6I GCGC 5 cut(s) 221, 929, 1431, 1511, 1655
HinP1I GCGC 5 cut(s) 221, 929, 1431, 1511, 1655
HincII GTYRAC 2 cut(s) 76, 797
HindII GTYRAC 2 cut(s) 76, 797
HindIII AAGCTT 1 cut(s) 27
HinfI GANTC 5 cut(s) 47, 383, 485, 714, 1678
HpaII CCGG 2 cut(s) 792, 1064
HphI GGTGA 2 cut(s) 317, 1619
Hpy166II GTNNAC 3 cut(s) 76, 797, 1564
Hpy188I TCNGA 6 cut(s) 141, 333, 345, 464, 490, 951
Hpy188III TCNNGA 4 cut(s) 452, 1010, 1236, 1408
Hpy8I GTNNAC 3 cut(s) 76, 797, 1564
HpyAV CCTTC 5 cut(s) 37, 106, 617, 1683, 1722
HpyCH4III ACNGT 4 cut(s) 109, 564, 602, 1755
HpyCH4IV ACGT 2 cut(s) 126, 448
HpyF10VI GCNNNNNNNGC 5 cut(s) 35, 203, 767, 1437, 1541
HpyF3I CTNAG 5 cut(s) 342, 804, 816, 875, 933
HpySE526I ACGT 2 cut(s) 126, 448
Hsp92II CATG 4 cut(s) 155, 221, 1484, 1615
HspAI GCGC 5 cut(s) 221, 929, 1431, 1511, 1655
KpnI GGTACC 1 cut(s) 1625
Kzo9I GATC 7 cut(s) 307, 515, 844, 1125, 1135, 1238, 1483
LguI GCTCTTC 1 cut(s) 972
LmnI GCTCC 6 cut(s) 35, 325, 363, 551, 568, 1276
Lsp1109I GCAGC 7 cut(s) 583, 598, 601, 1156, 1480, 1483, 1597
LweI GCATC 2 cut(s) 748, 817
MaeI CTAG 5 cut(s) 452, 605, 852, 1196, 1719
MaeII ACGT 2 cut(s) 126, 448
MaeIII GTNAC 2 cut(s) 122, 1288
MalI GATC 7 cut(s) 309, 517, 846, 1127, 1137, 1240, 1485
MbiI CCGCTC 1 cut(s) 982
MboI GATC 7 cut(s) 307, 515, 844, 1125, 1135, 1238, 1483
MflI RGATCY 1 cut(s) 844
MhlI GDGCHC 1 cut(s) 137
MluCI AATT 8 cut(s) 83, 363, 370, 640, 1176, 1209, 1243, 1331
MlyI GAGTC 3 cut(s) 41, 377, 494
MmeI TCCRAC 3 cut(s) 233, 546, 893
MseI TTAA 4 cut(s) 375, 674, 687, 765
MslI CAYNNNNRTG 1 cut(s) 1616
MspI CCGG 2 cut(s) 792, 1064
MspR9I CCNGG 4 cut(s) 513, 1142, 1286, 1736
Mva1269I GAATGC 2 cut(s) 213, 1417
MvaI CCWGG 4 cut(s) 513, 1142, 1286, 1736
MvnI CGCG 1 cut(s) 193
MwoI GCNNNNNNNGC 5 cut(s) 35, 203, 767, 1437, 1541
NdeI CATATG 2 cut(s) 354, 427
NdeII GATC 7 cut(s) 307, 515, 844, 1125, 1135, 1238, 1483
NlaIII CATG 4 cut(s) 155, 221, 1484, 1615
NlaIV GGNNCC 3 cut(s) 1059, 1315, 1623
NmuCI GTSAC 1 cut(s) 122
NspI RCATGY 1 cut(s) 155
NspV TTCGAA 1 cut(s) 1676
PciI ACATGT 1 cut(s) 151
PciSI GCTCTTC 1 cut(s) 972
PctI GAATGC 2 cut(s) 213, 1417
PfeI GAWTC 2 cut(s) 714, 1678
PflMI CCANNNNNTGG 1 cut(s) 1235
PkrI GCNGC 9 cut(s) 573, 588, 591, 984, 1171, 1470, 1473, 1515, 1587
PleI GAGTC 3 cut(s) 41, 377, 493
PpsI GAGTC 3 cut(s) 41, 377, 493
PscI ACATGT 1 cut(s) 151
PshAI GACNNNNGTC 1 cut(s) 387
PsiI TTATAA 1 cut(s) 636
Psp6I CCWGG 4 cut(s) 511, 1140, 1284, 1734
PspEI GGTNACC 1 cut(s) 1288
PspFI CCCAGC 1 cut(s) 223
PspGI CCWGG 4 cut(s) 511, 1140, 1284, 1734
PspN4I GGNNCC 3 cut(s) 1059, 1315, 1623
PspPI GGNCC 4 cut(s) 1144, 1282, 1313, 1670
PstI CTGCAG 3 cut(s) 588, 1174, 1669
PstNI CAGNNNCTG 1 cut(s) 1016
PsuI RGATCY 1 cut(s) 844
RsaI GTAC 9 cut(s) 7, 186, 917, 965, 1303, 1309, 1479, 1563, 1623
RsaNI GTAC 9 cut(s) 6, 185, 916, 964, 1302, 1308, 1478, 1562, 1622
RseI CAYNNNNRTG 1 cut(s) 1616
SapI GCTCTTC 1 cut(s) 972
SaqAI TTAA 4 cut(s) 375, 674, 687, 765
SatI GCNGC 9 cut(s) 572, 587, 590, 983, 1170, 1469, 1472, 1514, 1586
Sau3AI GATC 7 cut(s) 307, 515, 844, 1125, 1135, 1238, 1483
Sau96I GGNCC 4 cut(s) 1144, 1282, 1313, 1670
SbfI CCTGCAGG 1 cut(s) 1669
ScaI AGTACT 1 cut(s) 1309
SchI GAGTC 3 cut(s) 41, 377, 494
ScrFI CCNGG 4 cut(s) 513, 1142, 1286, 1736
SdaI CCTGCAGG 1 cut(s) 1669
SduI GDGCHC 1 cut(s) 137
SfaNI GCATC 2 cut(s) 748, 817
SfcI CTRYAG 4 cut(s) 584, 1170, 1665, 1754
SfuI TTCGAA 1 cut(s) 1676
SmiMI CAYNNNNRTG 1 cut(s) 1616
SmlI CTYRAG 1 cut(s) 385
SmoI CTYRAG 1 cut(s) 385
Sse8387I CCTGCAGG 1 cut(s) 1669
Sse9I AATT 8 cut(s) 83, 363, 370, 640, 1176, 1209, 1243, 1331
SsiI CCGC 5 cut(s) 191, 887, 982, 1004, 1514
SspI AATATT 1 cut(s) 778
SspMI CTAG 5 cut(s) 452, 605, 852, 1196, 1719
StyD4I CCNGG 4 cut(s) 511, 1140, 1284, 1734
StyI CCWWGG 2 cut(s) 54, 522
TaaI ACNGT 4 cut(s) 109, 564, 602, 1755
TaiI ACGT 2 cut(s) 129, 451
TaqI TCGA 3 cut(s) 1128, 1362, 1676
TasI AATT 8 cut(s) 83, 363, 370, 640, 1176, 1209, 1243, 1331
TatI WGTACW 4 cut(s) 915, 1307, 1477, 1561
TauI GCSGC 2 cut(s) 985, 1516
TfiI GAWTC 2 cut(s) 714, 1678
Tru1I TTAA 4 cut(s) 375, 674, 687, 765
Tru9I TTAA 4 cut(s) 375, 674, 687, 765
TscAI CASTG 3 cut(s) 112, 588, 879
TseFI GTSAC 1 cut(s) 122
TseI GCWGC 7 cut(s) 571, 586, 589, 1169, 1468, 1471, 1585
Tsp45I GTSAC 1 cut(s) 122
TspDTI ATGAA 5 cut(s) 206, 275, 573, 1167, 1389
TspGWI ACGGA 2 cut(s) 146, 262
TspRI CASTG 3 cut(s) 112, 588, 879
Van91I CCANNNNNTGG 1 cut(s) 1235
XagI CCTNNNNNAGG 1 cut(s) 68
XapI RAATTY 3 cut(s) 83, 363, 1243
XbaI TCTAGA 1 cut(s) 451
XceI RCATGY 1 cut(s) 155
XspI CTAG 5 cut(s) 452, 605, 852, 1196, 1719
ZrmI AGTACT 1 cut(s) 1309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.