Rw4G007900

clathrin assembly

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0012345
Physical Location & Seq
Forward (+)
16952176 .. 16956661
4486 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G007900.1

Sequence Viewer

Length: 1761 bp
ATGGGTACATTCTCTGGCTTTAGAAAGGCTTATGGAGCTTTGAAGGACTCTACCAAGGTTGGCCTTATCAAGGTCAACAGCGAATTCAAGGATTTGGATATTGCCACTGTGAAGGCCACAAGTCACGTTGAGTGCCCTCCGAAAGAGCGTCATGTCCGAAAGATTTTCTCTGCAACATCGGTGGTACGCCCGCGAGCAGATGTGGCATATTGCATTCATGCGCTGGGCAAGAGATTGTCCAAGACACGGAGTTGGATTGTTGCCATAAAGACATTGATAGTTATTCATAGGACATTGCGAGAGGGTGATCCTACCTTTCGAGAGGAGCTTCTGAACTATTCTCAGAGGGGACATATGCTCCAAATTTCCAATTTTAAAGACGACTCGAGTCCCCTTGCTTGGGATTGTTCTTCTTGGGTTAGGACATATGCGCTCTTTTTAGAAGAACGTCTAGAATGTTTCCGAGTTTTGAAATATGACATTGAGTCAGAGCGTTTGACCAAAACATCGCCAGGATCAACCAAGGTGCATAGTAGAACACGAATGTTGGGAGCTGATGAACTGTTGGAGCAGCTACCTGCACTGCAGCAACTTCTTTACCGTCTAGTTGGTTGCCAGCCTGAAGGAACAGCTTATAACAATTACCTCATACAATATGCCTTGGCTCTGGTATTAAAAGAGAGCTTTAAAATATATTGTGCCATCAATGATGGAATCATAAATCTAGTAGATATGTTCTTTGATATGCCAAGACACGATGCAGTTAAAGCTCTCAATATTTACAAAAGAGCCGGTCAACAGGCTGAGCATCTTGCTGAGTTTTATGAGTATTGCAAGGGTTTGGATCTTGCTAGAACTTTTCAGTTTCCAACACTGAGACAGCCACCGCCGTCATTTCTTGCAACAATGGAAGAGTACATAAAAGAAGCGCCTCAGTCCGGTGCTGTTCAGAAGAGACTGGAGTACCACGAGACAGAAGAGCGGCCTCAACAACCAGCGCCTCCACCTCCAGAGCCTGAAAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGTTGAGGAACCACCGGAAAAAGTTGAGGAAGAACCCCAACCAAAGGAGGAAGAGGTAGTTGAACCTCCTCCCTTGATCGAAACTGATCTCCTGGGCCTAAATGAAATAAATCCAAGAGCTGCAGAAATTGAAGAAAGCAATGCTCTAGCTCTTGCTATAATTCCAAATGGGACTGAACCACAATCTGGATCAAATTTGAATGATATCGGTGGGACTTCAGGTTGGGAGCTGGCCCTGGTAACCACACCAAGCACCAATACTGGCCCCGTGGTAGATAAAAAATTGGCTGGTGGGTTTGACAAGCTATTACTCGATAGCTTGTATGAAGATGACGGTGCAAGGAGACAGCTACAACTCCAGAATGCAGGATATGGTTATGGCGCGACAAGCCTGCAAAATCCATTTGAACAAGCACAGCAGCAGCCTGTACATGATCCATTTGCAATGTCTAACAGCATAGCGCCTCCTACGAATGTGCAAATGGCACTAATGGCTCAACAACAACACCAAGTACACCAACAGCAACACCAAATGCAGCAACAGTATCAACAACAACAGAACATGATGATGGTACCTCACCCATATTATTCTCAATATCAACAGGCGCAACAACCCGCAGGCCCTTCGAATCCATTTGGAGACCCTTTCAGCTTCCCTCCTCCTTCTTCTAGTGCAATGCCTAACCAAGGAAACCAACACCTACTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANTH

Protein Analysis

586

Amino Acids

66.15

Weight (kDa)

5.27

Isoelectric Point (pI)

60.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANTH PF07651 31 - 309 4.6e-92 ANTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012345)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25940 AT5G57200
fragaria_vesca FvH4_4g07320
malus_domestica MD13G1242200.v1.1 MD16G1249100.v1.1
prunus_persica Prupe.1G075800_v2.0.a1 Prupe.1G076000_v2.0.a1
pyrus_communis pycom13g21390 pycom16g20850
rosa_chinensis RchiOBHm_Chr4g0399681
rosa_laevigata RLG00000009247
rosa_multiflora Rmu_co8405013.1_g000001
rosa_roxburghii Rroxscaffold_5G00344590
rosa_rugosa Rorug04G0018100
rosa_samantha Rh4AG095900 Rh4BG093400 Rh4CG104500 Rh4DG088500
rosa_wichuraiana Rw4G007900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 636
Acc36I ACCTGC 1 cut(s) 586
Acc65I GGTACC 1 cut(s) 1624
AccB1I GGYRCC 1 cut(s) 1624
AccB7I CCANNNNNTGG 1 cut(s) 1238
AccBSI CCGCTC 1 cut(s) 982
AccII CGCG 2 cut(s) 193, 1436
AciI CCGC 4 cut(s) 191, 887, 982, 1668
AclWI GGATC 5 cut(s) 302, 523, 852, 1249, 1481
AcsI RAATTY 3 cut(s) 83, 363, 1246
AcuI CTGAAG 2 cut(s) 642, 1254
AfaI GTAC 7 cut(s) 7, 186, 917, 965, 1482, 1566, 1626
AfiI CCNNNNNNNGG 8 cut(s) 70, 246, 399, 400, 938, 1096, 1238, 1739
AgsI TTSAA 7 cut(s) 43, 88, 472, 1115, 1184, 1252, 1460
AhdI GACNNNNNGTC 1 cut(s) 484
AjnI CCWGG 3 cut(s) 511, 1143, 1287
Alw26I GTCTC 5 cut(s) 871, 949, 965, 1390, 1686
AlwI GGATC 5 cut(s) 302, 523, 852, 1249, 1481
AlwNI CAGNNNCTG 1 cut(s) 1016
Ama87I CYCGRG 1 cut(s) 385
AoxI GGCC 7 cut(s) 61, 114, 983, 1147, 1284, 1315, 1672
ApeKI GCWGC 6 cut(s) 571, 586, 1172, 1471, 1474, 1588
ApoI RAATTY 3 cut(s) 83, 363, 1246
Asp718I GGTACC 1 cut(s) 1624
AspLEI GCGC 7 cut(s) 223, 433, 931, 1000, 1436, 1516, 1660
AspS9I GGNCC 4 cut(s) 1147, 1285, 1316, 1673
AsuHPI GGTGA 2 cut(s) 317, 1622
AsuII TTCGAA 1 cut(s) 1679
AvaI CYCGRG 1 cut(s) 385
BaeGI GKGCMC 1 cut(s) 137
BaeI ACNNNNGTAYC 2 cut(s) 947, 980
BanI GGYRCC 1 cut(s) 1624
BauI CACGAG 1 cut(s) 968
BbvI GCAGC 6 cut(s) 583, 598, 1159, 1483, 1486, 1600
BccI CCATC 3 cut(s) 704, 710, 1615
BceAI ACGGC 1 cut(s) 874
BcgI CGANNNNNNTGC 4 cut(s) 1426, 1460, 1659, 1693
BciT130I CCWGG 3 cut(s) 513, 1145, 1289
BcoDI GTCTC 5 cut(s) 871, 949, 965, 1390, 1686
BfaI CTAG 6 cut(s) 452, 605, 725, 852, 1199, 1722
BfmI CTRYAG 3 cut(s) 584, 1173, 1757
BfoI RGCGCY 3 cut(s) 932, 1001, 1517
BfuAI ACCTGC 1 cut(s) 586
BisI GCNGC 7 cut(s) 572, 587, 983, 1173, 1472, 1475, 1589
BlpI GCTNAGC 1 cut(s) 804
BlsI GCNGC 7 cut(s) 573, 588, 984, 1174, 1473, 1476, 1590
Bme1390I CCNGG 3 cut(s) 513, 1145, 1289
BmeRI GACNNNNNGTC 1 cut(s) 484
BmeT110I CYCGRG 1 cut(s) 385
BmgT120I GGNCC 4 cut(s) 1147, 1285, 1316, 1673
BmiI GGNNCC 3 cut(s) 1062, 1318, 1626
BmrFI CCNGG 3 cut(s) 513, 1145, 1289
BmsI GCATC 2 cut(s) 748, 817
BoxI GACNNNNGTC 1 cut(s) 387
BpmI CTGGAG 3 cut(s) 980, 993, 1394
Bpu1102I GCTNAGC 1 cut(s) 804
Bpu14I TTCGAA 1 cut(s) 1679
BsaI GGTCTC 1 cut(s) 1686
BsaJI CCNNGG 7 cut(s) 54, 522, 660, 1144, 1287, 1320, 1738
BsaWI WCCGGW 2 cut(s) 938, 1066
BsaXI ACNNNNNCTCC 2 cut(s) 342, 372
Bsc4I CCNNNNNNNGG 8 cut(s) 70, 246, 399, 400, 938, 1096, 1238, 1739
Bse118I RCCGGY 1 cut(s) 791
Bse1I ACTGG 2 cut(s) 963, 1318
Bse3DI GCAATG 4 cut(s) 293, 1198, 1503, 1734
BseBI CCWGG 3 cut(s) 513, 1145, 1289
BseDI CCNNGG 7 cut(s) 54, 522, 660, 1144, 1287, 1320, 1738
BseLI CCNNNNNNNGG 8 cut(s) 70, 246, 399, 400, 938, 1096, 1238, 1739
BseMI GCAATG 4 cut(s) 293, 1198, 1503, 1734
BseMII CTCAG 5 cut(s) 356, 795, 807, 866, 947
BseNI ACTGG 2 cut(s) 963, 1318
BseRI GAGGAG 3 cut(s) 338, 1110, 1701
BseSI GKGCMC 1 cut(s) 137
BseXI GCAGC 6 cut(s) 583, 598, 1159, 1483, 1486, 1600
BseYI CCCAGC 1 cut(s) 223
BsgI GTGCAG 1 cut(s) 564
Bsh1236I CGCG 2 cut(s) 193, 1436
BshFI GGCC 7 cut(s) 63, 116, 985, 1149, 1286, 1317, 1674
BshNI GGYRCC 1 cut(s) 1624
BsiHKCI CYCGRG 1 cut(s) 385
BsiSI CCGG 3 cut(s) 792, 939, 1067
BslFI GGGAC 4 cut(s) 363, 375, 1237, 1279
BslI CCNNNNNNNGG 8 cut(s) 70, 246, 399, 400, 938, 1096, 1238, 1739
BsmAI GTCTC 5 cut(s) 871, 949, 965, 1390, 1686
BsmFI GGGAC 4 cut(s) 363, 375, 1237, 1279
BsmI GAATGC 2 cut(s) 213, 1420
BsnI GGCC 7 cut(s) 63, 116, 985, 1149, 1286, 1317, 1674
Bso31I GGTCTC 1 cut(s) 1686
BsoBI CYCGRG 1 cut(s) 385
Bsp119I TTCGAA 1 cut(s) 1679
Bsp1286I GDGCHC 1 cut(s) 137
Bsp1407I TGTACA 1 cut(s) 1480
Bsp143I GATC 7 cut(s) 307, 515, 844, 1128, 1138, 1241, 1486
Bsp1720I GCTNAGC 1 cut(s) 804
BspACI CCGC 4 cut(s) 191, 887, 982, 1668
BspANI GGCC 7 cut(s) 63, 116, 985, 1149, 1286, 1317, 1674
BspCNI CTCAG 5 cut(s) 355, 796, 808, 867, 946
BspFNI CGCG 2 cut(s) 193, 1436
BspLI GGNNCC 3 cut(s) 1062, 1318, 1626
BspMAI CTGCAG 2 cut(s) 588, 1177
BspMI ACCTGC 1 cut(s) 586
BspPI GGATC 5 cut(s) 302, 523, 852, 1249, 1481
BspQI GCTCTTC 1 cut(s) 972
BspT104I TTCGAA 1 cut(s) 1679
BspT107I GGYRCC 1 cut(s) 1624
BspTNI GGTCTC 1 cut(s) 1686
BsrBI CCGCTC 1 cut(s) 982
BsrDI GCAATG 4 cut(s) 293, 1198, 1503, 1734
BsrFI RCCGGY 1 cut(s) 791
BsrGI TGTACA 1 cut(s) 1480
BsrI ACTGG 2 cut(s) 963, 1318
BssAI RCCGGY 1 cut(s) 791
BssECI CCNNGG 7 cut(s) 54, 522, 660, 1144, 1287, 1320, 1738
BssMI GATC 7 cut(s) 307, 515, 844, 1128, 1138, 1241, 1486
BssSI CACGAG 1 cut(s) 968
BssT1I CCWWGG 4 cut(s) 54, 522, 660, 1738
Bst2BI CACGAG 1 cut(s) 968
Bst2UI CCWGG 3 cut(s) 513, 1145, 1289
Bst4CI ACNGT 6 cut(s) 109, 564, 602, 1388, 1596, 1758
Bst6I CTCTTC 4 cut(s) 906, 947, 972, 1098
BstAUI TGTACA 1 cut(s) 1480
BstBI TTCGAA 1 cut(s) 1679
BstC8I GCNNGC 6 cut(s) 191, 195, 617, 1284, 1445, 1672
BstDEI CTNAG 5 cut(s) 342, 804, 816, 875, 933
BstDSI CCRYGG 1 cut(s) 1320
BstEII GGTNACC 1 cut(s) 1291
BstENI CCTNNNNNAGG 2 cut(s) 68, 1737
BstFNI CGCG 2 cut(s) 193, 1436
BstH2I RGCGCY 3 cut(s) 932, 1001, 1517
BstHHI GCGC 7 cut(s) 223, 433, 931, 1000, 1436, 1516, 1660
BstKTI GATC 7 cut(s) 310, 518, 847, 1131, 1141, 1244, 1489
BstMAI GTCTC 5 cut(s) 871, 949, 965, 1390, 1686
BstMBI GATC 7 cut(s) 307, 515, 844, 1128, 1138, 1241, 1486
BstMWI GCNNNNNNNGC 5 cut(s) 35, 203, 767, 1440, 1544
BstNI CCWGG 3 cut(s) 513, 1145, 1289
BstPAI GACNNNNGTC 1 cut(s) 387
BstPI GGTNACC 1 cut(s) 1291
BstSCI CCNGG 3 cut(s) 511, 1143, 1287
BstSFI CTRYAG 3 cut(s) 584, 1173, 1757
BstSLI GKGCMC 1 cut(s) 137
BstUI CGCG 2 cut(s) 193, 1436
BstV1I GCAGC 6 cut(s) 583, 598, 1159, 1483, 1486, 1600
BstX2I RGATCY 1 cut(s) 844
BstYI RGATCY 1 cut(s) 844
BsuRI GGCC 7 cut(s) 63, 116, 985, 1149, 1286, 1317, 1674
BtgI CCRYGG 1 cut(s) 1320
BtgZI GCGATG 1 cut(s) 492
BtsI GCAGTG 1 cut(s) 581
BtsIMutI CAGTG 3 cut(s) 105, 581, 872
BveI ACCTGC 1 cut(s) 586
Cac8I GCNNGC 6 cut(s) 191, 195, 617, 1284, 1445, 1672
CaiI CAGNNNCTG 1 cut(s) 1016
CfoI GCGC 7 cut(s) 223, 433, 931, 1000, 1436, 1516, 1660
Cfr10I RCCGGY 1 cut(s) 791
Cfr13I GGNCC 4 cut(s) 1147, 1285, 1316, 1673
CseI GACGC 1 cut(s) 137
Csp6I GTAC 7 cut(s) 6, 185, 916, 964, 1481, 1565, 1625
CspCI CAANNNNNGTGG 2 cut(s) 162, 197
CviAII CATG 4 cut(s) 152, 218, 1484, 1615
CviQI GTAC 7 cut(s) 6, 185, 916, 964, 1481, 1565, 1625
DdeI CTNAG 5 cut(s) 342, 804, 816, 875, 933
DpnI GATC 7 cut(s) 309, 517, 846, 1130, 1140, 1243, 1488
DpnII GATC 7 cut(s) 307, 515, 844, 1128, 1138, 1241, 1486
DraI TTTAAA 2 cut(s) 376, 688
DriI GACNNNNNGTC 1 cut(s) 484
Eam1104I CTCTTC 4 cut(s) 906, 947, 972, 1098
Eam1105I GACNNNNNGTC 1 cut(s) 484
EarI CTCTTC 4 cut(s) 906, 947, 972, 1098
Eco130I CCWWGG 4 cut(s) 54, 522, 660, 1738
Eco31I GGTCTC 1 cut(s) 1686
Eco32I GATATC 1 cut(s) 1258
Eco57I CTGAAG 2 cut(s) 642, 1254
Eco88I CYCGRG 1 cut(s) 385
Eco91I GGTNACC 1 cut(s) 1291
EcoNI CCTNNNNNAGG 2 cut(s) 68, 1737
EcoO109I RGGNCCY 1 cut(s) 1673
EcoO65I GGTNACC 1 cut(s) 1291
EcoRI GAATTC 1 cut(s) 83
EcoRII CCWGG 3 cut(s) 511, 1143, 1287
EcoRV GATATC 1 cut(s) 1258
EcoT14I CCWWGG 4 cut(s) 54, 522, 660, 1738
ErhI CCWWGG 4 cut(s) 54, 522, 660, 1738
FaeI CATG 4 cut(s) 155, 221, 1487, 1618
FaqI GGGAC 4 cut(s) 363, 375, 1237, 1279
FatI CATG 4 cut(s) 151, 217, 1483, 1614
FauI CCCGC 2 cut(s) 198, 1675
FauNDI CATATG 2 cut(s) 354, 427
Fnu4HI GCNGC 7 cut(s) 572, 587, 983, 1173, 1472, 1475, 1589
Fsp4HI GCNGC 7 cut(s) 572, 587, 983, 1173, 1472, 1475, 1589
FspBI CTAG 6 cut(s) 452, 605, 725, 852, 1199, 1722
GlaI GCGC 7 cut(s) 222, 432, 930, 999, 1435, 1515, 1659
GluI GCNGC 7 cut(s) 572, 587, 983, 1173, 1472, 1475, 1589
GsaI CCCAGC 1 cut(s) 227
GsuI CTGGAG 3 cut(s) 980, 993, 1394
HaeII RGCGCY 3 cut(s) 932, 1001, 1517
HaeIII GGCC 7 cut(s) 63, 116, 985, 1149, 1286, 1317, 1674
HapII CCGG 3 cut(s) 792, 939, 1067
HgaI GACGC 1 cut(s) 137
HhaI GCGC 7 cut(s) 223, 433, 931, 1000, 1436, 1516, 1660
Hin1II CATG 4 cut(s) 155, 221, 1487, 1618
Hin6I GCGC 7 cut(s) 221, 431, 929, 998, 1434, 1514, 1658
HinP1I GCGC 7 cut(s) 221, 431, 929, 998, 1434, 1514, 1658
HincII GTYRAC 2 cut(s) 76, 797
HindII GTYRAC 2 cut(s) 76, 797
HinfI GANTC 6 cut(s) 47, 383, 388, 485, 714, 1681
HpaII CCGG 3 cut(s) 792, 939, 1067
HphI GGTGA 2 cut(s) 317, 1622
Hpy166II GTNNAC 3 cut(s) 76, 797, 1567
Hpy188I TCNGA 7 cut(s) 141, 158, 333, 345, 464, 490, 951
Hpy188III TCNNGA 5 cut(s) 320, 452, 1010, 1239, 1411
Hpy8I GTNNAC 3 cut(s) 76, 797, 1567
HpyAV CCTTC 5 cut(s) 37, 106, 617, 1686, 1725
HpyCH4III ACNGT 6 cut(s) 109, 564, 602, 1388, 1596, 1758
HpyCH4IV ACGT 2 cut(s) 126, 448
HpyF10VI GCNNNNNNNGC 5 cut(s) 35, 203, 767, 1440, 1544
HpyF3I CTNAG 5 cut(s) 342, 804, 816, 875, 933
HpySE526I ACGT 2 cut(s) 126, 448
Hsp92II CATG 4 cut(s) 155, 221, 1487, 1618
HspAI GCGC 7 cut(s) 221, 431, 929, 998, 1434, 1514, 1658
KpnI GGTACC 1 cut(s) 1628
Kzo9I GATC 7 cut(s) 307, 515, 844, 1128, 1138, 1241, 1486
LguI GCTCTTC 1 cut(s) 972
LmnI GCTCC 6 cut(s) 35, 325, 363, 551, 568, 1279
Lsp1109I GCAGC 6 cut(s) 583, 598, 1159, 1483, 1486, 1600
LweI GCATC 2 cut(s) 748, 817
MaeI CTAG 6 cut(s) 452, 605, 725, 852, 1199, 1722
MaeII ACGT 2 cut(s) 126, 448
MaeIII GTNAC 2 cut(s) 122, 1291
MalI GATC 7 cut(s) 309, 517, 846, 1130, 1140, 1243, 1488
MbiI CCGCTC 1 cut(s) 982
MboI GATC 7 cut(s) 307, 515, 844, 1128, 1138, 1241, 1486
MflI RGATCY 1 cut(s) 844
MhlI GDGCHC 1 cut(s) 137
MluCI AATT 8 cut(s) 83, 363, 370, 640, 1179, 1212, 1246, 1334
MlyI GAGTC 4 cut(s) 41, 377, 397, 494
MmeI TCCRAC 3 cut(s) 233, 546, 893
MseI TTAA 4 cut(s) 375, 674, 687, 765
MslI CAYNNNNRTG 1 cut(s) 1619
MspI CCGG 3 cut(s) 792, 939, 1067
MspR9I CCNGG 3 cut(s) 513, 1145, 1289
Mva1269I GAATGC 2 cut(s) 213, 1420
MvaI CCWGG 3 cut(s) 513, 1145, 1289
MvnI CGCG 2 cut(s) 193, 1436
MwoI GCNNNNNNNGC 5 cut(s) 35, 203, 767, 1440, 1544
NdeI CATATG 2 cut(s) 354, 427
NdeII GATC 7 cut(s) 307, 515, 844, 1128, 1138, 1241, 1486
NlaIII CATG 4 cut(s) 155, 221, 1487, 1618
NlaIV GGNNCC 3 cut(s) 1062, 1318, 1626
NmuCI GTSAC 1 cut(s) 122
NspV TTCGAA 1 cut(s) 1679
PaeR7I CTCGAG 1 cut(s) 385
PciSI GCTCTTC 1 cut(s) 972
PctI GAATGC 2 cut(s) 213, 1420
PfeI GAWTC 2 cut(s) 714, 1681
PflMI CCANNNNNTGG 1 cut(s) 1238
PkrI GCNGC 7 cut(s) 573, 588, 984, 1174, 1473, 1476, 1590
PleI GAGTC 4 cut(s) 41, 377, 396, 493
PpsI GAGTC 4 cut(s) 41, 377, 396, 493
PshAI GACNNNNGTC 1 cut(s) 387
PsiI TTATAA 1 cut(s) 636
Psp6I CCWGG 3 cut(s) 511, 1143, 1287
PspEI GGTNACC 1 cut(s) 1291
PspFI CCCAGC 1 cut(s) 223
PspGI CCWGG 3 cut(s) 511, 1143, 1287
PspN4I GGNNCC 3 cut(s) 1062, 1318, 1626
PspPI GGNCC 4 cut(s) 1147, 1285, 1316, 1673
PspXI VCTCGAGB 1 cut(s) 385
PstI CTGCAG 2 cut(s) 588, 1177
PstNI CAGNNNCTG 1 cut(s) 1016
PsuI RGATCY 1 cut(s) 844
RsaI GTAC 7 cut(s) 7, 186, 917, 965, 1482, 1566, 1626
RsaNI GTAC 7 cut(s) 6, 185, 916, 964, 1481, 1565, 1625
RseI CAYNNNNRTG 1 cut(s) 1619
SapI GCTCTTC 1 cut(s) 972
SaqAI TTAA 4 cut(s) 375, 674, 687, 765
SatI GCNGC 7 cut(s) 572, 587, 983, 1173, 1472, 1475, 1589
Sau3AI GATC 7 cut(s) 307, 515, 844, 1128, 1138, 1241, 1486
Sau96I GGNCC 4 cut(s) 1147, 1285, 1316, 1673
SchI GAGTC 4 cut(s) 41, 377, 397, 494
ScrFI CCNGG 3 cut(s) 513, 1145, 1289
SduI GDGCHC 1 cut(s) 137
SfaNI GCATC 2 cut(s) 748, 817
SfcI CTRYAG 3 cut(s) 584, 1173, 1757
Sfr274I CTCGAG 1 cut(s) 385
SfuI TTCGAA 1 cut(s) 1679
SlaI CTCGAG 1 cut(s) 385
SmiMI CAYNNNNRTG 1 cut(s) 1619
SmlI CTYRAG 1 cut(s) 385
SmoI CTYRAG 1 cut(s) 385
Sse9I AATT 8 cut(s) 83, 363, 370, 640, 1179, 1212, 1246, 1334
SsiI CCGC 4 cut(s) 191, 887, 982, 1668
SspI AATATT 1 cut(s) 778
SspMI CTAG 6 cut(s) 452, 605, 725, 852, 1199, 1722
StyD4I CCNGG 3 cut(s) 511, 1143, 1287
StyI CCWWGG 4 cut(s) 54, 522, 660, 1738
TaaI ACNGT 6 cut(s) 109, 564, 602, 1388, 1596, 1758
TaiI ACGT 2 cut(s) 129, 451
TaqI TCGA 5 cut(s) 319, 386, 1131, 1365, 1679
TasI AATT 8 cut(s) 83, 363, 370, 640, 1179, 1212, 1246, 1334
TatI WGTACW 3 cut(s) 915, 1480, 1564
TauI GCSGC 1 cut(s) 985
TfiI GAWTC 2 cut(s) 714, 1681
Tru1I TTAA 4 cut(s) 375, 674, 687, 765
Tru9I TTAA 4 cut(s) 375, 674, 687, 765
TscAI CASTG 3 cut(s) 112, 588, 879
TseFI GTSAC 1 cut(s) 122
TseI GCWGC 6 cut(s) 571, 586, 1172, 1471, 1474, 1588
Tsp45I GTSAC 1 cut(s) 122
TspDTI ATGAA 5 cut(s) 206, 275, 573, 1170, 1392
TspGWI ACGGA 1 cut(s) 262
TspRI CASTG 3 cut(s) 112, 588, 879
Van91I CCANNNNNTGG 1 cut(s) 1238
XagI CCTNNNNNAGG 2 cut(s) 68, 1737
XapI RAATTY 3 cut(s) 83, 363, 1246
XbaI TCTAGA 1 cut(s) 451
XhoI CTCGAG 1 cut(s) 385
XspI CTAG 6 cut(s) 452, 605, 725, 852, 1199, 1722
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.