Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011056

Physical Location & Seq

Genomic Coordinates Forward (+)

13893915 .. 13900630

Gene Structure 6716 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G27910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3084 bp

ATGATTATCAAACGGAAATTTAAAACCCAGATACCGAGTTTGGAACGGTGCAAACTCGGTAATGAGTCAAGGAAGAAGAAGAGAAAGTTGAACTTGGGAGGAGGTGGTTACTACTATCCTCTCAATCTTCTCGGAGAAATCGCCGCCGGGATTGTTCCAGGTAATGGACGCAATGGATTCTCTGCTTCCTGGTGCACTGAAGTTACAAAACCTGTTGAGGTGGAAGAGTCATTGTCTAAGAGAAGATCTGATTCCGGTACTGTTAGAGATTCTCCTCCGGCGGAAGTCTCACGTCCACCGCTTGTTCGGACATCTAGGGGAAGAATTCAGGTGCTTCCTTCTCGATTCAATGATTCGGTGCTTGATAATTGGAGGAAGGATAGTAAAAGTGATTGTGATTTGGAGGAAGAAGAAATAGAATGCAGGAATGAGAAAGTTGTTAGTTTTCGGGTTCCTAAAGCTACTAATTTGAAAAGCAAGGAACTTGATAGGAAGAGTAAGTATAGTGCATTGTGTAAAGAAGAAAGGTTTCACGAGCAACATAATGATGAGGCTCGTGCTCGTGTTGATGAGAAGCTTCCGAATAAAAAGGGTACTTTTGGGCCAGAGAACTTCTATTCAGGTGACTTGGTTTGGGCAAAGTCTGGGAGAAATGAGCCGTTTTGGCCGGCTATTGTTATCGATCCAATGACACAAGCACCCGAGCTTGTTTTGCGTTCTTGTATACCCGATGCAGCCTGTGTTGTGTTCTTTGGTCACTCTGGGAACGAGAATGAAAGGGACTATGCATGGGTGAGGAGAGGGATGATCTTCCCTTTTGTGGACTATGTTGCCAGGTTCCAGGAACAGCCTGAACTGCAAGGGTGCAAGCCTGGGAATTTTCAGATGGCATTGGAGGAAGCATTTTTGGCAGATCAGGGATTCACGGAGAAGTTGATGCATGATATTCACTTGGCTGCTGGGAACTCGACTTTTGACGATTCTTTCTACAGATGGATTCAAGAAACTGCGGTCTCAAATCAGGAGCTCAATAACAATGCTCCAAGACAGGGGCTGTTAAAGAAACACAGAAATCCACTAGCATGTGCAGGATGTGAAACAGTCATTTCTTTTGAGATGGCAAAAAAAATGAAAGATCTGATTCCTGGAGATCAATTGTTGTGTAAACCATGTTCAAGGTTAACAAAATCAAAACACATTTGTGGTATATGCAAGAAGATAAGGAATCATTTGGACAATAAAAGCTGGGTGCGCTGTGATGGTTGTAAAGTCCGGATACACGCAGAATGTGACCAAATATCAGATAGGCATTTGAAGGATTTGCGGGAAACAGATTACTACTGTCCTACTTGCAGAGCAAAATTTAACTTTGACCTATCAGATTCAGAAAAACAAAACTCAAAGTCAAAAGTTGCGAAAGGCGATGGTCAGATGGTTCTTCCTGACAAGGTTATTGTTGTATGCGCTGGAGTAGAAGGAGTTTATTTCCCGAGGCTCCATTTAGTGGTATGTAAATGTGGCTCCTGTGGACCTAAAAAGAAAGCCCTTAGCGAATGGGAAAGGCATACCGGATCAAAGTCAAAAAATTGGAAGACCAGTGTGAAAGTCAAAAGCTCGAAGCTGGCACTAGAAGATTGGATGATGAACTTAGCAGAGTTACATGCAAATGCTACTGCAGCTAAAGTTCCTAAACGACCTTCCATAAAGCAGAGAAAGCAGAGATTGCTTGCTTTTCTATCAGAGACATATGAGCCGGTCAATGCGAAGTGGACAACAGAACGATGTGCAGTTTGCAGATGGGTTGAAGATTGGGACTACAACAAGATTATTATCTGCAACAGATGCCAAATAGCAGTGCATCAGGAATGCTATGGCGCTAGACATGTTCGTGATTTCACCTCATGGGTCTGTAAAGCATGCGAGAGACCAGATATCAAGCGGGAGTGTTGCCTCTGCCCTGTAAAAGGAGGTGCATTGAAGCCAACTGATGTGGAAACGTTGTGGGTTCATGTGACATGTGCTTGGTTTCAGCCTGAAGTATGTTTTGCAAGTGAGGAAAAAATGGAACCTGCAGTTGGGATTTTGAGTATTCCATCAACTAATTTTGTGAAGATATGTGTAATATGCAAACAAATACATGGCTCGTGTACTCAGTGTTGCAAGTGTTCTACATACTATCATGCCATGTGTGCCTCCCGAGCTGGTTATAGAATGGAGTTGCACTGCTTGGAGAAAAATGGTCAGCAGATAACAAAGATGGTGTCCTATTGTGCTTATCACAGGGCTCCCAACCCAGATAACGTGTTAATTATACAAACTCCTTCAGGAGCCTTCTCTGCAAAGAGTCTTGTCCAAAACAAGAAGAAAGGTGGTTCCAGGCTTATTTCATTAATCAGAGAAGACGATGAAGCACCTGCAGAGAATACCATTACATGTGATCCATTTTCTGCTGCTCGTTGTCGAGTATTTAAAAGAAAGATCAATAGCAAGAAGAGGATTGAAGAAGAAGCCATTCCTCACCACACAAGGGGACCACGCCATCATGCATCAGCAGCAATCCAAACTTTAAACACATTCAGACATGTGCCAGAAGAACCCAAATCGTTTTCTTCTTTCAGGGAACGACTTCACCACTTGCAGAGGACAGAAATGGATCGGGTCTGCTTTGGGCGATCTGGAATTCATGGATGGGGTCTTTTTGCAAGAAGAAATATCCAAGAAGGAGAAATGGTTCTTGAATACAGAGGGGAACAGGTGAGAGGTAGCATTGCAGACTTGAGAGAAGCACGTTATCGCAGAGTAGGAAAGGATTGCTATCTTTTCAAGATCAGTGAAGAAGTAGTGGTTGATGCTACAGATAAAGGGAATATAGCTCGGCTCATCAATCATTCGTGTACACCAAACTGCTATGCGAGGATTATGAGTGTAGGAGATGAGGAAAGCAGGATTGTCCTGATAGCCAAGGCCAATGTAGCTGTGGGAGAGGAGTTAACGTATGATTACTTATTTGATCCAGACGAGGCAGAGGAACTCAAGGTGCCATGCTTATGTAAAGCCCCTAACTGCAGGAAATTCATGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005911 GO:0008150 GO:0009292 GO:0009294 GO:0009506 GO:0009893 GO:0009987 GO:0010604 GO:0010638 GO:0019222 GO:0030054 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0033043 GO:0033044 GO:0044764 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051569 GO:0051571 GO:0051704 GO:0055044 GO:0060255 GO:0065007 GO:0080090 GO:1902275 GO:1905269 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD PHD_2 PWWP SET zf-HC5HC2H_2

Protein Analysis

1027

Amino Acids

116.74

Weight (kDa)

8.91

Isoelectric Point (pI)

45.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PWWP	PF00855	208 - 301	6.9e-12	PWWP domain
PHD_2	PF13831	607 - 641	2.9e-11	PHD-finger
zf-HC5HC2H_2	PF13832	648 - 760	7.1e-26	PHD-zinc-finger like domain
zf-HC5HC2H	PF13771	670 - 761	1.4e-11	PHD-like zinc-binding domain
SET	PF00856	896 - 1001	1.3e-24	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0011056)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27910 AT5G53430
fragaria_vesca	FvH4_7g31710 FvH4_7g31710
malus_domestica	MD01G1220300.v1.1 MD07G1289800.v1.1
prunus_persica	Prupe.2G311000_v2.0.a1
pyrus_communis	pycom01g22990 pycom07g26250
rosa_chinensis	RchiOBHm_Chr1g0380901
rosa_laevigata	RLG00000026264
rosa_multiflora	Rmu_sc0002962.1_g000020
rosa_roxburghii	Rroxscaffold_4G00278980
rosa_rugosa	Rorug01G0425200 Rorug01G0425300
rosa_samantha	Rh1AG449100 Rh1BG404800 Rh1CG418800 Rh1DG435200
rosa_wichuraiana	Rw1G039150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2422
Acc36I	ACCTGC	2 cut(s)	2077, 2422
AccB1I	GGYRCC	1 cut(s)	3037
AccB7I	CCANNNNNTGG	2 cut(s)	164, 1504
AccI	GTMKAC	1 cut(s)	724
AccIII	TCCGGA	1 cut(s)	1272
AciI	CCGC	6 cut(s)	144, 281, 299, 1010, 1324, 1939
AclI	AACGTT	1 cut(s)	1997
AclWI	GGATC	5 cut(s)	677, 1579, 2432, 2661, 3005
AcoI	YGGCCR	1 cut(s)	665
AcsI	RAATTY	6 cut(s)	17, 324, 877, 1361, 2679, 3071
AcuI	CTGAAG	3 cut(s)	219, 2055, 2307
AfaI	GTAC	4 cut(s)	259, 595, 2149, 2896
AfiI	CCNNNNNNNGG	7 cut(s)	164, 820, 1049, 1504, 1964, 2075, 2527
AflIII	ACRYGT	5 cut(s)	1882, 2015, 2301, 2432, 2581
AjiI	CACGTC	1 cut(s)	293
AjnI	CCWGG	7 cut(s)	157, 188, 833, 840, 871, 1144, 2375
AjuI	GAANNNNNNNTTGG	2 cut(s)	2058, 2090
AleI	CACNNNNGTG	1 cut(s)	1200
AloI	GAACNNNNNNTCC	2 cut(s)	2715, 2747
Alw21I	GWGCWC	3 cut(s)	197, 562, 1029
Alw26I	GTCTC	4 cut(s)	292, 1018, 1736, 1918
Alw44I	GTGCAC	1 cut(s)	193
AlwI	GGATC	5 cut(s)	677, 1579, 2432, 2661, 3005
AlwNI	CAGNNNCTG	1 cut(s)	1054
Ama87I	CYCGRG	3 cut(s)	701, 1489, 2196
Aor13HI	TCCGGA	1 cut(s)	1272
AoxI	GGCC	3 cut(s)	602, 665, 2964
ApaLI	GTGCAC	1 cut(s)	193
ApeKI	GCWGC	5 cut(s)	734, 956, 1676, 2450, 2552
ApoI	RAATTY	6 cut(s)	17, 324, 877, 1361, 2679, 3071
ArsI	GACNNNNNNTTYG	2 cut(s)	2246, 2278
AseI	ATTAAT	1 cut(s)	2390
Asp700I	GAANNNNTTC	4 cut(s)	528, 2511, 2625, 2730
AspLEI	GCGC	3 cut(s)	1254, 1466, 1877
AspS9I	GGNCC	3 cut(s)	602, 1529, 2531
AsuC2I	CCSGG	1 cut(s)	148
AsuHPI	GGTGA	6 cut(s)	635, 805, 1888, 2510, 2621, 2767
AvaI	CYCGRG	3 cut(s)	701, 1489, 2196
AvaII	GGWCC	2 cut(s)	1529, 2531
BaeGI	GKGCMC	1 cut(s)	197
BanI	GGYRCC	1 cut(s)	3037
BanII	GRGCYC	2 cut(s)	1029, 2287
BauI	CACGAG	4 cut(s)	533, 555, 561, 2143
BbsI	GAAGAC	2 cut(s)	1598, 2406
Bbv12I	GWGCWC	3 cut(s)	197, 562, 1029
BbvI	GCAGC	5 cut(s)	746, 943, 1688, 2437, 2564
BceAI	ACGGC	1 cut(s)	643
BciT130I	CCWGG	7 cut(s)	159, 190, 835, 842, 873, 1146, 2377
BciVI	GTATCC	1 cut(s)	1269
BcnI	CCSGG	1 cut(s)	148
BcoDI	GTCTC	4 cut(s)	292, 1018, 1736, 1918
BfaI	CTAG	4 cut(s)	315, 1079, 1628, 1878
BfmI	CTRYAG	6 cut(s)	988, 1674, 2070, 2415, 2853, 3064
BfoI	RGCGCY	1 cut(s)	1878
BfuAI	ACCTGC	2 cut(s)	2077, 2422
BfuI	GTATCC	1 cut(s)	1269
BglI	GCCNNNNNGGC	1 cut(s)	664
BglII	AGATCT	2 cut(s)	245, 1135
BisI	GCNGC	6 cut(s)	144, 735, 957, 1677, 2451, 2553
BlsI	GCNGC	6 cut(s)	145, 736, 958, 1678, 2452, 2554
Bme1390I	CCNGG	8 cut(s)	148, 159, 190, 835, 842, 873, 1146, 2377
Bme18I	GGWCC	2 cut(s)	1529, 2531
BmeT110I	CYCGRG	3 cut(s)	701, 1489, 2196
BmgBI	CACGTC	1 cut(s)	293
BmgT120I	GGNCC	3 cut(s)	602, 1529, 2531
BmrFI	CCNGG	8 cut(s)	148, 159, 190, 835, 842, 873, 1146, 2377
BmsI	GCATC	6 cut(s)	721, 927, 1832, 1867, 2555, 2839
BpiI	GAAGAC	2 cut(s)	1598, 2406
BpmI	CTGGAG	2 cut(s)	1167, 1488
Bpu10I	CCTNAGC	1 cut(s)	1547
BpuEI	CTTGAG	2 cut(s)	2797, 3017
BpuMI	CCSGG	1 cut(s)	148
Bsa29I	ATCGAT	1 cut(s)	681
BsaBI	GATNNNNATC	2 cut(s)	1829, 2814
BsaI	GGTCTC	2 cut(s)	1018, 1918
BsaJI	CCNNGG	3 cut(s)	872, 1490, 2961
BsaWI	WCCGGW	3 cut(s)	254, 1272, 1568
BsaXI	ACNNNNNCTCC	4 cut(s)	2715, 2745, 2978, 3008
Bsc4I	CCNNNNNNNGG	7 cut(s)	164, 820, 1049, 1504, 1964, 2075, 2527
Bse118I	RCCGGY	2 cut(s)	667, 1753
Bse1I	ACTGG	1 cut(s)	1596
Bse3DI	GCAATG	2 cut(s)	178, 2766
Bse8I	GATNNNNATC	2 cut(s)	1829, 2814
BseAI	TCCGGA	1 cut(s)	1272
BseBI	CCWGG	7 cut(s)	159, 190, 835, 842, 873, 1146, 2377
BseCI	ATCGAT	1 cut(s)	681
BseDI	CCNNGG	3 cut(s)	872, 1490, 2961
BseGI	GGATG	4 cut(s)	810, 1097, 1644, 2693
BseJI	GATNNNNATC	2 cut(s)	1829, 2814
BseLI	CCNNNNNNNGG	7 cut(s)	164, 820, 1049, 1504, 1964, 2075, 2527
BseMI	GCAATG	2 cut(s)	178, 2766
BseMII	CTCAG	1 cut(s)	2165
BseNI	ACTGG	1 cut(s)	1596
BseRI	GAGGAG	4 cut(s)	114, 264, 811, 2999
BseSI	GKGCMC	1 cut(s)	197
BseXI	GCAGC	5 cut(s)	746, 943, 1688, 2437, 2564
BseYI	CCCAGC	2 cut(s)	959, 1245
BsgI	GTGCAG	2 cut(s)	1107, 1806
BshFI	GGCC	3 cut(s)	604, 667, 2966
BshNI	GGYRCC	1 cut(s)	3037
BshVI	ATCGAT	1 cut(s)	681
BsiHKAI	GWGCWC	3 cut(s)	197, 562, 1029
BsiHKCI	CYCGRG	3 cut(s)	701, 1489, 2196
BsiSI	CCGG	7 cut(s)	147, 255, 278, 668, 1273, 1569, 1754
BslFI	GGGAC	3 cut(s)	794, 1826, 2544
BslI	CCNNNNNNNGG	7 cut(s)	164, 820, 1049, 1504, 1964, 2075, 2527
BsmAI	GTCTC	4 cut(s)	292, 1018, 1736, 1918
BsmFI	GGGAC	3 cut(s)	794, 1826, 2544
BsmI	GAATGC	2 cut(s)	425, 1871
BsnI	GGCC	3 cut(s)	604, 667, 2966
Bso31I	GGTCTC	2 cut(s)	1018, 1918
BsoBI	CYCGRG	3 cut(s)	701, 1489, 2196
Bsp1286I	GDGCHC	4 cut(s)	197, 562, 1029, 2287
Bsp13I	TCCGGA	1 cut(s)	1272
Bsp1407I	TGTACA	1 cut(s)	2894
BspACI	CCGC	6 cut(s)	144, 281, 299, 1010, 1324, 1939
BspANI	GGCC	3 cut(s)	604, 667, 2966
BspCNI	CTCAG	1 cut(s)	2164
BspDI	ATCGAT	1 cut(s)	681
BspEI	TCCGGA	1 cut(s)	1272
BspHI	TCATGA	1 cut(s)	3075
BspMAI	CTGCAG	4 cut(s)	1678, 2074, 2419, 3068
BspMI	ACCTGC	2 cut(s)	2077, 2422
BspPI	GGATC	5 cut(s)	677, 1579, 2432, 2661, 3005
BspT107I	GGYRCC	1 cut(s)	3037
BspTNI	GGTCTC	2 cut(s)	1018, 1918
BsrDI	GCAATG	2 cut(s)	178, 2766
BsrFI	RCCGGY	2 cut(s)	667, 1753
BsrGI	TGTACA	1 cut(s)	2894
BsrI	ACTGG	1 cut(s)	1596
BssAI	RCCGGY	2 cut(s)	667, 1753
BssECI	CCNNGG	3 cut(s)	872, 1490, 2961
BssNAI	GTATAC	1 cut(s)	725
BssSI	CACGAG	4 cut(s)	533, 555, 561, 2143
BssT1I	CCWWGG	1 cut(s)	2961
Bst1107I	GTATAC	1 cut(s)	725
Bst2BI	CACGAG	4 cut(s)	533, 555, 561, 2143
Bst2UI	CCWGG	7 cut(s)	159, 190, 835, 842, 873, 1146, 2377
Bst4CI	ACNGT	4 cut(s)	48, 262, 1102, 1343
Bst6I	CTCTTC	4 cut(s)	74, 219, 488, 2486
BstAPI	GCANNNNNTGC	2 cut(s)	1723, 1842
BstAUI	TGTACA	1 cut(s)	2894
BstC8I	GCNNGC	5 cut(s)	669, 869, 1623, 1728, 1918
BstDEI	CTNAG	4 cut(s)	237, 1547, 1648, 2151
BstENI	CCTNNNNNAGG	1 cut(s)	1962
BstF5I	GGATG	4 cut(s)	810, 1097, 1644, 2693
BstH2I	RGCGCY	1 cut(s)	1878
BstHHI	GCGC	3 cut(s)	1254, 1466, 1877
BstMAI	GTCTC	4 cut(s)	292, 1018, 1736, 1918
BstNI	CCWGG	7 cut(s)	159, 190, 835, 842, 873, 1146, 2377
BstNSI	RCATGY	7 cut(s)	1086, 1664, 1886, 1920, 2019, 2436, 2585
BstSCI	CCNGG	8 cut(s)	146, 157, 188, 833, 840, 871, 1144, 2375
BstSFI	CTRYAG	6 cut(s)	988, 1674, 2070, 2415, 2853, 3064
BstSLI	GKGCMC	1 cut(s)	197
BstV1I	GCAGC	5 cut(s)	746, 943, 1688, 2437, 2564
BstV2I	GAAGAC	2 cut(s)	1598, 2406
BstX2I	RGATCY	2 cut(s)	245, 1135
BstYI	RGATCY	2 cut(s)	245, 1135
BstZ17I	GTATAC	1 cut(s)	725
Bsu15I	ATCGAT	1 cut(s)	681
BsuI	GTATCC	1 cut(s)	1269
BsuRI	GGCC	3 cut(s)	604, 667, 2966
BsuTUI	ATCGAT	1 cut(s)	681
BtgZI	GCGATG	1 cut(s)	1437
BtrI	CACGTC	1 cut(s)	293
BtsCI	GGATG	4 cut(s)	810, 1097, 1644, 2693
BtsI	GCAGTG	2 cut(s)	1860, 2221
BtsIMutI	CAGTG	6 cut(s)	195, 1603, 1860, 2159, 2221, 2836
BveI	ACCTGC	2 cut(s)	2077, 2422
Cac8I	GCNNGC	5 cut(s)	669, 869, 1623, 1728, 1918
CaiI	CAGNNNCTG	1 cut(s)	1054
CciI	TCATGA	1 cut(s)	3075
CfoI	GCGC	3 cut(s)	1254, 1466, 1877
Cfr10I	RCCGGY	2 cut(s)	667, 1753
Cfr13I	GGNCC	3 cut(s)	602, 1529, 2531
ClaI	ATCGAT	1 cut(s)	681
CseI	GACGC	1 cut(s)	177
Csp6I	GTAC	4 cut(s)	258, 594, 2148, 2895
CspCI	CAANNNNNGTGG	2 cut(s)	1971, 2006
CviQI	GTAC	4 cut(s)	258, 594, 2148, 2895
DdeI	CTNAG	4 cut(s)	237, 1547, 1648, 2151
DraI	TTTAAA	3 cut(s)	22, 2470, 2568
EaeI	YGGCCR	1 cut(s)	665
Eam1104I	CTCTTC	4 cut(s)	74, 219, 488, 2486
EarI	CTCTTC	4 cut(s)	74, 219, 488, 2486
EciI	GGCGGA	1 cut(s)	296
Ecl136II	GAGCTC	1 cut(s)	1027
Eco130I	CCWWGG	1 cut(s)	2961
Eco24I	GRGCYC	2 cut(s)	1029, 2287
Eco31I	GGTCTC	2 cut(s)	1018, 1918
Eco32I	GATATC	1 cut(s)	1933
Eco47I	GGWCC	2 cut(s)	1529, 2531
Eco53kI	GAGCTC	1 cut(s)	1027
Eco57I	CTGAAG	3 cut(s)	219, 2055, 2307
Eco88I	CYCGRG	3 cut(s)	701, 1489, 2196
EcoICRI	GAGCTC	1 cut(s)	1027
EcoNI	CCTNNNNNAGG	1 cut(s)	1962
EcoRI	GAATTC	2 cut(s)	324, 2679
EcoRII	CCWGG	7 cut(s)	157, 188, 833, 840, 871, 1144, 2375
EcoRV	GATATC	1 cut(s)	1933
EcoT14I	CCWWGG	1 cut(s)	2961
EcoT22I	ATGCAT	3 cut(s)	790, 942, 2548
EcoT38I	GRGCYC	2 cut(s)	1029, 2287
ErhI	CCWWGG	1 cut(s)	2961
FalI	AAGNNNNNCTT	2 cut(s)	77, 109
FaqI	GGGAC	3 cut(s)	794, 1826, 2544
FauI	CCCGC	2 cut(s)	1317, 1932
FauNDI	CATATG	1 cut(s)	1747
FblI	GTMKAC	1 cut(s)	724
Fnu4HI	GCNGC	6 cut(s)	144, 735, 957, 1677, 2451, 2553
FokI	GGATG	4 cut(s)	817, 1104, 1651, 2700
FriOI	GRGCYC	2 cut(s)	1029, 2287
Fsp4HI	GCNGC	6 cut(s)	144, 735, 957, 1677, 2451, 2553
FspBI	CTAG	4 cut(s)	315, 1079, 1628, 1878
GlaI	GCGC	3 cut(s)	1253, 1465, 1876
GluI	GCNGC	6 cut(s)	144, 735, 957, 1677, 2451, 2553
GsaI	CCCAGC	2 cut(s)	963, 1249
GsuI	CTGGAG	2 cut(s)	1167, 1488
HaeII	RGCGCY	1 cut(s)	1878
HaeIII	GGCC	3 cut(s)	604, 667, 2966
HapII	CCGG	7 cut(s)	147, 255, 278, 668, 1273, 1569, 1754
HgaI	GACGC	1 cut(s)	177
HhaI	GCGC	3 cut(s)	1254, 1466, 1877
Hin6I	GCGC	3 cut(s)	1252, 1464, 1875
HinP1I	GCGC	3 cut(s)	1252, 1464, 1875
HincII	GTYRAC	2 cut(s)	1182, 2991
HindII	GTYRAC	2 cut(s)	1182, 2991
HindIII	AAGCTT	1 cut(s)	575
HpaI	GTTAAC	2 cut(s)	1182, 2991
HpaII	CCGG	7 cut(s)	147, 255, 278, 668, 1273, 1569, 1754
HphI	GGTGA	6 cut(s)	635, 805, 1888, 2510, 2621, 2767
HpyAV	CCTTC	8 cut(s)	348, 370, 1309, 1469, 1707, 2331, 2341, 2714
HpyCH4III	ACNGT	4 cut(s)	48, 262, 1102, 1343
HpyCH4IV	ACGT	5 cut(s)	292, 1997, 2301, 2788, 2993
HpyF3I	CTNAG	4 cut(s)	237, 1547, 1648, 2151
HpySE526I	ACGT	5 cut(s)	292, 1997, 2301, 2788, 2993
HspAI	GCGC	3 cut(s)	1252, 1464, 1875
Kpn2I	TCCGGA	1 cut(s)	1272
KroI	GCCGGC	1 cut(s)	667
KroNI	GCCGGC	1 cut(s)	669
KspAI	GTTAAC	2 cut(s)	1182, 2991
LmnI	GCTCC	6 cut(s)	1024, 1045, 1500, 1526, 2290, 2327
Lsp1109I	GCAGC	5 cut(s)	746, 943, 1688, 2437, 2564
LweI	GCATC	6 cut(s)	721, 927, 1832, 1867, 2555, 2839
MaeI	CTAG	4 cut(s)	315, 1079, 1628, 1878
MaeII	ACGT	5 cut(s)	292, 1997, 2301, 2788, 2993
MaeIII	GTNAC	7 cut(s)	107, 202, 623, 755, 1289, 1656, 2011
MfeI	CAATTG	1 cut(s)	1154
MflI	RGATCY	2 cut(s)	245, 1135
MhlI	GDGCHC	4 cut(s)	197, 562, 1029, 2287
MlyI	GAGTC	3 cut(s)	74, 236, 2353
Mph1103I	ATGCAT	3 cut(s)	790, 942, 2548
MroI	TCCGGA	1 cut(s)	1272
MroNI	GCCGGC	1 cut(s)	667
MroXI	GAANNNNTTC	4 cut(s)	528, 2511, 2625, 2730
MseI	TTAA	9 cut(s)	21, 1058, 1181, 1365, 2306, 2390, 2469, 2567, 2990
MslI	CAYNNNNRTG	6 cut(s)	546, 1081, 1200, 1665, 1887, 3046
MspI	CCGG	7 cut(s)	147, 255, 278, 668, 1273, 1569, 1754
MspR9I	CCNGG	8 cut(s)	148, 159, 190, 835, 842, 873, 1146, 2377
MunI	CAATTG	1 cut(s)	1154
Mva1269I	GAATGC	2 cut(s)	425, 1871
MvaI	CCWGG	7 cut(s)	159, 190, 835, 842, 873, 1146, 2377
NaeI	GCCGGC	1 cut(s)	669
NciI	CCSGG	1 cut(s)	148
NdeI	CATATG	1 cut(s)	1747
NgoMIV	GCCGGC	1 cut(s)	667
NmeAIII	GCCGAG	1 cut(s)	2854
NmuCI	GTSAC	4 cut(s)	623, 755, 1289, 2011
NsiI	ATGCAT	3 cut(s)	790, 942, 2548
NspI	RCATGY	7 cut(s)	1086, 1664, 1886, 1920, 2019, 2436, 2585
OliI	CACNNNNGTG	1 cut(s)	1200
PaeI	GCATGC	1 cut(s)	1920
PagI	TCATGA	1 cut(s)	3075
PaqCI	CACCTGC	1 cut(s)	2422
PciI	ACATGT	4 cut(s)	1882, 2015, 2432, 2581
PctI	GAATGC	2 cut(s)	425, 1871
PdiI	GCCGGC	1 cut(s)	669
PdmI	GAANNNNTTC	4 cut(s)	528, 2511, 2625, 2730
PflMI	CCANNNNNTGG	2 cut(s)	164, 1504
PfoI	TCCNGGA	2 cut(s)	840, 1144
PkrI	GCNGC	6 cut(s)	145, 736, 958, 1678, 2452, 2554
PleI	GAGTC	3 cut(s)	73, 235, 2352
PpsI	GAGTC	3 cut(s)	73, 235, 2352
PscI	ACATGT	4 cut(s)	1882, 2015, 2432, 2581
PshBI	ATTAAT	1 cut(s)	2390
Psp124BI	GAGCTC	1 cut(s)	1029
Psp1406I	AACGTT	1 cut(s)	1997
Psp6I	CCWGG	7 cut(s)	157, 188, 833, 840, 871, 1144, 2375
PspFI	CCCAGC	2 cut(s)	959, 1245
PspGI	CCWGG	7 cut(s)	157, 188, 833, 840, 871, 1144, 2375
PspPI	GGNCC	3 cut(s)	602, 1529, 2531
PsrI	GAACNNNNNNTAC	2 cut(s)	1156, 1188
PstI	CTGCAG	4 cut(s)	1678, 2074, 2419, 3068
PstNI	CAGNNNCTG	1 cut(s)	1054
PsuI	RGATCY	2 cut(s)	245, 1135
RsaI	GTAC	4 cut(s)	259, 595, 2149, 2896
RsaNI	GTAC	4 cut(s)	258, 594, 2148, 2895
RseI	CAYNNNNRTG	6 cut(s)	546, 1081, 1200, 1665, 1887, 3046
SacI	GAGCTC	1 cut(s)	1029
SaqAI	TTAA	9 cut(s)	21, 1058, 1181, 1365, 2306, 2390, 2469, 2567, 2990
SatI	GCNGC	6 cut(s)	144, 735, 957, 1677, 2451, 2553
Sau96I	GGNCC	3 cut(s)	602, 1529, 2531
SchI	GAGTC	3 cut(s)	74, 236, 2353
ScrFI	CCNGG	8 cut(s)	148, 159, 190, 835, 842, 873, 1146, 2377
SduI	GDGCHC	4 cut(s)	197, 562, 1029, 2287
SfaNI	GCATC	6 cut(s)	721, 927, 1832, 1867, 2555, 2839
SfcI	CTRYAG	6 cut(s)	988, 1674, 2070, 2415, 2853, 3064
SinI	GGWCC	2 cut(s)	1529, 2531
SmiMI	CAYNNNNRTG	6 cut(s)	546, 1081, 1200, 1665, 1887, 3046
SmlI	CTYRAG	2 cut(s)	2776, 3032
SmoI	CTYRAG	2 cut(s)	2776, 3032
SphI	GCATGC	1 cut(s)	1920
SsiI	CCGC	6 cut(s)	144, 281, 299, 1010, 1324, 1939
SspMI	CTAG	4 cut(s)	315, 1079, 1628, 1878
SstI	GAGCTC	1 cut(s)	1029
StyD4I	CCNGG	8 cut(s)	146, 157, 188, 833, 840, 871, 1144, 2375
StyI	CCWWGG	1 cut(s)	2961
TaaI	ACNGT	4 cut(s)	48, 262, 1102, 1343
TaiI	ACGT	5 cut(s)	295, 2000, 2304, 2791, 2996
TaqI	TCGA	5 cut(s)	343, 681, 968, 1616, 2461
TatI	WGTACW	2 cut(s)	2147, 2894
TauI	GCSGC	1 cut(s)	146
Tru1I	TTAA	9 cut(s)	21, 1058, 1181, 1365, 2306, 2390, 2469, 2567, 2990
Tru9I	TTAA	9 cut(s)	21, 1058, 1181, 1365, 2306, 2390, 2469, 2567, 2990
TscAI	CASTG	6 cut(s)	202, 1603, 1860, 2159, 2228, 2836
TseFI	GTSAC	4 cut(s)	623, 755, 1289, 2011
TseI	GCWGC	5 cut(s)	734, 956, 1676, 2450, 2552
Tsp45I	GTSAC	4 cut(s)	623, 755, 1289, 2011
TspDTI	ATGAA	8 cut(s)	789, 1145, 1658, 1997, 2376, 2421, 2672, 3064
TspGWI	ACGGA	2 cut(s)	28, 941
TspRI	CASTG	6 cut(s)	202, 1603, 1860, 2159, 2228, 2836
Van91I	CCANNNNNTGG	2 cut(s)	164, 1504
VneI	GTGCAC	1 cut(s)	193
VpaK11BI	GGWCC	2 cut(s)	1529, 2531
VspI	ATTAAT	1 cut(s)	2390
XagI	CCTNNNNNAGG	1 cut(s)	1962
XapI	RAATTY	6 cut(s)	17, 324, 877, 1361, 2679, 3071
XceI	RCATGY	7 cut(s)	1086, 1664, 1886, 1920, 2019, 2436, 2585
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2974
XmiI	GTMKAC	1 cut(s)	724
XmnI	GAANNNNTTC	4 cut(s)	528, 2511, 2625, 2730
XspI	CTAG	4 cut(s)	315, 1079, 1628, 1878
Zsp2I	ATGCAT	3 cut(s)	790, 942, 2548

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.