RchiOBHm_Chr1g0380901
ERF Family

Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX MLL subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0011056
Physical Location & Seq
Forward (+)
66360305 .. 66366214
5910 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60412

Sequence Viewer

Length: 2334 bp
ATGTTTTTCGGTTACTCTGGGAATGAGAACCAAAGGGATTATGCCTGGGTTAAAAGGGGATCACTTTTTCCATTTATGGATTATATAGACAGGTTTCGAGAGCAGTCTGAACTGGGCAACTGCAAGCCCTGTGATTTCCAGATGGCAACTGAGGAGGCATTTTTGGTGGATCAAGGGTTTACTGAGAAGTTGATAGCAGATATAAACATGGCAGCTGGGAACCCAGTGTATGATGAATCCGTACTTAGAGGAGTTCAAGAGGCTACTGGTTCAAATCATGATCTCGACTATCAGTTTGTGGACCAGGACATCTATCGGAAGAAGAAAGATGCAAGAGTCTGTGAAGGCTGTGGCTCGGATCTTAGAATGCCAAAGAAAATGAAGGTTTCAACTTCTGGAGGGCAATTCCTTTGTAAATCATGTGCTAAGTTAACAAAACATGTTTGTGGCATATGCAAGAAGTGGAATCAGCCTGACAGTGGAAGTTGGGTCCGGTGTGATGGTTGCAGGGTATGGGTGCATGCAGAATGTGATAGAATTAACACCAATTATTATAAGAATTTGGGGGGCACTGATTATTTCTGCCCTCCTTGCAAAGTAAAGTTTAACTTTGAATTGTCAGATTCTGAAAAGGAGCAACCAAAAGTCAAGTGTAGATCTACTAAAAATGAGGCACAACTGGTGCTGCCTAACAAGGTTACTGTTCTCTGTAACGGTGTGGAAGGCATATATTTTCCAAGTCTTCACTCTGTTGTGTGCAAGTGTGGGTACTGTGGGACAGAAAAGCAAGCGCTTAGTGAATGGGAGCGACACACAGGTTCCAAGTCCAGAAATTGGAGGACTAGTGTCAGAGTTAAAGGCTCCTTACTGGCACTGGAACAATGGATGCTGCAGTTAGCAGAGTTTCATGAAAATGCTCTTGTGTCTATTAAACCACCTAAACGACCTTCTATTAAAGAACGGAAGCAAAAATTGCTCACTTTTTTGCAAGAAAAGTATGAACCCGTTTATGCGAAGTGGACAACAGAGCGATGTGCTGTATGTAGATGGGTTGAAGACTGGGACTACAACAAAATCATCATATGCAACAGATGTCAAATAGCTGTTCATCAAGAATGCTATGGAGCAAGACATGTCCGGGATTTCACTTCATGGGTTTGCAAATCATGTGAAACACCAGAAGTCAAGAGAGAATGTTGCCTCTGTCCTGTTAAAGGAGGTGCTTTAAAGCCAACTGATATTGAGACATTGTGGGTTCATATTACATGCGCTTGGTTCAGACCTGAAGTGTCGTTTGCAAGTGATGAGAAGATGGAGCCTGCTCTTGGTATCTTGAGTATTCCATCAAATTCTTTTGTCAAGATTTGTGTAATCTGTAAGCAAATTCATGGTTCATGCACACAATGTAGCAGGTGCTCCACTTATTACCATGCAATGTGTGCATCCAGGGCAGGGTACCGCATGGAGTTGCACTCTTTAGAGAAAAATGGGAAACAGATTACAAAAATGGTTTCCTATTGCGCTTATCACAGGGCTCCAAATCCAGATACGGTCTTAATTATACAGACTCCTCTAGGAGTGTTTTCAGCCAAAAGCCTTCTCCAAAGTAAGAAGAGGCCTGGTTCAAGGCTAATTTCATCTAATAGAATTAAGTTGGAAGAGGTTCCAACTGTTGAAACGACTGAACCTGAGCCATTATCTTCTGCAAGGTGCCGAATATTTAAAAGATTGAAAGATAGTAGGAAGAGAACAGAAGAAGAAGCTGTTGCCCACCAAGTGATGGGACATTCCCATCATCCCTTGGAAGCAATTCGAAGTTTGAACAAATTCAGAGTAGTAGAGGAACCTCTAACTTTTTCATCTTTTAGAGAACGGCTTTACCATTTACAGAGAACCGAAAAAGATCGTGTTTGCTTTGGTAGATCCGGGATACATGGATGGGGTCTCTTTGCACGTAGAAACATTCAAGAAGGAGAAATGGTCCTTGAATACCGTGGTGAACAGGTGAGGCGTAGTATTGCAGATTTGAGGGAGGCACGATATAGATCAGAAGGCAAAGACTGTTACCTTTTTAAGATTAGCGAAGAAGTGGTAGTAGATGCCACCGATAAAGGAAATATAGCACGGCTGATCAATCATTCGTGCATGCCCAATTGTTATGCGAGGATCATGAGTGTTGGTGATGAGGAAAGCCGGATTGTACTTATTGCAAAGACTAATGTATCTGCGGGTGACGAGCTAACGTATGATTACTTGTTTGATCCAAATGAGCCTGATGAATTCAAAGTTCCTTGTCTATGTAAAGCTCCCAACTGCCGGAAATTCATGAATTAG

Protein Analysis

777

Amino Acids

89.12

Weight (kDa)

8.67

Isoelectric Point (pI)

45.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHD PF00628 149 - 198 1.6e-07 PHD-finger
PHD_2 PF13831 357 - 391 4.6e-11 PHD-finger
zf-HC5HC2H_2 PF13832 398 - 510 6.3e-28 PHD-zinc-finger like domain
zf-HC5HC2H PF13771 420 - 511 2e-13 PHD-like zinc-binding domain
SET PF00856 646 - 751 4.8e-25 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27910 AT5G53430
fragaria_vesca FvH4_7g31710 FvH4_7g31710
malus_domestica MD01G1220300.v1.1 MD07G1289800.v1.1
prunus_persica Prupe.2G311000_v2.0.a1
pyrus_communis pycom01g22990 pycom07g26250
rosa_chinensis RchiOBHm_Chr1g0380901
rosa_laevigata RLG00000026264
rosa_multiflora Rmu_sc0002962.1_g000020
rosa_roxburghii Rroxscaffold_4G00278980
rosa_rugosa Rorug01G0425200 Rorug01G0425300
rosa_samantha Rh1AG449100 Rh1BG404800 Rh1CG418800 Rh1DG435200
rosa_wichuraiana Rw1G039150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 555
AarI CACCTGC 1 cut(s) 1401
Acc36I ACCTGC 1 cut(s) 1401
Acc65I GGTACC 1 cut(s) 1455
AccB1I GGYRCC 2 cut(s) 1455, 1710
AccB7I CCANNNNNTGG 2 cut(s) 834, 1780
AciI CCGC 2 cut(s) 1459, 2228
AclWI GGATC 6 cut(s) 67, 177, 366, 1917, 2174, 2255
AcsI RAATTY 6 cut(s) 559, 1348, 1383, 1826, 2279, 2321
AcuI CTGAAG 1 cut(s) 1305
AdeI CACNNNGTG 1 cut(s) 1777
AfaI GTAC 4 cut(s) 243, 770, 1457, 2202
AfeI AGCGCT 1 cut(s) 792
AfiI CCNNNNNNNGG 7 cut(s) 479, 834, 1214, 1325, 1452, 1780, 2316
AflIII ACRYGT 2 cut(s) 439, 1132
AhlI ACTAGT 1 cut(s) 842
AjnI CCWGG 4 cut(s) 44, 303, 1445, 1618
AluBI AGCT 5 cut(s) 215, 1103, 1763, 2239, 2306
AluI AGCT 5 cut(s) 215, 1103, 1763, 2239, 2306
Alw21I GWGCWC 1 cut(s) 1418
Alw26I GTCTC 2 cut(s) 1238, 1949
AlwI GGATC 6 cut(s) 67, 177, 366, 1917, 2174, 2255
AlwNI CAGNNNCTG 1 cut(s) 626
Aor51HI AGCGCT 1 cut(s) 792
AoxI GGCC 1 cut(s) 1616
ApeKI GCWGC 3 cut(s) 212, 685, 889
ApoI RAATTY 6 cut(s) 559, 1348, 1383, 1826, 2279, 2321
ArsI GACNNNNNNTTYG 2 cut(s) 278, 310
Asp700I GAANNNNTTC 3 cut(s) 1662, 1809, 1826
Asp718I GGTACC 1 cut(s) 1455
AspLEI GCGC 3 cut(s) 793, 1271, 1523
AspS9I GGNCC 3 cut(s) 301, 490, 1981
AsuC2I CCSGG 2 cut(s) 1139, 1927
AsuHPI GGTGA 4 cut(s) 2009, 2017, 2192, 2243
AsuII TTCGAA 1 cut(s) 1813
AvaII GGWCC 3 cut(s) 301, 490, 1981
BaeGI GKGCMC 1 cut(s) 572
BaeI ACNNNNGTAYC 2 cut(s) 2205, 2238
BanI GGYRCC 2 cut(s) 1455, 1710
BanII GRGCYC 1 cut(s) 1537
BbsI GAAGAC 2 cut(s) 734, 1062
Bbv12I GWGCWC 1 cut(s) 1418
BbvI GCAGC 3 cut(s) 224, 672, 876
BccI CCATC 8 cut(s) 136, 494, 1041, 1306, 1351, 1774, 1800, 1932
BceAI ACGGC 2 cut(s) 1889, 2141
BciT130I CCWGG 4 cut(s) 46, 305, 1447, 1620
BciVI GTATCC 1 cut(s) 1923
BclI TGATCA 1 cut(s) 2130
BcnI CCSGG 2 cut(s) 1139, 1927
BcoDI GTCTC 2 cut(s) 1238, 1949
BcuI ACTAGT 1 cut(s) 842
BfaI CTAG 2 cut(s) 843, 1574
BfmI CTRYAG 1 cut(s) 890
BfoI RGCGCY 1 cut(s) 794
BfuAI ACCTGC 1 cut(s) 1401
BfuI GTATCC 1 cut(s) 1923
BglII AGATCT 1 cut(s) 656
BisI GCNGC 3 cut(s) 213, 686, 890
BlsI GCNGC 3 cut(s) 214, 687, 891
Bme1390I CCNGG 6 cut(s) 46, 305, 1139, 1447, 1620, 1927
Bme18I GGWCC 3 cut(s) 301, 490, 1981
BmgT120I GGNCC 3 cut(s) 301, 490, 1981
BmrFI CCNGG 6 cut(s) 46, 305, 1139, 1447, 1620, 1927
BmrI ACTGGG 3 cut(s) 122, 218, 1069
BmsI GCATC 4 cut(s) 319, 876, 1451, 2089
BmuI ACTGGG 3 cut(s) 122, 218, 1069
BoxI GACNNNNGTC 1 cut(s) 845
BpiI GAAGAC 2 cut(s) 734, 1062
BplI GAGNNNNNCTC 2 cut(s) 1457, 1489
BpmI CTGGAG 1 cut(s) 417
Bpu10I CCTNAGC 1 cut(s) 1689
Bpu14I TTCGAA 1 cut(s) 1813
BpuEI CTTGAG 1 cut(s) 1354
BpuMI CCSGG 2 cut(s) 1139, 1927
BsaAI YACGTR 1 cut(s) 1955
BsaBI GATNNNNATC 1 cut(s) 2044
BsaI GGTCTC 1 cut(s) 1949
BsaJI CCNNGG 4 cut(s) 45, 1446, 1800, 1993
BsaWI WCCGGW 1 cut(s) 492
BsaXI ACNNNNNCTCC 4 cut(s) 829, 859, 1965, 1995
Bsc4I CCNNNNNNNGG 7 cut(s) 479, 834, 1214, 1325, 1452, 1780, 2316
Bse1I ACTGG 7 cut(s) 117, 224, 271, 684, 873, 879, 1064
Bse3DI GCAATG 1 cut(s) 1440
Bse8I GATNNNNATC 1 cut(s) 2044
BseBI CCWGG 4 cut(s) 46, 305, 1447, 1620
BseDI CCNNGG 4 cut(s) 45, 1446, 1800, 1993
BseGI GGATG 4 cut(s) 891, 1442, 1795, 1943
BseJI GATNNNNATC 1 cut(s) 2044
BseLI CCNNNNNNNGG 7 cut(s) 479, 834, 1214, 1325, 1452, 1780, 2316
BseMI GCAATG 1 cut(s) 1440
BseMII CTCAG 3 cut(s) 141, 174, 1680
BseNI ACTGG 7 cut(s) 117, 224, 271, 684, 873, 879, 1064
BseRI GAGGAG 3 cut(s) 167, 264, 1560
BseSI GKGCMC 1 cut(s) 572
BseXI GCAGC 3 cut(s) 224, 672, 876
BseYI CCCAGC 1 cut(s) 215
BshFI GGCC 1 cut(s) 1618
BshNI GGYRCC 2 cut(s) 1455, 1710
BsiHKAI GWGCWC 1 cut(s) 1418
BsiSI CCGG 5 cut(s) 493, 1138, 1926, 2194, 2317
BslFI GGGAC 3 cut(s) 790, 1076, 1797
BslI CCNNNNNNNGG 7 cut(s) 479, 834, 1214, 1325, 1452, 1780, 2316
BsmAI GTCTC 2 cut(s) 1238, 1949
BsmFI GGGAC 3 cut(s) 790, 1076, 1797
BsmI GAATGC 2 cut(s) 372, 1121
BsnI GGCC 1 cut(s) 1618
Bso31I GGTCTC 1 cut(s) 1949
Bsp119I TTCGAA 1 cut(s) 1813
Bsp1286I GDGCHC 3 cut(s) 572, 1418, 1537
BspACI CCGC 2 cut(s) 1459, 2228
BspANI GGCC 1 cut(s) 1618
BspCNI CTCAG 3 cut(s) 142, 175, 1681
BspHI TCATGA 4 cut(s) 277, 907, 2169, 2325
BspMAI CTGCAG 1 cut(s) 894
BspMI ACCTGC 1 cut(s) 1401
BspPI GGATC 6 cut(s) 67, 177, 366, 1917, 2174, 2255
BspT104I TTCGAA 1 cut(s) 1813
BspT107I GGYRCC 2 cut(s) 1455, 1710
BspTNI GGTCTC 1 cut(s) 1949
BsrDI GCAATG 1 cut(s) 1440
BsrI ACTGG 7 cut(s) 117, 224, 271, 684, 873, 879, 1064
BssECI CCNNGG 4 cut(s) 45, 1446, 1800, 1993
BssT1I CCWWGG 1 cut(s) 1800
Bst2UI CCWGG 4 cut(s) 46, 305, 1447, 1620
Bst4CI ACNGT 8 cut(s) 479, 703, 716, 773, 1552, 1672, 1994, 2063
Bst6I CTCTTC 3 cut(s) 1607, 1653, 1739
BstAPI GCANNNNNTGC 2 cut(s) 973, 1439
BstBAI YACGTR 1 cut(s) 1955
BstBI TTCGAA 1 cut(s) 1813
BstC8I GCNNGC 5 cut(s) 125, 522, 789, 1320, 2147
BstDEI CTNAG 7 cut(s) 150, 183, 245, 362, 426, 794, 1689
BstDSI CCRYGG 1 cut(s) 1993
BstENI CCTNNNNNAGG 1 cut(s) 1212
BstF5I GGATG 4 cut(s) 891, 1442, 1795, 1943
BstH2I RGCGCY 1 cut(s) 794
BstHHI GCGC 3 cut(s) 793, 1271, 1523
BstMAI GTCTC 2 cut(s) 1238, 1949
BstMWI GCNNNNNNNGC 4 cut(s) 591, 973, 1439, 1448
BstNI CCWGG 4 cut(s) 46, 305, 1447, 1620
BstNSI RCATGY 5 cut(s) 443, 524, 1136, 1269, 2149
BstPAI GACNNNNGTC 1 cut(s) 845
BstSCI CCNGG 6 cut(s) 44, 303, 1137, 1445, 1618, 1925
BstSFI CTRYAG 1 cut(s) 890
BstSLI GKGCMC 1 cut(s) 572
BstV1I GCAGC 3 cut(s) 224, 672, 876
BstV2I GAAGAC 2 cut(s) 734, 1062
BstX2I RGATCY 3 cut(s) 358, 656, 1922
BstYI RGATCY 3 cut(s) 358, 656, 1922
BsuI GTATCC 1 cut(s) 1923
BsuRI GGCC 1 cut(s) 1618
BtgI CCRYGG 1 cut(s) 1993
BtgZI GCGATG 1 cut(s) 1045
BtsCI GGATG 4 cut(s) 891, 1442, 1795, 1943
BtsIMutI CAGTG 4 cut(s) 231, 484, 570, 872
BveI ACCTGC 1 cut(s) 1401
Cac8I GCNNGC 5 cut(s) 125, 522, 789, 1320, 2147
CaiI CAGNNNCTG 1 cut(s) 626
CciI TCATGA 4 cut(s) 277, 907, 2169, 2325
CfoI GCGC 3 cut(s) 793, 1271, 1523
Cfr13I GGNCC 3 cut(s) 301, 490, 1981
Csp6I GTAC 4 cut(s) 242, 769, 1456, 2201
CviQI GTAC 4 cut(s) 242, 769, 1456, 2201
DdeI CTNAG 7 cut(s) 150, 183, 245, 362, 426, 794, 1689
DraI TTTAAA 2 cut(s) 1227, 1723
DraIII CACNNNGTG 1 cut(s) 1777
Eam1104I CTCTTC 3 cut(s) 1607, 1653, 1739
EarI CTCTTC 3 cut(s) 1607, 1653, 1739
Eco130I CCWWGG 1 cut(s) 1800
Eco147I AGGCCT 1 cut(s) 1618
Eco24I GRGCYC 1 cut(s) 1537
Eco31I GGTCTC 1 cut(s) 1949
Eco47I GGWCC 3 cut(s) 301, 490, 1981
Eco47III AGCGCT 1 cut(s) 792
Eco57I CTGAAG 1 cut(s) 1305
EcoNI CCTNNNNNAGG 1 cut(s) 1212
EcoRI GAATTC 1 cut(s) 2279
EcoRII CCWGG 4 cut(s) 44, 303, 1445, 1618
EcoT14I CCWWGG 1 cut(s) 1800
EcoT38I GRGCYC 1 cut(s) 1537
ErhI CCWWGG 1 cut(s) 1800
FalI AAGNNNNNCTT 2 cut(s) 593, 625
FaqI GGGAC 3 cut(s) 790, 1076, 1797
FauI CCCGC 1 cut(s) 2221
FauNDI CATATG 2 cut(s) 452, 1082
FbaI TGATCA 1 cut(s) 2130
Fnu4HI GCNGC 3 cut(s) 213, 686, 890
FokI GGATG 4 cut(s) 898, 1429, 1782, 1950
FriOI GRGCYC 1 cut(s) 1537
Fsp4HI GCNGC 3 cut(s) 213, 686, 890
FspBI CTAG 2 cut(s) 843, 1574
GlaI GCGC 3 cut(s) 792, 1270, 1522
GluI GCNGC 3 cut(s) 213, 686, 890
GsaI CCCAGC 1 cut(s) 219
GsuI CTGGAG 1 cut(s) 417
HaeII RGCGCY 1 cut(s) 794
HaeIII GGCC 1 cut(s) 1618
HapII CCGG 5 cut(s) 493, 1138, 1926, 2194, 2317
HhaI GCGC 3 cut(s) 793, 1271, 1523
Hin6I GCGC 3 cut(s) 791, 1269, 1521
HinP1I GCGC 3 cut(s) 791, 1269, 1521
HincII GTYRAC 1 cut(s) 432
HindII GTYRAC 1 cut(s) 432
HinfI GANTC 5 cut(s) 236, 336, 466, 623, 1567
HpaI GTTAAC 1 cut(s) 432
HpaII CCGG 5 cut(s) 493, 1138, 1926, 2194, 2317
HphI GGTGA 4 cut(s) 2009, 2017, 2192, 2243
Hpy166II GTNNAC 5 cut(s) 180, 301, 432, 1020, 2000
Hpy188I TCNGA 9 cut(s) 109, 318, 358, 622, 628, 851, 1280, 1832, 2050
Hpy8I GTNNAC 5 cut(s) 180, 301, 432, 1020, 2000
HpyAV CCTTC 7 cut(s) 338, 376, 716, 957, 1607, 1964, 2045
HpyCH4III ACNGT 8 cut(s) 479, 703, 716, 773, 1552, 1672, 1994, 2063
HpyCH4IV ACGT 2 cut(s) 1954, 2243
HpyF10VI GCNNNNNNNGC 4 cut(s) 591, 973, 1439, 1448
HpyF3I CTNAG 7 cut(s) 150, 183, 245, 362, 426, 794, 1689
HpySE526I ACGT 2 cut(s) 1954, 2243
HspAI GCGC 3 cut(s) 791, 1269, 1521
KpnI GGTACC 1 cut(s) 1459
Ksp22I TGATCA 1 cut(s) 2130
KspAI GTTAAC 1 cut(s) 432
LmnI GCTCC 8 cut(s) 634, 805, 866, 1124, 1315, 1421, 1540, 2311
Lsp1109I GCAGC 3 cut(s) 224, 672, 876
LweI GCATC 4 cut(s) 319, 876, 1451, 2089
MaeI CTAG 2 cut(s) 843, 1574
MaeII ACGT 2 cut(s) 1954, 2243
MaeIII GTNAC 5 cut(s) 11, 697, 710, 2063, 2231
MfeI CAATTG 1 cut(s) 2152
MflI RGATCY 3 cut(s) 358, 656, 1922
MhlI GDGCHC 3 cut(s) 572, 1418, 1537
MlyI GAGTC 2 cut(s) 345, 1561
MmeI TCCRAC 2 cut(s) 1635, 1691
MroXI GAANNNNTTC 3 cut(s) 1662, 1809, 1826
MslI CAYNNNNRTG 2 cut(s) 444, 912
MspA1I CMGCKG 1 cut(s) 215
MspI CCGG 5 cut(s) 493, 1138, 1926, 2194, 2317
MspR9I CCNGG 6 cut(s) 46, 305, 1139, 1447, 1620, 1927
MunI CAATTG 1 cut(s) 2152
Mva1269I GAATGC 2 cut(s) 372, 1121
MvaI CCWGG 4 cut(s) 46, 305, 1447, 1620
MwoI GCNNNNNNNGC 4 cut(s) 591, 973, 1439, 1448
NciI CCSGG 2 cut(s) 1139, 1927
NdeI CATATG 2 cut(s) 452, 1082
NmuCI GTSAC 1 cut(s) 2231
NspI RCATGY 5 cut(s) 443, 524, 1136, 1269, 2149
NspV TTCGAA 1 cut(s) 1813
PaeI GCATGC 2 cut(s) 524, 2149
PagI TCATGA 4 cut(s) 277, 907, 2169, 2325
PaqCI CACCTGC 1 cut(s) 1401
PceI AGGCCT 1 cut(s) 1618
PciI ACATGT 2 cut(s) 439, 1132
PctI GAATGC 2 cut(s) 372, 1121
PdmI GAANNNNTTC 3 cut(s) 1662, 1809, 1826
PfeI GAWTC 3 cut(s) 236, 466, 623
PflMI CCANNNNNTGG 2 cut(s) 834, 1780
PfoI TCCNGGA 2 cut(s) 1137, 1925
PkrI GCNGC 3 cut(s) 214, 687, 891
PleI GAGTC 2 cut(s) 344, 1561
PpsI GAGTC 2 cut(s) 344, 1561
Ppu21I YACGTR 1 cut(s) 1955
PscI ACATGT 2 cut(s) 439, 1132
PshAI GACNNNNGTC 1 cut(s) 845
PsiI TTATAA 1 cut(s) 555
Psp6I CCWGG 4 cut(s) 44, 303, 1445, 1618
PspFI CCCAGC 1 cut(s) 215
PspGI CCWGG 4 cut(s) 44, 303, 1445, 1618
PspPI GGNCC 3 cut(s) 301, 490, 1981
PstI CTGCAG 1 cut(s) 894
PstNI CAGNNNCTG 1 cut(s) 626
PsuI RGATCY 3 cut(s) 358, 656, 1922
PvuII CAGCTG 1 cut(s) 215
RsaI GTAC 4 cut(s) 243, 770, 1457, 2202
RsaNI GTAC 4 cut(s) 242, 769, 1456, 2201
RseI CAYNNNNRTG 2 cut(s) 444, 912
SatI GCNGC 3 cut(s) 213, 686, 890
Sau96I GGNCC 3 cut(s) 301, 490, 1981
SchI GAGTC 2 cut(s) 345, 1561
ScrFI CCNGG 6 cut(s) 46, 305, 1139, 1447, 1620, 1927
SduI GDGCHC 3 cut(s) 572, 1418, 1537
SfaNI GCATC 4 cut(s) 319, 876, 1451, 2089
SfcI CTRYAG 1 cut(s) 890
SfuI TTCGAA 1 cut(s) 1813
SinI GGWCC 3 cut(s) 301, 490, 1981
SmiMI CAYNNNNRTG 2 cut(s) 444, 912
SmlI CTYRAG 1 cut(s) 1333
SmoI CTYRAG 1 cut(s) 1333
SpeI ACTAGT 1 cut(s) 842
SphI GCATGC 2 cut(s) 524, 2149
SseBI AGGCCT 1 cut(s) 1618
SsiI CCGC 2 cut(s) 1459, 2228
SspI AATATT 1 cut(s) 1719
SspMI CTAG 2 cut(s) 843, 1574
StuI AGGCCT 1 cut(s) 1618
StyD4I CCNGG 6 cut(s) 44, 303, 1137, 1445, 1618, 1925
StyI CCWWGG 1 cut(s) 1800
TaaI ACNGT 8 cut(s) 479, 703, 716, 773, 1552, 1672, 1994, 2063
TaiI ACGT 2 cut(s) 1957, 2246
TaqI TCGA 3 cut(s) 97, 285, 1813
TatI WGTACW 1 cut(s) 2200
TfiI GAWTC 3 cut(s) 236, 466, 623
TscAI CASTG 4 cut(s) 231, 484, 577, 879
TseFI GTSAC 1 cut(s) 2231
TseI GCWGC 3 cut(s) 212, 685, 889
Tsp45I GTSAC 1 cut(s) 2231
TspGWI ACGGA 2 cut(s) 229, 976
TspRI CASTG 4 cut(s) 231, 484, 577, 879
Van91I CCANNNNNTGG 2 cut(s) 834, 1780
VpaK11BI GGWCC 3 cut(s) 301, 490, 1981
XagI CCTNNNNNAGG 1 cut(s) 1212
XapI RAATTY 6 cut(s) 559, 1348, 1383, 1826, 2279, 2321
XceI RCATGY 5 cut(s) 443, 524, 1136, 1269, 2149
XmnI GAANNNNTTC 3 cut(s) 1662, 1809, 1826
XspI CTAG 2 cut(s) 843, 1574
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.