Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX MLL subfamily
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G27910 AT5G53430 |
| fragaria_vesca | FvH4_7g31710 FvH4_7g31710 |
| malus_domestica | MD01G1220300.v1.1 MD07G1289800.v1.1 |
| prunus_persica | Prupe.2G311000_v2.0.a1 |
| pyrus_communis | pycom01g22990 pycom07g26250 |
| rosa_chinensis | RchiOBHm_Chr1g0380901 |
| rosa_laevigata | RLG00000026264 |
| rosa_multiflora | Rmu_sc0002962.1_g000020 |
| rosa_roxburghii | Rroxscaffold_4G00278980 |
| rosa_rugosa | Rorug01G0425200 Rorug01G0425300 |
| rosa_samantha | Rh1AG449100 Rh1BG404800 Rh1CG418800 Rh1DG435200 |
| rosa_wichuraiana | Rw1G039150 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2101 |
| Acc16I | TGCGCA | 1 cut(s) | 2685 |
| Acc36I | ACCTGC | 2 cut(s) | 2101, 2357 |
| AccB1I | GGYRCC | 1 cut(s) | 2625 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2695 |
| AccII | CGCG | 1 cut(s) | 319 |
| AciI | CCGC | 7 cut(s) | 68, 150, 319, 323, 604, 1127, 1257 |
| AclWI | GGATC | 5 cut(s) | 848, 1320, 2252, 3089, 3170 |
| AcoI | YGGCCR | 2 cut(s) | 165, 320 |
| AcsI | RAATTY | 8 cut(s) | 1049, 1458, 1480, 1523, 2263, 2298, 3194, 3236 |
| AdeI | CACNNNGTG | 4 cut(s) | 1712, 2067, 2319, 2692 |
| AfaI | GTAC | 6 cut(s) | 360, 649, 1499, 2795, 3117, 3161 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 253, 355, 491, 1250, 2129, 2240, 2695, 3231 |
| AflIII | ACRYGT | 2 cut(s) | 1331, 2180 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2201 |
| AhlI | ACTAGT | 2 cut(s) | 416, 1757 |
| AjiI | CACGTC | 1 cut(s) | 657 |
| AjnI | CCWGG | 6 cut(s) | 814, 1011, 1209, 1306, 2533, 2715 |
| AleI | CACNNNNGTG | 1 cut(s) | 659 |
| AloI | GAACNNNNNNTCC | 6 cut(s) | 8, 40, 1395, 1427, 2880, 2912 |
| AluBI | AGCT | 8 cut(s) | 470, 474, 639, 877, 1035, 2569, 3154, 3221 |
| AluI | AGCT | 8 cut(s) | 470, 474, 639, 877, 1035, 2569, 3154, 3221 |
| Alw21I | GWGCWC | 4 cut(s) | 230, 245, 641, 2725 |
| Alw26I | GTCTC | 6 cut(s) | 241, 1227, 2153, 2209, 2864, 2868 |
| Alw44I | GTGCAC | 1 cut(s) | 226 |
| AlwI | GGATC | 5 cut(s) | 848, 1320, 2252, 3089, 3170 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1547, 2465 |
| Ama87I | CYCGRG | 2 cut(s) | 88, 248 |
| AoxI | GGCC | 8 cut(s) | 165, 198, 320, 346, 836, 1859, 2235, 2531 |
| ApaLI | GTGCAC | 1 cut(s) | 226 |
| ApeKI | GCWGC | 6 cut(s) | 905, 1035, 1254, 1600, 1804, 2618 |
| ApoI | RAATTY | 8 cut(s) | 1049, 1458, 1480, 1523, 2263, 2298, 3194, 3236 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 22, 54 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 209, 1920, 2741, 2895 |
| AspLEI | GCGC | 5 cut(s) | 871, 1018, 1952, 2686, 2928 |
| AspS9I | GGNCC | 4 cut(s) | 198, 346, 773, 2236 |
| AsuHPI | GGTGA | 6 cut(s) | 83, 343, 806, 2924, 2932, 3158 |
| AsuII | TTCGAA | 1 cut(s) | 2728 |
| AsuNHI | GCTAGC | 1 cut(s) | 470 |
| AvaI | CYCGRG | 2 cut(s) | 88, 248 |
| AvaII | GGWCC | 1 cut(s) | 773 |
| BaeGI | GKGCMC | 2 cut(s) | 230, 734 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2777, 2810 |
| BanI | GGYRCC | 1 cut(s) | 2625 |
| BanII | GRGCYC | 4 cut(s) | 641, 745, 1044, 2452 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2722, 2754 |
| BauI | CACGAG | 1 cut(s) | 238 |
| BbsI | GAAGAC | 6 cut(s) | 113, 164, 299, 786, 1649, 1833 |
| Bbv12I | GWGCWC | 4 cut(s) | 230, 245, 641, 2725 |
| BbvI | GCAGC | 6 cut(s) | 917, 1022, 1241, 1587, 1791, 2605 |
| BccI | CCATC | 9 cut(s) | 442, 755, 1051, 1415, 1956, 2221, 2689, 2715, 2847 |
| BceAI | ACGGC | 4 cut(s) | 321, 1874, 2003, 2804 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 297, 331, 2094, 2128 |
| BciT130I | CCWGG | 6 cut(s) | 816, 1013, 1211, 1308, 2535, 2717 |
| BciVI | GTATCC | 2 cut(s) | 920, 2838 |
| BclI | TGATCA | 1 cut(s) | 3045 |
| BcoDI | GTCTC | 6 cut(s) | 241, 1227, 2153, 2209, 2864, 2868 |
| BcuI | ACTAGT | 2 cut(s) | 416, 1757 |
| BfaI | CTAG | 5 cut(s) | 417, 471, 878, 1758, 2214 |
| BfmI | CTRYAG | 3 cut(s) | 1170, 1805, 2094 |
| BfoI | RGCGCY | 1 cut(s) | 872 |
| BfuAI | ACCTGC | 2 cut(s) | 2101, 2357 |
| BfuI | GTATCC | 2 cut(s) | 920, 2838 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 835 |
| BglII | AGATCT | 2 cut(s) | 2837, 2938 |
| BmcAI | AGTACT | 1 cut(s) | 1499 |
| Bme1390I | CCNGG | 6 cut(s) | 816, 1013, 1211, 1308, 2535, 2717 |
| Bme18I | GGWCC | 1 cut(s) | 773 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2201 |
| BmeT110I | CYCGRG | 2 cut(s) | 88, 248 |
| BmgBI | CACGTC | 1 cut(s) | 657 |
| BmgT120I | GGNCC | 4 cut(s) | 198, 346, 773, 2236 |
| BmrFI | CCNGG | 6 cut(s) | 816, 1013, 1211, 1308, 2535, 2717 |
| BmsI | GCATC | 6 cut(s) | 892, 1791, 1937, 2366, 2665, 3004 |
| BmtI | GCTAGC | 1 cut(s) | 474 |
| BoxI | GACNNNNGTC | 2 cut(s) | 690, 1760 |
| BpiI | GAAGAC | 6 cut(s) | 113, 164, 299, 786, 1649, 1833 |
| Bpu10I | CCTNAGC | 2 cut(s) | 873, 2604 |
| Bpu14I | TTCGAA | 1 cut(s) | 2728 |
| BpuEI | CTTGAG | 1 cut(s) | 2269 |
| BsaAI | YACGTR | 1 cut(s) | 644 |
| BsaI | GGTCTC | 1 cut(s) | 2864 |
| BsaJI | CCNNGG | 7 cut(s) | 249, 815, 1307, 2239, 2715, 2716, 2908 |
| BsaWI | WCCGGW | 1 cut(s) | 3143 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 437, 467, 1744, 1774, 2880, 2910 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 253, 355, 491, 1250, 2129, 2240, 2695, 3231 |
| Bse118I | RCCGGY | 2 cut(s) | 163, 2233 |
| Bse1I | ACTGG | 4 cut(s) | 168, 401, 695, 1794 |
| Bse3DI | GCAATG | 3 cut(s) | 1137, 1633, 2355 |
| BseBI | CCWGG | 6 cut(s) | 816, 1013, 1211, 1308, 2535, 2717 |
| BseDI | CCNNGG | 7 cut(s) | 249, 815, 1307, 2239, 2715, 2716, 2908 |
| BseGI | GGATG | 5 cut(s) | 981, 1806, 2710, 2858, 3019 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 253, 355, 491, 1250, 2129, 2240, 2695, 3231 |
| BseMI | GCAATG | 3 cut(s) | 1137, 1633, 2355 |
| BseMII | CTCAG | 5 cut(s) | 516, 864, 1485, 1677, 2595 |
| BseNI | ACTGG | 4 cut(s) | 168, 401, 695, 1794 |
| BseRI | GAGGAG | 3 cut(s) | 458, 1082, 2771 |
| BseSI | GKGCMC | 2 cut(s) | 230, 734 |
| BseX3I | CGGCCG | 1 cut(s) | 320 |
| BseXI | GCAGC | 6 cut(s) | 917, 1022, 1241, 1587, 1791, 2605 |
| Bsh1236I | CGCG | 1 cut(s) | 319 |
| Bsh1285I | CGRYCG | 1 cut(s) | 323 |
| BshFI | GGCC | 8 cut(s) | 167, 200, 322, 348, 838, 1861, 2237, 2533 |
| BshNI | GGYRCC | 1 cut(s) | 2625 |
| BsiEI | CGRYCG | 1 cut(s) | 323 |
| BsiHKAI | GWGCWC | 4 cut(s) | 230, 245, 641, 2725 |
| BsiHKCI | CYCGRG | 2 cut(s) | 88, 248 |
| BsiSI | CCGG | 4 cut(s) | 164, 2234, 3109, 3144 |
| BsiWI | CGTACG | 1 cut(s) | 3159 |
| BslFI | GGGAC | 3 cut(s) | 1991, 2712, 3188 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 253, 355, 491, 1250, 2129, 2240, 2695, 3231 |
| BsmAI | GTCTC | 6 cut(s) | 241, 1227, 2153, 2209, 2864, 2868 |
| BsmFI | GGGAC | 3 cut(s) | 1991, 2712, 3188 |
| BsmI | GAATGC | 1 cut(s) | 2036 |
| BsnI | GGCC | 8 cut(s) | 167, 200, 322, 348, 838, 1861, 2237, 2533 |
| Bso31I | GGTCTC | 1 cut(s) | 2864 |
| BsoBI | CYCGRG | 2 cut(s) | 88, 248 |
| Bsp119I | TTCGAA | 1 cut(s) | 2728 |
| Bsp1286I | GDGCHC | 8 cut(s) | 230, 245, 641, 734, 745, 1044, 2452, 2725 |
| BspACI | CCGC | 7 cut(s) | 68, 150, 319, 323, 604, 1127, 1257 |
| BspANI | GGCC | 8 cut(s) | 167, 200, 322, 348, 838, 1861, 2237, 2533 |
| BspCNI | CTCAG | 5 cut(s) | 517, 865, 1486, 1676, 2596 |
| BspFNI | CGCG | 1 cut(s) | 319 |
| BspHI | TCATGA | 4 cut(s) | 1183, 1822, 3084, 3240 |
| BspMAI | CTGCAG | 2 cut(s) | 1809, 2098 |
| BspMI | ACCTGC | 2 cut(s) | 2101, 2357 |
| BspOI | GCTAGC | 1 cut(s) | 474 |
| BspPI | GGATC | 5 cut(s) | 848, 1320, 2252, 3089, 3170 |
| BspT104I | TTCGAA | 1 cut(s) | 2728 |
| BspT107I | GGYRCC | 1 cut(s) | 2625 |
| BspTNI | GGTCTC | 1 cut(s) | 2864 |
| BsrDI | GCAATG | 3 cut(s) | 1137, 1633, 2355 |
| BsrFI | RCCGGY | 2 cut(s) | 163, 2233 |
| BsrI | ACTGG | 4 cut(s) | 168, 401, 695, 1794 |
| BssAI | RCCGGY | 2 cut(s) | 163, 2233 |
| BssECI | CCNNGG | 7 cut(s) | 249, 815, 1307, 2239, 2715, 2716, 2908 |
| BssSI | CACGAG | 1 cut(s) | 238 |
| BssT1I | CCWWGG | 1 cut(s) | 2239 |
| Bst2BI | CACGAG | 1 cut(s) | 238 |
| Bst2UI | CCWGG | 6 cut(s) | 816, 1013, 1211, 1308, 2535, 2717 |
| Bst6I | CTCTTC | 6 cut(s) | 95, 585, 1223, 2522, 2568, 2654 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1888, 2354, 2976 |
| BstBAI | YACGTR | 1 cut(s) | 644 |
| BstBI | TTCGAA | 1 cut(s) | 2728 |
| BstDEI | CTNAG | 8 cut(s) | 525, 873, 1338, 1494, 1663, 1709, 2604, 2942 |
| BstDSI | CCRYGG | 1 cut(s) | 2908 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2127 |
| BstF5I | GGATG | 5 cut(s) | 981, 1806, 2710, 2858, 3019 |
| BstFNI | CGCG | 1 cut(s) | 319 |
| BstH2I | RGCGCY | 1 cut(s) | 872 |
| BstHHI | GCGC | 5 cut(s) | 871, 1018, 1952, 2686, 2928 |
| BstMAI | GTCTC | 6 cut(s) | 241, 1227, 2153, 2209, 2864, 2868 |
| BstMCI | CGRYCG | 1 cut(s) | 323 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 57, 835, 1512, 1638, 1888, 2354, 2363, 2976 |
| BstNI | CCWGG | 6 cut(s) | 816, 1013, 1211, 1308, 2535, 2717 |
| BstNSI | RCATGY | 5 cut(s) | 912, 1445, 2085, 2184, 3064 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 690, 1760 |
| BstSCI | CCNGG | 6 cut(s) | 814, 1011, 1209, 1306, 2533, 2715 |
| BstSFI | CTRYAG | 3 cut(s) | 1170, 1805, 2094 |
| BstSLI | GKGCMC | 2 cut(s) | 230, 734 |
| BstUI | CGCG | 1 cut(s) | 319 |
| BstV1I | GCAGC | 6 cut(s) | 917, 1022, 1241, 1587, 1791, 2605 |
| BstV2I | GAAGAC | 6 cut(s) | 113, 164, 299, 786, 1649, 1833 |
| BstX2I | RGATCY | 3 cut(s) | 2244, 2837, 2938 |
| BstYI | RGATCY | 3 cut(s) | 2244, 2837, 2938 |
| BstZI | CGGCCG | 1 cut(s) | 320 |
| BsuI | GTATCC | 2 cut(s) | 920, 2838 |
| BsuRI | GGCC | 8 cut(s) | 167, 200, 322, 348, 838, 1861, 2237, 2533 |
| BtgI | CCRYGG | 1 cut(s) | 2908 |
| BtgZI | GCGATG | 1 cut(s) | 3111 |
| BtrI | CACGTC | 1 cut(s) | 657 |
| BtsCI | GGATG | 5 cut(s) | 981, 1806, 2710, 2858, 3019 |
| BtsI | GCAGTG | 1 cut(s) | 2935 |
| BveI | ACCTGC | 2 cut(s) | 2101, 2357 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1547, 2465 |
| CciI | TCATGA | 4 cut(s) | 1183, 1822, 3084, 3240 |
| CciNI | GCGGCCGC | 1 cut(s) | 320 |
| CfoI | GCGC | 5 cut(s) | 871, 1018, 1952, 2686, 2928 |
| Cfr10I | RCCGGY | 2 cut(s) | 163, 2233 |
| Cfr13I | GGNCC | 4 cut(s) | 198, 346, 773, 2236 |
| Csp6I | GTAC | 6 cut(s) | 359, 648, 1498, 2794, 3116, 3160 |
| CviQI | GTAC | 6 cut(s) | 359, 648, 1498, 2794, 3116, 3160 |
| DdeI | CTNAG | 8 cut(s) | 525, 873, 1338, 1494, 1663, 1709, 2604, 2942 |
| DraI | TTTAAA | 3 cut(s) | 478, 1276, 2142 |
| DraIII | CACNNNGTG | 4 cut(s) | 1712, 2067, 2319, 2692 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2201 |
| EaeI | YGGCCR | 2 cut(s) | 165, 320 |
| EagI | CGGCCG | 1 cut(s) | 320 |
| Eam1104I | CTCTTC | 6 cut(s) | 95, 585, 1223, 2522, 2568, 2654 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2201 |
| EarI | CTCTTC | 6 cut(s) | 95, 585, 1223, 2522, 2568, 2654 |
| Ecl136II | GAGCTC | 1 cut(s) | 639 |
| EclXI | CGGCCG | 1 cut(s) | 320 |
| Eco130I | CCWWGG | 1 cut(s) | 2239 |
| Eco147I | AGGCCT | 1 cut(s) | 2533 |
| Eco24I | GRGCYC | 4 cut(s) | 641, 745, 1044, 2452 |
| Eco31I | GGTCTC | 1 cut(s) | 2864 |
| Eco47I | GGWCC | 1 cut(s) | 773 |
| Eco52I | CGGCCG | 1 cut(s) | 320 |
| Eco53kI | GAGCTC | 1 cut(s) | 639 |
| Eco88I | CYCGRG | 2 cut(s) | 88, 248 |
| EcoICRI | GAGCTC | 1 cut(s) | 639 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2127 |
| EcoRI | GAATTC | 2 cut(s) | 1049, 3194 |
| EcoRII | CCWGG | 6 cut(s) | 814, 1011, 1209, 1306, 2533, 2715 |
| EcoT14I | CCWWGG | 1 cut(s) | 2239 |
| EcoT22I | ATGCAT | 1 cut(s) | 3062 |
| EcoT38I | GRGCYC | 4 cut(s) | 641, 745, 1044, 2452 |
| ErhI | CCWWGG | 1 cut(s) | 2239 |
| FaqI | GGGAC | 3 cut(s) | 1991, 2712, 3188 |
| FauI | CCCGC | 1 cut(s) | 61 |
| FauNDI | CATATG | 1 cut(s) | 1370 |
| FbaI | TGATCA | 1 cut(s) | 3045 |
| FokI | GGATG | 5 cut(s) | 988, 1813, 2697, 2865, 3026 |
| FriOI | GRGCYC | 4 cut(s) | 641, 745, 1044, 2452 |
| FspBI | CTAG | 5 cut(s) | 417, 471, 878, 1758, 2214 |
| FspI | TGCGCA | 1 cut(s) | 2685 |
| GlaI | GCGC | 5 cut(s) | 870, 1017, 1951, 2685, 2927 |
| HaeII | RGCGCY | 1 cut(s) | 872 |
| HaeIII | GGCC | 8 cut(s) | 167, 200, 322, 348, 838, 1861, 2237, 2533 |
| HapII | CCGG | 4 cut(s) | 164, 2234, 3109, 3144 |
| HhaI | GCGC | 5 cut(s) | 871, 1018, 1952, 2686, 2928 |
| Hin6I | GCGC | 5 cut(s) | 869, 1016, 1950, 2684, 2926 |
| HinP1I | GCGC | 5 cut(s) | 869, 1016, 1950, 2684, 2926 |
| HincII | GTYRAC | 1 cut(s) | 1344 |
| HindII | GTYRAC | 1 cut(s) | 1344 |
| HindIII | AAGCTT | 1 cut(s) | 2567 |
| HinfI | GANTC | 9 cut(s) | 37, 62, 278, 380, 943, 1142, 1387, 1544, 2482 |
| HpaI | GTTAAC | 1 cut(s) | 1344 |
| HpaII | CCGG | 4 cut(s) | 164, 2234, 3109, 3144 |
| HphI | GGTGA | 6 cut(s) | 83, 343, 806, 2924, 2932, 3158 |
| Hpy166II | GTNNAC | 8 cut(s) | 228, 650, 1003, 1095, 1264, 1344, 1935, 2915 |
| Hpy8I | GTNNAC | 8 cut(s) | 228, 650, 1003, 1095, 1264, 1344, 1935, 2915 |
| HpyCH4IV | ACGT | 7 cut(s) | 643, 656, 1215, 1331, 2953, 3135, 3158 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 57, 835, 1512, 1638, 1888, 2354, 2363, 2976 |
| HpyF3I | CTNAG | 8 cut(s) | 525, 873, 1338, 1494, 1663, 1709, 2604, 2942 |
| HpySE526I | ACGT | 7 cut(s) | 643, 656, 1215, 1331, 2953, 3135, 3158 |
| HspAI | GCGC | 5 cut(s) | 869, 1016, 1950, 2684, 2926 |
| KroI | GCCGGC | 1 cut(s) | 2233 |
| KroNI | GCCGGC | 1 cut(s) | 2235 |
| Ksp22I | TGATCA | 1 cut(s) | 3045 |
| KspAI | GTTAAC | 1 cut(s) | 1344 |
| Lsp1109I | GCAGC | 6 cut(s) | 917, 1022, 1241, 1587, 1791, 2605 |
| LweI | GCATC | 6 cut(s) | 892, 1791, 1937, 2366, 2665, 3004 |
| MaeI | CTAG | 5 cut(s) | 417, 471, 878, 1758, 2214 |
| MaeII | ACGT | 7 cut(s) | 643, 656, 1215, 1331, 2953, 3135, 3158 |
| MaeIII | GTNAC | 5 cut(s) | 1451, 1612, 2176, 3136, 3146 |
| MfeI | CAATTG | 4 cut(s) | 671, 1062, 1592, 3067 |
| MflI | RGATCY | 3 cut(s) | 2244, 2837, 2938 |
| MhlI | GDGCHC | 8 cut(s) | 230, 245, 641, 734, 745, 1044, 2452, 2725 |
| MlyI | GAGTC | 6 cut(s) | 46, 71, 287, 374, 1136, 2476 |
| MmeI | TCCRAC | 3 cut(s) | 946, 2789, 3212 |
| Mph1103I | ATGCAT | 1 cut(s) | 3062 |
| MroNI | GCCGGC | 1 cut(s) | 2233 |
| MroXI | GAANNNNTTC | 4 cut(s) | 209, 1920, 2741, 2895 |
| MslI | CAYNNNNRTG | 6 cut(s) | 659, 1362, 1827, 2420, 2820, 3089 |
| MspA1I | CMGCKG | 3 cut(s) | 68, 152, 1035 |
| MspI | CCGG | 4 cut(s) | 164, 2234, 3109, 3144 |
| MspR9I | CCNGG | 6 cut(s) | 816, 1013, 1211, 1308, 2535, 2717 |
| MunI | CAATTG | 4 cut(s) | 671, 1062, 1592, 3067 |
| Mva1269I | GAATGC | 1 cut(s) | 2036 |
| MvaI | CCWGG | 6 cut(s) | 816, 1013, 1211, 1308, 2535, 2717 |
| MvnI | CGCG | 1 cut(s) | 319 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 57, 835, 1512, 1638, 1888, 2354, 2363, 2976 |
| NaeI | GCCGGC | 1 cut(s) | 2235 |
| NdeI | CATATG | 1 cut(s) | 1370 |
| NgoMIV | GCCGGC | 1 cut(s) | 2233 |
| NheI | GCTAGC | 1 cut(s) | 470 |
| NmeAIII | GCCGAG | 6 cut(s) | 36, 60, 117, 226, 374, 2654 |
| NmuCI | GTSAC | 2 cut(s) | 1451, 3146 |
| NotI | GCGGCCGC | 1 cut(s) | 320 |
| NsbI | TGCGCA | 1 cut(s) | 2685 |
| NsiI | ATGCAT | 1 cut(s) | 3062 |
| NspI | RCATGY | 5 cut(s) | 912, 1445, 2085, 2184, 3064 |
| NspV | TTCGAA | 1 cut(s) | 2728 |
| OliI | CACNNNNGTG | 1 cut(s) | 659 |
| PaeI | GCATGC | 2 cut(s) | 1445, 3064 |
| PagI | TCATGA | 4 cut(s) | 1183, 1822, 3084, 3240 |
| PaqCI | CACCTGC | 1 cut(s) | 2101 |
| PasI | CCCWGGG | 1 cut(s) | 2716 |
| PceI | AGGCCT | 1 cut(s) | 2533 |
| PciI | ACATGT | 1 cut(s) | 2180 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3180 |
| PctI | GAATGC | 1 cut(s) | 2036 |
| PdiI | GCCGGC | 1 cut(s) | 2235 |
| PdmI | GAANNNNTTC | 4 cut(s) | 209, 1920, 2741, 2895 |
| PfeI | GAWTC | 3 cut(s) | 943, 1387, 1544 |
| Pfl23II | CGTACG | 1 cut(s) | 3159 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2695 |
| PleI | GAGTC | 6 cut(s) | 45, 70, 286, 374, 1136, 2476 |
| PpsI | GAGTC | 6 cut(s) | 45, 70, 286, 374, 1136, 2476 |
| Ppu21I | YACGTR | 1 cut(s) | 644 |
| PscI | ACATGT | 1 cut(s) | 2180 |
| PshAI | GACNNNNGTC | 2 cut(s) | 690, 1760 |
| Psp124BI | GAGCTC | 1 cut(s) | 641 |
| Psp6I | CCWGG | 6 cut(s) | 814, 1011, 1209, 1306, 2533, 2715 |
| PspGI | CCWGG | 6 cut(s) | 814, 1011, 1209, 1306, 2533, 2715 |
| PspLI | CGTACG | 1 cut(s) | 3159 |
| PspPI | GGNCC | 4 cut(s) | 198, 346, 773, 2236 |
| PstI | CTGCAG | 2 cut(s) | 1809, 2098 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1547, 2465 |
| PsuI | RGATCY | 3 cut(s) | 2244, 2837, 2938 |
| PvuII | CAGCTG | 1 cut(s) | 1035 |
| RsaI | GTAC | 6 cut(s) | 360, 649, 1499, 2795, 3117, 3161 |
| RsaNI | GTAC | 6 cut(s) | 359, 648, 1498, 2794, 3116, 3160 |
| RseI | CAYNNNNRTG | 6 cut(s) | 659, 1362, 1827, 2420, 2820, 3089 |
| SacI | GAGCTC | 1 cut(s) | 641 |
| Sau96I | GGNCC | 4 cut(s) | 198, 346, 773, 2236 |
| ScaI | AGTACT | 1 cut(s) | 1499 |
| SchI | GAGTC | 6 cut(s) | 46, 71, 287, 374, 1136, 2476 |
| ScrFI | CCNGG | 6 cut(s) | 816, 1013, 1211, 1308, 2535, 2717 |
| SduI | GDGCHC | 8 cut(s) | 230, 245, 641, 734, 745, 1044, 2452, 2725 |
| SfaNI | GCATC | 6 cut(s) | 892, 1791, 1937, 2366, 2665, 3004 |
| SfcI | CTRYAG | 3 cut(s) | 1170, 1805, 2094 |
| SfuI | TTCGAA | 1 cut(s) | 2728 |
| SinI | GGWCC | 1 cut(s) | 773 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 659, 1362, 1827, 2420, 2820, 3089 |
| SmlI | CTYRAG | 1 cut(s) | 2248 |
| SmoI | CTYRAG | 1 cut(s) | 2248 |
| SpeI | ACTAGT | 2 cut(s) | 416, 1757 |
| SphI | GCATGC | 2 cut(s) | 1445, 3064 |
| SseBI | AGGCCT | 1 cut(s) | 2533 |
| SsiI | CCGC | 7 cut(s) | 68, 150, 319, 323, 604, 1127, 1257 |
| SspMI | CTAG | 5 cut(s) | 417, 471, 878, 1758, 2214 |
| SstI | GAGCTC | 1 cut(s) | 641 |
| StuI | AGGCCT | 1 cut(s) | 2533 |
| StyD4I | CCNGG | 6 cut(s) | 814, 1011, 1209, 1306, 2533, 2715 |
| StyI | CCWWGG | 1 cut(s) | 2239 |
| TaiI | ACGT | 7 cut(s) | 646, 659, 1218, 1334, 2956, 3138, 3161 |
| TaqI | TCGA | 6 cut(s) | 266, 341, 635, 2582, 2728, 3174 |
| TatI | WGTACW | 3 cut(s) | 647, 1497, 3115 |
| TauI | GCSGC | 4 cut(s) | 152, 322, 325, 1130 |
| TfiI | GAWTC | 3 cut(s) | 943, 1387, 1544 |
| TseFI | GTSAC | 2 cut(s) | 1451, 3146 |
| TseI | GCWGC | 6 cut(s) | 905, 1035, 1254, 1600, 1804, 2618 |
| Tsp45I | GTSAC | 2 cut(s) | 1451, 3146 |
| TspGWI | ACGGA | 3 cut(s) | 373, 1112, 2247 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2695 |
| VneI | GTGCAC | 1 cut(s) | 226 |
| VpaK11BI | GGWCC | 1 cut(s) | 773 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2127 |
| XapI | RAATTY | 8 cut(s) | 1049, 1458, 1480, 1523, 2263, 2298, 3194, 3236 |
| XceI | RCATGY | 5 cut(s) | 912, 1445, 2085, 2184, 3064 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1217, 1794 |
| XmnI | GAANNNNTTC | 4 cut(s) | 209, 1920, 2741, 2895 |
| XspI | CTAG | 5 cut(s) | 417, 471, 878, 1758, 2214 |
| ZrmI | AGTACT | 1 cut(s) | 1499 |
| Zsp2I | ATGCAT | 1 cut(s) | 3062 |