Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011056

Physical Location & Seq

Genomic Coordinates Forward (+)

21677146 .. 21684122

Gene Structure 6977 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G53430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3132 bp

ATGATAATCAAACGAAAGTTGAAAACTTTGAAACGATGTAATTCGACTAATGAAGAAGATGATATAGTTCGGAAGAAGAGAAAGGTCAACCTCAATGGTGGTGGTAGTGGTGGTGATTACTATTACCCTCTTAATCTTCTTGGAGAGATTGGTGCTGGGATTGTTCCTGGTAAGAATGGATTCTCTGTTTCTTTGTGTAAGCAAGTTTCGTGTTCTCCTAAAGTTGAGGTGGTGGAGGAAGAAGAGGAGGAGGAGGAGATAAAGTCAACGAGATTAGTTTCACGGCCACCGCTTGTGAAGACATCTAGAGGAAGAGTTCAGGTGCTTCCTTCACGGTTTAATGACTCGGTTATCGAGAATTGGAGGAAAGATAATAAAAGTAGTGGCGAAGAACGCGAGGAAGAGATTGAAGAAGAAGCATGCAGGAAGGAGAAAGTCAAAGTTAGTAGTAATCATAGTTTGAAGATTAAGCAACAGGAAACTAAATTTACTCCTAGGAACTATAAGTATAGTAGTAGTAGTGCATTGTGTGGAGAGATAGATGATGAGGATAAATGTGAAGAGATTGTTAGATATGGTAATAGCTTTGAGATGAAGAAGCAGCGTTATGTAGATGATGAGCCTCGTCCTAAGAAAGAAGGTGTTTATGGGCCAGAGGATTTTTATTCTGGTGATTTGGTTTGGGGTAAATCCGGGAGGAATGAGCCGTTTTGGCCGGCTATTGTTATTGATCCAATGACGCAAGCGCCTGAGCTTGTTTTGCGTTCTTGTATACCTGATGCAGCTTGTGTTATGTTCTTTGGTCACTCTGGGACAGAGAATGAAAGGGATTATGCATGGGTTAGGAGAGGGATGATTTTCCCATTTGTGGATTATGTAGAGAGGTTACAAGAACAGTCTGAACTGCGTGGATGCAACCCTAGGGATTTTCAGATGGCACTTGAAGAAGCTCTTTTGGCAGACCAAGGGTTTACAGAAAAGCTGATGCAGGATATTCACATGGCCGCTGGTAACCAGACTTTTGATGATTCTGTCTACAGATGGGTTGAAGAAGCTGCAGGCTCGAGCCAATATCTTGATCACGTTGCTCCAAGCCAGGACATGAAGAAATACAGAAATCCAAGAGCCTGTGTAGGATGTGGAATGGTCCTTTCTTTTAAGATGGCACAGAAAATGAAAGCTCTGATTCCCGGAGATCAATTATTGTGTCAACCTTGTTCAAAGCTGACAAAACCGAAACACGTTTGTGGGATATGCAAGAGGATATGGAATCATTTGGATAGTCAGAGCTGGGTGCGTTGTGATGGGTGTAAAGTCTGGATTCACTCAGCGTGTGATCAAATATCACATAAGCATTTTAAGGATTTGGGGGAAACAGATTACTATTGTCCCACATGCAGAACAAAATTTGATTTTGAGCTATCAGATTCAGAAAAACCAGACTCAAAATCCAAACTTGGCAAAAACAATGCCCCGATGGTGCTTCCTGATAAAGTTATTGTTGTATGCTCTGGAGTTGAAGGCATATATTTTCCAAGCCTTCATTTAGTCGTATGTAAGTGTGGATCTTGTGGACCTGAAAGGAAAGCACTTAGTGAATGGGAGAGGCATACTGGTTCAAAAGCAAAAAATTGGAGAACTAGTGTTAAAGTTAAAAGCTCCAAGCTGCCTCTAGAAGAATGGATGATGAAATTAGCAGAGTTCCACGCAAATGCTACTGCAGCAAAACCTCCTAAACGACCTTCTATAAAGCAGAGAAAGCAAAGGTTACTTTCCTTTCTTAGAGAAAAGTATGAGCCGGTCAACGTGAAATGGACAACCGAGCGATGTGCAGTTTGCAGATGGGTGGAAGATTGGGACTACAACAAGATCATTATCTGCAACAGATGTCAAATAGCAGTTCATCAGGAATGCTATGGGACGAGAAACGTTCGTGACTTCACATCATGGGTCTGCAAAGCCTGCGAGACACCTGAGATCAAACGAGAGTGTTGCCTCTGTCCTGTAAAAGGAGGTGCATTAAAGCCAACTGATGTGGAGACACTGTGGGTTCACGTGACATGTGCTTGGTTTCAGCCTGAAGTATGTTTTGCAAGTGAAGAAAAAATGGAACCAGCTTTGGGGATTTTGAGTATTCCATCAAGTAATTTTGTGAAGATTTGTGTAATATGCAAGCAAATACATGGCTCATGCACTCAGTGTTGCAAGTGCTCTACGTATTATCATGCCATGTGTGCTTCCCGAGCTGGGTATAGAATGGAGTTGCACTGCTTGGAGAAAAATGGTCGACAGATAACAAAGATGGTGTCGTATTGTTCTTATCACAGGGCTCCGAATCCAGATACTGTGTTAATTATACAGACGCCTTCAGGGGTCTTTTCTGCGAAAAGTCTTGTTCAAAATAAAAAGAAATCTGGTACGAGGCTTATTTTAGCAAACAGAGAAGAAATTGAAGAGTCTGCCGCAGAGGATACCATACCAATTGATCCATTTTCTTCTGCTCGTTGTCGACTATATAAAAGAACGGTTAATAGCAAGAAGAGGACGAAAGAAGAAGGTATTCCTCACTACACAGGAGGACTACGTCATCATCCATCCGCAGCGATCCAAACTTTGAACGCATTCAGGCATGTGGCAGAAGAACCCAAATCATTTTCCTCGTTCAGGGAACGGCTTCACCACTTGCAGAGGACAGAAATGGAACGGGTCTGCTTTGGTCGATCTGGTATACATGGATGGGGCCTTTTTGCGAGAAGAAATATTCAAGAAGGAGAAATGGTTCTTGAATACCGTGGGGAACAAGTGAGAGGAATCATTGCAGACTTAAGGGAAGCAAGATATCGAAGAGAAGGGAAGGATTGCTACCTGTTTAAGATCAGTGAGGAAGTAGTGGTGGATGCGACAGAGAAAGGGAATATTGCTCGACTAATAAACCATTCGTGTATGCCAAATTGCTATGCAAGGATTATGAGTGTAGGAGATGACGAAAGTCGGATTGTTCTGATTGCCAAGACCACTGTAGCTTCCTGCGAGGAGTTAACATACGATTACTTGTTTGATCCAGATGAACCTGATGAATTCAAGGTGCCGTGTCTATGTAAATCCCCCAACTGCAGGAAATTCATGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005911 GO:0008150 GO:0009292 GO:0009294 GO:0009506 GO:0009893 GO:0009987 GO:0010604 GO:0010638 GO:0019222 GO:0030054 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0033043 GO:0033044 GO:0044764 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051569 GO:0051571 GO:0051704 GO:0055044 GO:0060255 GO:0065007 GO:0080090 GO:1902275 GO:1905269 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD PHD_2 PWWP SET zf-HC5HC2H_2

Protein Analysis

1043

Amino Acids

119.12

Weight (kDa)

8.45

Isoelectric Point (pI)

50.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PWWP	PF00855	224 - 318	6.1e-13	PWWP domain
PHD_2	PF13831	622 - 656	6.7e-12	PHD-finger
zf-HC5HC2H_2	PF13832	663 - 775	4.7e-26	PHD-zinc-finger like domain
zf-HC5HC2H	PF13771	685 - 776	7.5e-12	PHD-like zinc-binding domain
SET	PF00856	912 - 1017	5e-23	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011056)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27910 AT5G53430
fragaria_vesca	FvH4_7g31710 FvH4_7g31710
malus_domestica	MD01G1220300.v1.1 MD07G1289800.v1.1
prunus_persica	Prupe.2G311000_v2.0.a1
pyrus_communis	pycom01g22990 pycom07g26250
rosa_chinensis	RchiOBHm_Chr1g0380901
rosa_laevigata	RLG00000026264
rosa_multiflora	Rmu_sc0002962.1_g000020
rosa_roxburghii	Rroxscaffold_4G00278980
rosa_rugosa	Rorug01G0425200 Rorug01G0425300
rosa_samantha	Rh1AG449100 Rh1BG404800 Rh1CG418800 Rh1DG435200
rosa_wichuraiana	Rw1G039150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	3085
AccI	GTMKAC	5 cut(s)	772, 1035, 2287, 2509, 2728
AccII	CGCG	1 cut(s)	396
AciI	CCGC	4 cut(s)	290, 1005, 2463, 2598
AclI	AACGTT	1 cut(s)	1929
AclWI	GGATC	5 cut(s)	725, 1573, 2480, 2599, 3053
AcoI	YGGCCR	3 cut(s)	284, 713, 1002
AcsI	RAATTY	4 cut(s)	485, 1406, 3077, 3119
AcuI	CTGAAG	2 cut(s)	2100, 2352
AcvI	CACGTG	1 cut(s)	2056
AcyI	GRCGYC	1 cut(s)	2363
AdeI	CACNNNGTG	2 cut(s)	1595, 2199
AfaI	GTAC	1 cut(s)	2419
AfiI	CCNNNNNNNGG	6 cut(s)	868, 2009, 2120, 2247, 2664, 3114
AflII	CTTAAG	1 cut(s)	2824
AflIII	ACRYGT	2 cut(s)	1240, 2060
AhlI	ACTAGT	1 cut(s)	1640
AjnI	CCWGG	2 cut(s)	166, 1095
AleI	CACNNNNGTG	1 cut(s)	1245
AloI	GAACNNNNNNTCC	2 cut(s)	2763, 2795
Alw21I	GWGCWC	1 cut(s)	2213
Alw26I	GTCTC	2 cut(s)	1961, 2033
AlwI	GGATC	5 cut(s)	725, 1573, 2480, 2599, 3053
AlwNI	CAGNNNCTG	1 cut(s)	2345
Ama87I	CYCGRG	2 cut(s)	1063, 2241
AoxI	GGCC	5 cut(s)	284, 650, 713, 1002, 2740
ApeKI	GCWGC	6 cut(s)	601, 782, 1055, 1666, 1721, 2600
ApoI	RAATTY	4 cut(s)	485, 1406, 3077, 3119
ArsI	GACNNNNNNTTYG	2 cut(s)	2291, 2323
Asp700I	GAANNNNTTC	5 cut(s)	179, 2559, 2621, 2673, 2778
AspA2I	CCTAGG	2 cut(s)	494, 920
AspLEI	GCGC	1 cut(s)	748
AspS9I	GGNCC	4 cut(s)	650, 1147, 1574, 2740
AsuC2I	CCSGG	2 cut(s)	694, 1191
AsuHPI	GGTGA	3 cut(s)	125, 683, 2669
AvaI	CYCGRG	2 cut(s)	1063, 2241
AvaII	GGWCC	2 cut(s)	1147, 1574
AvrII	CCTAGG	2 cut(s)	494, 920
BanI	GGYRCC	1 cut(s)	3085
BanII	GRGCYC	1 cut(s)	2332
BarI	GAAGNNNNNNTAC	2 cut(s)	2846, 2878
BbrPI	CACGTG	1 cut(s)	2056
BbsI	GAAGAC	1 cut(s)	305
Bbv12I	GWGCWC	1 cut(s)	2213
BbvI	GCAGC	6 cut(s)	613, 794, 1042, 1653, 1733, 2612
BceAI	ACGGC	4 cut(s)	299, 691, 2687, 3073
BcgI	CGANNNNNNTGC	4 cut(s)	1811, 1845, 1974, 2008
BciT130I	CCWGG	2 cut(s)	168, 1097
BciVI	GTATCC	1 cut(s)	2464
BclI	TGATCA	2 cut(s)	1078, 1336
BcnI	CCSGG	2 cut(s)	694, 1191
BcoDI	GTCTC	2 cut(s)	1961, 2033
BcuI	ACTAGT	1 cut(s)	1640
BfaI	CTAG	5 cut(s)	306, 495, 921, 1641, 1673
BfmI	CTRYAG	5 cut(s)	1036, 1056, 1719, 3018, 3112
BfoI	RGCGCY	1 cut(s)	749
BfrI	CTTAAG	1 cut(s)	2824
BfuI	GTATCC	1 cut(s)	2464
BglI	GCCNNNNNGGC	1 cut(s)	712
BisI	GCNGC	8 cut(s)	602, 783, 1005, 1056, 1667, 1722, 2463, 2601
BlnI	CCTAGG	2 cut(s)	494, 920
BlsI	GCNGC	8 cut(s)	603, 784, 1006, 1057, 1668, 1723, 2464, 2602
Bme1390I	CCNGG	4 cut(s)	168, 694, 1097, 1191
Bme18I	GGWCC	2 cut(s)	1147, 1574
BmeT110I	CYCGRG	2 cut(s)	1063, 2241
BmgT120I	GGNCC	4 cut(s)	650, 1147, 1574, 2740
BmiI	GGNNCC	4 cut(s)	2112, 2331, 2741, 3087
BmrFI	CCNGG	4 cut(s)	168, 694, 1097, 1191
BmsI	GCATC	4 cut(s)	769, 902, 975, 2887
BoxI	GACNNNNGTC	1 cut(s)	2988
BpiI	GAAGAC	1 cut(s)	305
BpmI	CTGGAG	1 cut(s)	1533
Bpu10I	CCTNAGC	1 cut(s)	750
BpuMI	CCSGG	2 cut(s)	694, 1191
BsaAI	YACGTR	2 cut(s)	2056, 2217
BsaBI	GATNNNNATC	1 cut(s)	1874
BsaHI	GRCGYC	1 cut(s)	2363
BsaJI	CCNNGG	4 cut(s)	494, 920, 964, 2791
BsaXI	ACNNNNNCTCC	8 cut(s)	248, 278, 1627, 1657, 2030, 2060, 2763, 2793
Bsc4I	CCNNNNNNNGG	6 cut(s)	868, 2009, 2120, 2247, 2664, 3114
Bse118I	RCCGGY	2 cut(s)	715, 1798
Bse1I	ACTGG	1 cut(s)	1618
Bse3DI	GCAATG	1 cut(s)	2814
Bse8I	GATNNNNATC	1 cut(s)	1874
BseBI	CCWGG	2 cut(s)	168, 1097
BseDI	CCNNGG	4 cut(s)	494, 920, 964, 2791
BseGI	GGATG	8 cut(s)	858, 917, 1142, 1689, 2590, 2594, 2741, 2902
BseJI	GATNNNNATC	1 cut(s)	1874
BseLI	CCNNNNNNNGG	6 cut(s)	868, 2009, 2120, 2247, 2664, 3114
BseMI	GCAATG	1 cut(s)	2814
BseMII	CTCAG	4 cut(s)	741, 1341, 1965, 2210
BseNI	ACTGG	1 cut(s)	1618
BseRI	GAGGAG	5 cut(s)	260, 263, 266, 269, 3047
BseXI	GCAGC	6 cut(s)	613, 794, 1042, 1653, 1733, 2612
BseYI	CCCAGC	3 cut(s)	155, 1290, 2246
BsgI	GTGCAG	1 cut(s)	1851
Bsh1236I	CGCG	1 cut(s)	396
BshFI	GGCC	5 cut(s)	286, 652, 715, 1004, 2742
BshNI	GGYRCC	1 cut(s)	3085
BsiHKAI	GWGCWC	1 cut(s)	2213
BsiHKCI	CYCGRG	2 cut(s)	1063, 2241
BsiSI	CCGG	4 cut(s)	693, 716, 1191, 1799
BslFI	GGGAC	4 cut(s)	826, 1374, 1871, 1933
BslI	CCNNNNNNNGG	6 cut(s)	868, 2009, 2120, 2247, 2664, 3114
BsmAI	GTCTC	2 cut(s)	1961, 2033
BsmFI	GGGAC	4 cut(s)	826, 1374, 1871, 1933
BsmI	GAATGC	2 cut(s)	1916, 2621
BsnI	GGCC	5 cut(s)	286, 652, 715, 1004, 2742
BsoBI	CYCGRG	2 cut(s)	1063, 2241
Bsp1286I	GDGCHC	2 cut(s)	2213, 2332
BspACI	CCGC	4 cut(s)	290, 1005, 2463, 2598
BspANI	GGCC	5 cut(s)	286, 652, 715, 1004, 2742
BspCNI	CTCAG	4 cut(s)	742, 1340, 1966, 2209
BspFNI	CGCG	1 cut(s)	396
BspHI	TCATGA	1 cut(s)	3123
BspLI	GGNNCC	4 cut(s)	2112, 2331, 2741, 3087
BspMAI	CTGCAG	3 cut(s)	1060, 1723, 3116
BspPI	GGATC	5 cut(s)	725, 1573, 2480, 2599, 3053
BspT107I	GGYRCC	1 cut(s)	3085
BspTI	CTTAAG	1 cut(s)	2824
BsrDI	GCAATG	1 cut(s)	2814
BsrFI	RCCGGY	2 cut(s)	715, 1798
BsrI	ACTGG	1 cut(s)	1618
BssAI	RCCGGY	2 cut(s)	715, 1798
BssECI	CCNNGG	4 cut(s)	494, 920, 964, 2791
BssNAI	GTATAC	2 cut(s)	773, 2729
BssNI	GRCGYC	1 cut(s)	2363
BssT1I	CCWWGG	3 cut(s)	494, 920, 964
Bst1107I	GTATAC	2 cut(s)	773, 2729
Bst2UI	CCWGG	2 cut(s)	168, 1097
Bst4CI	ACNGT	7 cut(s)	336, 897, 2046, 2347, 2527, 2792, 3019
Bst6I	CTCTTC	8 cut(s)	71, 237, 307, 396, 555, 2448, 2534, 2839
BstACI	GRCGYC	1 cut(s)	2363
BstAFI	CTTAAG	1 cut(s)	2824
BstAPI	GCANNNNNTGC	1 cut(s)	1962
BstBAI	YACGTR	2 cut(s)	2056, 2217
BstC8I	GCNNGC	6 cut(s)	421, 717, 744, 1060, 1963, 2174
BstDEI	CTNAG	7 cut(s)	630, 750, 1327, 1592, 1781, 1974, 2196
BstDSI	CCRYGG	1 cut(s)	2791
BstEII	GGTNACC	1 cut(s)	1010
BstENI	CCTNNNNNAGG	2 cut(s)	2007, 2662
BstF5I	GGATG	8 cut(s)	858, 917, 1142, 1689, 2590, 2594, 2741, 2902
BstFNI	CGCG	1 cut(s)	396
BstH2I	RGCGCY	1 cut(s)	749
BstHHI	GCGC	1 cut(s)	748
BstMAI	GTCTC	2 cut(s)	1961, 2033
BstMWI	GCNNNNNNNGC	9 cut(s)	393, 712, 760, 956, 1721, 1759, 1962, 2234, 2243
BstNI	CCWGG	2 cut(s)	168, 1097
BstNSI	RCATGY	4 cut(s)	423, 1398, 2064, 2633
BstPAI	GACNNNNGTC	1 cut(s)	2988
BstPI	GGTNACC	1 cut(s)	1010
BstSCI	CCNGG	4 cut(s)	166, 692, 1095, 1189
BstSFI	CTRYAG	5 cut(s)	1036, 1056, 1719, 3018, 3112
BstSNI	TACGTA	1 cut(s)	2217
BstUI	CGCG	1 cut(s)	396
BstV1I	GCAGC	6 cut(s)	613, 794, 1042, 1653, 1733, 2612
BstV2I	GAAGAC	1 cut(s)	305
BstX2I	RGATCY	1 cut(s)	1565
BstYI	RGATCY	1 cut(s)	1565
BstZ17I	GTATAC	2 cut(s)	773, 2729
BsuI	GTATCC	1 cut(s)	2464
BsuRI	GGCC	5 cut(s)	286, 652, 715, 1004, 2742
BtgI	CCRYGG	1 cut(s)	2791
BtgZI	GCGATG	1 cut(s)	1840
BtsCI	GGATG	8 cut(s)	858, 917, 1142, 1689, 2590, 2594, 2741, 2902
BtsI	GCAGTG	1 cut(s)	2266
BtsIMutI	CAGTG	5 cut(s)	2042, 2204, 2266, 2884, 3015
Cac8I	GCNNGC	6 cut(s)	421, 717, 744, 1060, 1963, 2174
CaiI	CAGNNNCTG	1 cut(s)	2345
CciI	TCATGA	1 cut(s)	3123
CfoI	GCGC	1 cut(s)	748
Cfr10I	RCCGGY	2 cut(s)	715, 1798
Cfr13I	GGNCC	4 cut(s)	650, 1147, 1574, 2740
CseI	GACGC	2 cut(s)	748, 2371
Csp6I	GTAC	1 cut(s)	2418
CspCI	CAANNNNNGTGG	4 cut(s)	82, 117, 2016, 2051
CviQI	GTAC	1 cut(s)	2418
DdeI	CTNAG	7 cut(s)	630, 750, 1327, 1592, 1781, 1974, 2196
DraIII	CACNNNGTG	2 cut(s)	1595, 2199
EaeI	YGGCCR	3 cut(s)	284, 713, 1002
Eam1104I	CTCTTC	8 cut(s)	71, 237, 307, 396, 555, 2448, 2534, 2839
EarI	CTCTTC	8 cut(s)	71, 237, 307, 396, 555, 2448, 2534, 2839
Eco105I	TACGTA	1 cut(s)	2217
Eco130I	CCWWGG	3 cut(s)	494, 920, 964
Eco24I	GRGCYC	1 cut(s)	2332
Eco32I	GATATC	1 cut(s)	2840
Eco47I	GGWCC	2 cut(s)	1147, 1574
Eco57I	CTGAAG	2 cut(s)	2100, 2352
Eco72I	CACGTG	1 cut(s)	2056
Eco88I	CYCGRG	2 cut(s)	1063, 2241
Eco91I	GGTNACC	1 cut(s)	1010
EcoNI	CCTNNNNNAGG	2 cut(s)	2007, 2662
EcoO109I	RGGNCCY	1 cut(s)	2740
EcoO65I	GGTNACC	1 cut(s)	1010
EcoRI	GAATTC	1 cut(s)	3077
EcoRII	CCWGG	2 cut(s)	166, 1095
EcoRV	GATATC	1 cut(s)	2840
EcoT14I	CCWWGG	3 cut(s)	494, 920, 964
EcoT22I	ATGCAT	1 cut(s)	838
EcoT38I	GRGCYC	1 cut(s)	2332
ErhI	CCWWGG	3 cut(s)	494, 920, 964
FalI	AAGNNNNNCTT	2 cut(s)	936, 968
FaqI	GGGAC	4 cut(s)	826, 1374, 1871, 1933
FbaI	TGATCA	2 cut(s)	1078, 1336
FblI	GTMKAC	5 cut(s)	772, 1035, 2287, 2509, 2728
Fnu4HI	GCNGC	8 cut(s)	602, 783, 1005, 1056, 1667, 1722, 2463, 2601
FokI	GGATG	8 cut(s)	865, 924, 1149, 1696, 2577, 2581, 2748, 2909
FriOI	GRGCYC	1 cut(s)	2332
Fsp4HI	GCNGC	8 cut(s)	602, 783, 1005, 1056, 1667, 1722, 2463, 2601
FspBI	CTAG	5 cut(s)	306, 495, 921, 1641, 1673
GlaI	GCGC	1 cut(s)	747
GluI	GCNGC	8 cut(s)	602, 783, 1005, 1056, 1667, 1722, 2463, 2601
GsaI	CCCAGC	3 cut(s)	159, 1294, 2250
GsuI	CTGGAG	1 cut(s)	1533
HaeII	RGCGCY	1 cut(s)	749
HaeIII	GGCC	5 cut(s)	286, 652, 715, 1004, 2742
HapII	CCGG	4 cut(s)	693, 716, 1191, 1799
HgaI	GACGC	2 cut(s)	748, 2371
HhaI	GCGC	1 cut(s)	748
Hin1I	GRCGYC	1 cut(s)	2363
Hin6I	GCGC	1 cut(s)	746
HinP1I	GCGC	1 cut(s)	746
HincII	GTYRAC	7 cut(s)	88, 267, 1211, 1804, 2288, 2510, 3039
HindII	GTYRAC	7 cut(s)	88, 267, 1211, 1804, 2288, 2510, 3039
HpaI	GTTAAC	1 cut(s)	3039
HpaII	CCGG	4 cut(s)	693, 716, 1191, 1799
HphI	GGTGA	3 cut(s)	125, 683, 2669
HpyCH4III	ACNGT	7 cut(s)	336, 897, 2046, 2347, 2527, 2792, 3019
HpyCH4IV	ACGT	7 cut(s)	1083, 1242, 1806, 1929, 2055, 2216, 2584
HpyF10VI	GCNNNNNNNGC	9 cut(s)	393, 712, 760, 956, 1721, 1759, 1962, 2234, 2243
HpyF3I	CTNAG	7 cut(s)	630, 750, 1327, 1592, 1781, 1974, 2196
HpySE526I	ACGT	7 cut(s)	1083, 1242, 1806, 1929, 2055, 2216, 2584
Hsp92I	GRCGYC	1 cut(s)	2363
HspAI	GCGC	1 cut(s)	746
KroI	GCCGGC	1 cut(s)	715
KroNI	GCCGGC	1 cut(s)	717
Ksp22I	TGATCA	2 cut(s)	1078, 1336
KspAI	GTTAAC	1 cut(s)	3039
LmnI	GCTCC	3 cut(s)	1093, 1664, 2335
Lsp1109I	GCAGC	6 cut(s)	613, 794, 1042, 1653, 1733, 2612
LweI	GCATC	4 cut(s)	769, 902, 975, 2887
MaeI	CTAG	5 cut(s)	306, 495, 921, 1641, 1673
MaeII	ACGT	7 cut(s)	1083, 1242, 1806, 1929, 2055, 2216, 2584
MaeIII	GTNAC	6 cut(s)	803, 885, 1010, 1767, 1934, 2056
MfeI	CAATTG	1 cut(s)	2481
MflI	RGATCY	1 cut(s)	1565
MhlI	GDGCHC	2 cut(s)	2213, 2332
MlyI	GAGTC	3 cut(s)	338, 1436, 2465
MmeI	TCCRAC	1 cut(s)	2972
Mph1103I	ATGCAT	1 cut(s)	838
MroNI	GCCGGC	1 cut(s)	715
MroXI	GAANNNNTTC	5 cut(s)	179, 2559, 2621, 2673, 2778
MslI	CAYNNNNRTG	2 cut(s)	1245, 1710
MspA1I	CMGCKG	1 cut(s)	1007
MspCI	CTTAAG	1 cut(s)	2824
MspI	CCGG	4 cut(s)	693, 716, 1191, 1799
MspR9I	CCNGG	4 cut(s)	168, 694, 1097, 1191
MunI	CAATTG	1 cut(s)	2481
Mva1269I	GAATGC	2 cut(s)	1916, 2621
MvaI	CCWGG	2 cut(s)	168, 1097
MvnI	CGCG	1 cut(s)	396
MwoI	GCNNNNNNNGC	9 cut(s)	393, 712, 760, 956, 1721, 1759, 1962, 2234, 2243
NaeI	GCCGGC	1 cut(s)	717
NciI	CCSGG	2 cut(s)	694, 1191
NgoMIV	GCCGGC	1 cut(s)	715
NlaIV	GGNNCC	4 cut(s)	2112, 2331, 2741, 3087
NmuCI	GTSAC	3 cut(s)	803, 1934, 2056
NsiI	ATGCAT	1 cut(s)	838
NspI	RCATGY	4 cut(s)	423, 1398, 2064, 2633
OliI	CACNNNNGTG	1 cut(s)	1245
PaeI	GCATGC	1 cut(s)	423
PaeR7I	CTCGAG	1 cut(s)	1063
PagI	TCATGA	1 cut(s)	3123
PciI	ACATGT	1 cut(s)	2060
PctI	GAATGC	2 cut(s)	1916, 2621
PdiI	GCCGGC	1 cut(s)	717
PdmI	GAANNNNTTC	5 cut(s)	179, 2559, 2621, 2673, 2778
PfeI	GAWTC	8 cut(s)	180, 1028, 1186, 1270, 1321, 1427, 2335, 2811
PflFI	GACNNNGTC	1 cut(s)	2583
PfoI	TCCNGGA	2 cut(s)	692, 1189
PkrI	GCNGC	8 cut(s)	603, 784, 1006, 1057, 1668, 1723, 2464, 2602
PleI	GAGTC	3 cut(s)	338, 1436, 2464
PmaCI	CACGTG	1 cut(s)	2056
PmlI	CACGTG	1 cut(s)	2056
PpsI	GAGTC	3 cut(s)	338, 1436, 2464
Ppu21I	YACGTR	2 cut(s)	2056, 2217
PscI	ACATGT	1 cut(s)	2060
PshAI	GACNNNNGTC	1 cut(s)	2988
Psp1406I	AACGTT	1 cut(s)	1929
Psp6I	CCWGG	2 cut(s)	166, 1095
PspCI	CACGTG	1 cut(s)	2056
PspEI	GGTNACC	1 cut(s)	1010
PspFI	CCCAGC	3 cut(s)	155, 1290, 2246
PspGI	CCWGG	2 cut(s)	166, 1095
PspN4I	GGNNCC	4 cut(s)	2112, 2331, 2741, 3087
PspPI	GGNCC	4 cut(s)	650, 1147, 1574, 2740
PspXI	VCTCGAGB	1 cut(s)	1063
PstI	CTGCAG	3 cut(s)	1060, 1723, 3116
PstNI	CAGNNNCTG	1 cut(s)	2345
PsuI	RGATCY	1 cut(s)	1565
PsyI	GACNNNGTC	1 cut(s)	2583
RsaI	GTAC	1 cut(s)	2419
RsaNI	GTAC	1 cut(s)	2418
RseI	CAYNNNNRTG	2 cut(s)	1245, 1710
SalI	GTCGAC	2 cut(s)	2286, 2508
SatI	GCNGC	8 cut(s)	602, 783, 1005, 1056, 1667, 1722, 2463, 2601
Sau96I	GGNCC	4 cut(s)	650, 1147, 1574, 2740
SchI	GAGTC	3 cut(s)	338, 1436, 2465
ScrFI	CCNGG	4 cut(s)	168, 694, 1097, 1191
SduI	GDGCHC	2 cut(s)	2213, 2332
SfaNI	GCATC	4 cut(s)	769, 902, 975, 2887
SfcI	CTRYAG	5 cut(s)	1036, 1056, 1719, 3018, 3112
Sfr274I	CTCGAG	1 cut(s)	1063
SinI	GGWCC	2 cut(s)	1147, 1574
SlaI	CTCGAG	1 cut(s)	1063
SmiMI	CAYNNNNRTG	2 cut(s)	1245, 1710
SmlI	CTYRAG	2 cut(s)	1063, 2824
SmoI	CTYRAG	2 cut(s)	1063, 2824
SnaBI	TACGTA	1 cut(s)	2217
SpeI	ACTAGT	1 cut(s)	1640
SphI	GCATGC	1 cut(s)	423
SsiI	CCGC	4 cut(s)	290, 1005, 2463, 2598
SspI	AATATT	2 cut(s)	2761, 2917
SspMI	CTAG	5 cut(s)	306, 495, 921, 1641, 1673
StyD4I	CCNGG	4 cut(s)	166, 692, 1095, 1189
StyI	CCWWGG	3 cut(s)	494, 920, 964
TaaI	ACNGT	7 cut(s)	336, 897, 2046, 2347, 2527, 2792, 3019
TaiI	ACGT	7 cut(s)	1086, 1245, 1809, 1932, 2058, 2219, 2587
TaqI	TCGA	8 cut(s)	44, 354, 1064, 2287, 2509, 2719, 2842, 2923
TauI	GCSGC	2 cut(s)	1007, 2465
TfiI	GAWTC	8 cut(s)	180, 1028, 1186, 1270, 1321, 1427, 2335, 2811
TscAI	CASTG	5 cut(s)	2049, 2204, 2273, 2884, 3022
TseFI	GTSAC	3 cut(s)	803, 1934, 2056
TseI	GCWGC	6 cut(s)	601, 782, 1055, 1666, 1721, 2600
Tsp45I	GTSAC	3 cut(s)	803, 1934, 2056
TspRI	CASTG	5 cut(s)	2049, 2204, 2273, 2884, 3022
Tth111I	GACNNNGTC	1 cut(s)	2583
Vha464I	CTTAAG	1 cut(s)	2824
VpaK11BI	GGWCC	2 cut(s)	1147, 1574
XagI	CCTNNNNNAGG	2 cut(s)	2007, 2662
XapI	RAATTY	4 cut(s)	485, 1406, 3077, 3119
XbaI	TCTAGA	2 cut(s)	305, 1672
XceI	RCATGY	4 cut(s)	423, 1398, 2064, 2633
XhoI	CTCGAG	1 cut(s)	1063
XmaJI	CCTAGG	2 cut(s)	494, 920
XmiI	GTMKAC	5 cut(s)	772, 1035, 2287, 2509, 2728
XmnI	GAANNNNTTC	5 cut(s)	179, 2559, 2621, 2673, 2778
XspI	CTAG	5 cut(s)	306, 495, 921, 1641, 1673
Zsp2I	ATGCAT	1 cut(s)	838

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.