AT4G28450

DDB1- and CUL4-associated factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0006826
Physical Location & Seq
Reverse (-)
14061403 .. 14064708
3306 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G28450.1

Sequence Viewer

Length: 1359 bp
ATGAAGATTAAGACGTTATCAAGATCGGTTGATGAATACACTCGAGAAAGAAGTCAGGATCTTCAGAGGGTCTTTCACAACTTCGACCCAAGTCTTCGACCTATGGAGAAGGCCGTGGAATACCAGAGAGCTCTTACAGCTGCCAAATTAGAAAAGATATTTGCAAGGCCGTTTGTTGGAGCAATGGATGGTCATCGTGATGGAGTCTCATGTATGGCGAAGAACCCAAATTACCTCAAAGGAATCTTCTCTGCTTCTATGGATGGAGATATTCGCCTTTGGGATATCTCTTCAAGGCGTACAGTTTGCCAATTCCCTGGTCATCAAGGTGCTGTGCGTGGTCTTACTGCATCAACCGATGGAAATGTATTGGTTTCATGCGGAACTGATTGCACTGTTCGTTTGTGGAATGTTCCTCGTCCTTCACTTGAAGATTCTAGCATTTCATCTGAGAATTTCATTGAGCCATCTGCAACCTATGTCTGGAAGAATGCTTTCTGGGCTGTTGATCATCAGTTTGAAGGTGACCTTTTTGCTACGGCCGGAGCTCAACTTGATATATGGAATCATAATAGGTCTCAGCCAGTTCAGAGTTTCCAGTGGGGAACTGACTCTGTAATATCTGTTCGGTTTAATCCTGGAGAGCCTAATTTATTGGCTACATCAGCTAGTGACCGGAGCATAACCATATATGATCTCCGCTTGTCTTCTGCGGCAAGGAAAATTATCATGATGACAAAAACAAATTCAATTGCATGGAACCCCATGGAGCCTATGAACCTGACAGCTGCTAATGAAGATGGAAGTTGCTATAGCTTTGATGGTAGAAAGTTGGACGAAGCCAAGTGCGTGCATAAAGATCATGTTTCTGCAGTGATGGATATTGACTTTTCACCGACTGGTCGTGAGTTTGTTACGGGTTCTTATGATCGATCTGTGAGAATCTTCCCATACAATGGAGGACACAGCAGGGAAATCTACCATACAAAGAGGATGCAGAGAGTATTCTGTGTCAAATATAGCTGTGATGCTACATATGTAATATCGGGCAGTGATGACACCAATCTCAGGCTATGGAAGGCAAAGGCATCAGAGCAATTGGGAGTTATTCTTCCAAGGGAACAAAAGAAGCATGAGTACAACGAGGCTGTGAAGAACCGGTACAAGCATCTTTCTGAGGTTAAGCGCATTGTGAGACACAGGCACTTGCCAAAACCAATATACAAAGCGATGGGTATCATTCGAACTGTGAACGATTCGAAGAGAAGAAAAGAAGCACGAAGGAAAGCTCACAGTGCTCCAGGAACAGTGGTCACAGCACCTCTGCGCAAAAGAAAGATCATCAAAGAAGTGGAGTGA

Protein Analysis

452

Amino Acids

51.36

Weight (kDa)

9.51

Isoelectric Point (pI)

44.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR5 PF25175 59 - 139 6.8e-15 WDR5 beta-propeller domain
WD40_CDC20-Fz PF24807 60 - 200 1e-11 CDC20/Fizzy WD40 domain
WD40_Prp19 PF24814 61 - 310 3.1e-22 Prp19 WD40 domain
WDR55 PF24796 61 - 138 2.3e-08 WDR55
Beta-prop_THOC3 PF25174 62 - 142 8.8e-11 THOC3 beta-propeller domain
Beta-prop_WDR3_1st PF25173 62 - 138 1.2e-15 WDR3 first beta-propeller domain
Beta-prop_TEP1_2nd PF25047 64 - 150 4e-10 TEP-1 second beta-propeller
Beta-prop_WDR3_2nd PF25172 64 - 137 4.2e-10 WDR3 second beta-propeller domain
WD40_WDHD1_1st PF24817 80 - 269 3.4e-13 WDHD1 first WD40 domain
WD40_Gbeta PF25391 81 - 161 4.1e-07 G protein beta WD-40 repeat protein
Beta-prop_DCAF4 PF23761 82 - 139 3.9e-07 DDB1- and CUL4-associated factor 4 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 88 - 145 2.3e-09 WDR36/Utp21 second beta-propeller domain
WD40 PF00400 102 - 137 1.6e-08 WD domain, G-beta repeat
Beta-prop_THOC3 PF25174 108 - 370 1.2e-29 THOC3 beta-propeller domain
Beta-prop_EML_2 PF23414 113 - 232 5.2e-06 Echinoderm microtubule-associated protein second beta-propeller
EIF3I PF24805 164 - 330 9.3e-08 EIF3I
Beta-prop_WDR36-Utp21_1st PF25171 178 - 316 5.1e-06 WDR36/Utp21 first beta-propeller
Beta-prop_WDR3_1st PF25173 179 - 360 5e-14 WDR3 first beta-propeller domain
WD40_CDC20-Fz PF24807 181 - 317 1e-11 CDC20/Fizzy WD40 domain
Beta-prop_EML PF23409 183 - 373 3.1e-07 Echinoderm microtubule-associated protein first beta-propeller
WD40_Gbeta PF25391 185 - 359 1.4e-09 G protein beta WD-40 repeat protein
Beta-prop_WDR5 PF25175 203 - 367 4.3e-19 WDR5 beta-propeller domain
Beta-prop_EML_2 PF23414 211 - 367 3.6e-15 Echinoderm microtubule-associated protein second beta-propeller
WDR55 PF24796 242 - 364 1.2e-08 WDR55
WD40_Prp19 PF24814 249 - 371 3.1e-08 Prp19 WD40 domain
WD40_WDHD1_1st PF24817 261 - 367 2.4e-06 WDHD1 first WD40 domain
WD40 PF00400 282 - 316 2.2e-06 WD domain, G-beta repeat
Sof1 PF04158 361 - 447 1.5e-28 Sof1-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1328
AccB7I CCANNNNNTGG 1 cut(s) 956
AciI CCGC 3 cut(s) 381, 700, 713
AclWI GGATC 1 cut(s) 66
AcoI YGGCCR 1 cut(s) 540
AcsI RAATTY 2 cut(s) 454, 745
AcuI CTGAAG 1 cut(s) 47
AfaI GTAC 3 cut(s) 301, 1139, 1163
AfiI CCNNNNNNNGG 4 cut(s) 176, 483, 956, 1068
AgeI ACCGGT 1 cut(s) 1158
AgsI TTSAA 4 cut(s) 294, 431, 521, 750
AjnI CCWGG 3 cut(s) 316, 637, 1300
AluBI AGCT 8 cut(s) 131, 140, 548, 668, 788, 816, 1023, 1289
AluI AGCT 8 cut(s) 131, 140, 548, 668, 788, 816, 1023, 1289
Alw21I GWGCWC 3 cut(s) 133, 550, 1300
Alw26I GTCTC 3 cut(s) 211, 582, 1189
AlwI GGATC 1 cut(s) 66
Ama87I CYCGRG 1 cut(s) 42
AoxI GGCC 3 cut(s) 111, 167, 540
ApeKI GCWGC 2 cut(s) 140, 788
ApoI RAATTY 2 cut(s) 454, 745
AsiGI ACCGGT 1 cut(s) 1158
Asp700I GAANNNNTTC 1 cut(s) 494
AspLEI GCGC 2 cut(s) 1188, 1329
AsuHPI GGTGA 2 cut(s) 536, 885
AsuII TTCGAA 2 cut(s) 1243, 1259
AvaI CYCGRG 1 cut(s) 42
BanII GRGCYC 2 cut(s) 133, 550
BarI GAAGNNNNNNTAC 4 cut(s) 1121, 1145, 1153, 1177
BbsI GAAGAC 2 cut(s) 86, 699
Bbv12I GWGCWC 3 cut(s) 133, 550, 1300
BbvI GCAGC 2 cut(s) 127, 775
BccI CCATC 9 cut(s) 182, 194, 257, 353, 475, 794, 815, 871, 1225
BceAI ACGGC 3 cut(s) 98, 154, 555
BciT130I CCWGG 3 cut(s) 318, 639, 1302
BclI TGATCA 1 cut(s) 508
BcoDI GTCTC 3 cut(s) 211, 582, 1189
BfaI CTAG 2 cut(s) 438, 669
BfmI CTRYAG 2 cut(s) 811, 870
BisI GCNGC 3 cut(s) 141, 714, 789
BlsI GCNGC 3 cut(s) 142, 715, 790
Bme1390I CCNGG 3 cut(s) 318, 639, 1302
BmeT110I CYCGRG 1 cut(s) 42
BmiI GGNNCC 2 cut(s) 761, 771
BmrFI CCNGG 3 cut(s) 318, 639, 1302
BmsI GCATC 5 cut(s) 359, 984, 1018, 1097, 1177
BoxI GACNNNNGTC 1 cut(s) 90
BpiI GAAGAC 2 cut(s) 86, 699
BpmI CTGGAG 2 cut(s) 660, 1284
Bpu14I TTCGAA 2 cut(s) 1243, 1259
Bsa29I ATCGAT 1 cut(s) 931
BsaBI GATNNNNATC 2 cut(s) 192, 1235
BsaI GGTCTC 1 cut(s) 582
BsaJI CCNNGG 4 cut(s) 114, 316, 765, 1115
BsaWI WCCGGW 2 cut(s) 675, 1158
Bsc4I CCNNNNNNNGG 4 cut(s) 176, 483, 956, 1068
Bse118I RCCGGY 1 cut(s) 1158
Bse1I ACTGG 3 cut(s) 584, 598, 904
Bse3DI GCAATG 1 cut(s) 189
Bse8I GATNNNNATC 2 cut(s) 192, 1235
BseBI CCWGG 3 cut(s) 318, 639, 1302
BseCI ATCGAT 1 cut(s) 931
BseDI CCNNGG 4 cut(s) 114, 316, 765, 1115
BseGI GGATG 3 cut(s) 193, 268, 999
BseJI GATNNNNATC 2 cut(s) 192, 1235
BseLI CCNNNNNNNGG 4 cut(s) 176, 483, 956, 1068
BseMI GCAATG 1 cut(s) 189
BseMII CTCAG 4 cut(s) 441, 593, 1081, 1167
BseNI ACTGG 3 cut(s) 584, 598, 904
BseX3I CGGCCG 1 cut(s) 540
BseXI GCAGC 2 cut(s) 127, 775
Bsh1285I CGRYCG 1 cut(s) 543
BshFI GGCC 3 cut(s) 113, 169, 542
BshTI ACCGGT 1 cut(s) 1158
BshVI ATCGAT 1 cut(s) 931
BsiEI CGRYCG 1 cut(s) 543
BsiHKAI GWGCWC 3 cut(s) 133, 550, 1300
BsiHKCI CYCGRG 1 cut(s) 42
BsiSI CCGG 3 cut(s) 543, 676, 1159
BslI CCNNNNNNNGG 4 cut(s) 176, 483, 956, 1068
BsmAI GTCTC 3 cut(s) 211, 582, 1189
BsmI GAATGC 1 cut(s) 496
BsnI GGCC 3 cut(s) 113, 169, 542
Bso31I GGTCTC 1 cut(s) 582
BsoBI CYCGRG 1 cut(s) 42
Bsp119I TTCGAA 2 cut(s) 1243, 1259
Bsp1286I GDGCHC 3 cut(s) 133, 550, 1300
Bsp143I GATC 8 cut(s) 23, 58, 508, 694, 859, 928, 932, 1338
Bsp19I CCATGG 1 cut(s) 765
BspACI CCGC 3 cut(s) 381, 700, 713
BspANI GGCC 3 cut(s) 113, 169, 542
BspCNI CTCAG 4 cut(s) 442, 592, 1080, 1168
BspDI ATCGAT 1 cut(s) 931
BspHI TCATGA 1 cut(s) 729
BspLI GGNNCC 2 cut(s) 761, 771
BspMAI CTGCAG 1 cut(s) 874
BspPI GGATC 1 cut(s) 66
BspT104I TTCGAA 2 cut(s) 1243, 1259
BspTNI GGTCTC 1 cut(s) 582
BsrDI GCAATG 1 cut(s) 189
BsrFI RCCGGY 1 cut(s) 1158
BsrI ACTGG 3 cut(s) 584, 598, 904
BssAI RCCGGY 1 cut(s) 1158
BssECI CCNNGG 4 cut(s) 114, 316, 765, 1115
BssMI GATC 8 cut(s) 23, 58, 508, 694, 859, 928, 932, 1338
BssT1I CCWWGG 2 cut(s) 765, 1115
Bst2UI CCWGG 3 cut(s) 318, 639, 1302
Bst4CI ACNGT 5 cut(s) 304, 397, 1249, 1295, 1309
Bst6I CTCTTC 2 cut(s) 295, 1256
BstBI TTCGAA 2 cut(s) 1243, 1259
BstC8I GCNNGC 1 cut(s) 851
BstDEI CTNAG 4 cut(s) 450, 579, 1067, 1176
BstDSI CCRYGG 2 cut(s) 114, 765
BstEII GGTNACC 1 cut(s) 524
BstF5I GGATG 3 cut(s) 193, 268, 999
BstHHI GCGC 2 cut(s) 1188, 1329
BstKTI GATC 8 cut(s) 26, 61, 511, 697, 862, 931, 935, 1341
BstMAI GTCTC 3 cut(s) 211, 582, 1189
BstMBI GATC 8 cut(s) 23, 58, 508, 694, 859, 928, 932, 1338
BstMCI CGRYCG 1 cut(s) 543
BstMWI GCNNNNNNNGC 4 cut(s) 137, 500, 665, 1295
BstNI CCWGG 3 cut(s) 318, 639, 1302
BstPAI GACNNNNGTC 1 cut(s) 90
BstPI GGTNACC 1 cut(s) 524
BstSCI CCNGG 3 cut(s) 316, 637, 1300
BstSFI CTRYAG 2 cut(s) 811, 870
BstV1I GCAGC 2 cut(s) 127, 775
BstV2I GAAGAC 2 cut(s) 86, 699
BstX2I RGATCY 1 cut(s) 58
BstXI CCANNNNNNTGG 1 cut(s) 317
BstYI RGATCY 1 cut(s) 58
BstZI CGGCCG 1 cut(s) 540
Bsu15I ATCGAT 1 cut(s) 931
BsuRI GGCC 3 cut(s) 113, 169, 542
BsuTUI ATCGAT 1 cut(s) 931
BtgI CCRYGG 2 cut(s) 114, 765
BtgZI GCGATG 1 cut(s) 1244
BtsCI GGATG 3 cut(s) 193, 268, 999
BtsI GCAGTG 2 cut(s) 879, 1057
BtsIMutI CAGTG 6 cut(s) 393, 605, 879, 1057, 1300, 1314
Cac8I GCNNGC 1 cut(s) 851
CciI TCATGA 1 cut(s) 729
CfoI GCGC 2 cut(s) 1188, 1329
Cfr10I RCCGGY 1 cut(s) 1158
ClaI ATCGAT 1 cut(s) 931
Csp6I GTAC 3 cut(s) 300, 1138, 1162
CspAI ACCGGT 1 cut(s) 1158
CviAII CATG 7 cut(s) 210, 378, 730, 756, 766, 863, 1133
CviQI GTAC 3 cut(s) 300, 1138, 1162
DdeI CTNAG 4 cut(s) 450, 579, 1067, 1176
DpnI GATC 8 cut(s) 25, 60, 510, 696, 861, 930, 934, 1340
DpnII GATC 8 cut(s) 23, 58, 508, 694, 859, 928, 932, 1338
EaeI YGGCCR 1 cut(s) 540
EagI CGGCCG 1 cut(s) 540
Eam1104I CTCTTC 2 cut(s) 295, 1256
EarI CTCTTC 2 cut(s) 295, 1256
Ecl136II GAGCTC 2 cut(s) 131, 548
EclXI CGGCCG 1 cut(s) 540
Eco130I CCWWGG 2 cut(s) 765, 1115
Eco24I GRGCYC 2 cut(s) 133, 550
Eco31I GGTCTC 1 cut(s) 582
Eco32I GATATC 1 cut(s) 286
Eco52I CGGCCG 1 cut(s) 540
Eco53kI GAGCTC 2 cut(s) 131, 548
Eco57I CTGAAG 1 cut(s) 47
Eco88I CYCGRG 1 cut(s) 42
Eco91I GGTNACC 1 cut(s) 524
EcoICRI GAGCTC 2 cut(s) 131, 548
EcoO65I GGTNACC 1 cut(s) 524
EcoRII CCWGG 3 cut(s) 316, 637, 1300
EcoRV GATATC 1 cut(s) 286
EcoT14I CCWWGG 2 cut(s) 765, 1115
EcoT38I GRGCYC 2 cut(s) 133, 550
ErhI CCWWGG 2 cut(s) 765, 1115
FaeI CATG 7 cut(s) 213, 381, 733, 759, 769, 866, 1136
FalI AAGNNNNNCTT 2 cut(s) 513, 545
FatI CATG 7 cut(s) 209, 377, 729, 755, 765, 862, 1132
FauNDI CATATG 1 cut(s) 1036
FbaI TGATCA 1 cut(s) 508
Fnu4HI GCNGC 3 cut(s) 141, 714, 789
FokI GGATG 3 cut(s) 200, 275, 1006
FriOI GRGCYC 2 cut(s) 133, 550
Fsp4HI GCNGC 3 cut(s) 141, 714, 789
FspBI CTAG 2 cut(s) 438, 669
FspI TGCGCA 1 cut(s) 1328
GlaI GCGC 2 cut(s) 1187, 1328
GluI GCNGC 3 cut(s) 141, 714, 789
GsuI CTGGAG 2 cut(s) 660, 1284
HaeIII GGCC 3 cut(s) 113, 169, 542
HapII CCGG 3 cut(s) 543, 676, 1159
HhaI GCGC 2 cut(s) 1188, 1329
Hin1II CATG 7 cut(s) 213, 381, 733, 759, 769, 866, 1136
Hin6I GCGC 2 cut(s) 1186, 1327
HinP1I GCGC 2 cut(s) 1186, 1327
HinfI GANTC 7 cut(s) 204, 243, 434, 565, 611, 942, 1256
HpaII CCGG 3 cut(s) 543, 676, 1159
HphI GGTGA 2 cut(s) 536, 885
Hpy166II GTNNAC 1 cut(s) 1252
Hpy188I TCNGA 5 cut(s) 66, 451, 591, 1093, 1177
Hpy188III TCNNGA 7 cut(s) 21, 44, 56, 197, 484, 730, 905
Hpy8I GTNNAC 1 cut(s) 1252
HpyAV CCTTC 5 cut(s) 103, 432, 515, 1072, 1275
HpyCH4III ACNGT 5 cut(s) 304, 397, 1249, 1295, 1309
HpyCH4IV ACGT 1 cut(s) 14
HpyCH4V TGCA 8 cut(s) 164, 350, 393, 473, 755, 853, 872, 997
HpyF10VI GCNNNNNNNGC 4 cut(s) 137, 500, 665, 1295
HpyF3I CTNAG 4 cut(s) 450, 579, 1067, 1176
HpySE526I ACGT 1 cut(s) 14
Hsp92II CATG 7 cut(s) 213, 381, 733, 759, 769, 866, 1136
HspAI GCGC 2 cut(s) 1186, 1327
Ksp22I TGATCA 1 cut(s) 508
Kzo9I GATC 8 cut(s) 23, 58, 508, 694, 859, 928, 932, 1338
LmnI GCTCC 5 cut(s) 179, 545, 678, 769, 1303
Lsp1109I GCAGC 2 cut(s) 127, 775
LweI GCATC 5 cut(s) 359, 984, 1018, 1097, 1177
MaeI CTAG 2 cut(s) 438, 669
MaeII ACGT 1 cut(s) 14
MaeIII GTNAC 4 cut(s) 524, 671, 913, 1312
MalI GATC 8 cut(s) 25, 60, 510, 696, 861, 930, 934, 1340
MboI GATC 8 cut(s) 23, 58, 508, 694, 859, 928, 932, 1338
MfeI CAATTG 2 cut(s) 750, 1097
MflI RGATCY 1 cut(s) 58
MhlI GDGCHC 3 cut(s) 133, 550, 1300
MluCI AATT 9 cut(s) 146, 229, 311, 454, 649, 723, 745, 750, 1097
MlyI GAGTC 2 cut(s) 213, 605
MmeI TCCRAC 2 cut(s) 157, 813
MnlI CCTC 8 cut(s) 60, 245, 426, 953, 984, 1138, 1171, 1332
MroXI GAANNNNTTC 1 cut(s) 494
MseI TTAA 3 cut(s) 9, 633, 1182
MslI CAYNNNNRTG 2 cut(s) 198, 327
MspA1I CMGCKG 2 cut(s) 140, 788
MspI CCGG 3 cut(s) 543, 676, 1159
MspR9I CCNGG 3 cut(s) 318, 639, 1302
MunI CAATTG 2 cut(s) 750, 1097
Mva1269I GAATGC 1 cut(s) 496
MvaI CCWGG 3 cut(s) 318, 639, 1302
MwoI GCNNNNNNNGC 4 cut(s) 137, 500, 665, 1295
NcoI CCATGG 1 cut(s) 765
NdeI CATATG 1 cut(s) 1036
NdeII GATC 8 cut(s) 23, 58, 508, 694, 859, 928, 932, 1338
NlaIII CATG 7 cut(s) 213, 381, 733, 759, 769, 866, 1136
NlaIV GGNNCC 2 cut(s) 761, 771
NmuCI GTSAC 3 cut(s) 524, 671, 1312
NsbI TGCGCA 1 cut(s) 1328
NspV TTCGAA 2 cut(s) 1243, 1259
PaeR7I CTCGAG 1 cut(s) 42
PagI TCATGA 1 cut(s) 729
PctI GAATGC 1 cut(s) 496
PdmI GAANNNNTTC 1 cut(s) 494
PfeI GAWTC 5 cut(s) 243, 434, 565, 942, 1256
PflMI CCANNNNNTGG 1 cut(s) 956
PfoI TCCNGGA 2 cut(s) 637, 1300
PinAI ACCGGT 1 cut(s) 1158
PkrI GCNGC 3 cut(s) 142, 715, 790
PleI GAGTC 2 cut(s) 212, 605
PpsI GAGTC 2 cut(s) 212, 605
PshAI GACNNNNGTC 1 cut(s) 90
Psp124BI GAGCTC 2 cut(s) 133, 550
Psp6I CCWGG 3 cut(s) 316, 637, 1300
PspEI GGTNACC 1 cut(s) 524
PspGI CCWGG 3 cut(s) 316, 637, 1300
PspN4I GGNNCC 2 cut(s) 761, 771
PsrI GAACNNNNNNTAC 4 cut(s) 215, 247, 609, 641
PstI CTGCAG 1 cut(s) 874
PsuI RGATCY 1 cut(s) 58
PvuII CAGCTG 2 cut(s) 140, 788
RsaI GTAC 3 cut(s) 301, 1139, 1163
RsaNI GTAC 3 cut(s) 300, 1138, 1162
RseI CAYNNNNRTG 2 cut(s) 198, 327
SacI GAGCTC 2 cut(s) 133, 550
SaqAI TTAA 3 cut(s) 9, 633, 1182
SatI GCNGC 3 cut(s) 141, 714, 789
Sau3AI GATC 8 cut(s) 23, 58, 508, 694, 859, 928, 932, 1338
SchI GAGTC 2 cut(s) 213, 605
ScrFI CCNGG 3 cut(s) 318, 639, 1302
SduI GDGCHC 3 cut(s) 133, 550, 1300
SfaNI GCATC 5 cut(s) 359, 984, 1018, 1097, 1177
SfcI CTRYAG 2 cut(s) 811, 870
Sfr274I CTCGAG 1 cut(s) 42
SfuI TTCGAA 2 cut(s) 1243, 1259
SlaI CTCGAG 1 cut(s) 42
SmiMI CAYNNNNRTG 2 cut(s) 198, 327
SmlI CTYRAG 1 cut(s) 42
SmoI CTYRAG 1 cut(s) 42
Sse9I AATT 9 cut(s) 146, 229, 311, 454, 649, 723, 745, 750, 1097
SsiI CCGC 3 cut(s) 381, 700, 713
SspMI CTAG 2 cut(s) 438, 669
SstI GAGCTC 2 cut(s) 133, 550
StyD4I CCNGG 3 cut(s) 316, 637, 1300
StyI CCWWGG 2 cut(s) 765, 1115
TaaI ACNGT 5 cut(s) 304, 397, 1249, 1295, 1309
TaiI ACGT 1 cut(s) 17
TaqI TCGA 6 cut(s) 43, 84, 97, 931, 1243, 1259
TasI AATT 9 cut(s) 146, 229, 311, 454, 649, 723, 745, 750, 1097
TatI WGTACW 1 cut(s) 1137
TauI GCSGC 1 cut(s) 716
TfiI GAWTC 5 cut(s) 243, 434, 565, 942, 1256
Tru1I TTAA 3 cut(s) 9, 633, 1182
Tru9I TTAA 3 cut(s) 9, 633, 1182
TscAI CASTG 6 cut(s) 400, 605, 879, 1057, 1300, 1314
TseFI GTSAC 3 cut(s) 524, 671, 1312
TseI GCWGC 2 cut(s) 140, 788
Tsp45I GTSAC 3 cut(s) 524, 671, 1312
TspDTI ATGAA 7 cut(s) 17, 48, 366, 435, 448, 791, 810
TspRI CASTG 6 cut(s) 400, 605, 879, 1057, 1300, 1314
Van91I CCANNNNNTGG 1 cut(s) 956
XapI RAATTY 2 cut(s) 454, 745
XhoI CTCGAG 1 cut(s) 42
XmnI GAANNNNTTC 1 cut(s) 494
XspI CTAG 2 cut(s) 438, 669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.