Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0006826

Physical Location & Seq

Genomic Coordinates Forward (+)

9257620 .. 9264086

Gene Structure 6467 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g10410.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1359 bp

ATGAAGGTGAAAGTAATATCCCGGTCCACAGATGAACATACAAAAGAACGGAGCCAAGACCTCCAGAGAGTGTTCCACAATTACGACCCCACCATTCGAACCCAAGAGAAGGCCGTGGAGTATGTTCGTGCGCTTAATGCCGCCAAATTAGACAGGATTTTCGCAAAGCCGTTTGTTGGAGCAATGGATGGGCATGTAGATGCTATTTCGTGCATGGCCAAAAACATGAACCATTTGGTTGGGATATTCTCCGGTTCTATGGATGGAGATATTCGGCTTTGGGATATAGCTTCCAGGCGCACAGTTCAGCGGTTTCCTGGCCACCAAGGTGCTGTGCGAGGTTTAGCAGTATCTACAGATGGACGGGTACTTGTTTCTTGTGGAACTGATTGCAGTGTCAGGCTCTGGGCCATACCTATTTCCACTGCTATGGAGCTAGATGTCCTTACTGATAACTCTGTTGAGCCTCTGGAAACTTATGTGTGGAAAAATGCATTTAGGTCTGTTGATCACCAATGGAATTTTGATCGTTTTGCCACAGGTGGAGCTGGTGTAGATATATGGAACCACAACAGGTCTGCACCAGAACAGAGTCTCGAATGGGGAACAGACACAGTTATATCTGTCCGGTTTAATCCTGGACAGCCTGAACTTTTGGCAACATCTGCAAGTGATCGCAGCATAGCATTATATGACTTGCGCATGGGGAAACCGACAACGAAGCTTATCATGGCGACAAAAACCAATTCTATTTGTTGGAATCCAATGGAGCCATTCAACTTCACTGCTGCAAATGAGGACTGCAACTGCTATAGCTTTGATTGTAGAAAGCTTAATGCAGCAACGTGTGTGCACAAAGATCATGTCTCTGCTGTGATGGACATAGATTATTCACCAACTGGTCGAGAATTTGTAACCGGATCATATGATAGAACAGTGAGAATTTTCCAGTATAATGGTGGTCACAGTAGGGAGATTTATCATACAAAGAGAATGCAAAGGGTTTTCTGTGTCAAGTACAGCTGTGATGCTAGTTATGTTATTTCTGGGAGTGATGACACTAATCTTAGGCTTTGGAAGGCTAAAGCATCAGAACAACTGGGTGTTCTTCTTCCAAGGGAAAAGAAAAGGCATGAATATCTGGAAGCTGTCAAGAATCGCTACAAGCACCTCGCTGAAGTGAAGCGTATAGTGAGGCACCGCCACTTGCCGAAAGCAATATACAAGACAACTGCTCTCCGGCGTACAATGATTGAAGCAGAACGCAGGAGAGAAGAGAAGAGGAAAGCTCACAGTGCCCCAGGAAGCTCTACATCAAAGCCATTACGGCAGAGAAGAATTGTGCGTGTTGAGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000462 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030684 GO:0031461 GO:0031974 GO:0031981 GO:0032040 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0080008 GO:0090304 GO:1901360 GO:1902494 GO:1990234 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sof1 WD40

Protein Analysis

453

Amino Acids

51.58

Weight (kDa)

9.43

Isoelectric Point (pI)

42.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR5	PF25175	1 - 91	3.1e-15	WDR5 beta-propeller domain
WD40_CDC20-Fz	PF24807	1 - 78	1.1e-11	CDC20/Fizzy WD40 domain
WDR55	PF24796	2 - 77	2.2e-08	WDR55
Beta-prop_WDR3_1st	PF25173	2 - 87	1.5e-15	WDR3 first beta-propeller domain
WD40_Gbeta	PF25391	3 - 80	9.6e-08	G protein beta WD-40 repeat protein
Beta-prop_THOC3	PF25174	3 - 75	1.7e-08	THOC3 beta-propeller domain
Beta-prop_WDR36-Utp21_1st	PF25171	3 - 76	8e-06	WDR36/Utp21 first beta-propeller
Beta-prop_TEP1_2nd	PF25047	4 - 76	1.1e-08	TEP-1 second beta-propeller
Beta-prop_WDR3_2nd	PF25172	4 - 76	6.8e-11	WDR3 second beta-propeller domain
WD40_Prp19	PF24814	8 - 126	1.1e-10	Prp19 WD40 domain
Beta-prop_DCAF4	PF23761	21 - 77	2.2e-07	DDB1- and CUL4-associated factor 4 beta-propeller domain
WD40_WDHD1_1st	PF24817	21 - 195	2.9e-09	WDHD1 first WD40 domain
Beta-prop_WDR36-Utp21_2nd	PF25168	27 - 83	3e-10	WDR36/Utp21 second beta-propeller domain
WD40	PF00400	40 - 75	9.6e-09	WD domain, G-beta repeat
Beta-prop_THOC3	PF25174	106 - 298	1.2e-23	THOC3 beta-propeller domain
WD40_Prp19	PF24814	120 - 249	3.1e-08	Prp19 WD40 domain
Beta-prop_EML	PF23409	123 - 315	4.6e-06	Echinoderm microtubule-associated protein first beta-propeller
WD40_CDC20-Fz	PF24807	124 - 258	9.5e-12	CDC20/Fizzy WD40 domain
Beta-prop_WDR5	PF25175	142 - 314	4.8e-20	WDR5 beta-propeller domain
WD40_Prp19	PF24814	145 - 303	6.4e-12	Prp19 WD40 domain
Beta-prop_EML_2	PF23414	150 - 306	8.5e-14	Echinoderm microtubule-associated protein second beta-propeller
WD40_Gbeta	PF25391	159 - 312	4.4e-10	G protein beta WD-40 repeat protein
WDR55	PF24796	184 - 304	7.1e-09	WDR55
Beta-prop_WDR3_1st	PF25173	201 - 306	2.7e-10	WDR3 first beta-propeller domain
WD40_WDHD1_1st	PF24817	204 - 306	2e-06	WDHD1 first WD40 domain
WD40	PF00400	222 - 255	2.5e-06	WD domain, G-beta repeat
WD40_Prp19	PF24814	224 - 305	2.8e-07	Prp19 WD40 domain
Sof1	PF04158	300 - 386	2.9e-28	Sof1-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0006826)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28450
fragaria_vesca	FvH4_2g10410 FvH4_2g10410
malus_domestica	MD08G1220200.v1.1 MD15G1410600.v1.1 MD15G1410700.v1.1
prunus_persica	Prupe.1G573700_v2.0.a1 Prupe.1G573700_v2.0.a1 Prupe.3G166600_v2.0.a1 Prupe.6G177000_v2.0.a1 Prupe.6G177000_v2.0.a1 Prupe.6G177000_v2.0.a1 Prupe.6G177000_v2.0.a1
pyrus_communis	pycom08g19110 pycom15g36550
rosa_chinensis	RchiOBHm_Chr6g0267881
rosa_laevigata	RLG00000013973
rosa_multiflora	Rmu_co8335391.1_g000001 Rmu_sc0000434.1_g000004 Rmu_sc0005400.1_g000008
rosa_roxburghii	Rroxscaffold_7G00200360
rosa_rugosa	Rorug06G0034600
rosa_samantha	Rh6AG156600 Rh6BG157800 Rh6DG143000
rosa_wichuraiana	Rw6G013600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	701
AccB1I	GGYRCC	1 cut(s)	1197
AciI	CCGC	3 cut(s)	141, 310, 1201
AclWI	GGATC	1 cut(s)	928
AcoI	YGGCCR	2 cut(s)	216, 319
AcsI	RAATTY	3 cut(s)	520, 908, 942
AcuI	CTGAAG	1 cut(s)	1197
AfaI	GTAC	3 cut(s)	369, 1019, 1246
AfiI	CCNNNNNNNGG	2 cut(s)	109, 176
AflIII	ACRYGT	1 cut(s)	845
AgsI	TTSAA	2 cut(s)	778, 1256
AjnI	CCWGG	4 cut(s)	293, 316, 637, 1300
AleI	CACNNNNGTG	1 cut(s)	327
Alw21I	GWGCWC	1 cut(s)	855
Alw26I	GTCTC	2 cut(s)	599, 871
Alw44I	GTGCAC	1 cut(s)	851
AlwI	GGATC	1 cut(s)	928
AlwNI	CAGNNNCTG	1 cut(s)	405
AoxI	GGCC	4 cut(s)	111, 216, 319, 408
ApaLI	GTGCAC	1 cut(s)	851
ApeKI	GCWGC	3 cut(s)	678, 788, 839
ApoI	RAATTY	3 cut(s)	520, 908, 942
ArsI	GACNNNNNNTTYG	4 cut(s)	143, 175, 849, 881
AspLEI	GCGC	3 cut(s)	133, 300, 702
AspS9I	GGNCC	2 cut(s)	24, 408
AsuC2I	CCSGG	1 cut(s)	22
AsuHPI	GGTGA	3 cut(s)	19, 503, 885
AsuII	TTCGAA	1 cut(s)	97
AvaII	GGWCC	1 cut(s)	24
BaeGI	GKGCMC	2 cut(s)	855, 1300
BalI	TGGCCA	2 cut(s)	218, 321
BanI	GGYRCC	1 cut(s)	1197
Bbv12I	GWGCWC	1 cut(s)	855
BbvI	GCAGC	3 cut(s)	690, 775, 851
BccI	CCATC	4 cut(s)	182, 257, 353, 871
BceAI	ACGGC	3 cut(s)	98, 154, 1343
BciT130I	CCWGG	4 cut(s)	295, 318, 639, 1302
BclI	TGATCA	1 cut(s)	508
BcnI	CCSGG	1 cut(s)	22
BcoDI	GTCTC	2 cut(s)	599, 871
BfaI	CTAG	2 cut(s)	437, 1032
BfmI	CTRYAG	2 cut(s)	354, 811
BglI	GCCNNNNNGGC	1 cut(s)	1327
BisI	GCNGC	4 cut(s)	141, 679, 789, 840
BlsI	GCNGC	4 cut(s)	142, 680, 790, 841
Bme1390I	CCNGG	5 cut(s)	22, 295, 318, 639, 1302
Bme18I	GGWCC	1 cut(s)	24
BmgT120I	GGNCC	2 cut(s)	24, 408
BmiI	GGNNCC	4 cut(s)	53, 566, 771, 1199
BmrFI	CCNGG	5 cut(s)	22, 295, 318, 639, 1302
BmrI	ACTGGG	1 cut(s)	1109
BmsI	GCATC	3 cut(s)	190, 1018, 1097
BmuI	ACTGGG	1 cut(s)	1109
BplI	GAGNNNNNCTC	2 cut(s)	1273, 1305
BpmI	CTGGAG	1 cut(s)	47
Bpu14I	TTCGAA	1 cut(s)	97
BpuMI	CCSGG	1 cut(s)	22
BsaJI	CCNNGG	4 cut(s)	114, 325, 1115, 1300
BsaWI	WCCGGW	3 cut(s)	251, 627, 917
BsaXI	ACNNNNNCTCC	2 cut(s)	537, 567
Bsc4I	CCNNNNNNNGG	2 cut(s)	109, 176
Bse1I	ACTGG	3 cut(s)	904, 949, 1104
Bse3DI	GCAATG	1 cut(s)	189
BseBI	CCWGG	4 cut(s)	295, 318, 639, 1302
BseDI	CCNNGG	4 cut(s)	114, 325, 1115, 1300
BseGI	GGATG	2 cut(s)	193, 268
BseLI	CCNNNNNNNGG	2 cut(s)	109, 176
BseMI	GCAATG	1 cut(s)	189
BseNI	ACTGG	3 cut(s)	904, 949, 1104
BseSI	GKGCMC	2 cut(s)	855, 1300
BseXI	GCAGC	3 cut(s)	690, 775, 851
BsgI	GTGCAG	1 cut(s)	564
BshFI	GGCC	4 cut(s)	113, 218, 321, 410
BshNI	GGYRCC	1 cut(s)	1197
BsiHKAI	GWGCWC	1 cut(s)	855
BsiSI	CCGG	5 cut(s)	22, 252, 628, 918, 1240
BslI	CCNNNNNNNGG	2 cut(s)	109, 176
BsmAI	GTCTC	2 cut(s)	599, 871
BsmI	GAATGC	1 cut(s)	999
BsnI	GGCC	4 cut(s)	113, 218, 321, 410
Bsp119I	TTCGAA	1 cut(s)	97
Bsp1286I	GDGCHC	2 cut(s)	855, 1300
Bsp143I	GATC	5 cut(s)	508, 526, 673, 859, 920
BspACI	CCGC	3 cut(s)	141, 310, 1201
BspANI	GGCC	4 cut(s)	113, 218, 321, 410
BspLI	GGNNCC	4 cut(s)	53, 566, 771, 1199
BspPI	GGATC	1 cut(s)	928
BspT104I	TTCGAA	1 cut(s)	97
BspT107I	GGYRCC	1 cut(s)	1197
BsrDI	GCAATG	1 cut(s)	189
BsrI	ACTGG	3 cut(s)	904, 949, 1104
BssECI	CCNNGG	4 cut(s)	114, 325, 1115, 1300
BssMI	GATC	5 cut(s)	508, 526, 673, 859, 920
BssT1I	CCWWGG	2 cut(s)	325, 1115
Bst2UI	CCWGG	4 cut(s)	295, 318, 639, 1302
Bst4CI	ACNGT	5 cut(s)	304, 616, 937, 968, 1295
Bst6I	CTCTTC	2 cut(s)	1269, 1274
BstAPI	GCANNNNNTGC	1 cut(s)	665
BstBI	TTCGAA	1 cut(s)	97
BstDEI	CTNAG	1 cut(s)	1067
BstDSI	CCRYGG	1 cut(s)	114
BstF5I	GGATG	2 cut(s)	193, 268
BstHHI	GCGC	3 cut(s)	133, 300, 702
BstKTI	GATC	5 cut(s)	511, 529, 676, 862, 923
BstMAI	GTCTC	2 cut(s)	599, 871
BstMBI	GATC	5 cut(s)	508, 526, 673, 859, 920
BstMWI	GCNNNNNNNGC	4 cut(s)	137, 665, 1295, 1327
BstNI	CCWGG	4 cut(s)	295, 318, 639, 1302
BstNSI	RCATGY	1 cut(s)	197
BstSCI	CCNGG	5 cut(s)	20, 293, 316, 637, 1300
BstSFI	CTRYAG	2 cut(s)	354, 811
BstSLI	GKGCMC	2 cut(s)	855, 1300
BstV1I	GCAGC	3 cut(s)	690, 775, 851
BstXI	CCANNNNNNTGG	3 cut(s)	239, 430, 956
BsuRI	GGCC	4 cut(s)	113, 218, 321, 410
BtgI	CCRYGG	1 cut(s)	114
BtsCI	GGATG	2 cut(s)	193, 268
BtsI	GCAGTG	3 cut(s)	400, 423, 783
BtsIMutI	CAGTG	5 cut(s)	400, 423, 783, 942, 1300
CaiI	CAGNNNCTG	1 cut(s)	405
CfoI	GCGC	3 cut(s)	133, 300, 702
Cfr13I	GGNCC	2 cut(s)	24, 408
Csp6I	GTAC	3 cut(s)	368, 1018, 1245
CviAII	CATG	7 cut(s)	194, 214, 226, 703, 730, 863, 1133
CviQI	GTAC	3 cut(s)	368, 1018, 1245
DdeI	CTNAG	1 cut(s)	1067
DpnI	GATC	5 cut(s)	510, 528, 675, 861, 922
DpnII	GATC	5 cut(s)	508, 526, 673, 859, 920
EaeI	YGGCCR	2 cut(s)	216, 319
Eam1104I	CTCTTC	2 cut(s)	1269, 1274
EarI	CTCTTC	2 cut(s)	1269, 1274
Eco130I	CCWWGG	2 cut(s)	325, 1115
Eco47I	GGWCC	1 cut(s)	24
Eco57I	CTGAAG	1 cut(s)	1197
EcoRII	CCWGG	4 cut(s)	293, 316, 637, 1300
EcoT14I	CCWWGG	2 cut(s)	325, 1115
EcoT22I	ATGCAT	1 cut(s)	496
ErhI	CCWWGG	2 cut(s)	325, 1115
FaeI	CATG	7 cut(s)	197, 217, 229, 706, 733, 866, 1136
FatI	CATG	7 cut(s)	193, 213, 225, 702, 729, 862, 1132
FauNDI	CATATG	1 cut(s)	925
FbaI	TGATCA	1 cut(s)	508
Fnu4HI	GCNGC	4 cut(s)	141, 679, 789, 840
FokI	GGATG	2 cut(s)	200, 275
Fsp4HI	GCNGC	4 cut(s)	141, 679, 789, 840
FspBI	CTAG	2 cut(s)	437, 1032
FspI	TGCGCA	1 cut(s)	701
GlaI	GCGC	3 cut(s)	132, 299, 701
GluI	GCNGC	4 cut(s)	141, 679, 789, 840
GsuI	CTGGAG	1 cut(s)	47
HaeIII	GGCC	4 cut(s)	113, 218, 321, 410
HapII	CCGG	5 cut(s)	22, 252, 628, 918, 1240
HhaI	GCGC	3 cut(s)	133, 300, 702
Hin1II	CATG	7 cut(s)	197, 217, 229, 706, 733, 866, 1136
Hin6I	GCGC	3 cut(s)	131, 298, 700
HinP1I	GCGC	3 cut(s)	131, 298, 700
HindIII	AAGCTT	2 cut(s)	722, 830
HinfI	GANTC	3 cut(s)	592, 760, 1156
HpaII	CCGG	5 cut(s)	22, 252, 628, 918, 1240
HphI	GGTGA	3 cut(s)	19, 503, 885
Hpy166II	GTNNAC	2 cut(s)	27, 853
Hpy188I	TCNGA	1 cut(s)	1093
Hpy188III	TCNNGA	6 cut(s)	64, 470, 596, 905, 1142, 1153
Hpy8I	GTNNAC	2 cut(s)	27, 853
HpyAV	CCTTC	2 cut(s)	103, 1072
HpyCH4III	ACNGT	5 cut(s)	304, 616, 937, 968, 1295
HpyCH4IV	ACGT	1 cut(s)	845
HpyF10VI	GCNNNNNNNGC	4 cut(s)	137, 665, 1295, 1327
HpyF3I	CTNAG	1 cut(s)	1067
HpySE526I	ACGT	1 cut(s)	845
Hsp92II	CATG	7 cut(s)	197, 217, 229, 706, 733, 866, 1136
HspAI	GCGC	3 cut(s)	131, 298, 700
Ksp22I	TGATCA	1 cut(s)	508
Kzo9I	GATC	5 cut(s)	508, 526, 673, 859, 920
LmnI	GCTCC	5 cut(s)	51, 179, 433, 545, 769
Lsp1109I	GCAGC	3 cut(s)	690, 775, 851
LweI	GCATC	3 cut(s)	190, 1018, 1097
MaeI	CTAG	2 cut(s)	437, 1032
MaeII	ACGT	1 cut(s)	845
MaeIII	GTNAC	2 cut(s)	913, 962
MalI	GATC	5 cut(s)	510, 528, 675, 861, 922
MboI	GATC	5 cut(s)	508, 526, 673, 859, 920
MboII	GAAGA	5 cut(s)	1100, 1103, 1286, 1291, 1347
MhlI	GDGCHC	2 cut(s)	855, 1300
MlsI	TGGCCA	2 cut(s)	218, 321
MluCI	AATT	7 cut(s)	79, 146, 520, 745, 908, 942, 1338
MluNI	TGGCCA	2 cut(s)	218, 321
MlyI	GAGTC	1 cut(s)	601
MmeI	TCCRAC	2 cut(s)	157, 737
MnlI	CCTC	8 cut(s)	71, 332, 477, 790, 1181, 1188, 1275, 1345
Mox20I	TGGCCA	2 cut(s)	218, 321
Mph1103I	ATGCAT	1 cut(s)	496
MscI	TGGCCA	2 cut(s)	218, 321
MseI	TTAA	3 cut(s)	135, 633, 834
MslI	CAYNNNNRTG	3 cut(s)	198, 327, 428
Msp20I	TGGCCA	2 cut(s)	218, 321
MspA1I	CMGCKG	2 cut(s)	310, 1023
MspI	CCGG	5 cut(s)	22, 252, 628, 918, 1240
MspR9I	CCNGG	5 cut(s)	22, 295, 318, 639, 1302
Mva1269I	GAATGC	1 cut(s)	999
MvaI	CCWGG	4 cut(s)	295, 318, 639, 1302
MwoI	GCNNNNNNNGC	4 cut(s)	137, 665, 1295, 1327
NciI	CCSGG	1 cut(s)	22
NdeI	CATATG	1 cut(s)	925
NdeII	GATC	5 cut(s)	508, 526, 673, 859, 920
NlaIII	CATG	7 cut(s)	197, 217, 229, 706, 733, 866, 1136
NlaIV	GGNNCC	4 cut(s)	53, 566, 771, 1199
NmuCI	GTSAC	1 cut(s)	962
NsbI	TGCGCA	1 cut(s)	701
NsiI	ATGCAT	1 cut(s)	496
NspI	RCATGY	1 cut(s)	197
NspV	TTCGAA	1 cut(s)	97
OliI	CACNNNNGTG	1 cut(s)	327
PctI	GAATGC	1 cut(s)	999
PfeI	GAWTC	2 cut(s)	760, 1156
PfoI	TCCNGGA	1 cut(s)	637
PkrI	GCNGC	4 cut(s)	142, 680, 790, 841
PleI	GAGTC	1 cut(s)	600
PpsI	GAGTC	1 cut(s)	600
Psp6I	CCWGG	4 cut(s)	293, 316, 637, 1300
PspGI	CCWGG	4 cut(s)	293, 316, 637, 1300
PspN4I	GGNNCC	4 cut(s)	53, 566, 771, 1199
PspPI	GGNCC	2 cut(s)	24, 408
PstNI	CAGNNNCTG	1 cut(s)	405
PvuII	CAGCTG	1 cut(s)	1023
RsaI	GTAC	3 cut(s)	369, 1019, 1246
RsaNI	GTAC	3 cut(s)	368, 1018, 1245
RseI	CAYNNNNRTG	3 cut(s)	198, 327, 428
SaqAI	TTAA	3 cut(s)	135, 633, 834
SatI	GCNGC	4 cut(s)	141, 679, 789, 840
Sau3AI	GATC	5 cut(s)	508, 526, 673, 859, 920
Sau96I	GGNCC	2 cut(s)	24, 408
SchI	GAGTC	1 cut(s)	601
ScrFI	CCNGG	5 cut(s)	22, 295, 318, 639, 1302
SduI	GDGCHC	2 cut(s)	855, 1300
SfaNI	GCATC	3 cut(s)	190, 1018, 1097
SfcI	CTRYAG	2 cut(s)	354, 811
SfuI	TTCGAA	1 cut(s)	97
SinI	GGWCC	1 cut(s)	24
SmiMI	CAYNNNNRTG	3 cut(s)	198, 327, 428
Sse9I	AATT	7 cut(s)	79, 146, 520, 745, 908, 942, 1338
SsiI	CCGC	3 cut(s)	141, 310, 1201
SspMI	CTAG	2 cut(s)	437, 1032
StyD4I	CCNGG	5 cut(s)	20, 293, 316, 637, 1300
StyI	CCWWGG	2 cut(s)	325, 1115
TaaI	ACNGT	5 cut(s)	304, 616, 937, 968, 1295
TaiI	ACGT	1 cut(s)	848
TaqI	TCGA	3 cut(s)	97, 597, 904
TasI	AATT	7 cut(s)	79, 146, 520, 745, 908, 942, 1338
TatI	WGTACW	1 cut(s)	1017
TauI	GCSGC	1 cut(s)	143
TfiI	GAWTC	2 cut(s)	760, 1156
Tru1I	TTAA	3 cut(s)	135, 633, 834
Tru9I	TTAA	3 cut(s)	135, 633, 834
TscAI	CASTG	5 cut(s)	400, 430, 790, 942, 1300
TseFI	GTSAC	1 cut(s)	962
TseI	GCWGC	3 cut(s)	678, 788, 839
Tsp45I	GTSAC	1 cut(s)	962
TspDTI	ATGAA	4 cut(s)	17, 48, 242, 1149
TspGWI	ACGGA	1 cut(s)	64
TspRI	CASTG	5 cut(s)	400, 430, 790, 942, 1300
VneI	GTGCAC	1 cut(s)	851
VpaK11BI	GGWCC	1 cut(s)	24
XapI	RAATTY	3 cut(s)	520, 908, 942
XceI	RCATGY	1 cut(s)	197
XcmI	CCANNNNNNNNNTGG	1 cut(s)	956
XspI	CTAG	2 cut(s)	437, 1032
Zsp2I	ATGCAT	1 cut(s)	496

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.