Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007164

Physical Location & Seq

Genomic Coordinates Reverse (-)

15516776 .. 15519996

Gene Structure 3221 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G32120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1038 bp

ATGGAGAGCTTACCAACGACGGTCTCAGGGAAATCAGACCGGCGAGGTAGGTTTTCCAAGTCTCAGAACACCTCCAAGCCCTCTCTTATCTTGGCCTTCTTCTCTTGTCTTGCTTGGCTCTACGTCGCTGGCCGGTTATGGCAAGATGCGCAGTACAGAGCAGCACTCAATACTGTGCTTAAGATGAATTATGATCAGAGGCCTAAGGTTCTTACGGTGGAGGACAAACTTGTGGTCCTTGGATGCAAAGATCTTGAGAGGAGAATTGTTGAAACTGAAATGGAGTTGGCACAGGCAAAGAGTCAAGGCTATCTTAAAAAACAGAAAAGTGTCTCTTCTTCAGGGAAGAAAATGCTAGCTGTTATTGGAGTTTACACAGGCTTTGGAAGTCACTTGAAGCGCAATAAATTTAGAGGCTCTTGGATGCCACGAGATGATGCTCTTAAAAAACTTGAGGAAAGAGGAGTTGTCATACGCTTTGTGATTGGTCGGAGTGCTAACCGAGGTGATAGCCTAGATAGAAAAATTGACGAAGAAAATCGTGCAACTAAAGACTTTTTGATTCTTGAGAATCACGAGGAAGCCCAAGAAGAGTTACCGAAGAAAGTGAAGTTCTTCTACAGTGCTGCTGTTCAGAATTGGGACGCAGAGTTTTATGTCAAAGTTGATGACAACGTTGACTTGGATCTTGAGGGGATGATTGCGCTTCTTGAAAGTCGTCGTAGTCAAGATGGTGCTTACATTGGGTGCATGAAATCTGGAGATGTGATTACTGAAGAGGGAAGTCAATGGTATGAGCCTGAGTGGTGGAAATTTGGGGACGACAAATCGTATTTCCGTCATGCAACTGGTTCGCTGGTAATACTCTCAAAGAATCTGGCTCAGTATGTCAATATAAACAGTGGATTGTTGAAGACATATGCGTTTGATGATACCACCATTGGATCATGGATGATTGGCGTCCAGGCAACATATATAGACGACAATCGCCTTTGCTGCAGCAGCACAAGACAAGAAAAAGTGTGTTCCATGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006029 GO:0006464 GO:0006486 GO:0006493 GO:0006807 GO:0008150 GO:0008152 GO:0008378 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0010384 GO:0010404 GO:0010405 GO:0016740 GO:0016757 GO:0016758 GO:0018193 GO:0018208 GO:0018258 GO:0019538 GO:0034645 GO:0036211 GO:0043170 GO:0043412 GO:0043413 GO:0044036 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0070085 GO:0071554 GO:0071704 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1990714

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4094 Galactosyl_T

Protein Analysis

345

Amino Acids

39.27

Weight (kDa)

8.55

Isoelectric Point (pI)

42.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF4094	PF13334	25 - 102	2e-08	Domain of unknown function (DUF4094)
Galactosyl_T	PF01762	133 - 327	3.5e-31	Galactosyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007164)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25300 AT2G25300 AT4G32120
fragaria_vesca	FvH4_2g28760
malus_domestica	MD08G1157300.v1.1 MD08G1157500.v1.1 MD15G1128400.v1.1
prunus_persica	Prupe.1G483700_v2.0.a1 Prupe.1G483700_v2.0.a1
pyrus_communis	pycom08g12950
rosa_chinensis	RchiOBHm_Chr6g0297521
rosa_laevigata	RLG00000011587
rosa_multiflora	Rmu_sc0003740.1_g000002 Rmu_sc0008467.1_g000001 Rmu_sc0042947.1_g000001 Rmu_ssc0000319.1_g000001
rosa_roxburghii	Rroxscaffold_7G00170400
rosa_rugosa	Rorug06G0273100 Rorug06G0273100 Rorug06G0273200
rosa_samantha	Rh6AG384200 Rh6BG392300 Rh6CG398200 Rh6DG384700
rosa_wichuraiana	Rw6G033460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	150
AclI	AACGTT	1 cut(s)	675
AclWI	GGATC	2 cut(s)	693, 952
AcoI	YGGCCR	1 cut(s)	130
AcsI	RAATTY	2 cut(s)	407, 812
AcuI	CTGAAG	2 cut(s)	324, 795
AcyI	GRCGYC	1 cut(s)	960
AfaI	GTAC	1 cut(s)	155
AflII	CTTAAG	1 cut(s)	179
AgsI	TTSAA	4 cut(s)	272, 397, 713, 913
AjnI	CCWGG	1 cut(s)	963
AluBI	AGCT	2 cut(s)	9, 359
AluI	AGCT	2 cut(s)	9, 359
Alw26I	GTCTC	3 cut(s)	28, 66, 337
AlwI	GGATC	2 cut(s)	693, 952
AoxI	GGCC	3 cut(s)	93, 130, 200
ApeKI	GCWGC	5 cut(s)	161, 626, 996, 999, 1002
ApoI	RAATTY	2 cut(s)	407, 812
ArsI	GACNNNNNNTTYG	2 cut(s)	219, 251
Asp700I	GAANNNNTTC	1 cut(s)	614
AspLEI	GCGC	3 cut(s)	151, 402, 706
AspS9I	GGNCC	1 cut(s)	235
AsuHPI	GGTGA	1 cut(s)	518
AsuNHI	GCTAGC	1 cut(s)	355
AvaII	GGWCC	1 cut(s)	235
AxyI	CCTNAGG	1 cut(s)	204
BarI	GAAGNNNNNNTAC	2 cut(s)	602, 634
BauI	CACGAG	2 cut(s)	429, 575
BbsI	GAAGAC	1 cut(s)	920
BbvI	GCAGC	5 cut(s)	173, 613, 983, 1011, 1014
BccI	CCATC	1 cut(s)	725
BcgI	CGANNNNNNTGC	2 cut(s)	834, 868
BciT130I	CCWGG	1 cut(s)	965
BclI	TGATCA	1 cut(s)	193
BcoDI	GTCTC	3 cut(s)	28, 66, 337
BfaI	CTAG	2 cut(s)	356, 515
BfmI	CTRYAG	2 cut(s)	619, 997
BfrI	CTTAAG	1 cut(s)	179
BglII	AGATCT	1 cut(s)	250
BisI	GCNGC	5 cut(s)	162, 627, 997, 1000, 1003
BlsI	GCNGC	5 cut(s)	163, 628, 998, 1001, 1004
Bme1390I	CCNGG	1 cut(s)	965
Bme18I	GGWCC	1 cut(s)	235
BmgT120I	GGNCC	1 cut(s)	235
BmrFI	CCNGG	1 cut(s)	965
BmsI	GCATC	4 cut(s)	136, 233, 414, 427
BmtI	GCTAGC	1 cut(s)	359
BpiI	GAAGAC	1 cut(s)	920
BplI	GAGNNNNNCTC	2 cut(s)	150, 182
BpmI	CTGGAG	1 cut(s)	780
BpuEI	CTTGAG	4 cut(s)	275, 473, 587, 710
BsaHI	GRCGYC	1 cut(s)	960
BsaI	GGTCTC	1 cut(s)	28
BsaJI	CCNNGG	3 cut(s)	238, 502, 1029
Bse118I	RCCGGY	2 cut(s)	39, 132
Bse1I	ACTGG	1 cut(s)	853
Bse21I	CCTNAGG	1 cut(s)	204
BseBI	CCWGG	1 cut(s)	965
BseDI	CCNNGG	3 cut(s)	238, 502, 1029
BseGI	GGATG	4 cut(s)	248, 429, 702, 957
BseMII	CTCAG	4 cut(s)	39, 77, 792, 896
BseNI	ACTGG	1 cut(s)	853
BseRI	GAGGAG	2 cut(s)	274, 477
BseXI	GCAGC	5 cut(s)	173, 613, 983, 1011, 1014
BshFI	GGCC	3 cut(s)	95, 132, 202
BsiSI	CCGG	2 cut(s)	40, 133
BslFI	GGGAC	2 cut(s)	656, 833
BsmAI	GTCTC	3 cut(s)	28, 66, 337
BsmFI	GGGAC	2 cut(s)	656, 833
BsnI	GGCC	3 cut(s)	95, 132, 202
Bso31I	GGTCTC	1 cut(s)	28
Bsp143I	GATC	4 cut(s)	193, 250, 685, 944
Bsp19I	CCATGG	1 cut(s)	1029
BspANI	GGCC	3 cut(s)	95, 132, 202
BspCNI	CTCAG	4 cut(s)	38, 76, 793, 895
BspMAI	CTGCAG	1 cut(s)	1001
BspOI	GCTAGC	1 cut(s)	359
BspPI	GGATC	2 cut(s)	693, 952
BspTI	CTTAAG	1 cut(s)	179
BspTNI	GGTCTC	1 cut(s)	28
BsrFI	RCCGGY	2 cut(s)	39, 132
BsrI	ACTGG	1 cut(s)	853
BssAI	RCCGGY	2 cut(s)	39, 132
BssECI	CCNNGG	3 cut(s)	238, 502, 1029
BssMI	GATC	4 cut(s)	193, 250, 685, 944
BssNI	GRCGYC	1 cut(s)	960
BssSI	CACGAG	2 cut(s)	429, 575
BssT1I	CCWWGG	2 cut(s)	238, 1029
Bst2BI	CACGAG	2 cut(s)	429, 575
Bst2UI	CCWGG	1 cut(s)	965
Bst4CI	ACNGT	5 cut(s)	22, 175, 217, 623, 902
Bst6I	CTCTTC	3 cut(s)	340, 585, 771
BstACI	GRCGYC	1 cut(s)	960
BstAFI	CTTAAG	1 cut(s)	179
BstC8I	GCNNGC	2 cut(s)	130, 357
BstDEI	CTNAG	5 cut(s)	25, 63, 204, 801, 882
BstDSI	CCRYGG	1 cut(s)	1029
BstF5I	GGATG	4 cut(s)	248, 429, 702, 957
BstHHI	GCGC	3 cut(s)	151, 402, 706
BstKTI	GATC	4 cut(s)	196, 253, 688, 947
BstMAI	GTCTC	3 cut(s)	28, 66, 337
BstMBI	GATC	4 cut(s)	193, 250, 685, 944
BstMWI	GCNNNNNNNGC	3 cut(s)	148, 996, 1002
BstNI	CCWGG	1 cut(s)	965
BstSCI	CCNGG	1 cut(s)	963
BstSFI	CTRYAG	2 cut(s)	619, 997
BstV1I	GCAGC	5 cut(s)	173, 613, 983, 1011, 1014
BstV2I	GAAGAC	1 cut(s)	920
BstX2I	RGATCY	2 cut(s)	250, 685
BstYI	RGATCY	2 cut(s)	250, 685
Bsu36I	CCTNAGG	1 cut(s)	204
BsuRI	GGCC	3 cut(s)	95, 132, 202
BtgI	CCRYGG	1 cut(s)	1029
BtsCI	GGATG	4 cut(s)	248, 429, 702, 957
BtsIMutI	CAGTG	2 cut(s)	628, 907
Cac8I	GCNNGC	2 cut(s)	130, 357
CfoI	GCGC	3 cut(s)	151, 402, 706
Cfr10I	RCCGGY	2 cut(s)	39, 132
Cfr13I	GGNCC	1 cut(s)	235
CseI	GACGC	2 cut(s)	653, 949
Csp6I	GTAC	1 cut(s)	154
CviAII	CATG	5 cut(s)	751, 842, 948, 1030, 1035
CviQI	GTAC	1 cut(s)	154
DdeI	CTNAG	5 cut(s)	25, 63, 204, 801, 882
DpnI	GATC	4 cut(s)	195, 252, 687, 946
DpnII	GATC	4 cut(s)	193, 250, 685, 944
EaeI	YGGCCR	1 cut(s)	130
Eam1104I	CTCTTC	3 cut(s)	340, 585, 771
EarI	CTCTTC	3 cut(s)	340, 585, 771
Eco130I	CCWWGG	2 cut(s)	238, 1029
Eco147I	AGGCCT	1 cut(s)	202
Eco31I	GGTCTC	1 cut(s)	28
Eco47I	GGWCC	1 cut(s)	235
Eco57I	CTGAAG	2 cut(s)	324, 795
Eco81I	CCTNAGG	1 cut(s)	204
EcoRII	CCWGG	1 cut(s)	963
EcoT14I	CCWWGG	2 cut(s)	238, 1029
ErhI	CCWWGG	2 cut(s)	238, 1029
FaeI	CATG	5 cut(s)	754, 845, 951, 1033, 1038
FalI	AAGNNNNNCTT	4 cut(s)	297, 329, 319, 351
FaqI	GGGAC	2 cut(s)	656, 833
FatI	CATG	5 cut(s)	750, 841, 947, 1029, 1034
FauNDI	CATATG	1 cut(s)	919
FbaI	TGATCA	1 cut(s)	193
Fnu4HI	GCNGC	5 cut(s)	162, 627, 997, 1000, 1003
FokI	GGATG	4 cut(s)	255, 436, 709, 964
Fsp4HI	GCNGC	5 cut(s)	162, 627, 997, 1000, 1003
FspBI	CTAG	2 cut(s)	356, 515
FspI	TGCGCA	1 cut(s)	150
GlaI	GCGC	3 cut(s)	150, 401, 705
GluI	GCNGC	5 cut(s)	162, 627, 997, 1000, 1003
GsuI	CTGGAG	1 cut(s)	780
HaeIII	GGCC	3 cut(s)	95, 132, 202
HapII	CCGG	2 cut(s)	40, 133
HgaI	GACGC	2 cut(s)	653, 949
HhaI	GCGC	3 cut(s)	151, 402, 706
Hin1I	GRCGYC	1 cut(s)	960
Hin1II	CATG	5 cut(s)	754, 845, 951, 1033, 1038
Hin6I	GCGC	3 cut(s)	149, 400, 704
HinP1I	GCGC	3 cut(s)	149, 400, 704
HincII	GTYRAC	1 cut(s)	679
HindII	GTYRAC	1 cut(s)	679
HinfI	GANTC	4 cut(s)	301, 562, 571, 874
HpaII	CCGG	2 cut(s)	40, 133
HphI	GGTGA	1 cut(s)	518
Hpy166II	GTNNAC	2 cut(s)	373, 679
Hpy188I	TCNGA	5 cut(s)	37, 66, 198, 492, 636
Hpy188III	TCNNGA	7 cut(s)	254, 566, 575, 689, 710, 728, 759
Hpy8I	GTNNAC	2 cut(s)	373, 679
Hpy99I	CGWCG	3 cut(s)	22, 128, 723
HpyAV	CCTTC	1 cut(s)	106
HpyCH4III	ACNGT	5 cut(s)	22, 175, 217, 623, 902
HpyCH4IV	ACGT	2 cut(s)	123, 675
HpyCH4V	TGCA	5 cut(s)	246, 545, 750, 845, 999
HpyF10VI	GCNNNNNNNGC	3 cut(s)	148, 996, 1002
HpyF3I	CTNAG	5 cut(s)	25, 63, 204, 801, 882
HpySE526I	ACGT	2 cut(s)	123, 675
Hsp92I	GRCGYC	1 cut(s)	960
Hsp92II	CATG	5 cut(s)	754, 845, 951, 1033, 1038
HspAI	GCGC	3 cut(s)	149, 400, 704
Ksp22I	TGATCA	1 cut(s)	193
Kzo9I	GATC	4 cut(s)	193, 250, 685, 944
Lsp1109I	GCAGC	5 cut(s)	173, 613, 983, 1011, 1014
LweI	GCATC	4 cut(s)	136, 233, 414, 427
MaeI	CTAG	2 cut(s)	356, 515
MaeII	ACGT	2 cut(s)	123, 675
MaeIII	GTNAC	2 cut(s)	389, 594
MalI	GATC	4 cut(s)	195, 252, 687, 946
MboI	GATC	4 cut(s)	193, 250, 685, 944
MflI	RGATCY	2 cut(s)	250, 685
MluCI	AATT	6 cut(s)	187, 264, 407, 525, 637, 812
MlyI	GAGTC	1 cut(s)	310
MmeI	TCCRAC	1 cut(s)	470
MroXI	GAANNNNTTC	1 cut(s)	614
MseI	TTAA	3 cut(s)	180, 315, 444
MspCI	CTTAAG	1 cut(s)	179
MspI	CCGG	2 cut(s)	40, 133
MspR9I	CCNGG	1 cut(s)	965
MvaI	CCWGG	1 cut(s)	965
MwoI	GCNNNNNNNGC	3 cut(s)	148, 996, 1002
NcoI	CCATGG	1 cut(s)	1029
NdeI	CATATG	1 cut(s)	919
NdeII	GATC	4 cut(s)	193, 250, 685, 944
NheI	GCTAGC	1 cut(s)	355
NlaIII	CATG	5 cut(s)	754, 845, 951, 1033, 1038
NmuCI	GTSAC	1 cut(s)	389
NsbI	TGCGCA	1 cut(s)	150
PceI	AGGCCT	1 cut(s)	202
PdmI	GAANNNNTTC	1 cut(s)	614
PfeI	GAWTC	3 cut(s)	562, 571, 874
PkrI	GCNGC	5 cut(s)	163, 628, 998, 1001, 1004
PleI	GAGTC	1 cut(s)	309
PpsI	GAGTC	1 cut(s)	309
Psp1406I	AACGTT	1 cut(s)	675
Psp6I	CCWGG	1 cut(s)	963
PspGI	CCWGG	1 cut(s)	963
PspPI	GGNCC	1 cut(s)	235
PstI	CTGCAG	1 cut(s)	1001
PsuI	RGATCY	2 cut(s)	250, 685
RsaI	GTAC	1 cut(s)	155
RsaNI	GTAC	1 cut(s)	154
SaqAI	TTAA	3 cut(s)	180, 315, 444
SatI	GCNGC	5 cut(s)	162, 627, 997, 1000, 1003
Sau3AI	GATC	4 cut(s)	193, 250, 685, 944
Sau96I	GGNCC	1 cut(s)	235
SchI	GAGTC	1 cut(s)	310
ScrFI	CCNGG	1 cut(s)	965
SetI	ASST	9 cut(s)	11, 49, 53, 74, 126, 210, 361, 508, 678
SfaNI	GCATC	4 cut(s)	136, 233, 414, 427
SfcI	CTRYAG	2 cut(s)	619, 997
SinI	GGWCC	1 cut(s)	235
SmlI	CTYRAG	5 cut(s)	179, 254, 452, 566, 689
SmoI	CTYRAG	5 cut(s)	179, 254, 452, 566, 689
Sse9I	AATT	6 cut(s)	187, 264, 407, 525, 637, 812
SseBI	AGGCCT	1 cut(s)	202
SspMI	CTAG	2 cut(s)	356, 515
StuI	AGGCCT	1 cut(s)	202
StyD4I	CCNGG	1 cut(s)	963
StyI	CCWWGG	2 cut(s)	238, 1029
TaaI	ACNGT	5 cut(s)	22, 175, 217, 623, 902
TaiI	ACGT	2 cut(s)	126, 678
TasI	AATT	6 cut(s)	187, 264, 407, 525, 637, 812
TatI	WGTACW	1 cut(s)	153
TfiI	GAWTC	3 cut(s)	562, 571, 874
Tru1I	TTAA	3 cut(s)	180, 315, 444
Tru9I	TTAA	3 cut(s)	180, 315, 444
TscAI	CASTG	2 cut(s)	628, 907
TseFI	GTSAC	1 cut(s)	389
TseI	GCWGC	5 cut(s)	161, 626, 996, 999, 1002
Tsp45I	GTSAC	1 cut(s)	389
TspDTI	ATGAA	2 cut(s)	200, 767
TspGWI	ACGGA	1 cut(s)	827
TspRI	CASTG	2 cut(s)	628, 907
Vha464I	CTTAAG	1 cut(s)	179
VpaK11BI	GGWCC	1 cut(s)	235
XapI	RAATTY	2 cut(s)	407, 812
XmnI	GAANNNNTTC	1 cut(s)	614
XspI	CTAG	2 cut(s)	356, 515

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.