Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009416

Physical Location & Seq

Genomic Coordinates Forward (+)

15602721 .. 15605400

Gene Structure 2680 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G32320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 990 bp

ATGACGACGACGACTGCTTCTCTGGTTAAGACTTTTCTGTTTCGGTGCGACTCGTTTTCATCTTTCAAATTCAAATGCAAATTCGAATCTCCCGCGAAAACGCGATTGCTCTCTCCGGCGACCGAGAAACATGTTGTCAGATCGTCAAGAGCCTGGCGTATTCGTTGCTTATCCGATGATCCTGGTTCGAGTCATGTTTTCGTTGCAAGTAGAAGGAAAATGGTAGTCTTGTTGTCGACGGTGCAGCTTCTGTCTCATATGCTTCCGCAAAACGGGAACGCAGCTGAGATTTATCCGGTGATGCAAAACGAAATAAGGAAAGTGGTGACAAAGGGCAAGGCTGCTGGTGTGCTTCGTTTAGTGTTTCATGATGCTGGAACCTTTGAACTGGACGATCATTCTGGTGGCATCAACGGATCTATTGCTTATGAACTTGAGAGACCTGAGAACATAGGTTTGAAGAAATCCTTAAAGGTTCTAGCGAAAGCAAAGGTTAAGGTTGACGAGATACAACCAGTGTCTTGGGCGGATATGATCTCTGTCGCTGGGTCTGAAGCAGTTTCAATATGTGGCGGCCCAACAATTCCAGTAGTTTTGGGAAGACTTGATTCAGCGCAACCTGATCCAGAAGGCAAGCTACCTCCAGAAACCCTGAGTGCCTCGGGATTGAAAGAATGCTTCAAAAGAAAAGGATTTTCGACCCAGGAGCTTGTTGCCTTATCTGGGGCACATACGATTGGGAGTAAAGGCTTTGGAGATCCGACAGTTTTTGACAATGCATACTACAAAATCCTTCTTGAAAAACCATGGACGTCAACTTCTAAGATGACGAGCATGGTCGGGCTTCCTTCGGATCATGCTTTAGTGCAGGATGATGAGTGCTTAAGGTGGGTGAAACGGTATGCAGAAGACCAAGACAAGTTCTTCGAAGACTTCACAAATGCTTATATCAAACTAGTAAATTCTGGGGCCAAATGGAATATGTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000302 GO:0003006 GO:0003674 GO:0003824 GO:0004130 GO:0004601 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0006979 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009636 GO:0009791 GO:0009845 GO:0009987 GO:0010154 GO:0010431 GO:0016209 GO:0016491 GO:0016684 GO:0016999 GO:0017001 GO:0017144 GO:0021700 GO:0022414 GO:0032501 GO:0032502 GO:0032504 GO:0033554 GO:0034599 GO:0042221 GO:0042737 GO:0042743 GO:0042744 GO:0044237 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051186 GO:0051187 GO:0051716 GO:0055114 GO:0061458 GO:0070887 GO:0071695 GO:0072593 GO:0090351 GO:0097237 GO:0098754 GO:0098869 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00053 ko00480 map00053 map00480

Pfam Domains

Protein Families

peroxidase

Protein Analysis

329

Amino Acids

36.24

Weight (kDa)

8.99

Isoelectric Point (pI)

39.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
peroxidase	PF00141	103 - 304	1e-42	Peroxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009416)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32320
fragaria_vesca	FvH4_2g29080 FvH4_2g29080 FvH4_2g29080 FvH4_2g29080 FvH4_2g29080
malus_domestica	MD15G1125400.v1.1
prunus_persica	Prupe.1G481000_v2.0.a1
pyrus_communis	pycom08g12640
rosa_chinensis	RchiOBHm_Chr6g0297961
rosa_laevigata	RLG00000011548
rosa_multiflora	Rmu_sc0007302.1_g000002 Rmu_sc0034417.1_g000001
rosa_roxburghii	Rroxscaffold_7G00170050 Rroxscaffold_7G00178890
rosa_rugosa	Rorug06G0277100 Rorug06G0277200
rosa_samantha	Rh6AG387700 Rh6CG401900 Rh6DG388200
rosa_wichuraiana	Rw6G033770 Rw6G033830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	815
AccI	GTMKAC	1 cut(s)	236
AccII	CGCG	2 cut(s)	95, 103
AciI	CCGC	4 cut(s)	93, 266, 527, 573
AclWI	GGATC	5 cut(s)	173, 424, 617, 752, 861
AcsI	RAATTY	3 cut(s)	68, 80, 961
AcuI	CTGAAG	1 cut(s)	573
AcyI	GRCGYC	1 cut(s)	812
AfiI	CCNNNNNNNGG	2 cut(s)	272, 723
AflII	CTTAAG	1 cut(s)	883
AflIII	ACRYGT	1 cut(s)	130
AgsI	TTSAA	8 cut(s)	67, 73, 386, 460, 564, 670, 682, 800
AhlI	ACTAGT	1 cut(s)	955
AjnI	CCWGG	3 cut(s)	152, 181, 702
AluBI	AGCT	4 cut(s)	247, 284, 637, 709
AluI	AGCT	4 cut(s)	247, 284, 637, 709
Alw26I	GTCTC	2 cut(s)	258, 433
AlwI	GGATC	5 cut(s)	173, 424, 617, 752, 861
AlwNI	CAGNNNCTG	1 cut(s)	250
Ama87I	CYCGRG	1 cut(s)	661
AoxI	GGCC	2 cut(s)	574, 969
ApeKI	GCWGC	3 cut(s)	244, 281, 341
ApoI	RAATTY	3 cut(s)	68, 80, 961
ArsI	GACNNNNNNTTYG	2 cut(s)	908, 940
AspLEI	GCGC	1 cut(s)	616
AspS9I	GGNCC	2 cut(s)	575, 969
AsuHPI	GGTGA	3 cut(s)	310, 337, 904
AsuII	TTCGAA	2 cut(s)	84, 927
AvaI	CYCGRG	1 cut(s)	661
BaeGI	GKGCMC	1 cut(s)	730
BarI	GAAGNNNNNNTAC	2 cut(s)	621, 653
BbsI	GAAGAC	3 cut(s)	607, 915, 936
BbvI	GCAGC	3 cut(s)	256, 293, 328
BciT130I	CCWGG	3 cut(s)	154, 183, 704
BcoDI	GTCTC	2 cut(s)	258, 433
BcuI	ACTAGT	1 cut(s)	955
BfaI	CTAG	2 cut(s)	479, 956
BfrI	CTTAAG	1 cut(s)	883
BisI	GCNGC	4 cut(s)	245, 282, 342, 574
BlsI	GCNGC	4 cut(s)	246, 283, 343, 575
Bme1390I	CCNGG	3 cut(s)	154, 183, 704
BmeT110I	CYCGRG	1 cut(s)	661
BmgT120I	GGNCC	2 cut(s)	575, 969
BmiI	GGNNCC	2 cut(s)	379, 970
BmrFI	CCNGG	3 cut(s)	154, 183, 704
BmsI	GCATC	3 cut(s)	291, 361, 417
BpiI	GAAGAC	3 cut(s)	607, 915, 936
BpmI	CTGGAG	1 cut(s)	627
Bpu14I	TTCGAA	2 cut(s)	84, 927
BpuEI	CTTGAG	1 cut(s)	455
BsaHI	GRCGYC	1 cut(s)	812
BsaI	GGTCTC	1 cut(s)	433
BsaJI	CCNNGG	3 cut(s)	660, 702, 806
BsaWI	WCCGGW	1 cut(s)	295
Bsc4I	CCNNNNNNNGG	2 cut(s)	272, 723
Bse1I	ACTGG	3 cut(s)	393, 515, 587
BseBI	CCWGG	3 cut(s)	154, 183, 704
BseDI	CCNNGG	3 cut(s)	660, 702, 806
BseGI	GGATG	1 cut(s)	877
BseLI	CCNNNNNNNGG	2 cut(s)	272, 723
BseMII	CTCAG	3 cut(s)	276, 435, 644
BseNI	ACTGG	3 cut(s)	393, 515, 587
BseSI	GKGCMC	1 cut(s)	730
BseXI	GCAGC	3 cut(s)	256, 293, 328
BseYI	CCCAGC	1 cut(s)	545
BsgI	GTGCAG	2 cut(s)	263, 887
Bsh1236I	CGCG	2 cut(s)	95, 103
Bsh1285I	CGRYCG	1 cut(s)	123
BshFI	GGCC	2 cut(s)	576, 971
BsiEI	CGRYCG	1 cut(s)	123
BsiHKCI	CYCGRG	1 cut(s)	661
BsiSI	CCGG	2 cut(s)	116, 296
BslI	CCNNNNNNNGG	2 cut(s)	272, 723
BsmAI	GTCTC	2 cut(s)	258, 433
BsmI	GAATGC	1 cut(s)	680
BsnI	GGCC	2 cut(s)	576, 971
Bso31I	GGTCTC	1 cut(s)	433
BsoBI	CYCGRG	1 cut(s)	661
Bsp119I	TTCGAA	2 cut(s)	84, 927
Bsp1286I	GDGCHC	1 cut(s)	730
Bsp143I	GATC	8 cut(s)	140, 178, 394, 416, 534, 622, 757, 853
Bsp19I	CCATGG	1 cut(s)	806
BspACI	CCGC	4 cut(s)	93, 266, 527, 573
BspANI	GGCC	2 cut(s)	576, 971
BspCNI	CTCAG	3 cut(s)	277, 436, 645
BspFNI	CGCG	2 cut(s)	95, 103
BspHI	TCATGA	1 cut(s)	367
BspLI	GGNNCC	2 cut(s)	379, 970
BspPI	GGATC	5 cut(s)	173, 424, 617, 752, 861
BspT104I	TTCGAA	2 cut(s)	84, 927
BspTI	CTTAAG	1 cut(s)	883
BspTNI	GGTCTC	1 cut(s)	433
BsrI	ACTGG	3 cut(s)	393, 515, 587
BssECI	CCNNGG	3 cut(s)	660, 702, 806
BssMI	GATC	8 cut(s)	140, 178, 394, 416, 534, 622, 757, 853
BssNI	GRCGYC	1 cut(s)	812
BssT1I	CCWWGG	1 cut(s)	806
Bst2UI	CCWGG	3 cut(s)	154, 183, 704
Bst4CI	ACNGT	3 cut(s)	241, 766, 900
BstACI	GRCGYC	1 cut(s)	812
BstAFI	CTTAAG	1 cut(s)	883
BstBI	TTCGAA	2 cut(s)	84, 927
BstC8I	GCNNGC	1 cut(s)	635
BstDEI	CTNAG	4 cut(s)	285, 444, 653, 822
BstDSI	CCRYGG	1 cut(s)	806
BstF5I	GGATG	1 cut(s)	877
BstFNI	CGCG	2 cut(s)	95, 103
BstHHI	GCGC	1 cut(s)	616
BstKTI	GATC	8 cut(s)	143, 181, 397, 419, 537, 625, 760, 856
BstMAI	GTCTC	2 cut(s)	258, 433
BstMBI	GATC	8 cut(s)	140, 178, 394, 416, 534, 622, 757, 853
BstMCI	CGRYCG	1 cut(s)	123
BstNI	CCWGG	3 cut(s)	154, 183, 704
BstNSI	RCATGY	1 cut(s)	134
BstSCI	CCNGG	3 cut(s)	152, 181, 702
BstSLI	GKGCMC	1 cut(s)	730
BstUI	CGCG	2 cut(s)	95, 103
BstV1I	GCAGC	3 cut(s)	256, 293, 328
BstV2I	GAAGAC	3 cut(s)	607, 915, 936
BstX2I	RGATCY	2 cut(s)	416, 757
BstXI	CCANNNNNNTGG	1 cut(s)	522
BstYI	RGATCY	2 cut(s)	416, 757
BsuRI	GGCC	2 cut(s)	576, 971
BtgI	CCRYGG	1 cut(s)	806
BtsCI	GGATG	1 cut(s)	877
BtsIMutI	CAGTG	1 cut(s)	522
Cac8I	GCNNGC	1 cut(s)	635
CaiI	CAGNNNCTG	1 cut(s)	250
CciI	TCATGA	1 cut(s)	367
CfoI	GCGC	1 cut(s)	616
Cfr13I	GGNCC	2 cut(s)	575, 969
CviAII	CATG	6 cut(s)	131, 194, 368, 807, 835, 857
DdeI	CTNAG	4 cut(s)	285, 444, 653, 822
DpnI	GATC	8 cut(s)	142, 180, 396, 418, 536, 624, 759, 855
DpnII	GATC	8 cut(s)	140, 178, 394, 416, 534, 622, 757, 853
EciI	GGCGGA	1 cut(s)	542
Eco130I	CCWWGG	1 cut(s)	806
Eco31I	GGTCTC	1 cut(s)	433
Eco57I	CTGAAG	1 cut(s)	573
Eco88I	CYCGRG	1 cut(s)	661
EcoRII	CCWGG	3 cut(s)	152, 181, 702
EcoT14I	CCWWGG	1 cut(s)	806
EcoT22I	ATGCAT	1 cut(s)	781
ErhI	CCWWGG	1 cut(s)	806
FaeI	CATG	6 cut(s)	134, 197, 371, 810, 838, 860
FalI	AAGNNNNNCTT	2 cut(s)	452, 484
FatI	CATG	6 cut(s)	130, 193, 367, 806, 834, 856
FauI	CCCGC	1 cut(s)	100
FauNDI	CATATG	1 cut(s)	258
FblI	GTMKAC	1 cut(s)	236
Fnu4HI	GCNGC	4 cut(s)	245, 282, 342, 574
FokI	GGATG	1 cut(s)	884
Fsp4HI	GCNGC	4 cut(s)	245, 282, 342, 574
FspBI	CTAG	2 cut(s)	479, 956
GlaI	GCGC	1 cut(s)	615
GluI	GCNGC	4 cut(s)	245, 282, 342, 574
GsaI	CCCAGC	1 cut(s)	549
GsuI	CTGGAG	1 cut(s)	627
HaeIII	GGCC	2 cut(s)	576, 971
HapII	CCGG	2 cut(s)	116, 296
HhaI	GCGC	1 cut(s)	616
Hin1I	GRCGYC	1 cut(s)	812
Hin1II	CATG	6 cut(s)	134, 197, 371, 810, 838, 860
Hin6I	GCGC	1 cut(s)	614
HinP1I	GCGC	1 cut(s)	614
HincII	GTYRAC	3 cut(s)	237, 502, 816
HindII	GTYRAC	3 cut(s)	237, 502, 816
HinfI	GANTC	4 cut(s)	50, 86, 190, 608
HpaII	CCGG	2 cut(s)	116, 296
HphI	GGTGA	3 cut(s)	310, 337, 904
Hpy166II	GTNNAC	3 cut(s)	237, 502, 816
Hpy188I	TCNGA	5 cut(s)	140, 175, 553, 762, 853
Hpy188III	TCNNGA	6 cut(s)	147, 368, 626, 644, 663, 797
Hpy8I	GTNNAC	3 cut(s)	237, 502, 816
Hpy99I	CGWCG	3 cut(s)	10, 13, 241
HpyAV	CCTTC	4 cut(s)	207, 623, 803, 858
HpyCH4III	ACNGT	3 cut(s)	241, 766, 900
HpyCH4IV	ACGT	1 cut(s)	812
HpyCH4V	TGCA	7 cut(s)	78, 206, 244, 304, 779, 868, 905
HpyF3I	CTNAG	4 cut(s)	285, 444, 653, 822
HpySE526I	ACGT	1 cut(s)	812
Hsp92I	GRCGYC	1 cut(s)	812
Hsp92II	CATG	6 cut(s)	134, 197, 371, 810, 838, 860
HspAI	GCGC	1 cut(s)	614
Kzo9I	GATC	8 cut(s)	140, 178, 394, 416, 534, 622, 757, 853
LmnI	GCTCC	1 cut(s)	706
Lsp1109I	GCAGC	3 cut(s)	256, 293, 328
LweI	GCATC	3 cut(s)	291, 361, 417
MaeI	CTAG	2 cut(s)	479, 956
MaeII	ACGT	1 cut(s)	812
MaeIII	GTNAC	1 cut(s)	325
MalI	GATC	8 cut(s)	142, 180, 396, 418, 536, 624, 759, 855
MboI	GATC	8 cut(s)	140, 178, 394, 416, 534, 622, 757, 853
MboII	GAAGA	5 cut(s)	472, 612, 916, 920, 941
MflI	RGATCY	2 cut(s)	416, 757
MhlI	GDGCHC	1 cut(s)	730
MluCI	AATT	4 cut(s)	68, 80, 582, 961
MlyI	GAGTC	2 cut(s)	44, 199
MmeI	TCCRAC	1 cut(s)	785
MnlI	CCTC	2 cut(s)	651, 670
Mph1103I	ATGCAT	1 cut(s)	781
MseI	TTAA	4 cut(s)	27, 470, 495, 884
MslI	CAYNNNNRTG	1 cut(s)	402
MspA1I	CMGCKG	1 cut(s)	284
MspCI	CTTAAG	1 cut(s)	883
MspI	CCGG	2 cut(s)	116, 296
MspR9I	CCNGG	3 cut(s)	154, 183, 704
Mva1269I	GAATGC	1 cut(s)	680
MvaI	CCWGG	3 cut(s)	154, 183, 704
MvnI	CGCG	2 cut(s)	95, 103
NcoI	CCATGG	1 cut(s)	806
NdeI	CATATG	1 cut(s)	258
NdeII	GATC	8 cut(s)	140, 178, 394, 416, 534, 622, 757, 853
NlaIII	CATG	6 cut(s)	134, 197, 371, 810, 838, 860
NlaIV	GGNNCC	2 cut(s)	379, 970
NmuCI	GTSAC	1 cut(s)	325
NsiI	ATGCAT	1 cut(s)	781
NspI	RCATGY	1 cut(s)	134
NspV	TTCGAA	2 cut(s)	84, 927
PagI	TCATGA	1 cut(s)	367
PciI	ACATGT	1 cut(s)	130
PctI	GAATGC	1 cut(s)	680
PfeI	GAWTC	2 cut(s)	86, 608
PkrI	GCNGC	4 cut(s)	246, 283, 343, 575
PleI	GAGTC	2 cut(s)	44, 198
PpsI	GAGTC	2 cut(s)	44, 198
PscI	ACATGT	1 cut(s)	130
Psp6I	CCWGG	3 cut(s)	152, 181, 702
PspFI	CCCAGC	1 cut(s)	545
PspGI	CCWGG	3 cut(s)	152, 181, 702
PspN4I	GGNNCC	2 cut(s)	379, 970
PspPI	GGNCC	2 cut(s)	575, 969
PstNI	CAGNNNCTG	1 cut(s)	250
PsuI	RGATCY	2 cut(s)	416, 757
PvuII	CAGCTG	1 cut(s)	284
RseI	CAYNNNNRTG	1 cut(s)	402
SalI	GTCGAC	1 cut(s)	235
SaqAI	TTAA	4 cut(s)	27, 470, 495, 884
SatI	GCNGC	4 cut(s)	245, 282, 342, 574
Sau3AI	GATC	8 cut(s)	140, 178, 394, 416, 534, 622, 757, 853
Sau96I	GGNCC	2 cut(s)	575, 969
SchI	GAGTC	2 cut(s)	44, 199
ScrFI	CCNGG	3 cut(s)	154, 183, 704
SduI	GDGCHC	1 cut(s)	730
SfaNI	GCATC	3 cut(s)	291, 361, 417
SfuI	TTCGAA	2 cut(s)	84, 927
SmiMI	CAYNNNNRTG	1 cut(s)	402
SmlI	CTYRAG	2 cut(s)	434, 883
SmoI	CTYRAG	2 cut(s)	434, 883
SpeI	ACTAGT	1 cut(s)	955
Sse9I	AATT	4 cut(s)	68, 80, 582, 961
SsiI	CCGC	4 cut(s)	93, 266, 527, 573
SspMI	CTAG	2 cut(s)	479, 956
StyD4I	CCNGG	3 cut(s)	152, 181, 702
StyI	CCWWGG	1 cut(s)	806
TaaI	ACNGT	3 cut(s)	241, 766, 900
TaiI	ACGT	1 cut(s)	815
TaqI	TCGA	5 cut(s)	84, 188, 236, 698, 927
TaqII	GACCGA	1 cut(s)	137
TasI	AATT	4 cut(s)	68, 80, 582, 961
TauI	GCSGC	1 cut(s)	576
TfiI	GAWTC	2 cut(s)	86, 608
Tru1I	TTAA	4 cut(s)	27, 470, 495, 884
Tru9I	TTAA	4 cut(s)	27, 470, 495, 884
TscAI	CASTG	1 cut(s)	522
TseFI	GTSAC	1 cut(s)	325
TseI	GCWGC	3 cut(s)	244, 281, 341
Tsp45I	GTSAC	1 cut(s)	325
TspDTI	ATGAA	3 cut(s)	48, 356, 444
TspGWI	ACGGA	1 cut(s)	429
TspRI	CASTG	1 cut(s)	522
Vha464I	CTTAAG	1 cut(s)	883
XapI	RAATTY	3 cut(s)	68, 80, 961
XceI	RCATGY	1 cut(s)	134
XmiI	GTMKAC	1 cut(s)	236
XspI	CTAG	2 cut(s)	479, 956
ZraI	GACGTC	1 cut(s)	813
Zsp2I	ATGCAT	1 cut(s)	781

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.