MD15G1125400.v1.1

Belongs to the peroxidase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
9115520 .. 9119029
3510 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1125400.v1.1.491

Sequence Viewer

Length: 972 bp
ATGGCGCCAATTACCTCCACCGTCGCCCTCCTCTGCTCCTCAACCCCGTCCATCTTTACCCCCTCTTACTCCACCACATTCCCGTTCAACTTCAACTTTCCGGCCAAATCCCTCTCAACGGTCAATTTTCACGCCAATCCTCTTCCCGCCGTCAAAGCCGCCACTTCAGGTAAAGATCACGTCTTGGGCAGAAGAGGACTGGTGCTTACACTTACTGCCACACTGCCATGGCTGCTTCCTTTCTCTGAATGCACGGCGGCGAAGGCGGCTGAGTCGGATGGAAGTGAATATGAGCTTATGAAGGAGGAGATTAGGAAGGTGGTGACCAAGGGAAAGGCGGCCGGCGTGCTTCGTTTGGTGTTTCATGATGCCGGGACTTATCAAATTGATGACAATTCAGGTGGTATGGATGGTTCTATCGTTTATGAACTTGATAGACCGGAAAACAAAGGTCTTAAAACTCCTTTCAAGATTCTAGAGAAAGCAAAGAGTGAGGTGGAAGCAGTACACCCAGTGTCCTGGGCAGACATGATTGCTGTGGCTGGAGCAGAAGCAGTTTCAATATGTGGAGGTCCTACAATCCAAGTTCCGTTAGGCAGACTAGATTCAAAGGAGCCTGATCCCGAAGGAAAACTTCCTGAAGAAACTCTGGATGCTTCTGGTCTGAAGCAAAGCTTCCAAACAAAAGGCTTCTCAACTCAGGAACTTGTTGCTCTGTCAGGAGCCCATACTATTGGAAATAAAGGTTTCGGGAACCCAACGGTTTTTGACAATACATACTTCAAAATTCTTCTTGAGAAACCATCTTCAGGTAGCATGATTGGCCTTCCCTCAGACCGTGCACTTGCCAAGGATGATGAATGCTTAAGCTGGATCACAAAGTATGCCGCGGACCAGAATATGTTCTTCAACGATTTCAAGACGGCTTATCTCAAACTAGTGAATTCGGGAGCCAGGTGGAAGAGCTTGTGA

Protein Analysis

324

Amino Acids

34.79

Weight (kDa)

6.01

Isoelectric Point (pI)

34.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
peroxidase PF00141 102 - 298 1.6e-44 Peroxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 4
AccII CGCG 1 cut(s) 890
AciI CCGC 7 cut(s) 147, 159, 257, 266, 338, 888, 890
AclWI GGATC 2 cut(s) 614, 881
AcoI YGGCCR 2 cut(s) 102, 339
AcsI RAATTY 2 cut(s) 786, 943
AcuI CTGAAG 4 cut(s) 150, 660, 686, 792
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 1 cut(s) 514
AfaI GTAC 1 cut(s) 507
AfiI CCNNNNNNNGG 2 cut(s) 118, 809
AflII CTTAAG 1 cut(s) 865
AgsI TTSAA 8 cut(s) 88, 94, 469, 561, 609, 784, 910, 919
AhlI ACTAGT 1 cut(s) 937
AjiI CACGTC 1 cut(s) 181
AjnI CCWGG 2 cut(s) 518, 953
AluBI AGCT 4 cut(s) 295, 675, 870, 966
AluI AGCT 4 cut(s) 295, 675, 870, 966
Alw21I GWGCWC 1 cut(s) 844
Alw44I GTGCAC 1 cut(s) 840
AlwI GGATC 2 cut(s) 614, 881
AoxI GGCC 3 cut(s) 102, 339, 823
ApaLI GTGCAC 1 cut(s) 840
ApeKI GCWGC 1 cut(s) 232
ApoI RAATTY 2 cut(s) 786, 943
Asp700I GAANNNNTTC 1 cut(s) 902
AspLEI GCGC 1 cut(s) 7
AspS9I GGNCC 2 cut(s) 572, 892
AsuC2I CCSGG 1 cut(s) 373
AsuHPI GGTGA 1 cut(s) 334
AvaII GGWCC 2 cut(s) 572, 892
BaeGI GKGCMC 1 cut(s) 844
BanI GGYRCC 1 cut(s) 4
BanII GRGCYC 1 cut(s) 727
Bbv12I GWGCWC 1 cut(s) 844
BbvI GCAGC 1 cut(s) 219
BccI CCATC 4 cut(s) 59, 272, 404, 811
BceAI ACGGC 3 cut(s) 134, 270, 939
BciT130I CCWGG 2 cut(s) 520, 955
BcnI CCSGG 1 cut(s) 373
BcuI ACTAGT 1 cut(s) 937
BfaI CTAG 3 cut(s) 476, 602, 938
BfoI RGCGCY 1 cut(s) 8
BfrI CTTAAG 1 cut(s) 865
BisI GCNGC 6 cut(s) 159, 233, 258, 267, 339, 888
BlsI GCNGC 6 cut(s) 160, 234, 259, 268, 340, 889
Bme1390I CCNGG 3 cut(s) 373, 520, 955
Bme18I GGWCC 2 cut(s) 572, 892
BmgBI CACGTC 1 cut(s) 181
BmgT120I GGNCC 2 cut(s) 572, 892
BmiI GGNNCC 5 cut(s) 6, 615, 724, 755, 952
BmrFI CCNGG 3 cut(s) 373, 520, 955
BmrI ACTGGG 1 cut(s) 506
BmsI GCATC 2 cut(s) 358, 643
BmuI ACTGGG 1 cut(s) 506
BpmI CTGGAG 1 cut(s) 564
BpuEI CTTGAG 1 cut(s) 815
BpuMI CCSGG 1 cut(s) 373
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 5 cut(s) 227, 327, 519, 849, 888
BsaWI WCCGGW 1 cut(s) 439
Bsc4I CCNNNNNNNGG 2 cut(s) 118, 809
Bse118I RCCGGY 1 cut(s) 341
Bse1I ACTGG 2 cut(s) 204, 512
BseBI CCWGG 2 cut(s) 520, 955
BseDI CCNNGG 5 cut(s) 227, 327, 519, 849, 888
BseGI GGATG 4 cut(s) 283, 415, 658, 859
BseLI CCNNNNNNNGG 2 cut(s) 118, 809
BseMII CTCAG 3 cut(s) 261, 713, 846
BseNI ACTGG 2 cut(s) 204, 512
BseRI GAGGAG 3 cut(s) 20, 28, 320
BseSI GKGCMC 1 cut(s) 844
BseX3I CGGCCG 1 cut(s) 339
BseXI GCAGC 1 cut(s) 219
Bsh1236I CGCG 1 cut(s) 890
Bsh1285I CGRYCG 1 cut(s) 342
BshFI GGCC 3 cut(s) 104, 341, 825
BshNI GGYRCC 1 cut(s) 4
BsiEI CGRYCG 1 cut(s) 342
BsiHKAI GWGCWC 1 cut(s) 844
BsiSI CCGG 4 cut(s) 101, 342, 372, 440
BslFI GGGAC 1 cut(s) 388
BslI CCNNNNNNNGG 2 cut(s) 118, 809
BsmFI GGGAC 1 cut(s) 388
BsmI GAATGC 2 cut(s) 254, 866
BsnI GGCC 3 cut(s) 104, 341, 825
Bsp1286I GDGCHC 2 cut(s) 727, 844
Bsp143I GATC 3 cut(s) 175, 619, 873
Bsp19I CCATGG 1 cut(s) 227
BspACI CCGC 7 cut(s) 147, 159, 257, 266, 338, 888, 890
BspANI GGCC 3 cut(s) 104, 341, 825
BspCNI CTCAG 3 cut(s) 262, 712, 845
BspFNI CGCG 1 cut(s) 890
BspHI TCATGA 1 cut(s) 364
BspLI GGNNCC 5 cut(s) 6, 615, 724, 755, 952
BspPI GGATC 2 cut(s) 614, 881
BspQI GCTCTTC 1 cut(s) 956
BspT107I GGYRCC 1 cut(s) 4
BspTI CTTAAG 1 cut(s) 865
BsrFI RCCGGY 1 cut(s) 341
BsrI ACTGG 2 cut(s) 204, 512
BssAI RCCGGY 1 cut(s) 341
BssECI CCNNGG 5 cut(s) 227, 327, 519, 849, 888
BssMI GATC 3 cut(s) 175, 619, 873
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 3 cut(s) 227, 327, 849
Bst2UI CCWGG 2 cut(s) 520, 955
Bst4CI ACNGT 4 cut(s) 22, 121, 763, 839
Bst6I CTCTTC 3 cut(s) 147, 187, 956
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 865
BstC8I GCNNGC 2 cut(s) 343, 347
BstDEI CTNAG 3 cut(s) 270, 699, 832
BstDSI CCRYGG 2 cut(s) 227, 888
BstEII GGTNACC 1 cut(s) 322
BstF5I GGATG 4 cut(s) 283, 415, 658, 859
BstFNI CGCG 1 cut(s) 890
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 1 cut(s) 7
BstKTI GATC 3 cut(s) 178, 622, 876
BstMBI GATC 3 cut(s) 175, 619, 873
BstMCI CGRYCG 1 cut(s) 342
BstMWI GCNNNNNNNGC 5 cut(s) 155, 232, 263, 266, 822
BstNI CCWGG 2 cut(s) 520, 955
BstPI GGTNACC 1 cut(s) 322
BstSCI CCNGG 3 cut(s) 371, 518, 953
BstSLI GKGCMC 1 cut(s) 844
BstUI CGCG 1 cut(s) 890
BstV1I GCAGC 1 cut(s) 219
BstXI CCANNNNNNTGG 2 cut(s) 519, 734
BstZI CGGCCG 1 cut(s) 339
BsuRI GGCC 3 cut(s) 104, 341, 825
BtgI CCRYGG 2 cut(s) 227, 888
BtrI CACGTC 1 cut(s) 181
BtsCI GGATG 4 cut(s) 283, 415, 658, 859
BtsI GCAGTG 1 cut(s) 221
BtsIMutI CAGTG 2 cut(s) 221, 519
Cac8I GCNNGC 2 cut(s) 343, 347
CciI TCATGA 1 cut(s) 364
CfoI GCGC 1 cut(s) 7
Cfr10I RCCGGY 1 cut(s) 341
Cfr13I GGNCC 2 cut(s) 572, 892
Cfr42I CCGCGG 1 cut(s) 891
Csp6I GTAC 1 cut(s) 506
CspCI CAANNNNNGTGG 2 cut(s) 382, 417
CviAII CATG 4 cut(s) 228, 365, 529, 817
CviQI GTAC 1 cut(s) 506
DdeI CTNAG 3 cut(s) 270, 699, 832
DinI GGCGCC 1 cut(s) 6
DpnI GATC 3 cut(s) 177, 621, 875
DpnII GATC 3 cut(s) 175, 619, 873
DraIII CACNNNGTG 1 cut(s) 514
EaeI YGGCCR 2 cut(s) 102, 339
EagI CGGCCG 1 cut(s) 339
Eam1104I CTCTTC 3 cut(s) 147, 187, 956
EarI CTCTTC 3 cut(s) 147, 187, 956
EclXI CGGCCG 1 cut(s) 339
Eco130I CCWWGG 3 cut(s) 227, 327, 849
Eco24I GRGCYC 1 cut(s) 727
Eco47I GGWCC 2 cut(s) 572, 892
Eco52I CGGCCG 1 cut(s) 339
Eco57I CTGAAG 4 cut(s) 150, 660, 686, 792
Eco91I GGTNACC 1 cut(s) 322
EcoO109I RGGNCCY 1 cut(s) 572
EcoO65I GGTNACC 1 cut(s) 322
EcoRI GAATTC 1 cut(s) 943
EcoRII CCWGG 2 cut(s) 518, 953
EcoT14I CCWWGG 3 cut(s) 227, 327, 849
EcoT38I GRGCYC 1 cut(s) 727
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 3 cut(s) 227, 327, 849
FaeI CATG 4 cut(s) 231, 368, 532, 820
FalI AAGNNNNNCTT 4 cut(s) 618, 650, 659, 691
FaqI GGGAC 1 cut(s) 388
FatI CATG 4 cut(s) 227, 364, 528, 816
FauI CCCGC 1 cut(s) 154
Fnu4HI GCNGC 6 cut(s) 159, 233, 258, 267, 339, 888
FokI GGATG 4 cut(s) 290, 422, 665, 866
FriOI GRGCYC 1 cut(s) 727
Fsp4HI GCNGC 6 cut(s) 159, 233, 258, 267, 339, 888
FspBI CTAG 3 cut(s) 476, 602, 938
GlaI GCGC 1 cut(s) 6
GluI GCNGC 6 cut(s) 159, 233, 258, 267, 339, 888
GsuI CTGGAG 1 cut(s) 564
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 3 cut(s) 104, 341, 825
HapII CCGG 4 cut(s) 101, 342, 372, 440
HhaI GCGC 1 cut(s) 7
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 4 cut(s) 231, 368, 532, 820
Hin6I GCGC 1 cut(s) 5
HinP1I GCGC 1 cut(s) 5
HindIII AAGCTT 1 cut(s) 673
HinfI GANTC 3 cut(s) 272, 472, 605
HpaII CCGG 4 cut(s) 101, 342, 372, 440
HphI GGTGA 1 cut(s) 334
Hpy166II GTNNAC 2 cut(s) 508, 842
Hpy188I TCNGA 4 cut(s) 247, 277, 666, 835
Hpy8I GTNNAC 2 cut(s) 508, 842
Hpy99I CGWCG 1 cut(s) 26
HpyAV CCTTC 5 cut(s) 256, 295, 310, 620, 836
HpyCH4III ACNGT 4 cut(s) 22, 121, 763, 839
HpyCH4IV ACGT 1 cut(s) 180
HpyCH4V TGCA 2 cut(s) 252, 842
HpyF10VI GCNNNNNNNGC 5 cut(s) 155, 232, 263, 266, 822
HpyF3I CTNAG 3 cut(s) 270, 699, 832
HpySE526I ACGT 1 cut(s) 180
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 4 cut(s) 231, 368, 532, 820
HspAI GCGC 1 cut(s) 5
KasI GGCGCC 1 cut(s) 4
KroI GCCGGC 1 cut(s) 341
KroNI GCCGGC 1 cut(s) 343
KspI CCGCGG 1 cut(s) 891
Kzo9I GATC 3 cut(s) 175, 619, 873
LguI GCTCTTC 1 cut(s) 956
LmnI GCTCC 5 cut(s) 41, 545, 613, 722, 950
Lsp1109I GCAGC 1 cut(s) 219
LweI GCATC 2 cut(s) 358, 643
MaeI CTAG 3 cut(s) 476, 602, 938
MaeII ACGT 1 cut(s) 180
MaeIII GTNAC 1 cut(s) 322
MalI GATC 3 cut(s) 177, 621, 875
MboI GATC 3 cut(s) 175, 619, 873
MboII GAAGA 6 cut(s) 134, 204, 653, 782, 798, 898
MhlI GDGCHC 2 cut(s) 727, 844
MluCI AATT 6 cut(s) 9, 124, 384, 394, 786, 943
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 1 cut(s) 281
MmeI TCCRAC 1 cut(s) 255
MroNI GCCGGC 1 cut(s) 341
MroXI GAANNNNTTC 1 cut(s) 902
MseI TTAA 2 cut(s) 456, 866
MslI CAYNNNNRTG 1 cut(s) 226
MspA1I CMGCKG 1 cut(s) 890
MspCI CTTAAG 1 cut(s) 865
MspI CCGG 4 cut(s) 101, 342, 372, 440
MspR9I CCNGG 3 cut(s) 373, 520, 955
Mva1269I GAATGC 2 cut(s) 254, 866
MvaI CCWGG 2 cut(s) 520, 955
MvnI CGCG 1 cut(s) 890
MwoI GCNNNNNNNGC 5 cut(s) 155, 232, 263, 266, 822
NaeI GCCGGC 1 cut(s) 343
NarI GGCGCC 1 cut(s) 5
NciI CCSGG 1 cut(s) 373
NcoI CCATGG 1 cut(s) 227
NdeII GATC 3 cut(s) 175, 619, 873
NgoMIV GCCGGC 1 cut(s) 341
NlaIII CATG 4 cut(s) 231, 368, 532, 820
NlaIV GGNNCC 5 cut(s) 6, 615, 724, 755, 952
NmuCI GTSAC 1 cut(s) 322
PagI TCATGA 1 cut(s) 364
PciSI GCTCTTC 1 cut(s) 956
PctI GAATGC 2 cut(s) 254, 866
PdiI GCCGGC 1 cut(s) 343
PdmI GAANNNNTTC 1 cut(s) 902
PfeI GAWTC 2 cut(s) 472, 605
PkrI GCNGC 6 cut(s) 160, 234, 259, 268, 340, 889
PleI GAGTC 1 cut(s) 280
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 1 cut(s) 280
PpuMI RGGWCCY 1 cut(s) 572
Psp5II RGGWCCY 1 cut(s) 572
Psp6I CCWGG 2 cut(s) 518, 953
PspEI GGTNACC 1 cut(s) 322
PspGI CCWGG 2 cut(s) 518, 953
PspN4I GGNNCC 5 cut(s) 6, 615, 724, 755, 952
PspPI GGNCC 2 cut(s) 572, 892
PspPPI RGGWCCY 1 cut(s) 572
PsrI GAACNNNNNNTAC 2 cut(s) 397, 429
RsaI GTAC 1 cut(s) 507
RsaNI GTAC 1 cut(s) 506
RseI CAYNNNNRTG 1 cut(s) 226
SacII CCGCGG 1 cut(s) 891
SapI GCTCTTC 1 cut(s) 956
SaqAI TTAA 2 cut(s) 456, 866
SatI GCNGC 6 cut(s) 159, 233, 258, 267, 339, 888
Sau3AI GATC 3 cut(s) 175, 619, 873
Sau96I GGNCC 2 cut(s) 572, 892
SchI GAGTC 1 cut(s) 281
ScrFI CCNGG 3 cut(s) 373, 520, 955
SduI GDGCHC 2 cut(s) 727, 844
SfaNI GCATC 2 cut(s) 358, 643
SfoI GGCGCC 1 cut(s) 6
Sfr303I CCGCGG 1 cut(s) 891
SgrBI CCGCGG 1 cut(s) 891
SinI GGWCC 2 cut(s) 572, 892
SmiMI CAYNNNNRTG 1 cut(s) 226
SmlI CTYRAG 2 cut(s) 794, 865
SmoI CTYRAG 2 cut(s) 794, 865
SpeI ACTAGT 1 cut(s) 937
Sse9I AATT 6 cut(s) 9, 124, 384, 394, 786, 943
SsiI CCGC 7 cut(s) 147, 159, 257, 266, 338, 888, 890
SspDI GGCGCC 1 cut(s) 4
SspMI CTAG 3 cut(s) 476, 602, 938
StyD4I CCNGG 3 cut(s) 371, 518, 953
StyI CCWWGG 3 cut(s) 227, 327, 849
TaaI ACNGT 4 cut(s) 22, 121, 763, 839
TaiI ACGT 1 cut(s) 183
TasI AATT 6 cut(s) 9, 124, 384, 394, 786, 943
TatI WGTACW 1 cut(s) 505
TauI GCSGC 5 cut(s) 161, 260, 269, 341, 890
TfiI GAWTC 2 cut(s) 472, 605
Tru1I TTAA 2 cut(s) 456, 866
Tru9I TTAA 2 cut(s) 456, 866
TscAI CASTG 2 cut(s) 228, 519
TseFI GTSAC 1 cut(s) 322
TseI GCWGC 1 cut(s) 232
Tsp45I GTSAC 1 cut(s) 322
TspDTI ATGAA 4 cut(s) 314, 353, 441, 873
TspGWI ACGGA 1 cut(s) 579
TspRI CASTG 2 cut(s) 228, 519
Vha464I CTTAAG 1 cut(s) 865
VneI GTGCAC 1 cut(s) 840
VpaK11BI GGWCC 2 cut(s) 572, 892
XapI RAATTY 2 cut(s) 786, 943
XbaI TCTAGA 1 cut(s) 475
XmnI GAANNNNTTC 1 cut(s) 902
XspI CTAG 3 cut(s) 476, 602, 938
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.