E3 ubiquitin-protein ligase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 993 |
| AccB1I | GGYRCC | 1 cut(s) | 993 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1615 |
| AccI | GTMKAC | 2 cut(s) | 1049, 1782 |
| AccII | CGCG | 1 cut(s) | 20 |
| AciI | CCGC | 3 cut(s) | 20, 653, 1632 |
| AclWI | GGATC | 3 cut(s) | 1332, 1510, 1672 |
| AcoI | YGGCCR | 1 cut(s) | 421 |
| AcsI | RAATTY | 4 cut(s) | 1312, 1391, 1585, 1604 |
| AcuI | CTGAAG | 3 cut(s) | 704, 1156, 1644 |
| AfaI | GTAC | 4 cut(s) | 611, 995, 1475, 1627 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 659, 1615 |
| AgeI | ACCGGT | 1 cut(s) | 1197 |
| AgsI | TTSAA | 5 cut(s) | 704, 1159, 1343, 1427, 1762 |
| AjnI | CCWGG | 2 cut(s) | 391, 1580 |
| AleI | CACNNNNGTG | 1 cut(s) | 984 |
| Alw21I | GWGCWC | 2 cut(s) | 207, 1676 |
| Alw26I | GTCTC | 1 cut(s) | 806 |
| AlwI | GGATC | 3 cut(s) | 1332, 1510, 1672 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 100 |
| AoxI | GGCC | 2 cut(s) | 421, 1646 |
| ApeKI | GCWGC | 5 cut(s) | 94, 152, 578, 1330, 1562 |
| ApoI | RAATTY | 4 cut(s) | 1312, 1391, 1585, 1604 |
| AsiGI | ACCGGT | 1 cut(s) | 1197 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 144 |
| Asp718I | GGTACC | 1 cut(s) | 993 |
| AspLEI | GCGC | 1 cut(s) | 20 |
| AsuHPI | GGTGA | 6 cut(s) | 190, 407, 1055, 1174, 1271, 1524 |
| AxyI | CCTNAGG | 1 cut(s) | 1290 |
| BalI | TGGCCA | 1 cut(s) | 423 |
| BanI | GGYRCC | 1 cut(s) | 993 |
| BanII | GRGCYC | 2 cut(s) | 1383, 1676 |
| BauI | CACGAG | 1 cut(s) | 893 |
| BbsI | GAAGAC | 4 cut(s) | 307, 345, 710, 1686 |
| Bbv12I | GWGCWC | 2 cut(s) | 207, 1676 |
| BbvCI | CCTCAGC | 1 cut(s) | 678 |
| BbvI | GCAGC | 5 cut(s) | 106, 164, 565, 1342, 1574 |
| BccI | CCATC | 3 cut(s) | 59, 175, 1012 |
| BceAI | ACGGC | 1 cut(s) | 1433 |
| BciT130I | CCWGG | 2 cut(s) | 393, 1582 |
| BciVI | GTATCC | 1 cut(s) | 1108 |
| BclI | TGATCA | 2 cut(s) | 397, 952 |
| BcoDI | GTCTC | 1 cut(s) | 806 |
| BfaI | CTAG | 5 cut(s) | 149, 551, 575, 645, 1097 |
| BfuI | GTATCC | 1 cut(s) | 1108 |
| BglII | AGATCT | 1 cut(s) | 571 |
| BisI | GCNGC | 5 cut(s) | 95, 153, 579, 1331, 1563 |
| BlsI | GCNGC | 5 cut(s) | 96, 154, 580, 1332, 1564 |
| Bme1390I | CCNGG | 2 cut(s) | 393, 1582 |
| BmiI | GGNNCC | 2 cut(s) | 995, 1380 |
| BmrFI | CCNGG | 2 cut(s) | 393, 1582 |
| BmsI | GCATC | 4 cut(s) | 488, 875, 1527, 1585 |
| BpiI | GAAGAC | 4 cut(s) | 307, 345, 710, 1686 |
| BpmI | CTGGAG | 1 cut(s) | 318 |
| Bpu10I | CCTNAGC | 3 cut(s) | 173, 678, 1650 |
| BpuEI | CTTGAG | 2 cut(s) | 623, 1394 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1427 |
| BsaWI | WCCGGW | 1 cut(s) | 1197 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 239, 269, 291, 321 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 659, 1615 |
| Bse118I | RCCGGY | 1 cut(s) | 1197 |
| Bse1I | ACTGG | 3 cut(s) | 235, 827, 949 |
| Bse21I | CCTNAGG | 1 cut(s) | 1290 |
| Bse3DI | GCAATG | 1 cut(s) | 424 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1427 |
| BseBI | CCWGG | 2 cut(s) | 393, 1582 |
| BseGI | GGATG | 6 cut(s) | 10, 70, 247, 688, 890, 1518 |
| BseJI | GATNNNNATC | 1 cut(s) | 1427 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 659, 1615 |
| BseMI | GCAATG | 1 cut(s) | 424 |
| BseMII | CTCAG | 8 cut(s) | 137, 149, 362, 669, 801, 1281, 1580, 1641 |
| BseNI | ACTGG | 3 cut(s) | 235, 827, 949 |
| BseRI | GAGGAG | 3 cut(s) | 34, 1307, 1391 |
| BseXI | GCAGC | 5 cut(s) | 106, 164, 565, 1342, 1574 |
| BseYI | CCCAGC | 1 cut(s) | 1176 |
| BsgI | GTGCAG | 1 cut(s) | 485 |
| Bsh1236I | CGCG | 1 cut(s) | 20 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1198 |
| BshFI | GGCC | 2 cut(s) | 423, 1648 |
| BshNI | GGYRCC | 1 cut(s) | 993 |
| BshTI | ACCGGT | 1 cut(s) | 1197 |
| BsiEI | CGRYCG | 1 cut(s) | 1198 |
| BsiHKAI | GWGCWC | 2 cut(s) | 207, 1676 |
| BsiSI | CCGG | 1 cut(s) | 1198 |
| BslFI | GGGAC | 2 cut(s) | 834, 1695 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 659, 1615 |
| BsmAI | GTCTC | 1 cut(s) | 806 |
| BsmFI | GGGAC | 2 cut(s) | 834, 1695 |
| BsmI | GAATGC | 1 cut(s) | 670 |
| BsnI | GGCC | 2 cut(s) | 423, 1648 |
| Bsp1286I | GDGCHC | 3 cut(s) | 207, 1383, 1676 |
| BspACI | CCGC | 3 cut(s) | 20, 653, 1632 |
| BspANI | GGCC | 2 cut(s) | 423, 1648 |
| BspCNI | CTCAG | 8 cut(s) | 136, 148, 361, 670, 802, 1282, 1579, 1642 |
| BspFNI | CGCG | 1 cut(s) | 20 |
| BspLI | GGNNCC | 2 cut(s) | 995, 1380 |
| BspPI | GGATC | 3 cut(s) | 1332, 1510, 1672 |
| BspT107I | GGYRCC | 1 cut(s) | 993 |
| BsrDI | GCAATG | 1 cut(s) | 424 |
| BsrFI | RCCGGY | 1 cut(s) | 1197 |
| BsrI | ACTGG | 3 cut(s) | 235, 827, 949 |
| BssAI | RCCGGY | 1 cut(s) | 1197 |
| BssNAI | GTATAC | 1 cut(s) | 1050 |
| BssSI | CACGAG | 1 cut(s) | 893 |
| Bst1107I | GTATAC | 1 cut(s) | 1050 |
| Bst2BI | CACGAG | 1 cut(s) | 893 |
| Bst2UI | CCWGG | 2 cut(s) | 393, 1582 |
| Bst4CI | ACNGT | 5 cut(s) | 313, 419, 463, 832, 983 |
| Bst6I | CTCTTC | 6 cut(s) | 21, 75, 225, 343, 1025, 1257 |
| BstC8I | GCNNGC | 3 cut(s) | 34, 1656, 1770 |
| BstEII | GGTNACC | 1 cut(s) | 1180 |
| BstF5I | GGATG | 6 cut(s) | 10, 70, 247, 688, 890, 1518 |
| BstFNI | CGCG | 1 cut(s) | 20 |
| BstHHI | GCGC | 1 cut(s) | 20 |
| BstMAI | GTCTC | 1 cut(s) | 806 |
| BstMCI | CGRYCG | 1 cut(s) | 1198 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 674 |
| BstNI | CCWGG | 2 cut(s) | 393, 1582 |
| BstPI | GGTNACC | 1 cut(s) | 1180 |
| BstSCI | CCNGG | 2 cut(s) | 391, 1580 |
| BstUI | CGCG | 1 cut(s) | 20 |
| BstV1I | GCAGC | 5 cut(s) | 106, 164, 565, 1342, 1574 |
| BstV2I | GAAGAC | 4 cut(s) | 307, 345, 710, 1686 |
| BstX2I | RGATCY | 2 cut(s) | 571, 1502 |
| BstYI | RGATCY | 2 cut(s) | 571, 1502 |
| BstZ17I | GTATAC | 1 cut(s) | 1050 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1290 |
| BsuI | GTATCC | 1 cut(s) | 1108 |
| BsuRI | GGCC | 2 cut(s) | 423, 1648 |
| BtsCI | GGATG | 6 cut(s) | 10, 70, 247, 688, 890, 1518 |
| BtsI | GCAGTG | 1 cut(s) | 920 |
| BtsIMutI | CAGTG | 3 cut(s) | 242, 309, 920 |
| Cac8I | GCNNGC | 3 cut(s) | 34, 1656, 1770 |
| CaiI | CAGNNNCTG | 1 cut(s) | 100 |
| CfoI | GCGC | 1 cut(s) | 20 |
| Cfr10I | RCCGGY | 1 cut(s) | 1197 |
| CseI | GACGC | 1 cut(s) | 554 |
| CsiI | ACCWGGT | 1 cut(s) | 391 |
| Csp6I | GTAC | 4 cut(s) | 610, 994, 1474, 1626 |
| CspAI | ACCGGT | 1 cut(s) | 1197 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 740, 775 |
| CviAII | CATG | 5 cut(s) | 209, 379, 403, 502, 1124 |
| CviQI | GTAC | 4 cut(s) | 610, 994, 1474, 1626 |
| DraI | TTTAAA | 2 cut(s) | 1041, 1273 |
| EaeI | YGGCCR | 1 cut(s) | 421 |
| Eam1104I | CTCTTC | 6 cut(s) | 21, 75, 225, 343, 1025, 1257 |
| EarI | CTCTTC | 6 cut(s) | 21, 75, 225, 343, 1025, 1257 |
| Ecl136II | GAGCTC | 1 cut(s) | 1674 |
| Eco147I | AGGCCT | 1 cut(s) | 1648 |
| Eco24I | GRGCYC | 2 cut(s) | 1383, 1676 |
| Eco53kI | GAGCTC | 1 cut(s) | 1674 |
| Eco57I | CTGAAG | 3 cut(s) | 704, 1156, 1644 |
| Eco81I | CCTNAGG | 1 cut(s) | 1290 |
| Eco91I | GGTNACC | 1 cut(s) | 1180 |
| EcoICRI | GAGCTC | 1 cut(s) | 1674 |
| EcoO65I | GGTNACC | 1 cut(s) | 1180 |
| EcoRI | GAATTC | 1 cut(s) | 1585 |
| EcoRII | CCWGG | 2 cut(s) | 391, 1580 |
| EcoT22I | ATGCAT | 1 cut(s) | 503 |
| EcoT38I | GRGCYC | 2 cut(s) | 1383, 1676 |
| FaeI | CATG | 5 cut(s) | 212, 382, 406, 505, 1127 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1092, 1124 |
| FaqI | GGGAC | 2 cut(s) | 834, 1695 |
| FatI | CATG | 5 cut(s) | 208, 378, 402, 501, 1123 |
| FbaI | TGATCA | 2 cut(s) | 397, 952 |
| FblI | GTMKAC | 2 cut(s) | 1049, 1782 |
| Fnu4HI | GCNGC | 5 cut(s) | 95, 153, 579, 1331, 1563 |
| FokI | GGATG | 6 cut(s) | 17, 77, 254, 695, 897, 1505 |
| FriOI | GRGCYC | 2 cut(s) | 1383, 1676 |
| Fsp4HI | GCNGC | 5 cut(s) | 95, 153, 579, 1331, 1563 |
| FspBI | CTAG | 5 cut(s) | 149, 551, 575, 645, 1097 |
| GlaI | GCGC | 1 cut(s) | 19 |
| GluI | GCNGC | 5 cut(s) | 95, 153, 579, 1331, 1563 |
| GsaI | CCCAGC | 1 cut(s) | 1180 |
| GsuI | CTGGAG | 1 cut(s) | 318 |
| HaeIII | GGCC | 2 cut(s) | 423, 1648 |
| HapII | CCGG | 1 cut(s) | 1198 |
| HgaI | GACGC | 1 cut(s) | 554 |
| HhaI | GCGC | 1 cut(s) | 20 |
| Hin1II | CATG | 5 cut(s) | 212, 382, 406, 505, 1127 |
| Hin6I | GCGC | 1 cut(s) | 18 |
| HinP1I | GCGC | 1 cut(s) | 18 |
| HincII | GTYRAC | 1 cut(s) | 1783 |
| HindII | GTYRAC | 1 cut(s) | 1783 |
| HindIII | AAGCTT | 2 cut(s) | 1160, 1656 |
| HpaII | CCGG | 1 cut(s) | 1198 |
| HphI | GGTGA | 6 cut(s) | 190, 407, 1055, 1174, 1271, 1524 |
| Hpy166II | GTNNAC | 3 cut(s) | 835, 1050, 1783 |
| Hpy188I | TCNGA | 8 cut(s) | 49, 88, 483, 811, 1144, 1208, 1502, 1678 |
| Hpy188III | TCNNGA | 9 cut(s) | 53, 137, 297, 544, 569, 602, 800, 895, 1662 |
| Hpy8I | GTNNAC | 3 cut(s) | 835, 1050, 1783 |
| Hpy99I | CGWCG | 2 cut(s) | 1454, 1784 |
| HpyAV | CCTTC | 4 cut(s) | 470, 608, 1540, 1715 |
| HpyCH4III | ACNGT | 5 cut(s) | 313, 419, 463, 832, 983 |
| HpyCH4IV | ACGT | 1 cut(s) | 1708 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 674 |
| HpySE526I | ACGT | 1 cut(s) | 1708 |
| Hsp92II | CATG | 5 cut(s) | 212, 382, 406, 505, 1127 |
| HspAI | GCGC | 1 cut(s) | 18 |
| KpnI | GGTACC | 1 cut(s) | 997 |
| Ksp22I | TGATCA | 2 cut(s) | 397, 952 |
| LmnI | GCTCC | 6 cut(s) | 202, 299, 451, 938, 1378, 1671 |
| Lsp1109I | GCAGC | 5 cut(s) | 106, 164, 565, 1342, 1574 |
| LweI | GCATC | 4 cut(s) | 488, 875, 1527, 1585 |
| MabI | ACCWGGT | 1 cut(s) | 391 |
| MaeI | CTAG | 5 cut(s) | 149, 551, 575, 645, 1097 |
| MaeII | ACGT | 1 cut(s) | 1708 |
| MaeIII | GTNAC | 7 cut(s) | 307, 593, 857, 977, 1180, 1636, 1744 |
| MflI | RGATCY | 2 cut(s) | 571, 1502 |
| MhlI | GDGCHC | 3 cut(s) | 207, 1383, 1676 |
| MlsI | TGGCCA | 1 cut(s) | 423 |
| MluCI | AATT | 9 cut(s) | 69, 89, 185, 439, 1312, 1391, 1435, 1585, 1604 |
| MluNI | TGGCCA | 1 cut(s) | 423 |
| MlyI | GAGTC | 6 cut(s) | 92, 211, 556, 614, 815, 1185 |
| MmeI | TCCRAC | 3 cut(s) | 425, 1534, 1633 |
| Mox20I | TGGCCA | 1 cut(s) | 423 |
| Mph1103I | ATGCAT | 1 cut(s) | 503 |
| MroXI | GAANNNNTTC | 1 cut(s) | 144 |
| MscI | TGGCCA | 1 cut(s) | 423 |
| MseI | TTAA | 4 cut(s) | 1040, 1164, 1272, 1733 |
| MslI | CAYNNNNRTG | 1 cut(s) | 984 |
| Msp20I | TGGCCA | 1 cut(s) | 423 |
| MspA1I | CMGCKG | 2 cut(s) | 1176, 1772 |
| MspI | CCGG | 1 cut(s) | 1198 |
| MspR9I | CCNGG | 2 cut(s) | 393, 1582 |
| Mva1269I | GAATGC | 1 cut(s) | 670 |
| MvaI | CCWGG | 2 cut(s) | 393, 1582 |
| MvnI | CGCG | 1 cut(s) | 20 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 674 |
| NlaIII | CATG | 5 cut(s) | 212, 382, 406, 505, 1127 |
| NlaIV | GGNNCC | 2 cut(s) | 995, 1380 |
| NmuCI | GTSAC | 5 cut(s) | 307, 977, 1180, 1636, 1744 |
| NsiI | ATGCAT | 1 cut(s) | 503 |
| OliI | CACNNNNGTG | 1 cut(s) | 984 |
| PceI | AGGCCT | 1 cut(s) | 1648 |
| PctI | GAATGC | 1 cut(s) | 670 |
| PdmI | GAANNNNTTC | 1 cut(s) | 144 |
| PfeI | GAWTC | 5 cut(s) | 56, 140, 1085, 1423, 1551 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1615 |
| PfoI | TCCNGGA | 1 cut(s) | 1580 |
| PinAI | ACCGGT | 1 cut(s) | 1197 |
| PkrI | GCNGC | 5 cut(s) | 96, 154, 580, 1332, 1564 |
| PleI | GAGTC | 6 cut(s) | 91, 211, 555, 613, 814, 1185 |
| PpsI | GAGTC | 6 cut(s) | 91, 211, 555, 613, 814, 1185 |
| Psp124BI | GAGCTC | 1 cut(s) | 1676 |
| Psp6I | CCWGG | 2 cut(s) | 391, 1580 |
| PspEI | GGTNACC | 1 cut(s) | 1180 |
| PspFI | CCCAGC | 1 cut(s) | 1176 |
| PspGI | CCWGG | 2 cut(s) | 391, 1580 |
| PspN4I | GGNNCC | 2 cut(s) | 995, 1380 |
| PstNI | CAGNNNCTG | 1 cut(s) | 100 |
| PsuI | RGATCY | 2 cut(s) | 571, 1502 |
| PvuII | CAGCTG | 2 cut(s) | 1176, 1772 |
| RsaI | GTAC | 4 cut(s) | 611, 995, 1475, 1627 |
| RsaNI | GTAC | 4 cut(s) | 610, 994, 1474, 1626 |
| RseI | CAYNNNNRTG | 1 cut(s) | 984 |
| SacI | GAGCTC | 1 cut(s) | 1676 |
| SalI | GTCGAC | 1 cut(s) | 1781 |
| SaqAI | TTAA | 4 cut(s) | 1040, 1164, 1272, 1733 |
| SatI | GCNGC | 5 cut(s) | 95, 153, 579, 1331, 1563 |
| SchI | GAGTC | 6 cut(s) | 92, 211, 556, 614, 815, 1185 |
| ScrFI | CCNGG | 2 cut(s) | 393, 1582 |
| SduI | GDGCHC | 3 cut(s) | 207, 1383, 1676 |
| SexAI | ACCWGGT | 1 cut(s) | 391 |
| SfaNI | GCATC | 4 cut(s) | 488, 875, 1527, 1585 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 984 |
| SmlI | CTYRAG | 2 cut(s) | 602, 1373 |
| SmoI | CTYRAG | 2 cut(s) | 602, 1373 |
| Sse9I | AATT | 9 cut(s) | 69, 89, 185, 439, 1312, 1391, 1435, 1585, 1604 |
| SseBI | AGGCCT | 1 cut(s) | 1648 |
| SsiI | CCGC | 3 cut(s) | 20, 653, 1632 |
| SspMI | CTAG | 5 cut(s) | 149, 551, 575, 645, 1097 |
| SstI | GAGCTC | 1 cut(s) | 1676 |
| StuI | AGGCCT | 1 cut(s) | 1648 |
| StyD4I | CCNGG | 2 cut(s) | 391, 1580 |
| TaaI | ACNGT | 5 cut(s) | 313, 419, 463, 832, 983 |
| TaiI | ACGT | 1 cut(s) | 1711 |
| TasI | AATT | 9 cut(s) | 69, 89, 185, 439, 1312, 1391, 1435, 1585, 1604 |
| TfiI | GAWTC | 5 cut(s) | 56, 140, 1085, 1423, 1551 |
| Tru1I | TTAA | 4 cut(s) | 1040, 1164, 1272, 1733 |
| Tru9I | TTAA | 4 cut(s) | 1040, 1164, 1272, 1733 |
| TscAI | CASTG | 3 cut(s) | 242, 316, 920 |
| TseFI | GTSAC | 5 cut(s) | 307, 977, 1180, 1636, 1744 |
| TseI | GCWGC | 5 cut(s) | 94, 152, 578, 1330, 1562 |
| Tsp45I | GTSAC | 5 cut(s) | 307, 977, 1180, 1636, 1744 |
| TspDTI | ATGAA | 7 cut(s) | 93, 218, 489, 546, 1077, 1215, 1404 |
| TspGWI | ACGGA | 2 cut(s) | 229, 464 |
| TspRI | CASTG | 3 cut(s) | 242, 316, 920 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1615 |
| XapI | RAATTY | 4 cut(s) | 1312, 1391, 1585, 1604 |
| XmiI | GTMKAC | 2 cut(s) | 1049, 1782 |
| XmnI | GAANNNNTTC | 1 cut(s) | 144 |
| XspI | CTAG | 5 cut(s) | 149, 551, 575, 645, 1097 |
| Zsp2I | ATGCAT | 1 cut(s) | 503 |