Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0001183

Physical Location & Seq

Genomic Coordinates Reverse (-)

12364061 .. 12368854

Gene Structure 4794 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG107800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGGAGGACGATTGCCTGGGCAGCGATGAGGAGTTCTATACCTCCGATCAGGAAGACGATTACTCTATCGAAGGCCTCGAGGAGTCCATCGATGGCCTTGAAAACGATGACTCTGATACTCCTTGGATTCCCCCTAAGGGCACCACAACTAAGGTGATTACTAAAGAATCTCTTTTGGTGGCACAGAAGGAGGATTTGCGTAGAGTGATGGACTTGCTATTTCTGAGGGAGCACCATGCCCGAACTTTACTCATCCATCACCGGTGGGATGTTGAGAAGCTTTTTGCAGTGCTTGTAGAGAAGGGAAGAGCTTTCTTGTTTGCAGAAGCAGGTGTATCCGTAGTTGAACATCAAGATAGTGAACCACTGCTGCCTTCTTCCACAATAATGTGTGCTATTTGTATAGAGGATGTACCTAGTAATGAGGCAACTAAAATGGACTGTGGACATTGCTTTTGCAACGGCTGTTGGACGGAGCATTTTGTTGTGAAGATAAATGATGGGCAAAGTAAGCGCATTAGGTGCATGGCTCACAAATGTAATGCCATTTGTGATGAAGCCGTTGTTAGAAATCTAGTTAGCAAGAGCCACCCCAATCTTGCAGAGAAATTTGATCGGTTTCTTCTAGAGTCATACATTGAGGATAATAAAAGGGTTAAGTGGTGCCCAAGCACTCCTCATTGTGGAAATGCAATACGAGTGGAGGATGATGAATTTTGTGAGATTGAATGTTCTTGCGGTCTTCAGTTTTGTTTCCGTTGTTCATCACAAGCCCACTCACCTTGTTCATGTTTGATGTGGGAGCTTTGGGCCAAGAAATGCAGAGATGAATCTGAGACAGTTAATTGGATCACAGTCCATACTAAACCTTGTCCTAAGTGTCACAAACCTGTAGAGAAGAATGGTGGTTGCAACCTTGTGAGTTGTATCTGTGGGCAAGCATTTTGTTGGCTTTGTGGTGGAGCTACCGGCCGAGACCATACATGGTCAAGTATTGCAGGTCATAGCTGTGGGCGATACAAAGAAGACAAAGAGAAAAATGCTGAGCGGGCAAAGCGAGATCTTTATCGGTATATGCACTATCACAACCGTTATAAAGCTCATACTGATTCAATCAAGCTTGAAAGTAAGTTAAAGGAGACTATACAAGAGAAGGTATCAATTTCAGAATTGAGGGAATCGAAGAACAGAGATTTCAGCTGGGTAACGAATGGACTCTCCAGACTTTTTAGGTCAAGGCGGGTTCTTTCATATTCATATCCTTTTGCATTTTATATGTTTGGTGAGGAGCTGTTTAAGGATCAGATGACAAAGGAGGAAAGGGAAATAAAACAAAATTTGTTTGAGGACCAGCAGCAGCAGCTTGAGGAAAATGTTGAAAAACTATCCAAGTTTTTGGAGGAGCCATTTGATAATTATGACGAGGATAAAGTTATGGAAGTAAGGATGCAAGTGATCAATCTCTCAGTAGTCACAGATAAACTCTGTCAGAAAATGTATGATTGTATTGAGAATGATTTATTGGGTTCTGTGCAACTGGGTATCCACCACAATATAGCTCCTTACAGGTCAAAGGGCATAGAGAAGGCATCAGAACTCCATTGTGGAACAAATGGCGTGCAGACCAGCAATGTTCCATTTCTTCCAAGTTCAGATGAAAAAGAATTTCTTAATGCATTTGATCATGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR

Protein Analysis

563

Amino Acids

64.85

Weight (kDa)

5.39

Isoelectric Point (pI)

54.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_ARI1	PF21235	62 - 95	3e-07	E3 ubiquitin-protein ligase ARIH1, UBA-like domain
IBR	PF01485	202 - 264	7.1e-14	IBR domain, a half RING-finger domain
IBR_2	PF22605	284 - 326	1.9e-07	IBR domain
IBR_1	PF22191	287 - 321	4.6e-06	IBR domain
Rcat_RNF216	PF26200	288 - 357	1.6e-06	RNF216 Rcat domain
Ariadne	PF19422	356 - 546	1.2e-113	Ariadne domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001183)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16090 AT2G16090 AT2G16090 AT2G16090 AT2G16090 AT4G34370
fragaria_vesca	FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g40440 FvH4_2g40440
malus_domestica	MD00G1039300.v1.1 MD05G1071700.v1.1 MD08G1037700.v1.1 MD10G1083500.v1.1
prunus_persica	Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.8G106500_v2.0.a1 Prupe.8G106500_v2.0.a1 Prupe.8G106500_v2.0.a1
pyrus_communis	pycom05g06180 pycom08g03000 pycom10g06560 pycom15g02930
rosa_chinensis	RchiOBHm_Chr6g0262251 RchiOBHm_Chr6g0300291
rosa_laevigata	RLG00000011350 RLG00000014443
rosa_multiflora	Rmu_sc0001670.1_g000025 Rmu_sc0002510.1_g000028
rosa_roxburghii	Rroxscaffold_7G00167920 Rroxscaffold_7G00207940
rosa_rugosa	Rorug05G0595800 Rorug05G0595800 Rorug05G0595900 Rorug05G0595900
rosa_samantha	Rh6AG116000 Rh6AG407300 Rh6BG110300 Rh6BG414900 Rh6CG107800 Rh6CG422200 Rh6DG098200 Rh6DG407900
rosa_wichuraiana	Rw0G017080 Rw6G010090 Rw6G035620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1095
AarI	CACCTGC	1 cut(s)	320
AbsI	CCTCGAGG	1 cut(s)	77
Acc36I	ACCTGC	2 cut(s)	320, 989
AccB1I	GGYRCC	2 cut(s)	140, 663
AccBSI	CCGCTC	1 cut(s)	1048
AciI	CCGC	3 cut(s)	738, 1048, 1240
AclWI	GGATC	2 cut(s)	857, 1308
AcoI	YGGCCR	1 cut(s)	970
AcsI	RAATTY	4 cut(s)	608, 713, 1336, 1664
AcuI	CTGAAG	1 cut(s)	728
AfaI	GTAC	1 cut(s)	414
AfiI	CCNNNNNNNGG	2 cut(s)	137, 683
AgeI	ACCGGT	1 cut(s)	261
AgsI	TTSAA	6 cut(s)	101, 347, 728, 1113, 1124, 1379
AjnI	CCWGG	1 cut(s)	15
AjuI	GAANNNNNNNTTGG	2 cut(s)	1505, 1537
Alw21I	GWGCWC	1 cut(s)	234
Alw26I	GTCTC	3 cut(s)	830, 969, 1133
AlwI	GGATC	2 cut(s)	857, 1308
Ama87I	CYCGRG	1 cut(s)	77
AoxI	GGCC	4 cut(s)	73, 94, 810, 970
ApeKI	GCWGC	5 cut(s)	21, 370, 1354, 1357, 1360
ApoI	RAATTY	4 cut(s)	608, 713, 1336, 1664
ArsI	GACNNNNNNTTYG	2 cut(s)	438, 470
AsiGI	ACCGGT	1 cut(s)	261
AspLEI	GCGC	1 cut(s)	516
AspS9I	GGNCC	2 cut(s)	810, 1348
AsuHPI	GGTGA	4 cut(s)	166, 251, 771, 1295
AvaI	CYCGRG	1 cut(s)	77
AvaII	GGWCC	1 cut(s)	1348
AxyI	CCTNAGG	1 cut(s)	135
BaeGI	GKGCMC	2 cut(s)	143, 668
BanI	GGYRCC	2 cut(s)	140, 663
BbsI	GAAGAC	3 cut(s)	60, 734, 1032
Bbv12I	GWGCWC	1 cut(s)	234
BbvI	GCAGC	5 cut(s)	33, 357, 1366, 1369, 1372
BccI	CCATC	5 cut(s)	86, 95, 202, 264, 494
BceAI	ACGGC	2 cut(s)	478, 545
BciT130I	CCWGG	1 cut(s)	17
BciVI	GTATCC	2 cut(s)	346, 1553
BclI	TGATCA	2 cut(s)	1455, 1681
BcoDI	GTCTC	3 cut(s)	830, 969, 1133
BfaI	CTAG	3 cut(s)	417, 575, 626
BfmI	CTRYAG	1 cut(s)	891
BfuAI	ACCTGC	2 cut(s)	320, 989
BfuI	GTATCC	2 cut(s)	346, 1553
BglII	AGATCT	1 cut(s)	1060
BisI	GCNGC	5 cut(s)	22, 371, 1355, 1358, 1361
BlpI	GCTNAGC	1 cut(s)	1044
BlsI	GCNGC	5 cut(s)	23, 372, 1356, 1359, 1362
Bme1390I	CCNGG	1 cut(s)	17
Bme18I	GGWCC	1 cut(s)	1348
BmeT110I	CYCGRG	1 cut(s)	77
BmgT120I	GGNCC	2 cut(s)	810, 1348
BmiI	GGNNCC	3 cut(s)	142, 665, 1404
BmrFI	CCNGG	1 cut(s)	17
BmrI	ACTGGG	1 cut(s)	1547
BmsI	GCATC	2 cut(s)	1437, 1598
BmuI	ACTGGG	1 cut(s)	1547
BpiI	GAAGAC	3 cut(s)	60, 734, 1032
BpmI	CTGGAG	1 cut(s)	1204
Bpu1102I	GCTNAGC	1 cut(s)	1044
BpuEI	CTTGAG	1 cut(s)	1385
Bsa29I	ATCGAT	1 cut(s)	90
BsaBI	GATNNNNATC	1 cut(s)	1065
BsaI	GGTCTC	1 cut(s)	969
BsaJI	CCNNGG	2 cut(s)	16, 122
BsaWI	WCCGGW	1 cut(s)	261
Bsc4I	CCNNNNNNNGG	2 cut(s)	137, 683
Bse118I	RCCGGY	2 cut(s)	261, 968
Bse1I	ACTGG	1 cut(s)	1542
Bse21I	CCTNAGG	1 cut(s)	135
Bse3DI	GCAATG	2 cut(s)	448, 1636
Bse8I	GATNNNNATC	1 cut(s)	1065
BseBI	CCWGG	1 cut(s)	17
BseCI	ATCGAT	1 cut(s)	90
BseDI	CCNNGG	2 cut(s)	16, 122
BseGI	GGATG	5 cut(s)	252, 274, 415, 712, 1452
BseJI	GATNNNNATC	1 cut(s)	1065
BseLI	CCNNNNNNNGG	2 cut(s)	137, 683
BseMI	GCAATG	2 cut(s)	448, 1636
BseMII	CTCAG	4 cut(s)	215, 825, 1035, 1479
BseNI	ACTGG	1 cut(s)	1542
BseRI	GAGGAG	5 cut(s)	44, 95, 666, 1301, 1415
BseSI	GKGCMC	2 cut(s)	143, 668
BseX3I	CGGCCG	1 cut(s)	970
BseXI	GCAGC	5 cut(s)	33, 357, 1366, 1369, 1372
BseYI	CCCAGC	1 cut(s)	1200
BsgI	GTGCAG	1 cut(s)	1640
Bsh1285I	CGRYCG	1 cut(s)	973
BshFI	GGCC	4 cut(s)	75, 96, 812, 972
BshNI	GGYRCC	2 cut(s)	140, 663
BshTI	ACCGGT	1 cut(s)	261
BshVI	ATCGAT	1 cut(s)	90
BsiEI	CGRYCG	1 cut(s)	973
BsiHKAI	GWGCWC	1 cut(s)	234
BsiHKCI	CYCGRG	1 cut(s)	77
BsiSI	CCGG	2 cut(s)	262, 969
BslI	CCNNNNNNNGG	2 cut(s)	137, 683
BsmAI	GTCTC	3 cut(s)	830, 969, 1133
BsnI	GGCC	4 cut(s)	75, 96, 812, 972
Bso31I	GGTCTC	1 cut(s)	969
BsoBI	CYCGRG	1 cut(s)	77
Bsp1286I	GDGCHC	3 cut(s)	143, 234, 668
Bsp143I	GATC	7 cut(s)	46, 613, 849, 1060, 1300, 1455, 1681
Bsp1720I	GCTNAGC	1 cut(s)	1044
BspACI	CCGC	3 cut(s)	738, 1048, 1240
BspANI	GGCC	4 cut(s)	75, 96, 812, 972
BspCNI	CTCAG	4 cut(s)	216, 826, 1036, 1478
BspDI	ATCGAT	1 cut(s)	90
BspLI	GGNNCC	3 cut(s)	142, 665, 1404
BspMI	ACCTGC	2 cut(s)	320, 989
BspPI	GGATC	2 cut(s)	857, 1308
BspQI	GCTCTTC	1 cut(s)	301
BspT107I	GGYRCC	2 cut(s)	140, 663
BspTNI	GGTCTC	1 cut(s)	969
BsrBI	CCGCTC	1 cut(s)	1048
BsrDI	GCAATG	2 cut(s)	448, 1636
BsrFI	RCCGGY	2 cut(s)	261, 968
BsrI	ACTGG	1 cut(s)	1542
BssAI	RCCGGY	2 cut(s)	261, 968
BssECI	CCNNGG	2 cut(s)	16, 122
BssMI	GATC	7 cut(s)	46, 613, 849, 1060, 1300, 1455, 1681
BssT1I	CCWWGG	1 cut(s)	122
Bst2UI	CCWGG	1 cut(s)	17
Bst4CI	ACNGT	4 cut(s)	443, 841, 856, 1091
Bst6I	CTCTTC	1 cut(s)	301
BstAPI	GCANNNNNTGC	1 cut(s)	522
BstC8I	GCNNGC	3 cut(s)	939, 1050, 1619
BstDEI	CTNAG	7 cut(s)	135, 150, 224, 834, 876, 1044, 1465
BstF5I	GGATG	5 cut(s)	252, 274, 415, 712, 1452
BstHHI	GCGC	1 cut(s)	516
BstKTI	GATC	7 cut(s)	49, 616, 852, 1063, 1303, 1458, 1684
BstMAI	GTCTC	3 cut(s)	830, 969, 1133
BstMBI	GATC	7 cut(s)	46, 613, 849, 1060, 1300, 1455, 1681
BstMCI	CGRYCG	1 cut(s)	973
BstMWI	GCNNNNNNNGC	6 cut(s)	21, 511, 522, 1049, 1054, 1360
BstNI	CCWGG	1 cut(s)	17
BstSCI	CCNGG	1 cut(s)	15
BstSFI	CTRYAG	1 cut(s)	891
BstSLI	GKGCMC	2 cut(s)	143, 668
BstV1I	GCAGC	5 cut(s)	33, 357, 1366, 1369, 1372
BstV2I	GAAGAC	3 cut(s)	60, 734, 1032
BstX2I	RGATCY	1 cut(s)	1060
BstXI	CCANNNNNNTGG	1 cut(s)	1396
BstYI	RGATCY	1 cut(s)	1060
BstZI	CGGCCG	1 cut(s)	970
Bsu15I	ATCGAT	1 cut(s)	90
Bsu36I	CCTNAGG	1 cut(s)	135
BsuI	GTATCC	2 cut(s)	346, 1553
BsuRI	GGCC	4 cut(s)	75, 96, 812, 972
BsuTUI	ATCGAT	1 cut(s)	90
BtgZI	GCGATG	1 cut(s)	39
BtsCI	GGATG	5 cut(s)	252, 274, 415, 712, 1452
BtsI	GCAGTG	2 cut(s)	294, 365
BtsIMutI	CAGTG	2 cut(s)	294, 365
BveI	ACCTGC	2 cut(s)	320, 989
Cac8I	GCNNGC	3 cut(s)	939, 1050, 1619
CfoI	GCGC	1 cut(s)	516
Cfr10I	RCCGGY	2 cut(s)	261, 968
Cfr13I	GGNCC	2 cut(s)	810, 1348
ClaI	ATCGAT	1 cut(s)	90
Csp6I	GTAC	1 cut(s)	413
CspAI	ACCGGT	1 cut(s)	261
CspCI	CAANNNNNGTGG	4 cut(s)	681, 716, 764, 799
CviAII	CATG	5 cut(s)	236, 526, 789, 984, 1685
CviQI	GTAC	1 cut(s)	413
DdeI	CTNAG	7 cut(s)	135, 150, 224, 834, 876, 1044, 1465
DpnI	GATC	7 cut(s)	48, 615, 851, 1062, 1302, 1457, 1683
DpnII	GATC	7 cut(s)	46, 613, 849, 1060, 1300, 1455, 1681
EaeI	YGGCCR	1 cut(s)	970
EagI	CGGCCG	1 cut(s)	970
Eam1104I	CTCTTC	1 cut(s)	301
EarI	CTCTTC	1 cut(s)	301
EclXI	CGGCCG	1 cut(s)	970
Eco130I	CCWWGG	1 cut(s)	122
Eco147I	AGGCCT	1 cut(s)	75
Eco31I	GGTCTC	1 cut(s)	969
Eco47I	GGWCC	1 cut(s)	1348
Eco52I	CGGCCG	1 cut(s)	970
Eco57I	CTGAAG	1 cut(s)	728
Eco81I	CCTNAGG	1 cut(s)	135
Eco88I	CYCGRG	1 cut(s)	77
EcoRII	CCWGG	1 cut(s)	15
EcoT14I	CCWWGG	1 cut(s)	122
EcoT22I	ATGCAT	2 cut(s)	1678, 1690
ErhI	CCWWGG	1 cut(s)	122
FaeI	CATG	5 cut(s)	239, 529, 792, 987, 1688
FalI	AAGNNNNNCTT	4 cut(s)	156, 188, 1653, 1685
FatI	CATG	5 cut(s)	235, 525, 788, 983, 1684
FauI	CCCGC	2 cut(s)	1041, 1233
FbaI	TGATCA	2 cut(s)	1455, 1681
Fnu4HI	GCNGC	5 cut(s)	22, 371, 1355, 1358, 1361
FokI	GGATG	5 cut(s)	239, 281, 422, 719, 1459
Fsp4HI	GCNGC	5 cut(s)	22, 371, 1355, 1358, 1361
FspBI	CTAG	3 cut(s)	417, 575, 626
GlaI	GCGC	1 cut(s)	515
GluI	GCNGC	5 cut(s)	22, 371, 1355, 1358, 1361
GsaI	CCCAGC	1 cut(s)	1204
GsuI	CTGGAG	1 cut(s)	1204
HaeIII	GGCC	4 cut(s)	75, 96, 812, 972
HapII	CCGG	2 cut(s)	262, 969
HhaI	GCGC	1 cut(s)	516
Hin1II	CATG	5 cut(s)	239, 529, 792, 987, 1688
Hin6I	GCGC	1 cut(s)	514
HinP1I	GCGC	1 cut(s)	514
HindIII	AAGCTT	2 cut(s)	278, 1118
HinfI	GANTC	9 cut(s)	83, 110, 127, 167, 629, 830, 1109, 1178, 1215
HpaII	CCGG	2 cut(s)	262, 969
HphI	GGTGA	4 cut(s)	166, 251, 771, 1295
Hpy166II	GTNNAC	2 cut(s)	362, 446
Hpy188I	TCNGA	9 cut(s)	46, 115, 225, 835, 1168, 1305, 1491, 1594, 1654
Hpy188III	TCNNGA	4 cut(s)	50, 353, 626, 1221
Hpy8I	GTNNAC	2 cut(s)	362, 446
HpyAV	CCTTC	6 cut(s)	65, 181, 295, 384, 1147, 1579
HpyCH4III	ACNGT	4 cut(s)	443, 841, 856, 1091
HpyF10VI	GCNNNNNNNGC	6 cut(s)	21, 511, 522, 1049, 1054, 1360
HpyF3I	CTNAG	7 cut(s)	135, 150, 224, 834, 876, 1044, 1465
Hsp92II	CATG	5 cut(s)	239, 529, 792, 987, 1688
HspAI	GCGC	1 cut(s)	514
Ksp22I	TGATCA	2 cut(s)	1455, 1681
Kzo9I	GATC	7 cut(s)	46, 613, 849, 1060, 1300, 1455, 1681
LguI	GCTCTTC	1 cut(s)	301
LmnI	GCTCC	7 cut(s)	229, 475, 802, 962, 1288, 1402, 1564
Lsp1109I	GCAGC	5 cut(s)	33, 357, 1366, 1369, 1372
LweI	GCATC	2 cut(s)	1437, 1598
MaeI	CTAG	3 cut(s)	417, 575, 626
MaeIII	GTNAC	3 cut(s)	881, 1204, 1471
MalI	GATC	7 cut(s)	48, 615, 851, 1062, 1302, 1457, 1683
MbiI	CCGCTC	1 cut(s)	1048
MboI	GATC	7 cut(s)	46, 613, 849, 1060, 1300, 1455, 1681
MflI	RGATCY	1 cut(s)	1060
MhlI	GDGCHC	3 cut(s)	143, 234, 668
MluCI	AATT	8 cut(s)	608, 713, 844, 1161, 1169, 1336, 1414, 1664
MlyI	GAGTC	4 cut(s)	92, 104, 638, 1209
MmeI	TCCRAC	1 cut(s)	449
Mph1103I	ATGCAT	2 cut(s)	1678, 1690
MseI	TTAA	5 cut(s)	657, 843, 1133, 1296, 1671
MslI	CAYNNNNRTG	2 cut(s)	386, 1008
MspA1I	CMGCKG	1 cut(s)	1200
MspI	CCGG	2 cut(s)	262, 969
MspR9I	CCNGG	1 cut(s)	17
MvaI	CCWGG	1 cut(s)	17
MwoI	GCNNNNNNNGC	6 cut(s)	21, 511, 522, 1049, 1054, 1360
NdeII	GATC	7 cut(s)	46, 613, 849, 1060, 1300, 1455, 1681
NlaIII	CATG	5 cut(s)	239, 529, 792, 987, 1688
NlaIV	GGNNCC	3 cut(s)	142, 665, 1404
NmeAIII	GCCGAG	1 cut(s)	998
NmuCI	GTSAC	2 cut(s)	881, 1471
NsiI	ATGCAT	2 cut(s)	1678, 1690
PaeR7I	CTCGAG	1 cut(s)	77
PaqCI	CACCTGC	1 cut(s)	320
PceI	AGGCCT	1 cut(s)	75
PciSI	GCTCTTC	1 cut(s)	301
PcsI	WCGNNNNNNNCGW	1 cut(s)	75
PfeI	GAWTC	5 cut(s)	127, 167, 830, 1109, 1178
PinAI	ACCGGT	1 cut(s)	261
PkrI	GCNGC	5 cut(s)	23, 372, 1356, 1359, 1362
PleI	GAGTC	4 cut(s)	91, 104, 637, 1209
PpsI	GAGTC	4 cut(s)	91, 104, 637, 1209
PsiI	TTATAA	1 cut(s)	1095
Psp6I	CCWGG	1 cut(s)	15
PspFI	CCCAGC	1 cut(s)	1200
PspGI	CCWGG	1 cut(s)	15
PspN4I	GGNNCC	3 cut(s)	142, 665, 1404
PspPI	GGNCC	2 cut(s)	810, 1348
PspXI	VCTCGAGB	1 cut(s)	77
PsuI	RGATCY	1 cut(s)	1060
PvuII	CAGCTG	1 cut(s)	1200
RsaI	GTAC	1 cut(s)	414
RsaNI	GTAC	1 cut(s)	413
RseI	CAYNNNNRTG	2 cut(s)	386, 1008
SapI	GCTCTTC	1 cut(s)	301
SaqAI	TTAA	5 cut(s)	657, 843, 1133, 1296, 1671
SatI	GCNGC	5 cut(s)	22, 371, 1355, 1358, 1361
Sau3AI	GATC	7 cut(s)	46, 613, 849, 1060, 1300, 1455, 1681
Sau96I	GGNCC	2 cut(s)	810, 1348
SchI	GAGTC	4 cut(s)	92, 104, 638, 1209
ScrFI	CCNGG	1 cut(s)	17
SduI	GDGCHC	3 cut(s)	143, 234, 668
SfaNI	GCATC	2 cut(s)	1437, 1598
SfcI	CTRYAG	1 cut(s)	891
Sfr274I	CTCGAG	1 cut(s)	77
SgrAI	CRCCGGYG	1 cut(s)	261
SinI	GGWCC	1 cut(s)	1348
SlaI	CTCGAG	1 cut(s)	77
SmiMI	CAYNNNNRTG	2 cut(s)	386, 1008
SmlI	CTYRAG	2 cut(s)	77, 1364
SmoI	CTYRAG	2 cut(s)	77, 1364
Sse9I	AATT	8 cut(s)	608, 713, 844, 1161, 1169, 1336, 1414, 1664
SseBI	AGGCCT	1 cut(s)	75
SsiI	CCGC	3 cut(s)	738, 1048, 1240
SspMI	CTAG	3 cut(s)	417, 575, 626
StuI	AGGCCT	1 cut(s)	75
StyD4I	CCNGG	1 cut(s)	15
StyI	CCWWGG	1 cut(s)	122
TaaI	ACNGT	4 cut(s)	443, 841, 856, 1091
TaqI	TCGA	4 cut(s)	69, 78, 90, 1181
TasI	AATT	8 cut(s)	608, 713, 844, 1161, 1169, 1336, 1414, 1664
TfiI	GAWTC	5 cut(s)	127, 167, 830, 1109, 1178
Tru1I	TTAA	5 cut(s)	657, 843, 1133, 1296, 1671
Tru9I	TTAA	5 cut(s)	657, 843, 1133, 1296, 1671
TscAI	CASTG	2 cut(s)	294, 372
TseFI	GTSAC	2 cut(s)	881, 1471
TseI	GCWGC	5 cut(s)	21, 370, 1354, 1357, 1360
Tsp45I	GTSAC	2 cut(s)	881, 1471
TspDTI	ATGAA	8 cut(s)	570, 726, 753, 777, 843, 1239, 1245, 1671
TspGWI	ACGGA	3 cut(s)	328, 488, 746
TspRI	CASTG	2 cut(s)	294, 372
VpaK11BI	GGWCC	1 cut(s)	1348
XapI	RAATTY	4 cut(s)	608, 713, 1336, 1664
XbaI	TCTAGA	1 cut(s)	625
XhoI	CTCGAG	1 cut(s)	77
XspI	CTAG	3 cut(s)	417, 575, 626
Zsp2I	ATGCAT	2 cut(s)	1678, 1690

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.