Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001670.1

Orthogroup ID

OG0001183

Physical Location & Seq

Genomic Coordinates Forward (+)

110204 .. 116487

Gene Structure 6284 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001670.1_g000025.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

atgctgccggtccggtcacgtcttggctgtttctggatatctggttccggttcctggagcttggggtcgagttggctttggtggcaaagtatgaccgtgaaaagatgtctggaagcttgtgaaccaggcagggatatttttctctccttggagggccggtttggtacttttttgtccggttatgggggtggcgccgccggttttgaggtaatctcgaaagaatctctcttggctgcacagaggggcgatgtgcagagggtaatggatgtgctgtcgctgaaagagtaccatgcccgaaccttgctcatccattatcgttgggatgtcgacaaggtgcttgctgtgtatgtagagagggggaaagagttactatacgaaaaggctggtgtgactatggcggagcatgatgacacatcacagctttcatctgaggttatgtgtgatatttgcatggatgaaattccggctaatgaggtcacaatcatggattgcaatcacgttttttgtaacgaatgttggacagagcattttattgtgaaaataaacgagggtcaaagtaggcgcattaaatgcatggcacacaagtgcaatgctgtttgtgacgaagcaataatcagaaatctggtcagtgcgagggatcctaatctggcagagaagtttgatcgttttcttctggaatcatatattgaggataatagaaaggtgaagtggtgcccgagtatccctcattgtggaaatgctatacgtattgaggaagatgagttaatcgaggttgaatgtgcatgtggaaagcaattctgttttagttgcttatgtgaagcacactctccttgttcatgccaaatgtgggaccaatggttgaagaagtgcgtagatgaatcagagactgttaattacatttcagtcaacacaaagcattgcccaaaatgtaacaagctggttgaaaagaatggaggatgcaatctagttacctgtatctgtggacaaccattttgctggctttgtggtgccccaactggttcggatcatacatgggattccattgcaggtcatgagtgtggacgattcaaagaagacgaggagacggaccttgagcaaaccaagaaggacctatttcgttacactcactacttcaaccgttttcaagctcataaagattctcttaagcttgaagctgcgctgaagaaaaccgtacaaagaaaaataacatatttggaagaaaacttatcgtcatcgaaagattatagctggacaaccgatgcgctcaacagactctttagatcaaggcgaattattgcatattcctacccatttgcatatcacatgtttggtgatcttttcaaaaaagagatgacattagaacaaaggacgataaaacagaacttgtttgaggaccagcagcagcagcttgaggccagcatggagaagctttctatgtttacagaggaaccttttgaccattattcagaggagaagcttcacgatttaaaattgaggatgatcaatctttcgacgcttgttgataagctctgcctaaaattgtttgaatgcattgaatatgatttgctgggccaacttcaattttcagttcacagaattgtttcttacaactcgaacggcgtggagaaagcatcagaaattaacagctcaggcttagggcttttctggagcgatgatgtaaaaattcaaattggtaccaaatcggtgcatcatatcgatgcaatggtagtgggggaggctgggttgctgtcatggcggttgaccggattctatggctacgctcgtactggtgagagggataggtcatggcaattgatgcgcaacctctctgtacttgatactctgccttgggtggtgatatgggactttaacgagatcctgaatagtggggagaagatcgcaggaccggtgagactggagaggcagatacgtggattccgggaggctctagggtactgtgagctattggatctagggtttcagggattaatggctacgtggtggaactctgatactttattgcgtttggaccgcgctgtatgcacttcttcatgggtcgacatttttaaccatgttagggttctgcatctggcgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR zf-C3HC4

Protein Analysis

698

Amino Acids

80.35

Weight (kDa)

5.68

Isoelectric Point (pI)

40.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001183)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16090 AT2G16090 AT2G16090 AT2G16090 AT2G16090 AT4G34370
fragaria_vesca	FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g40440 FvH4_2g40440
malus_domestica	MD00G1039300.v1.1 MD05G1071700.v1.1 MD08G1037700.v1.1 MD10G1083500.v1.1
prunus_persica	Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.8G106500_v2.0.a1 Prupe.8G106500_v2.0.a1 Prupe.8G106500_v2.0.a1
pyrus_communis	pycom05g06180 pycom08g03000 pycom10g06560 pycom15g02930
rosa_chinensis	RchiOBHm_Chr6g0262251 RchiOBHm_Chr6g0300291
rosa_laevigata	RLG00000011350 RLG00000014443
rosa_multiflora	Rmu_sc0001670.1_g000025 Rmu_sc0002510.1_g000028
rosa_roxburghii	Rroxscaffold_7G00167920 Rroxscaffold_7G00207940
rosa_rugosa	Rorug05G0595800 Rorug05G0595800 Rorug05G0595900 Rorug05G0595900
rosa_samantha	Rh6AG116000 Rh6AG407300 Rh6BG110300 Rh6BG414900 Rh6CG107800 Rh6CG422200 Rh6DG098200 Rh6DG407900
rosa_wichuraiana	Rw0G017080 Rw6G010090 Rw6G035620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1820
Acc36I	ACCTGC	1 cut(s)	1037
Acc65I	GGTACC	1 cut(s)	1694
AccB1I	GGYRCC	4 cut(s)	191, 711, 1007, 1694
AccI	GTMKAC	2 cut(s)	327, 2058
AccII	CGCG	1 cut(s)	2034
AciI	CCGC	4 cut(s)	195, 398, 1756, 2032
AclWI	GGATC	5 cut(s)	632, 645, 1032, 1870, 1977
AcsI	RAATTY	2 cut(s)	459, 1683
AcuI	CTGAAG	1 cut(s)	1202
AcyI	GRCGYC	1 cut(s)	192
AfaI	GTAC	7 cut(s)	166, 287, 1194, 1696, 1786, 1833, 1955
AfiI	CCNNNNNNNGG	5 cut(s)	54, 183, 731, 847, 2077
AflII	CTTAAG	1 cut(s)	1163
AflIII	ACRYGT	1 cut(s)	1323
AgeI	ACCGGT	1 cut(s)	1906
AjiI	CACGTC	1 cut(s)	20
AjnI	CCWGG	2 cut(s)	53, 124
AleI	CACNNNNGTG	1 cut(s)	583
AloI	GAACNNNNNNTCC	2 cut(s)	28, 60
Alw26I	GTCTC	3 cut(s)	878, 1076, 1906
AlwI	GGATC	5 cut(s)	632, 645, 1032, 1870, 1977
AlwNI	CAGNNNCTG	1 cut(s)	887
Ama87I	CYCGRG	1 cut(s)	715
AoxI	GGCC	3 cut(s)	154, 1413, 1570
ApeKI	GCWGC	6 cut(s)	4, 233, 1175, 1399, 1402, 1405
ApoI	RAATTY	2 cut(s)	459, 1683
ArsI	GACNNNNNNTTYG	2 cut(s)	975, 1007
AseI	ATTAAT	1 cut(s)	1988
AsiGI	ACCGGT	1 cut(s)	1906
Asp700I	GAANNNNTTC	1 cut(s)	1600
Asp718I	GGTACC	1 cut(s)	1694
AspLEI	GCGC	6 cut(s)	194, 564, 1180, 1264, 1821, 2036
AspS9I	GGNCC	9 cut(s)	10, 154, 850, 1087, 1108, 1393, 1570, 1904, 2029
AsuC2I	CCSGG	1 cut(s)	1940
AsuHPI	GGTGA	5 cut(s)	715, 1343, 1802, 1867, 1921
AvaI	CYCGRG	1 cut(s)	715
AvaII	GGWCC	7 cut(s)	10, 850, 1087, 1108, 1393, 1904, 2029
BaeGI	GKGCMC	2 cut(s)	716, 1012
BamHI	GGATCC	1 cut(s)	637
BanI	GGYRCC	4 cut(s)	191, 711, 1007, 1694
BbsI	GAAGAC	1 cut(s)	1080
BbvI	GCAGC	5 cut(s)	220, 1162, 1411, 1414, 1417
BceAI	ACGGC	1 cut(s)	1633
BciT130I	CCWGG	2 cut(s)	55, 126
BciVI	GTATCC	1 cut(s)	731
BclI	TGATCA	1 cut(s)	1500
BcnI	CCSGG	1 cut(s)	1940
BcoDI	GTCTC	3 cut(s)	878, 1076, 1906
BfaI	CTAG	3 cut(s)	965, 1949, 1973
BfoI	RGCGCY	1 cut(s)	195
BfrI	CTTAAG	1 cut(s)	1163
BfuAI	ACCTGC	1 cut(s)	1037
BfuI	GTATCC	1 cut(s)	731
BisI	GCNGC	7 cut(s)	5, 195, 234, 1176, 1400, 1403, 1406
BlsI	GCNGC	7 cut(s)	6, 196, 235, 1177, 1401, 1404, 1407
Bme1390I	CCNGG	3 cut(s)	55, 126, 1940
Bme18I	GGWCC	7 cut(s)	10, 850, 1087, 1108, 1393, 1904, 2029
BmeT110I	CYCGRG	1 cut(s)	715
BmgBI	CACGTC	1 cut(s)	20
BmgT120I	GGNCC	9 cut(s)	10, 154, 850, 1087, 1108, 1393, 1570, 1904, 2029
BmiI	GGNNCC	9 cut(s)	46, 52, 193, 639, 713, 851, 1009, 1449, 1696
BmrFI	CCNGG	3 cut(s)	55, 126, 1940
BmsI	GCATC	6 cut(s)	947, 1249, 1640, 1708, 1717, 1806
BpiI	GAAGAC	1 cut(s)	1080
BplI	GAGNNNNNCTC	4 cut(s)	197, 229, 709, 741
BpmI	CTGGAG	3 cut(s)	76, 1687, 1937
Bpu10I	CCTNAGC	2 cut(s)	1648, 1654
BpuEI	CTTGAG	2 cut(s)	1112, 1430
BpuMI	CCSGG	1 cut(s)	1940
Bsa29I	ATCGAT	1 cut(s)	1716
BsaAI	YACGTR	3 cut(s)	746, 1931, 1998
BsaBI	GATNNNNATC	2 cut(s)	492, 642
BsaHI	GRCGYC	1 cut(s)	192
BsaJI	CCNNGG	2 cut(s)	147, 1847
BsaWI	WCCGGW	5 cut(s)	12, 47, 176, 1763, 1906
BsaXI	ACNNNNNCTCC	4 cut(s)	143, 173, 1727, 1757
Bsc4I	CCNNNNNNNGG	5 cut(s)	54, 183, 731, 847, 2077
Bse118I	RCCGGY	4 cut(s)	7, 156, 197, 1906
Bse1I	ACTGG	3 cut(s)	1021, 1792, 1920
Bse3DI	GCAATG	4 cut(s)	595, 916, 1041, 1728
Bse8I	GATNNNNATC	2 cut(s)	492, 642
BseBI	CCWGG	2 cut(s)	55, 126
BseCI	ATCGAT	1 cut(s)	1716
BseDI	CCNNGG	2 cut(s)	147, 1847
BseGI	GGATG	6 cut(s)	271, 306, 328, 460, 962, 1503
BseJI	GATNNNNATC	2 cut(s)	492, 642
BseLI	CCNNNNNNNGG	5 cut(s)	54, 183, 731, 847, 2077
BseMI	GCAATG	4 cut(s)	595, 916, 1041, 1728
BseMII	CTCAG	2 cut(s)	420, 1662
BseNI	ACTGG	3 cut(s)	1021, 1792, 1920
BseRI	GAGGAG	2 cut(s)	1094, 1484
BseSI	GKGCMC	2 cut(s)	716, 1012
BseXI	GCAGC	5 cut(s)	220, 1162, 1411, 1414, 1417
BseYI	CCCAGC	2 cut(s)	1567, 1739
BsgI	GTGCAG	2 cut(s)	219, 272
Bsh1236I	CGCG	1 cut(s)	2034
BshFI	GGCC	3 cut(s)	156, 1415, 1572
BshNI	GGYRCC	4 cut(s)	191, 711, 1007, 1694
BshTI	ACCGGT	1 cut(s)	1906
BshVI	ATCGAT	1 cut(s)	1716
BsiHKCI	CYCGRG	1 cut(s)	715
BslFI	GGGAC	2 cut(s)	863, 1877
BslI	CCNNNNNNNGG	5 cut(s)	54, 183, 731, 847, 2077
BsmAI	GTCTC	3 cut(s)	878, 1076, 1906
BsmBI	CGTCTC	1 cut(s)	1076
BsmFI	GGGAC	2 cut(s)	863, 1877
BsmI	GAATGC	1 cut(s)	1553
BsnI	GGCC	3 cut(s)	156, 1415, 1572
BsoBI	CYCGRG	1 cut(s)	715
Bsp1286I	GDGCHC	2 cut(s)	716, 1012
Bsp143I	GATC	9 cut(s)	637, 661, 1024, 1280, 1333, 1500, 1875, 1896, 1969
BspACI	CCGC	4 cut(s)	195, 398, 1756, 2032
BspANI	GGCC	3 cut(s)	156, 1415, 1572
BspCNI	CTCAG	2 cut(s)	421, 1661
BspDI	ATCGAT	1 cut(s)	1716
BspFNI	CGCG	1 cut(s)	2034
BspHI	TCATGA	1 cut(s)	1051
BspLI	GGNNCC	9 cut(s)	46, 52, 193, 639, 713, 851, 1009, 1449, 1696
BspMI	ACCTGC	1 cut(s)	1037
BspPI	GGATC	5 cut(s)	632, 645, 1032, 1870, 1977
BspT107I	GGYRCC	4 cut(s)	191, 711, 1007, 1694
BspTI	CTTAAG	1 cut(s)	1163
BsrDI	GCAATG	4 cut(s)	595, 916, 1041, 1728
BsrFI	RCCGGY	4 cut(s)	7, 156, 197, 1906
BsrI	ACTGG	3 cut(s)	1021, 1792, 1920
BssAI	RCCGGY	4 cut(s)	7, 156, 197, 1906
BssECI	CCNNGG	2 cut(s)	147, 1847
BssMI	GATC	9 cut(s)	637, 661, 1024, 1280, 1333, 1500, 1875, 1896, 1969
BssNI	GRCGYC	1 cut(s)	192
BssT1I	CCWWGG	2 cut(s)	147, 1847
Bst2UI	CCWGG	2 cut(s)	55, 126
Bst4CI	ACNGT	5 cut(s)	97, 889, 1139, 1192, 1958
BstACI	GRCGYC	1 cut(s)	192
BstAFI	CTTAAG	1 cut(s)	1163
BstAPI	GCANNNNNTGC	2 cut(s)	570, 1816
BstBAI	YACGTR	3 cut(s)	746, 1931, 1998
BstC8I	GCNNGC	3 cut(s)	339, 998, 1417
BstDEI	CTNAG	3 cut(s)	429, 1648, 1654
BstF5I	GGATG	6 cut(s)	271, 306, 328, 460, 962, 1503
BstFNI	CGCG	1 cut(s)	2034
BstH2I	RGCGCY	1 cut(s)	195
BstHHI	GCGC	6 cut(s)	194, 564, 1180, 1264, 1821, 2036
BstKTI	GATC	9 cut(s)	640, 664, 1027, 1283, 1336, 1503, 1878, 1899, 1972
BstMAI	GTCTC	3 cut(s)	878, 1076, 1906
BstMBI	GATC	9 cut(s)	637, 661, 1024, 1280, 1333, 1500, 1875, 1896, 1969
BstMWI	GCNNNNNNNGC	6 cut(s)	82, 570, 1405, 1753, 1816, 2040
BstNI	CCWGG	2 cut(s)	55, 126
BstNSI	RCATGY	2 cut(s)	786, 1327
BstSCI	CCNGG	3 cut(s)	53, 124, 1938
BstSLI	GKGCMC	2 cut(s)	716, 1012
BstSNI	TACGTA	1 cut(s)	746
BstUI	CGCG	1 cut(s)	2034
BstV1I	GCAGC	5 cut(s)	220, 1162, 1411, 1414, 1417
BstV2I	GAAGAC	1 cut(s)	1080
BstX2I	RGATCY	3 cut(s)	637, 1875, 1969
BstXI	CCANNNNNNTGG	1 cut(s)	996
BstYI	RGATCY	3 cut(s)	637, 1875, 1969
Bsu15I	ATCGAT	1 cut(s)	1716
BsuI	GTATCC	1 cut(s)	731
BsuRI	GGCC	3 cut(s)	156, 1415, 1572
BsuTUI	ATCGAT	1 cut(s)	1716
BtgZI	GCGATG	2 cut(s)	261, 1686
BtrI	CACGTC	1 cut(s)	20
BtsCI	GGATG	6 cut(s)	271, 306, 328, 460, 962, 1503
BtsIMutI	CAGTG	1 cut(s)	634
BveI	ACCTGC	1 cut(s)	1037
Cac8I	GCNNGC	3 cut(s)	339, 998, 1417
CaiI	CAGNNNCTG	1 cut(s)	887
CciI	TCATGA	1 cut(s)	1051
CfoI	GCGC	6 cut(s)	194, 564, 1180, 1264, 1821, 2036
Cfr10I	RCCGGY	4 cut(s)	7, 156, 197, 1906
Cfr13I	GGNCC	9 cut(s)	10, 154, 850, 1087, 1108, 1393, 1570, 1904, 2029
ClaI	ATCGAT	1 cut(s)	1716
CpoI	CGGWCCG	1 cut(s)	10
CseI	GACGC	1 cut(s)	1522
Csp6I	GTAC	7 cut(s)	165, 286, 1193, 1695, 1785, 1832, 1954
CspAI	ACCGGT	1 cut(s)	1906
CspCI	CAANNNNNGTGG	2 cut(s)	1710, 1745
CspI	CGGWCCG	1 cut(s)	10
CviQI	GTAC	7 cut(s)	165, 286, 1193, 1695, 1785, 1832, 1954
DdeI	CTNAG	3 cut(s)	429, 1648, 1654
DinI	GGCGCC	1 cut(s)	193
DpnI	GATC	9 cut(s)	639, 663, 1026, 1282, 1335, 1502, 1877, 1898, 1971
DpnII	GATC	9 cut(s)	637, 661, 1024, 1280, 1333, 1500, 1875, 1896, 1969
DraI	TTTAAA	1 cut(s)	1488
EciI	GGCGGA	1 cut(s)	413
Eco105I	TACGTA	1 cut(s)	746
Eco130I	CCWWGG	2 cut(s)	147, 1847
Eco32I	GATATC	1 cut(s)	39
Eco47I	GGWCC	7 cut(s)	10, 850, 1087, 1108, 1393, 1904, 2029
Eco57I	CTGAAG	1 cut(s)	1202
Eco88I	CYCGRG	1 cut(s)	715
EcoO109I	RGGNCCY	1 cut(s)	1108
EcoRII	CCWGG	2 cut(s)	53, 124
EcoRV	GATATC	1 cut(s)	39
EcoT14I	CCWWGG	2 cut(s)	147, 1847
EcoT22I	ATGCAT	2 cut(s)	575, 1553
EgeI	GGCGCC	1 cut(s)	193
EheI	GGCGCC	1 cut(s)	193
ErhI	CCWWGG	2 cut(s)	147, 1847
Esp3I	CGTCTC	1 cut(s)	1076
FalI	AAGNNNNNCTT	2 cut(s)	1146, 1178
FaqI	GGGAC	2 cut(s)	863, 1877
FbaI	TGATCA	1 cut(s)	1500
FblI	GTMKAC	2 cut(s)	327, 2058
Fnu4HI	GCNGC	7 cut(s)	5, 195, 234, 1176, 1400, 1403, 1406
FokI	GGATG	6 cut(s)	278, 293, 335, 467, 969, 1510
Fsp4HI	GCNGC	7 cut(s)	5, 195, 234, 1176, 1400, 1403, 1406
FspBI	CTAG	3 cut(s)	965, 1949, 1973
FspI	TGCGCA	1 cut(s)	1820
GlaI	GCGC	6 cut(s)	193, 563, 1179, 1263, 1820, 2035
GluI	GCNGC	7 cut(s)	5, 195, 234, 1176, 1400, 1403, 1406
GsaI	CCCAGC	2 cut(s)	1571, 1743
GsuI	CTGGAG	3 cut(s)	76, 1687, 1937
HaeII	RGCGCY	1 cut(s)	195
HaeIII	GGCC	3 cut(s)	156, 1415, 1572
HgaI	GACGC	1 cut(s)	1522
HhaI	GCGC	6 cut(s)	194, 564, 1180, 1264, 1821, 2036
Hin1I	GRCGYC	1 cut(s)	192
Hin6I	GCGC	6 cut(s)	192, 562, 1178, 1262, 1819, 2034
HinP1I	GCGC	6 cut(s)	192, 562, 1178, 1262, 1819, 2034
HincII	GTYRAC	4 cut(s)	328, 907, 1761, 2059
HindII	GTYRAC	4 cut(s)	328, 907, 1761, 2059
HindIII	AAGCTT	4 cut(s)	114, 1166, 1427, 1475
HinfI	GANTC	9 cut(s)	221, 677, 878, 1037, 1065, 1157, 1272, 1767, 1935
HphI	GGTGA	5 cut(s)	715, 1343, 1802, 1867, 1921
Hpy166II	GTNNAC	9 cut(s)	122, 328, 907, 983, 1061, 1440, 1591, 1761, 2059
Hpy188I	TCNGA	7 cut(s)	430, 617, 883, 1024, 1468, 1636, 2011
Hpy188III	TCNNGA	8 cut(s)	34, 110, 214, 674, 1052, 1481, 1666, 1879
Hpy8I	GTNNAC	9 cut(s)	122, 328, 907, 983, 1061, 1440, 1591, 1761, 2059
Hpy99I	CGWCG	1 cut(s)	1516
HpyAV	CCTTC	1 cut(s)	1099
HpyCH4III	ACNGT	5 cut(s)	97, 889, 1139, 1192, 1958
HpyCH4IV	ACGT	5 cut(s)	19, 498, 745, 1930, 1997
HpyF10VI	GCNNNNNNNGC	6 cut(s)	82, 570, 1405, 1753, 1816, 2040
HpyF3I	CTNAG	3 cut(s)	429, 1648, 1654
HpySE526I	ACGT	5 cut(s)	19, 498, 745, 1930, 1997
Hsp92I	GRCGYC	1 cut(s)	192
HspAI	GCGC	6 cut(s)	192, 562, 1178, 1262, 1819, 2034
KasI	GGCGCC	1 cut(s)	191
KpnI	GGTACC	1 cut(s)	1698
Ksp22I	TGATCA	1 cut(s)	1500
Kzo9I	GATC	9 cut(s)	637, 661, 1024, 1280, 1333, 1500, 1875, 1896, 1969
LmnI	GCTCC	3 cut(s)	57, 400, 1668
Lsp1109I	GCAGC	5 cut(s)	220, 1162, 1411, 1414, 1417
LweI	GCATC	6 cut(s)	947, 1249, 1640, 1708, 1717, 1806
MaeI	CTAG	3 cut(s)	965, 1949, 1973
MaeII	ACGT	5 cut(s)	19, 498, 745, 1930, 1997
MaeIII	GTNAC	9 cut(s)	15, 366, 388, 475, 506, 599, 929, 967, 1118
MalI	GATC	9 cut(s)	639, 663, 1026, 1282, 1335, 1502, 1877, 1898, 1971
MboI	GATC	9 cut(s)	637, 661, 1024, 1280, 1333, 1500, 1875, 1896, 1969
MboII	GAAGA	8 cut(s)	662, 767, 874, 1085, 1195, 1229, 1906, 2040
MfeI	CAATTG	1 cut(s)	1811
MflI	RGATCY	3 cut(s)	637, 1875, 1969
MhlI	GDGCHC	2 cut(s)	716, 1012
Mly113I	GGCGCC	1 cut(s)	192
MlyI	GAGTC	1 cut(s)	1266
MmeI	TCCRAC	1 cut(s)	497
Mph1103I	ATGCAT	2 cut(s)	575, 1553
MroXI	GAANNNNTTC	1 cut(s)	1600
MseI	TTAA	9 cut(s)	567, 764, 891, 1164, 1487, 1641, 1869, 1988, 2067
MslI	CAYNNNNRTG	4 cut(s)	482, 583, 1056, 1716
MspCI	CTTAAG	1 cut(s)	1163
MspR9I	CCNGG	3 cut(s)	55, 126, 1940
MunI	CAATTG	1 cut(s)	1811
Mva1269I	GAATGC	1 cut(s)	1553
MvaI	CCWGG	2 cut(s)	55, 126
MvnI	CGCG	1 cut(s)	2034
MwoI	GCNNNNNNNGC	6 cut(s)	82, 570, 1405, 1753, 1816, 2040
NarI	GGCGCC	1 cut(s)	192
NciI	CCSGG	1 cut(s)	1940
NdeII	GATC	9 cut(s)	637, 661, 1024, 1280, 1333, 1500, 1875, 1896, 1969
NlaIV	GGNNCC	9 cut(s)	46, 52, 193, 639, 713, 851, 1009, 1449, 1696
NmuCI	GTSAC	4 cut(s)	15, 388, 475, 599
NsbI	TGCGCA	1 cut(s)	1820
NsiI	ATGCAT	2 cut(s)	575, 1553
NspI	RCATGY	2 cut(s)	786, 1327
OliI	CACNNNNGTG	1 cut(s)	583
PagI	TCATGA	1 cut(s)	1051
PciI	ACATGT	1 cut(s)	1323
PctI	GAATGC	1 cut(s)	1553
PdmI	GAANNNNTTC	1 cut(s)	1600
PfeI	GAWTC	8 cut(s)	221, 677, 878, 1037, 1065, 1157, 1767, 1935
PfoI	TCCNGGA	2 cut(s)	53, 1938
PinAI	ACCGGT	1 cut(s)	1906
PkrI	GCNGC	7 cut(s)	6, 196, 235, 1177, 1401, 1404, 1407
PleI	GAGTC	1 cut(s)	1266
PluTI	GGCGCC	1 cut(s)	195
PpsI	GAGTC	1 cut(s)	1266
Ppu21I	YACGTR	3 cut(s)	746, 1931, 1998
PpuMI	RGGWCCY	1 cut(s)	1108
PscI	ACATGT	1 cut(s)	1323
PshBI	ATTAAT	1 cut(s)	1988
Psp5II	RGGWCCY	1 cut(s)	1108
Psp6I	CCWGG	2 cut(s)	53, 124
PspFI	CCCAGC	2 cut(s)	1567, 1739
PspGI	CCWGG	2 cut(s)	53, 124
PspN4I	GGNNCC	9 cut(s)	46, 52, 193, 639, 713, 851, 1009, 1449, 1696
PspPI	GGNCC	9 cut(s)	10, 154, 850, 1087, 1108, 1393, 1570, 1904, 2029
PspPPI	RGGWCCY	1 cut(s)	1108
PstNI	CAGNNNCTG	1 cut(s)	887
PsuI	RGATCY	3 cut(s)	637, 1875, 1969
RsaI	GTAC	7 cut(s)	166, 287, 1194, 1696, 1786, 1833, 1955
RsaNI	GTAC	7 cut(s)	165, 286, 1193, 1695, 1785, 1832, 1954
RseI	CAYNNNNRTG	4 cut(s)	482, 583, 1056, 1716
Rsr2I	CGGWCCG	1 cut(s)	10
RsrII	CGGWCCG	1 cut(s)	10
SalI	GTCGAC	2 cut(s)	326, 2057
SaqAI	TTAA	9 cut(s)	567, 764, 891, 1164, 1487, 1641, 1869, 1988, 2067
SatI	GCNGC	7 cut(s)	5, 195, 234, 1176, 1400, 1403, 1406
Sau3AI	GATC	9 cut(s)	637, 661, 1024, 1280, 1333, 1500, 1875, 1896, 1969
Sau96I	GGNCC	9 cut(s)	10, 154, 850, 1087, 1108, 1393, 1570, 1904, 2029
SchI	GAGTC	1 cut(s)	1266
ScrFI	CCNGG	3 cut(s)	55, 126, 1940
SduI	GDGCHC	2 cut(s)	716, 1012
SfaNI	GCATC	6 cut(s)	947, 1249, 1640, 1708, 1717, 1806
SfoI	GGCGCC	1 cut(s)	193
SinI	GGWCC	7 cut(s)	10, 850, 1087, 1108, 1393, 1904, 2029
SmiMI	CAYNNNNRTG	4 cut(s)	482, 583, 1056, 1716
SmlI	CTYRAG	3 cut(s)	1091, 1163, 1409
SmoI	CTYRAG	3 cut(s)	1091, 1163, 1409
SnaBI	TACGTA	1 cut(s)	746
SsiI	CCGC	4 cut(s)	195, 398, 1756, 2032
SspDI	GGCGCC	1 cut(s)	191
SspMI	CTAG	3 cut(s)	965, 1949, 1973
StyD4I	CCNGG	3 cut(s)	53, 124, 1938
StyI	CCWWGG	2 cut(s)	147, 1847
TaaI	ACNGT	5 cut(s)	97, 889, 1139, 1192, 1958
TaiI	ACGT	5 cut(s)	22, 501, 748, 1933, 2000
TaqI	TCGA	9 cut(s)	68, 215, 327, 768, 1235, 1511, 1613, 1716, 2058
TatI	WGTACW	1 cut(s)	1831
TauI	GCSGC	1 cut(s)	197
TfiI	GAWTC	8 cut(s)	221, 677, 878, 1037, 1065, 1157, 1767, 1935
Tru1I	TTAA	9 cut(s)	567, 764, 891, 1164, 1487, 1641, 1869, 1988, 2067
Tru9I	TTAA	9 cut(s)	567, 764, 891, 1164, 1487, 1641, 1869, 1988, 2067
TscAI	CASTG	1 cut(s)	634
TseFI	GTSAC	4 cut(s)	15, 388, 475, 599
TseI	GCWGC	6 cut(s)	4, 233, 1175, 1399, 1402, 1405
Tsp45I	GTSAC	4 cut(s)	15, 388, 475, 599
TspDTI	ATGAA	5 cut(s)	414, 471, 825, 891, 2040
TspGWI	ACGGA	1 cut(s)	1100
TspRI	CASTG	1 cut(s)	634
Vha464I	CTTAAG	1 cut(s)	1163
VpaK11BI	GGWCC	7 cut(s)	10, 850, 1087, 1108, 1393, 1904, 2029
VspI	ATTAAT	1 cut(s)	1988
XapI	RAATTY	2 cut(s)	459, 1683
XceI	RCATGY	2 cut(s)	786, 1327
XmiI	GTMKAC	2 cut(s)	327, 2058
XmnI	GAANNNNTTC	1 cut(s)	1600
XspI	CTAG	3 cut(s)	965, 1949, 1973
Zsp2I	ATGCAT	2 cut(s)	575, 1553

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.