Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0001183

Physical Location & Seq

Genomic Coordinates Forward (+)

12216423 .. 12221105

Gene Structure 4683 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1083500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGGAGGATTGCTTGGTCAGCGACGAGGAGTACTATTACTCCGATCAGGACTCTCTCGACGTCATCGAGAACGAAGACTGTGATCTTCAGTGGATTCCCCCCAAGGGCGCCACTACTAAGGTGATTACCAAAGAATCTCTTTTAACTGCACAGGAGGATTTGCGCAGGGTGATGGACATGCTATTCCTTAGGGAGCACCATGCCAGGACTTTACTTATTCATCATCGCTGGGATGTCGATAGGCTTTTTGCAGTGTATGTAGATAAGGGAAAATCTTGGTTGTTTGCTGAAGCAGGTGTAACTGTCGTTGAGCATCACGATCTTGATCCATCACCTCCCAATTCACCACTAATGTGTGCTATTTGTATAGAAGATGTACCTAGTAATGAGACGACAAAAATGGATTGCGGACATTGCTTTTGCAACACTTGTTGGACAGAGCATTTCGTCGTAAAGATAAATGAGGGTCAAAGTAAGCGCATTAGGTGCATGGCTCACAAATGCAATGCCATTTGTGATGAAGCCGTTGTCAGAAATCTAGTCAGTAAGAGGCATCCCCAGCTTGCTGAAAAATTTGACCGTTTTCTTCTTGAGTCATATATTGAAGACAATAAAAGGGTTAAGTGGTGCCCAAGCACTCCTCATTGTGGGAATGCAATACGCGTCGAGGATGATCAGTTTTGTGAGATAGAATGTTCATGTGGTCTACAATTTTGTTTCAGTTGTTTATCACAAGCTCATTCACCTTGTTCATGTTTAATGTGGGAGCTTTGGGCCAAGAAGTGCCGAGATGAATCAGAGACAGTTAATTGGATCACAGTTCATACAAAACCTTGTCCTAAATGTCACAAACCCGTGGAGAAGAATGGTGGCTGCAACCTTGTGAGCTGTATCTGTGGACAAGCATTTTGTTGGCTATGTGGTGGAGCGACTGGTCGAAACCATACATGGTCAAGTATTGCAGGTCATAGCTGTGGTCGGTACAAAGAAGACAAAGAAAAAAATGCTGAGAGGGCAAAGCGGGATCTTTACCGGTATATGCACTATCATAACCGGTACAAAGCTCATACTGATTCCTTTAAGCTTGAAAGTAACTTGGAGGAGAGTATACAAAAGAAGGTGTCAATTTCAGAGGAGAAGGATTCGAATCTCAGAGATTTTAGTTGGGTAAACAATGGACTCTCCAGACTTTTCAGATCAAGGAGGGTTCTTTCATATTCGTACCCATTTGCTTTTTATATGTTTGGAGAAGAGCTGTTTAAGGATGAGATGACAAAGGAGGAAAGGGAAATAAAACAAAATTTGTTTGAGGACCAGCAGCAGCAACTTGAGGAAAATGTTGAGAAATTATCCAAGTGTTTGGAGTCGCCTTTTGATCAGTATAGTGAGAATGAAGTTATGGATATAAGGATGCAAGTGATCAATCTCTCAGCAGTTACAGATACCCTATGTCAGAAAATGTATGACTGTATTGAGACTGATTTATTGGGCTCTCTACAACTTGGTATCCACAACATAGCTCCTTACAAGTCAAAGGGCATTGAGAAGGCATCAGACCTTCCCGTTAGTTGGGTCAATAATGCTGATAAAGGTCTAGCGTTGCATTGCGGCACAAGCGGAGGATCGACAGAACTGGAACAACCTTCAGGTTTTGGAAGTTCAGATGAGAGTGGATGCTCTTCTCGGAAGCGTGCTAGGAAGGAGGGTCTTGGAGGTGGTTTTGATCTAAACTTGCCAGCAGAGGTTGACAGATCTGATTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR

Protein Analysis

588

Amino Acids

67.15

Weight (kDa)

5.47

Isoelectric Point (pI)

60.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_ARI1	PF21235	51 - 88	4.5e-07	E3 ubiquitin-protein ligase ARIH1, UBA-like domain
IBR	PF01485	190 - 252	7e-14	IBR domain, a half RING-finger domain
IBR_2	PF22605	272 - 310	3.3e-07	IBR domain
IBR_1	PF22191	275 - 309	4.9e-06	IBR domain
Rcat_RNF216	PF26200	276 - 345	8.3e-07	RNF216 Rcat domain
Ariadne	PF19422	344 - 583	2.9e-129	Ariadne domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001183)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16090 AT2G16090 AT2G16090 AT2G16090 AT2G16090 AT4G34370
fragaria_vesca	FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g40440 FvH4_2g40440
malus_domestica	MD00G1039300.v1.1 MD05G1071700.v1.1 MD08G1037700.v1.1 MD10G1083500.v1.1
prunus_persica	Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.8G106500_v2.0.a1 Prupe.8G106500_v2.0.a1 Prupe.8G106500_v2.0.a1
pyrus_communis	pycom05g06180 pycom08g03000 pycom10g06560 pycom15g02930
rosa_chinensis	RchiOBHm_Chr6g0262251 RchiOBHm_Chr6g0300291
rosa_laevigata	RLG00000011350 RLG00000014443
rosa_multiflora	Rmu_sc0001670.1_g000025 Rmu_sc0002510.1_g000028
rosa_roxburghii	Rroxscaffold_7G00167920 Rroxscaffold_7G00207940
rosa_rugosa	Rorug05G0595800 Rorug05G0595800 Rorug05G0595900 Rorug05G0595900
rosa_samantha	Rh6AG116000 Rh6AG407300 Rh6BG110300 Rh6BG414900 Rh6CG107800 Rh6CG422200 Rh6DG098200 Rh6DG407900
rosa_wichuraiana	Rw0G017080 Rw6G010090 Rw6G035620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	284
AatII	GACGTC	1 cut(s)	63
Acc16I	TGCGCA	1 cut(s)	164
Acc36I	ACCTGC	2 cut(s)	284, 953
AccB1I	GGYRCC	2 cut(s)	107, 627
AccI	GTMKAC	2 cut(s)	706, 1108
AccII	CGCG	1 cut(s)	663
AciI	CCGC	4 cut(s)	408, 1021, 1608, 1617
AclWI	GGATC	4 cut(s)	320, 821, 1032, 1630
AcsI	RAATTY	2 cut(s)	572, 1300
AcuI	CTGAAG	3 cut(s)	71, 309, 1629
AcyI	GRCGYC	2 cut(s)	60, 108
AfaI	GTAC	5 cut(s)	32, 378, 983, 1058, 1223
AfiI	CCNNNNNNNGG	3 cut(s)	104, 647, 1569
AflIII	ACRYGT	1 cut(s)	661
AgeI	ACCGGT	2 cut(s)	1032, 1053
AgsI	TTSAA	2 cut(s)	605, 1088
AjnI	CCWGG	1 cut(s)	203
AleI	CACNNNNGTG	1 cut(s)	352
AluBI	AGCT	9 cut(s)	562, 737, 769, 888, 972, 1064, 1084, 1255, 1520
AluI	AGCT	9 cut(s)	562, 737, 769, 888, 972, 1064, 1084, 1255, 1520
Alw21I	GWGCWC	1 cut(s)	198
Alw26I	GTCTC	3 cut(s)	383, 794, 1469
AlwI	GGATC	4 cut(s)	320, 821, 1032, 1630
AoxI	GGCC	1 cut(s)	774
ApeKI	GCWGC	3 cut(s)	873, 1318, 1321
ApoI	RAATTY	2 cut(s)	572, 1300
ArsI	GACNNNNNNTTYG	4 cut(s)	402, 434, 891, 923
AsiGI	ACCGGT	2 cut(s)	1032, 1053
AspLEI	GCGC	3 cut(s)	110, 165, 480
AspS9I	GGNCC	2 cut(s)	774, 1312
AsuHPI	GGTGA	5 cut(s)	133, 181, 324, 336, 735
AsuII	TTCGAA	1 cut(s)	1145
AvaII	GGWCC	1 cut(s)	1312
AxyI	CCTNAGG	1 cut(s)	188
BaeGI	GKGCMC	1 cut(s)	632
BanI	GGYRCC	2 cut(s)	107, 627
BanII	GRGCYC	1 cut(s)	1493
BbsI	GAAGAC	3 cut(s)	81, 612, 996
Bbv12I	GWGCWC	1 cut(s)	198
BbvI	GCAGC	3 cut(s)	860, 1330, 1333
BccI	CCATC	2 cut(s)	166, 337
BceAI	ACGGC	1 cut(s)	509
BciT130I	CCWGG	1 cut(s)	205
BciVI	GTATCC	1 cut(s)	1517
BclI	TGATCA	3 cut(s)	673, 1375, 1419
BcoDI	GTCTC	3 cut(s)	383, 794, 1469
BfaI	CTAG	4 cut(s)	381, 539, 1595, 1695
BfoI	RGCGCY	1 cut(s)	111
BfuAI	ACCTGC	2 cut(s)	284, 953
BfuI	GTATCC	1 cut(s)	1517
BglII	AGATCT	1 cut(s)	1751
BisI	GCNGC	4 cut(s)	874, 1319, 1322, 1609
BlsI	GCNGC	4 cut(s)	875, 1320, 1323, 1610
BmcAI	AGTACT	1 cut(s)	32
Bme1390I	CCNGG	1 cut(s)	205
Bme18I	GGWCC	1 cut(s)	1312
BmgT120I	GGNCC	2 cut(s)	774, 1312
BmiI	GGNNCC	2 cut(s)	109, 629
BmrFI	CCNGG	1 cut(s)	205
BmsI	GCATC	5 cut(s)	322, 562, 1401, 1559, 1664
BpiI	GAAGAC	3 cut(s)	81, 612, 996
BpmI	CTGGAG	1 cut(s)	1168
Bpu14I	TTCGAA	1 cut(s)	1145
BpuEI	CTTGAG	2 cut(s)	611, 1349
BsaBI	GATNNNNATC	2 cut(s)	324, 1146
BsaHI	GRCGYC	2 cut(s)	60, 108
BsaJI	CCNNGG	2 cut(s)	102, 855
BsaWI	WCCGGW	2 cut(s)	1032, 1053
BsaXI	ACNNNNNCTCC	2 cut(s)	23, 53
Bsc4I	CCNNNNNNNGG	3 cut(s)	104, 647, 1569
Bse118I	RCCGGY	2 cut(s)	1032, 1053
Bse1I	ACTGG	2 cut(s)	937, 1638
Bse21I	CCTNAGG	1 cut(s)	188
Bse3DI	GCAATG	3 cut(s)	412, 511, 1603
Bse8I	GATNNNNATC	2 cut(s)	324, 1146
BseBI	CCWGG	1 cut(s)	205
BseDI	CCNNGG	2 cut(s)	102, 855
BseGI	GGATG	6 cut(s)	238, 553, 676, 1270, 1416, 1679
BseJI	GATNNNNATC	2 cut(s)	324, 1146
BseLI	CCNNNNNNNGG	3 cut(s)	104, 647, 1569
BseMI	GCAATG	3 cut(s)	412, 511, 1603
BseMII	CTCAG	3 cut(s)	999, 1165, 1443
BseNI	ACTGG	2 cut(s)	937, 1638
BseRI	GAGGAG	4 cut(s)	41, 630, 1115, 1148
BseSI	GKGCMC	1 cut(s)	632
BseXI	GCAGC	3 cut(s)	860, 1330, 1333
BseYI	CCCAGC	2 cut(s)	228, 558
BsgI	GTGCAG	1 cut(s)	132
Bsh1236I	CGCG	1 cut(s)	663
BshFI	GGCC	1 cut(s)	776
BshNI	GGYRCC	2 cut(s)	107, 627
BshTI	ACCGGT	2 cut(s)	1032, 1053
BsiHKAI	GWGCWC	1 cut(s)	198
BsiSI	CCGG	2 cut(s)	1033, 1054
BslI	CCNNNNNNNGG	3 cut(s)	104, 647, 1569
BsmAI	GTCTC	3 cut(s)	383, 794, 1469
BsmBI	CGTCTC	1 cut(s)	383
BsmI	GAATGC	1 cut(s)	658
BsnI	GGCC	1 cut(s)	776
Bsp119I	TTCGAA	1 cut(s)	1145
Bsp1286I	GDGCHC	3 cut(s)	198, 632, 1493
BspACI	CCGC	4 cut(s)	408, 1021, 1608, 1617
BspANI	GGCC	1 cut(s)	776
BspCNI	CTCAG	3 cut(s)	1000, 1164, 1442
BspFNI	CGCG	1 cut(s)	663
BspHI	TCATGA	1 cut(s)	1760
BspLI	GGNNCC	2 cut(s)	109, 629
BspMI	ACCTGC	2 cut(s)	284, 953
BspPI	GGATC	4 cut(s)	320, 821, 1032, 1630
BspQI	GCTCTTC	2 cut(s)	1245, 1684
BspT104I	TTCGAA	1 cut(s)	1145
BspT107I	GGYRCC	2 cut(s)	107, 627
BsrDI	GCAATG	3 cut(s)	412, 511, 1603
BsrFI	RCCGGY	2 cut(s)	1032, 1053
BsrI	ACTGG	2 cut(s)	937, 1638
BssAI	RCCGGY	2 cut(s)	1032, 1053
BssECI	CCNNGG	2 cut(s)	102, 855
BssNAI	GTATAC	1 cut(s)	1109
BssNI	GRCGYC	2 cut(s)	60, 108
BssT1I	CCWWGG	1 cut(s)	102
Bst1107I	GTATAC	1 cut(s)	1109
Bst2UI	CCWGG	1 cut(s)	205
Bst4CI	ACNGT	6 cut(s)	80, 304, 581, 805, 820, 1469
Bst6I	CTCTTC	2 cut(s)	1245, 1684
BstACI	GRCGYC	2 cut(s)	60, 108
BstAPI	GCANNNNNTGC	1 cut(s)	486
BstBI	TTCGAA	1 cut(s)	1145
BstC8I	GCNNGC	3 cut(s)	564, 1692, 1737
BstDEI	CTNAG	5 cut(s)	117, 188, 1008, 1151, 1429
BstDSI	CCRYGG	1 cut(s)	855
BstF5I	GGATG	6 cut(s)	238, 553, 676, 1270, 1416, 1679
BstFNI	CGCG	1 cut(s)	663
BstH2I	RGCGCY	1 cut(s)	111
BstHHI	GCGC	3 cut(s)	110, 165, 480
BstMAI	GTCTC	3 cut(s)	383, 794, 1469
BstMWI	GCNNNNNNNGC	6 cut(s)	18, 414, 486, 559, 1013, 1614
BstNI	CCWGG	1 cut(s)	205
BstNSI	RCATGY	1 cut(s)	181
BstSCI	CCNGG	1 cut(s)	203
BstSLI	GKGCMC	1 cut(s)	632
BstUI	CGCG	1 cut(s)	663
BstV1I	GCAGC	3 cut(s)	860, 1330, 1333
BstV2I	GAAGAC	3 cut(s)	81, 612, 996
BstX2I	RGATCY	2 cut(s)	1024, 1751
BstXI	CCANNNNNNTGG	1 cut(s)	1360
BstYI	RGATCY	2 cut(s)	1024, 1751
BstZ17I	GTATAC	1 cut(s)	1109
Bsu36I	CCTNAGG	1 cut(s)	188
BsuI	GTATCC	1 cut(s)	1517
BsuRI	GGCC	1 cut(s)	776
BtgI	CCRYGG	1 cut(s)	855
BtgZI	GCGATG	1 cut(s)	209
BtsCI	GGATG	6 cut(s)	238, 553, 676, 1270, 1416, 1679
BtsI	GCAGTG	1 cut(s)	258
BtsIMutI	CAGTG	2 cut(s)	95, 258
BveI	ACCTGC	2 cut(s)	284, 953
Cac8I	GCNNGC	3 cut(s)	564, 1692, 1737
CciI	TCATGA	1 cut(s)	1760
CfoI	GCGC	3 cut(s)	110, 165, 480
Cfr10I	RCCGGY	2 cut(s)	1032, 1053
Cfr13I	GGNCC	2 cut(s)	774, 1312
CseI	GACGC	1 cut(s)	652
Csp6I	GTAC	5 cut(s)	31, 377, 982, 1057, 1222
CspAI	ACCGGT	2 cut(s)	1032, 1053
CviAII	CATG	7 cut(s)	178, 200, 490, 699, 753, 948, 1761
CviQI	GTAC	5 cut(s)	31, 377, 982, 1057, 1222
DdeI	CTNAG	5 cut(s)	117, 188, 1008, 1151, 1429
DinI	GGCGCC	1 cut(s)	109
Eam1104I	CTCTTC	2 cut(s)	1245, 1684
EarI	CTCTTC	2 cut(s)	1245, 1684
Eco130I	CCWWGG	1 cut(s)	102
Eco24I	GRGCYC	1 cut(s)	1493
Eco47I	GGWCC	1 cut(s)	1312
Eco57I	CTGAAG	3 cut(s)	71, 309, 1629
Eco81I	CCTNAGG	1 cut(s)	188
EcoRII	CCWGG	1 cut(s)	203
EcoT14I	CCWWGG	1 cut(s)	102
EcoT38I	GRGCYC	1 cut(s)	1493
EgeI	GGCGCC	1 cut(s)	109
EheI	GGCGCC	1 cut(s)	109
ErhI	CCWWGG	1 cut(s)	102
Esp3I	CGTCTC	1 cut(s)	383
FaeI	CATG	7 cut(s)	181, 203, 493, 702, 756, 951, 1764
FalI	AAGNNNNNCTT	2 cut(s)	123, 155
FatI	CATG	7 cut(s)	177, 199, 489, 698, 752, 947, 1760
FauI	CCCGC	1 cut(s)	1014
FbaI	TGATCA	3 cut(s)	673, 1375, 1419
FblI	GTMKAC	2 cut(s)	706, 1108
Fnu4HI	GCNGC	4 cut(s)	874, 1319, 1322, 1609
FokI	GGATG	6 cut(s)	245, 540, 683, 1277, 1423, 1686
FriOI	GRGCYC	1 cut(s)	1493
Fsp4HI	GCNGC	4 cut(s)	874, 1319, 1322, 1609
FspBI	CTAG	4 cut(s)	381, 539, 1595, 1695
FspI	TGCGCA	1 cut(s)	164
GlaI	GCGC	3 cut(s)	109, 164, 479
GluI	GCNGC	4 cut(s)	874, 1319, 1322, 1609
GsaI	CCCAGC	2 cut(s)	232, 562
GsuI	CTGGAG	1 cut(s)	1168
HaeII	RGCGCY	1 cut(s)	111
HaeIII	GGCC	1 cut(s)	776
HapII	CCGG	2 cut(s)	1033, 1054
HgaI	GACGC	1 cut(s)	652
HhaI	GCGC	3 cut(s)	110, 165, 480
Hin1I	GRCGYC	2 cut(s)	60, 108
Hin1II	CATG	7 cut(s)	181, 203, 493, 702, 756, 951, 1764
Hin6I	GCGC	3 cut(s)	108, 163, 478
HinP1I	GCGC	3 cut(s)	108, 163, 478
HincII	GTYRAC	1 cut(s)	1747
HindII	GTYRAC	1 cut(s)	1747
HindIII	AAGCTT	1 cut(s)	1082
HpaII	CCGG	2 cut(s)	1033, 1054
HphI	GGTGA	5 cut(s)	133, 181, 324, 336, 735
Hpy166II	GTNNAC	5 cut(s)	707, 899, 1109, 1171, 1747
Hpy188III	TCNNGA	8 cut(s)	47, 56, 67, 317, 323, 590, 1185, 1761
Hpy8I	GTNNAC	5 cut(s)	707, 899, 1109, 1171, 1747
Hpy99I	CGWCG	4 cut(s)	26, 62, 452, 668
HpyAV	CCTTC	6 cut(s)	1111, 1132, 1540, 1568, 1653, 1693
HpyCH4III	ACNGT	6 cut(s)	80, 304, 581, 805, 820, 1469
HpyCH4IV	ACGT	1 cut(s)	60
HpyF10VI	GCNNNNNNNGC	6 cut(s)	18, 414, 486, 559, 1013, 1614
HpyF3I	CTNAG	5 cut(s)	117, 188, 1008, 1151, 1429
HpySE526I	ACGT	1 cut(s)	60
Hsp92I	GRCGYC	2 cut(s)	60, 108
Hsp92II	CATG	7 cut(s)	181, 203, 493, 702, 756, 951, 1764
HspAI	GCGC	3 cut(s)	108, 163, 478
KasI	GGCGCC	1 cut(s)	107
Ksp22I	TGATCA	3 cut(s)	673, 1375, 1419
LguI	GCTCTTC	2 cut(s)	1245, 1684
LmnI	GCTCC	4 cut(s)	193, 766, 926, 1525
Lsp1109I	GCAGC	3 cut(s)	860, 1330, 1333
LweI	GCATC	5 cut(s)	322, 562, 1401, 1559, 1664
MaeI	CTAG	4 cut(s)	381, 539, 1595, 1695
MaeII	ACGT	1 cut(s)	60
MaeIII	GTNAC	4 cut(s)	298, 845, 1091, 1435
MboII	GAAGA	9 cut(s)	77, 86, 383, 578, 617, 874, 1001, 1262, 1671
MflI	RGATCY	2 cut(s)	1024, 1751
MhlI	GDGCHC	3 cut(s)	198, 632, 1493
MluCI	AATT	7 cut(s)	340, 572, 710, 808, 1125, 1300, 1346
MluI	ACGCGT	1 cut(s)	661
Mly113I	GGCGCC	1 cut(s)	108
MlyI	GAGTC	4 cut(s)	44, 602, 1173, 1373
MmeI	TCCRAC	1 cut(s)	413
MseI	TTAA	6 cut(s)	143, 621, 758, 807, 1080, 1260
MslI	CAYNNNNRTG	2 cut(s)	352, 972
MspI	CCGG	2 cut(s)	1033, 1054
MspR9I	CCNGG	1 cut(s)	205
Mva1269I	GAATGC	1 cut(s)	658
MvaI	CCWGG	1 cut(s)	205
MvnI	CGCG	1 cut(s)	663
MwoI	GCNNNNNNNGC	6 cut(s)	18, 414, 486, 559, 1013, 1614
NarI	GGCGCC	1 cut(s)	108
NlaIII	CATG	7 cut(s)	181, 203, 493, 702, 756, 951, 1764
NlaIV	GGNNCC	2 cut(s)	109, 629
NmeAIII	GCCGAG	1 cut(s)	812
NmuCI	GTSAC	1 cut(s)	845
NsbI	TGCGCA	1 cut(s)	164
NspI	RCATGY	1 cut(s)	181
NspV	TTCGAA	1 cut(s)	1145
OliI	CACNNNNGTG	1 cut(s)	352
PagI	TCATGA	1 cut(s)	1760
PaqCI	CACCTGC	1 cut(s)	284
PciSI	GCTCTTC	2 cut(s)	1245, 1684
PcsI	WCGNNNNNNNCGW	1 cut(s)	63
PctI	GAATGC	1 cut(s)	658
PfeI	GAWTC	7 cut(s)	94, 134, 794, 1073, 1142, 1147, 1757
PinAI	ACCGGT	2 cut(s)	1032, 1053
PkrI	GCNGC	4 cut(s)	875, 1320, 1323, 1610
PleI	GAGTC	4 cut(s)	44, 601, 1173, 1372
PluTI	GGCGCC	1 cut(s)	111
PpsI	GAGTC	4 cut(s)	44, 601, 1173, 1372
Psp6I	CCWGG	1 cut(s)	203
PspFI	CCCAGC	2 cut(s)	228, 558
PspGI	CCWGG	1 cut(s)	203
PspN4I	GGNNCC	2 cut(s)	109, 629
PspPI	GGNCC	2 cut(s)	774, 1312
PsuI	RGATCY	2 cut(s)	1024, 1751
RsaI	GTAC	5 cut(s)	32, 378, 983, 1058, 1223
RsaNI	GTAC	5 cut(s)	31, 377, 982, 1057, 1222
RseI	CAYNNNNRTG	2 cut(s)	352, 972
SapI	GCTCTTC	2 cut(s)	1245, 1684
SaqAI	TTAA	6 cut(s)	143, 621, 758, 807, 1080, 1260
SatI	GCNGC	4 cut(s)	874, 1319, 1322, 1609
Sau96I	GGNCC	2 cut(s)	774, 1312
ScaI	AGTACT	1 cut(s)	32
SchI	GAGTC	4 cut(s)	44, 602, 1173, 1373
ScrFI	CCNGG	1 cut(s)	205
SduI	GDGCHC	3 cut(s)	198, 632, 1493
SfaNI	GCATC	5 cut(s)	322, 562, 1401, 1559, 1664
SfoI	GGCGCC	1 cut(s)	109
SfuI	TTCGAA	1 cut(s)	1145
SinI	GGWCC	1 cut(s)	1312
SmiMI	CAYNNNNRTG	2 cut(s)	352, 972
SmlI	CTYRAG	2 cut(s)	590, 1328
SmoI	CTYRAG	2 cut(s)	590, 1328
Sse9I	AATT	7 cut(s)	340, 572, 710, 808, 1125, 1300, 1346
SsiI	CCGC	4 cut(s)	408, 1021, 1608, 1617
SspDI	GGCGCC	1 cut(s)	107
SspMI	CTAG	4 cut(s)	381, 539, 1595, 1695
StyD4I	CCNGG	1 cut(s)	203
StyI	CCWWGG	1 cut(s)	102
TaaI	ACNGT	6 cut(s)	80, 304, 581, 805, 820, 1469
TaiI	ACGT	1 cut(s)	63
TaqI	TCGA	7 cut(s)	57, 66, 237, 666, 937, 1145, 1625
TasI	AATT	7 cut(s)	340, 572, 710, 808, 1125, 1300, 1346
TatI	WGTACW	1 cut(s)	30
TauI	GCSGC	1 cut(s)	1611
TfiI	GAWTC	7 cut(s)	94, 134, 794, 1073, 1142, 1147, 1757
Tru1I	TTAA	6 cut(s)	143, 621, 758, 807, 1080, 1260
Tru9I	TTAA	6 cut(s)	143, 621, 758, 807, 1080, 1260
TscAI	CASTG	2 cut(s)	95, 258
TseFI	GTSAC	1 cut(s)	845
TseI	GCWGC	3 cut(s)	873, 1318, 1321
Tsp45I	GTSAC	1 cut(s)	845
TspDTI	ATGAA	9 cut(s)	209, 534, 687, 741, 807, 812, 1203, 1407, 1749
TspRI	CASTG	2 cut(s)	95, 258
VpaK11BI	GGWCC	1 cut(s)	1312
XapI	RAATTY	2 cut(s)	572, 1300
XceI	RCATGY	1 cut(s)	181
XmiI	GTMKAC	2 cut(s)	706, 1108
XspI	CTAG	4 cut(s)	381, 539, 1595, 1695
ZraI	GACGTC	1 cut(s)	61
ZrmI	AGTACT	1 cut(s)	32

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.