Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0001183

Physical Location & Seq

Genomic Coordinates Reverse (-)

17341904 .. 17346347

Gene Structure 4444 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G010090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1491 bp

ATGGAGGACGATTGCCTGGGCAGCGATGAGGAGTTCTATACCTCCGATCAGGAAGACGATTACTCTATCGAAGGCCTTGAGGAGTCCATCGATGGCCTTGAAAACGATGACTCTGATACTCCCTGGATTCCCCCTAAGGTGATGGACTTGCTATTTCTGAGGGAGCACCATGCCCGAACTTTACTCATCCATCACCGGTGGGATGTTGAGAAGCTTTTTGCAGTGCTTGTAGAGAAGGGAAGAGCTTTCTTGTTTGCAGAAGCAGGTGTATCCGTAGTTGAACATCAAGATAGTGAACCACTGCTGCCTTCTTCCACAATAATGTGTGCTATTTGTATAGAGGATGTACCTAGTAATGAGGCAACTAAAATGGACTGTGGACATTGCTTTTGCAACGGCTGTTGGACGGAGCATTTTGTTGTGAAGATAAATGATGGGCAAAGTAAGCGCATTAGGTGCATGGCTCACAAATGTAATGCCATTTGTGATGAAGCCGTTGTTAGAAATCTAGTTAGCAAGAGCCACCCCAATCTTGCAGAGAAATTTGATCGGTTTCTTCTAGAGTCATACATTGAGGATAATAAAAGGGTTAAGTGGTGCCCAAGCACTCCTCATTGTGGAAATGCAATAAGAGTGGAGGATGATGAATTTTGTGAGATTGAATGTTCTTGCGGTCTTCAGTTTTGTTTTCGTTGTTCATCACAAGCCCACTCACCTTGTTCATGTTTGATGTGGGAGCTTTGGGCCAAGAAATGCCGAGATGAATCTGAGACAGTTAATTGGATCACAGTCCATACTAAACCTTGTCCTAAGTGTCACAAACCTGTAGAGAAGAATGGTGGCTGCAACCTTGTGAGTTGTATCTGTGGGCAAGCATTTTGTTGGCTTTGTGGTGGAGCTACTGGCCGAGACCATACATGGTCAAGTATTGCAGGTCATAGCTGTGGGCGATACAAAGAAGACAAAGAGAAAAACGCTGAGCGGGCAAAGCGAGATCTTTATCGGTATATGCACTATCACAACCGTTATAAAGCTCATACTGATTCAATCAAGCTTGAAAGTAAGTTGAAGGAGACTATACAAGAGAAGGTCAAGGCGGGTTTTCTTTCATATTCATATCCTTTTGCATTTTATATGTTCGGTGAGGAGCTGTTTAAGGATCAGATGACAAAGGAGGAAAGGGAAATAAAACAAAATTTGTTTGAGGACCAGCAGCAGCAGCTTGAGGAAAATGTTGAAAAACTGTCCAAGTTTTTGGAGGAGCCATTTGATAATTATGACGAGGATAAAGTTATGGAAGTAAGGATGCAAGTGATCAATCTCTCAGTAGTCACAGACAAACTCTGTCAGAAAATGTATGATTGTATTGAGAATGATTTATTGGGTTCTGTGCAACTCGGTATCCACCACAATATAGCTCCTTACAGGTCAAAGGGCATAGAGAAGGCATCAGAACTCCATTGTGGAACAAATGGTAAGTTGATTCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR

Protein Analysis

496

Amino Acids

57.08

Weight (kDa)

5.28

Isoelectric Point (pI)

53.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBR	PF01485	180 - 242	5.9e-14	IBR domain, a half RING-finger domain
IBR_2	PF22605	262 - 304	1.6e-07	IBR domain
IBR_1	PF22191	265 - 299	3.9e-06	IBR domain
Rcat_RNF216	PF26200	266 - 335	1.5e-06	RNF216 Rcat domain
Ariadne	PF19422	334 - 365	1.6e-13	Ariadne domain
Ariadne	PF19422	369 - 492	4.3e-72	Ariadne domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001183)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16090 AT2G16090 AT2G16090 AT2G16090 AT2G16090 AT4G34370
fragaria_vesca	FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g40440 FvH4_2g40440
malus_domestica	MD00G1039300.v1.1 MD05G1071700.v1.1 MD08G1037700.v1.1 MD10G1083500.v1.1
prunus_persica	Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.8G106500_v2.0.a1 Prupe.8G106500_v2.0.a1 Prupe.8G106500_v2.0.a1
pyrus_communis	pycom05g06180 pycom08g03000 pycom10g06560 pycom15g02930
rosa_chinensis	RchiOBHm_Chr6g0262251 RchiOBHm_Chr6g0300291
rosa_laevigata	RLG00000011350 RLG00000014443
rosa_multiflora	Rmu_sc0001670.1_g000025 Rmu_sc0002510.1_g000028
rosa_roxburghii	Rroxscaffold_7G00167920 Rroxscaffold_7G00207940
rosa_rugosa	Rorug05G0595800 Rorug05G0595800 Rorug05G0595900 Rorug05G0595900
rosa_samantha	Rh6AG116000 Rh6AG407300 Rh6BG110300 Rh6BG414900 Rh6CG107800 Rh6CG422200 Rh6DG098200 Rh6DG407900
rosa_wichuraiana	Rw0G017080 Rw6G010090 Rw6G035620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1029
AarI	CACCTGC	1 cut(s)	254
Acc36I	ACCTGC	2 cut(s)	254, 923
AccB1I	GGYRCC	1 cut(s)	597
AccBSI	CCGCTC	1 cut(s)	982
AciI	CCGC	3 cut(s)	672, 982, 1097
AclWI	GGATC	2 cut(s)	791, 1167
AcoI	YGGCCR	1 cut(s)	904
AcsI	RAATTY	3 cut(s)	542, 647, 1195
AcuI	CTGAAG	1 cut(s)	662
AfaI	GTAC	1 cut(s)	348
AfiI	CCNNNNNNNGG	1 cut(s)	617
AgeI	ACCGGT	1 cut(s)	195
AgsI	TTSAA	7 cut(s)	101, 281, 662, 1047, 1058, 1069, 1238
AjnI	CCWGG	2 cut(s)	15, 122
AjuI	GAANNNNNNNTTGG	2 cut(s)	1364, 1396
Alw21I	GWGCWC	1 cut(s)	168
Alw26I	GTCTC	3 cut(s)	764, 903, 1067
AlwI	GGATC	2 cut(s)	791, 1167
AoxI	GGCC	4 cut(s)	73, 94, 744, 904
ApeKI	GCWGC	6 cut(s)	21, 304, 843, 1213, 1216, 1219
ApoI	RAATTY	3 cut(s)	542, 647, 1195
ArsI	GACNNNNNNTTYG	2 cut(s)	372, 404
AsiGI	ACCGGT	1 cut(s)	195
AspLEI	GCGC	1 cut(s)	450
AspS9I	GGNCC	2 cut(s)	744, 1207
AsuHPI	GGTGA	4 cut(s)	151, 185, 705, 1154
AvaII	GGWCC	1 cut(s)	1207
AxyI	CCTNAGG	1 cut(s)	135
BaeGI	GKGCMC	1 cut(s)	602
BanI	GGYRCC	1 cut(s)	597
BbsI	GAAGAC	3 cut(s)	60, 668, 966
Bbv12I	GWGCWC	1 cut(s)	168
BbvI	GCAGC	6 cut(s)	33, 291, 830, 1225, 1228, 1231
BccI	CCATC	5 cut(s)	86, 95, 136, 198, 428
BceAI	ACGGC	2 cut(s)	412, 479
BciT130I	CCWGG	2 cut(s)	17, 124
BciVI	GTATCC	2 cut(s)	280, 1412
BclI	TGATCA	1 cut(s)	1314
BcoDI	GTCTC	3 cut(s)	764, 903, 1067
BfaI	CTAG	3 cut(s)	351, 509, 560
BfmI	CTRYAG	1 cut(s)	825
BfuAI	ACCTGC	2 cut(s)	254, 923
BfuI	GTATCC	2 cut(s)	280, 1412
BglII	AGATCT	1 cut(s)	994
BisI	GCNGC	6 cut(s)	22, 305, 844, 1214, 1217, 1220
BlpI	GCTNAGC	1 cut(s)	978
BlsI	GCNGC	6 cut(s)	23, 306, 845, 1215, 1218, 1221
Bme1390I	CCNGG	2 cut(s)	17, 124
Bme18I	GGWCC	1 cut(s)	1207
BmgT120I	GGNCC	2 cut(s)	744, 1207
BmiI	GGNNCC	2 cut(s)	599, 1263
BmrFI	CCNGG	2 cut(s)	17, 124
BmsI	GCATC	2 cut(s)	1296, 1457
BpiI	GAAGAC	3 cut(s)	60, 668, 966
Bpu1102I	GCTNAGC	1 cut(s)	978
BpuEI	CTTGAG	2 cut(s)	98, 1244
Bsa29I	ATCGAT	1 cut(s)	90
BsaBI	GATNNNNATC	1 cut(s)	999
BsaI	GGTCTC	1 cut(s)	903
BsaJI	CCNNGG	2 cut(s)	16, 122
BsaWI	WCCGGW	1 cut(s)	195
Bsc4I	CCNNNNNNNGG	1 cut(s)	617
Bse118I	RCCGGY	1 cut(s)	195
Bse1I	ACTGG	1 cut(s)	907
Bse21I	CCTNAGG	1 cut(s)	135
Bse3DI	GCAATG	1 cut(s)	382
Bse8I	GATNNNNATC	1 cut(s)	999
BseBI	CCWGG	2 cut(s)	17, 124
BseCI	ATCGAT	1 cut(s)	90
BseDI	CCNNGG	2 cut(s)	16, 122
BseGI	GGATG	5 cut(s)	186, 208, 349, 646, 1311
BseJI	GATNNNNATC	1 cut(s)	999
BseLI	CCNNNNNNNGG	1 cut(s)	617
BseMI	GCAATG	1 cut(s)	382
BseMII	CTCAG	4 cut(s)	149, 759, 969, 1338
BseNI	ACTGG	1 cut(s)	907
BseRI	GAGGAG	5 cut(s)	44, 95, 600, 1160, 1274
BseSI	GKGCMC	1 cut(s)	602
BseXI	GCAGC	6 cut(s)	33, 291, 830, 1225, 1228, 1231
BshFI	GGCC	4 cut(s)	75, 96, 746, 906
BshNI	GGYRCC	1 cut(s)	597
BshTI	ACCGGT	1 cut(s)	195
BshVI	ATCGAT	1 cut(s)	90
BsiHKAI	GWGCWC	1 cut(s)	168
BsiSI	CCGG	1 cut(s)	196
BslI	CCNNNNNNNGG	1 cut(s)	617
BsmAI	GTCTC	3 cut(s)	764, 903, 1067
BsnI	GGCC	4 cut(s)	75, 96, 746, 906
Bso31I	GGTCTC	1 cut(s)	903
Bsp1286I	GDGCHC	2 cut(s)	168, 602
Bsp143I	GATC	6 cut(s)	46, 547, 783, 994, 1159, 1314
Bsp1720I	GCTNAGC	1 cut(s)	978
BspACI	CCGC	3 cut(s)	672, 982, 1097
BspANI	GGCC	4 cut(s)	75, 96, 746, 906
BspCNI	CTCAG	4 cut(s)	150, 760, 970, 1337
BspDI	ATCGAT	1 cut(s)	90
BspLI	GGNNCC	2 cut(s)	599, 1263
BspMI	ACCTGC	2 cut(s)	254, 923
BspPI	GGATC	2 cut(s)	791, 1167
BspQI	GCTCTTC	1 cut(s)	235
BspT107I	GGYRCC	1 cut(s)	597
BspTNI	GGTCTC	1 cut(s)	903
BsrBI	CCGCTC	1 cut(s)	982
BsrDI	GCAATG	1 cut(s)	382
BsrFI	RCCGGY	1 cut(s)	195
BsrI	ACTGG	1 cut(s)	907
BssAI	RCCGGY	1 cut(s)	195
BssECI	CCNNGG	2 cut(s)	16, 122
BssMI	GATC	6 cut(s)	46, 547, 783, 994, 1159, 1314
Bst2UI	CCWGG	2 cut(s)	17, 124
Bst4CI	ACNGT	5 cut(s)	377, 775, 790, 1025, 1245
Bst6I	CTCTTC	1 cut(s)	235
BstAPI	GCANNNNNTGC	1 cut(s)	456
BstC8I	GCNNGC	2 cut(s)	873, 984
BstDEI	CTNAG	6 cut(s)	135, 158, 768, 810, 978, 1324
BstF5I	GGATG	5 cut(s)	186, 208, 349, 646, 1311
BstHHI	GCGC	1 cut(s)	450
BstKTI	GATC	6 cut(s)	49, 550, 786, 997, 1162, 1317
BstMAI	GTCTC	3 cut(s)	764, 903, 1067
BstMBI	GATC	6 cut(s)	46, 547, 783, 994, 1159, 1314
BstMWI	GCNNNNNNNGC	6 cut(s)	21, 445, 456, 983, 988, 1219
BstNI	CCWGG	2 cut(s)	17, 124
BstSCI	CCNGG	2 cut(s)	15, 122
BstSFI	CTRYAG	1 cut(s)	825
BstSLI	GKGCMC	1 cut(s)	602
BstV1I	GCAGC	6 cut(s)	33, 291, 830, 1225, 1228, 1231
BstV2I	GAAGAC	3 cut(s)	60, 668, 966
BstX2I	RGATCY	1 cut(s)	994
BstXI	CCANNNNNNTGG	1 cut(s)	1255
BstYI	RGATCY	1 cut(s)	994
Bsu15I	ATCGAT	1 cut(s)	90
Bsu36I	CCTNAGG	1 cut(s)	135
BsuI	GTATCC	2 cut(s)	280, 1412
BsuRI	GGCC	4 cut(s)	75, 96, 746, 906
BsuTUI	ATCGAT	1 cut(s)	90
BtgZI	GCGATG	1 cut(s)	39
BtsCI	GGATG	5 cut(s)	186, 208, 349, 646, 1311
BtsI	GCAGTG	2 cut(s)	228, 299
BtsIMutI	CAGTG	2 cut(s)	228, 299
BveI	ACCTGC	2 cut(s)	254, 923
Cac8I	GCNNGC	2 cut(s)	873, 984
CfoI	GCGC	1 cut(s)	450
Cfr10I	RCCGGY	1 cut(s)	195
Cfr13I	GGNCC	2 cut(s)	744, 1207
ClaI	ATCGAT	1 cut(s)	90
Csp6I	GTAC	1 cut(s)	347
CspAI	ACCGGT	1 cut(s)	195
CspCI	CAANNNNNGTGG	4 cut(s)	615, 650, 698, 733
CviAII	CATG	5 cut(s)	170, 460, 723, 918, 1488
CviQI	GTAC	1 cut(s)	347
DdeI	CTNAG	6 cut(s)	135, 158, 768, 810, 978, 1324
DpnI	GATC	6 cut(s)	48, 549, 785, 996, 1161, 1316
DpnII	GATC	6 cut(s)	46, 547, 783, 994, 1159, 1314
EaeI	YGGCCR	1 cut(s)	904
Eam1104I	CTCTTC	1 cut(s)	235
EarI	CTCTTC	1 cut(s)	235
Eco147I	AGGCCT	1 cut(s)	75
Eco31I	GGTCTC	1 cut(s)	903
Eco47I	GGWCC	1 cut(s)	1207
Eco57I	CTGAAG	1 cut(s)	662
Eco81I	CCTNAGG	1 cut(s)	135
EcoRII	CCWGG	2 cut(s)	15, 122
FaeI	CATG	5 cut(s)	173, 463, 726, 921, 1491
FatI	CATG	5 cut(s)	169, 459, 722, 917, 1487
FauI	CCCGC	2 cut(s)	975, 1090
FbaI	TGATCA	1 cut(s)	1314
Fnu4HI	GCNGC	6 cut(s)	22, 305, 844, 1214, 1217, 1220
FokI	GGATG	5 cut(s)	173, 215, 356, 653, 1318
Fsp4HI	GCNGC	6 cut(s)	22, 305, 844, 1214, 1217, 1220
FspBI	CTAG	3 cut(s)	351, 509, 560
GlaI	GCGC	1 cut(s)	449
GluI	GCNGC	6 cut(s)	22, 305, 844, 1214, 1217, 1220
HaeIII	GGCC	4 cut(s)	75, 96, 746, 906
HapII	CCGG	1 cut(s)	196
HhaI	GCGC	1 cut(s)	450
Hin1II	CATG	5 cut(s)	173, 463, 726, 921, 1491
Hin6I	GCGC	1 cut(s)	448
HinP1I	GCGC	1 cut(s)	448
HindIII	AAGCTT	2 cut(s)	212, 1052
HinfI	GANTC	7 cut(s)	83, 110, 127, 563, 764, 1043, 1483
HpaII	CCGG	1 cut(s)	196
HphI	GGTGA	4 cut(s)	151, 185, 705, 1154
Hpy166II	GTNNAC	2 cut(s)	296, 380
Hpy188I	TCNGA	7 cut(s)	46, 115, 159, 769, 1164, 1350, 1453
Hpy188III	TCNNGA	3 cut(s)	50, 287, 560
Hpy8I	GTNNAC	2 cut(s)	296, 380
HpyAV	CCTTC	6 cut(s)	65, 229, 318, 1063, 1081, 1438
HpyCH4III	ACNGT	5 cut(s)	377, 775, 790, 1025, 1245
HpyF10VI	GCNNNNNNNGC	6 cut(s)	21, 445, 456, 983, 988, 1219
HpyF3I	CTNAG	6 cut(s)	135, 158, 768, 810, 978, 1324
Hsp92II	CATG	5 cut(s)	173, 463, 726, 921, 1491
HspAI	GCGC	1 cut(s)	448
Ksp22I	TGATCA	1 cut(s)	1314
Kzo9I	GATC	6 cut(s)	46, 547, 783, 994, 1159, 1314
LguI	GCTCTTC	1 cut(s)	235
LmnI	GCTCC	7 cut(s)	163, 409, 736, 896, 1147, 1261, 1423
Lsp1109I	GCAGC	6 cut(s)	33, 291, 830, 1225, 1228, 1231
LweI	GCATC	2 cut(s)	1296, 1457
MaeI	CTAG	3 cut(s)	351, 509, 560
MaeIII	GTNAC	2 cut(s)	815, 1330
MalI	GATC	6 cut(s)	48, 549, 785, 996, 1161, 1316
MbiI	CCGCTC	1 cut(s)	982
MboI	GATC	6 cut(s)	46, 547, 783, 994, 1159, 1314
MboII	GAAGA	8 cut(s)	65, 252, 303, 436, 548, 668, 844, 971
MflI	RGATCY	1 cut(s)	994
MhlI	GDGCHC	2 cut(s)	168, 602
MluCI	AATT	5 cut(s)	542, 647, 778, 1195, 1273
MlyI	GAGTC	3 cut(s)	92, 104, 572
MmeI	TCCRAC	1 cut(s)	383
MseI	TTAA	3 cut(s)	591, 777, 1155
MslI	CAYNNNNRTG	2 cut(s)	320, 942
MspI	CCGG	1 cut(s)	196
MspR9I	CCNGG	2 cut(s)	17, 124
MvaI	CCWGG	2 cut(s)	17, 124
MwoI	GCNNNNNNNGC	6 cut(s)	21, 445, 456, 983, 988, 1219
NdeII	GATC	6 cut(s)	46, 547, 783, 994, 1159, 1314
NlaIII	CATG	5 cut(s)	173, 463, 726, 921, 1491
NlaIV	GGNNCC	2 cut(s)	599, 1263
NmeAIII	GCCGAG	2 cut(s)	782, 932
NmuCI	GTSAC	2 cut(s)	815, 1330
PaqCI	CACCTGC	1 cut(s)	254
PceI	AGGCCT	1 cut(s)	75
PciSI	GCTCTTC	1 cut(s)	235
PfeI	GAWTC	4 cut(s)	127, 764, 1043, 1483
PinAI	ACCGGT	1 cut(s)	195
PkrI	GCNGC	6 cut(s)	23, 306, 845, 1215, 1218, 1221
PleI	GAGTC	3 cut(s)	91, 104, 571
PpsI	GAGTC	3 cut(s)	91, 104, 571
PsiI	TTATAA	1 cut(s)	1029
Psp6I	CCWGG	2 cut(s)	15, 122
PspGI	CCWGG	2 cut(s)	15, 122
PspN4I	GGNNCC	2 cut(s)	599, 1263
PspPI	GGNCC	2 cut(s)	744, 1207
PsuI	RGATCY	1 cut(s)	994
RsaI	GTAC	1 cut(s)	348
RsaNI	GTAC	1 cut(s)	347
RseI	CAYNNNNRTG	2 cut(s)	320, 942
SapI	GCTCTTC	1 cut(s)	235
SaqAI	TTAA	3 cut(s)	591, 777, 1155
SatI	GCNGC	6 cut(s)	22, 305, 844, 1214, 1217, 1220
Sau3AI	GATC	6 cut(s)	46, 547, 783, 994, 1159, 1314
Sau96I	GGNCC	2 cut(s)	744, 1207
SchI	GAGTC	3 cut(s)	92, 104, 572
ScrFI	CCNGG	2 cut(s)	17, 124
SduI	GDGCHC	2 cut(s)	168, 602
SfaNI	GCATC	2 cut(s)	1296, 1457
SfcI	CTRYAG	1 cut(s)	825
SgrAI	CRCCGGYG	1 cut(s)	195
SinI	GGWCC	1 cut(s)	1207
SmiMI	CAYNNNNRTG	2 cut(s)	320, 942
SmlI	CTYRAG	2 cut(s)	77, 1223
SmoI	CTYRAG	2 cut(s)	77, 1223
Sse9I	AATT	5 cut(s)	542, 647, 778, 1195, 1273
SseBI	AGGCCT	1 cut(s)	75
SsiI	CCGC	3 cut(s)	672, 982, 1097
SspMI	CTAG	3 cut(s)	351, 509, 560
StuI	AGGCCT	1 cut(s)	75
StyD4I	CCNGG	2 cut(s)	15, 122
TaaI	ACNGT	5 cut(s)	377, 775, 790, 1025, 1245
TaqI	TCGA	2 cut(s)	69, 90
TasI	AATT	5 cut(s)	542, 647, 778, 1195, 1273
TfiI	GAWTC	4 cut(s)	127, 764, 1043, 1483
Tru1I	TTAA	3 cut(s)	591, 777, 1155
Tru9I	TTAA	3 cut(s)	591, 777, 1155
TscAI	CASTG	2 cut(s)	228, 306
TseFI	GTSAC	2 cut(s)	815, 1330
TseI	GCWGC	6 cut(s)	21, 304, 843, 1213, 1216, 1219
Tsp45I	GTSAC	2 cut(s)	815, 1330
TspDTI	ATGAA	7 cut(s)	504, 660, 687, 711, 777, 1098, 1104
TspGWI	ACGGA	2 cut(s)	262, 422
TspRI	CASTG	2 cut(s)	228, 306
VpaK11BI	GGWCC	1 cut(s)	1207
XapI	RAATTY	3 cut(s)	542, 647, 1195
XbaI	TCTAGA	1 cut(s)	559
XspI	CTAG	3 cut(s)	351, 509, 560

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.