Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0001183

Physical Location & Seq

Genomic Coordinates Forward (+)

8789260 .. 8792569

Gene Structure 3310 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011350

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGGAGGACGACTATTATGTGAGCAGCGAGGAAGAAGGCTATTACGATGACGAGGAGGATAATGATGATCCTGAGAATTTGGAGGAGGAGATGATGGCGTACGTTGAGAGTGAGACTCCAAAGTGTGAGGTGTCATCGACCAAGGTAATCTCAAAAGAATCTCTCTTGGCTGCACAGAGAGGCGATGTGCAGAGGGTAATGGATGTGCTGTCGCTGAAAGAGTACCATGCCCGAACCTTGCTCATCCATTATCGTTGGGATGTCGACAAGGTGCTTGCTGTGTATGTAGAGAGGGGGAAAGAGTTACTATACGAAAAGGCTGGTGTGACTATGGCGGAGCATGATGACACATCACAGCTTTCATCTGAGGTTATGTGTGATATTTGCATGGATGAAATTCCGGCTAATGAGGTCACAGTCATGGATTGCAATCACGTTTTTTGTAACGAATGTTGGACAGAGCATTTTATTGTGAAAATAAACGAGGGTCAAAGTAGGCGCATTAAATGCATGGCACACAAGTGCAATGCTGTTTGTGACGAAGCAATAATCAGAAACCTGGTCAGTGCAAGGGATCCTAATCTGGCCGAGAAGTTTGATCGTTTTCTTCTGGAATCATATATTGAGGATAATAGAAAGGTGAAGTGGTGCCCGAGTATTCCTCATTGTGGAAATGCTATACGTATTGAGGAAGATGAGTTAATCGAGGTTGAATGTGCATGTGGAAAGCAATTCTGTTTTAGTTGCTTATGTGAAGCACACTCTCCTTGTTCATGCCAAATGTGGGACCACTGGTTGAAGAAGTGCGTAGATGAATCAGAGACTGTTAATTACATTTCAGTCAACACAAAGCATTGCCCAAAATGTAACAAGCTGGTTGAAAAGAATGGAGGATGCAATCTAGTTACCTGTATCTGTGGACAACCATTTTGCTGGCTCTGTGGTGCCCCAACTGGTTCGGATCATACATGGGATTCCATTGCAGGTCATGAGTGTGGACGATTCAAAGAAGACGAGGAGACGGACCTTGAGCAAACCAAGAAGGACCTATTTCGTTACACTCACTACTTCAACCGTTTTCAAGCTCATAAAGATTCTCTTAAGCTTGAAGCTGCACTGAAGAAAACCGTACAAAGAAAAATAACATATTTGGAAGAAAACTTATCGTCATCGAAAGATTATAGCTGGACAACTGATGCACTTAACAGACTCTTTAGATCAAGGCGAATTATTGCATATTCCTACCCATTTGCATATCACATGTTTGGTGATCTTTTCAAAAAAGAGATGACATTAGAACAAAGGACGATAAAACAGAACCTGTTTGAGGACCAGCAGCAGCAGCTTGAGGCCAGCATGGAGAAGCTTTCTATGTTTACAGAGGAACCTTTTGACCATTATTCGGAGGAGAAACTTCACGATTTAAAATTGAGGATGATCAATCTTTCGACGCTTGTTGATAAGCTCTGCCTGAAATTGTTTGAATGCATTGAATATGATTTGCTGGGCCAACTTCAATTTTCATTTGTCGGGATGCTGAAAATGACTGGCACTAATGAAGAGAACTCGGAGATAAACAAAAGTTCTGCTACTGATAAATGTAATTACAGAATCTTGTCCTCAATCGACTTTGAGAGTGAGTTGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR zf-C3HC4

Protein Analysis

550

Amino Acids

63.87

Weight (kDa)

4.89

Isoelectric Point (pI)

50.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_ARI1	PF21235	58 - 97	1.5e-08	E3 ubiquitin-protein ligase ARIH1, UBA-like domain
IBR	PF01485	197 - 259	4.6e-14	IBR domain, a half RING-finger domain
IBR	PF01485	278 - 318	2.6e-06	IBR domain, a half RING-finger domain
IBR_1	PF22191	282 - 317	6.4e-07	IBR domain
Rcat_RNF216	PF26200	283 - 350	3.7e-07	RNF216 Rcat domain
Ariadne	PF19422	352 - 510	8.6e-72	Ariadne domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001183)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16090 AT2G16090 AT2G16090 AT2G16090 AT2G16090 AT4G34370
fragaria_vesca	FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g07840 FvH4_2g40440 FvH4_2g40440
malus_domestica	MD00G1039300.v1.1 MD05G1071700.v1.1 MD08G1037700.v1.1 MD10G1083500.v1.1
prunus_persica	Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.1G384900_v2.0.a1 Prupe.8G106500_v2.0.a1 Prupe.8G106500_v2.0.a1 Prupe.8G106500_v2.0.a1
pyrus_communis	pycom05g06180 pycom08g03000 pycom10g06560 pycom15g02930
rosa_chinensis	RchiOBHm_Chr6g0262251 RchiOBHm_Chr6g0300291
rosa_laevigata	RLG00000011350 RLG00000014443
rosa_multiflora	Rmu_sc0001670.1_g000025 Rmu_sc0002510.1_g000028
rosa_roxburghii	Rroxscaffold_7G00167920 Rroxscaffold_7G00207940
rosa_rugosa	Rorug05G0595800 Rorug05G0595800 Rorug05G0595900 Rorug05G0595900
rosa_samantha	Rh6AG116000 Rh6AG407300 Rh6BG110300 Rh6BG414900 Rh6CG107800 Rh6CG422200 Rh6DG098200 Rh6DG407900
rosa_wichuraiana	Rw0G017080 Rw6G010090 Rw6G035620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	974
AccB1I	GGYRCC	2 cut(s)	648, 944
AccI	GTMKAC	1 cut(s)	264
AciI	CCGC	1 cut(s)	335
AclWI	GGATC	4 cut(s)	62, 569, 582, 969
AcoI	YGGCCR	1 cut(s)	585
AcsI	RAATTY	2 cut(s)	76, 396
AcuI	CTGAAG	1 cut(s)	1139
AfaI	GTAC	3 cut(s)	101, 224, 1131
AfiI	CCNNNNNNNGG	4 cut(s)	668, 784, 1327, 1402
AflII	CTTAAG	1 cut(s)	1100
AflIII	ACRYGT	1 cut(s)	1260
AjnI	CCWGG	1 cut(s)	558
AleI	CACNNNNGTG	1 cut(s)	520
AluBI	AGCT	9 cut(s)	358, 874, 1085, 1105, 1112, 1185, 1345, 1366, 1465
AluI	AGCT	9 cut(s)	358, 874, 1085, 1105, 1112, 1185, 1345, 1366, 1465
Alw26I	GTCTC	3 cut(s)	107, 815, 1013
AlwI	GGATC	4 cut(s)	62, 569, 582, 969
AlwNI	CAGNNNCTG	2 cut(s)	824, 1321
Ama87I	CYCGRG	1 cut(s)	652
AoxI	GGCC	3 cut(s)	585, 1350, 1507
ApeKI	GCWGC	6 cut(s)	24, 170, 1112, 1336, 1339, 1342
ApoI	RAATTY	2 cut(s)	76, 396
ArsI	GACNNNNNNTTYG	2 cut(s)	912, 944
AspLEI	GCGC	1 cut(s)	501
AspS9I	GGNCC	5 cut(s)	787, 1024, 1045, 1330, 1507
AsuHPI	GGTGA	2 cut(s)	652, 1280
AvaI	CYCGRG	1 cut(s)	652
AvaII	GGWCC	4 cut(s)	787, 1024, 1045, 1330
BaeGI	GKGCMC	2 cut(s)	653, 949
BamHI	GGATCC	1 cut(s)	574
BanI	GGYRCC	2 cut(s)	648, 944
BbsI	GAAGAC	1 cut(s)	1017
BbvI	GCAGC	6 cut(s)	36, 157, 1099, 1348, 1351, 1354
BccI	CCATC	1 cut(s)	88
BciT130I	CCWGG	1 cut(s)	560
BclI	TGATCA	1 cut(s)	1437
BcoDI	GTCTC	3 cut(s)	107, 815, 1013
BfaI	CTAG	1 cut(s)	902
BfrI	CTTAAG	1 cut(s)	1100
BfuAI	ACCTGC	1 cut(s)	974
BisI	GCNGC	6 cut(s)	25, 171, 1113, 1337, 1340, 1343
BlsI	GCNGC	6 cut(s)	26, 172, 1114, 1338, 1341, 1344
Bme1390I	CCNGG	1 cut(s)	560
Bme18I	GGWCC	4 cut(s)	787, 1024, 1045, 1330
BmeT110I	CYCGRG	1 cut(s)	652
BmgT120I	GGNCC	5 cut(s)	787, 1024, 1045, 1330, 1507
BmiI	GGNNCC	5 cut(s)	576, 650, 788, 946, 1386
BmrFI	CCNGG	1 cut(s)	560
BmsI	GCATC	3 cut(s)	884, 1186, 1524
BpiI	GAAGAC	1 cut(s)	1017
BplI	GAGNNNNNCTC	4 cut(s)	100, 132, 646, 678
BpuEI	CTTGAG	2 cut(s)	1049, 1367
BsaAI	YACGTR	1 cut(s)	683
BsaBI	GATNNNNATC	2 cut(s)	429, 579
BsaJI	CCNNGG	1 cut(s)	141
Bsc4I	CCNNNNNNNGG	4 cut(s)	668, 784, 1327, 1402
Bse1I	ACTGG	3 cut(s)	797, 958, 1552
Bse3DI	GCAATG	3 cut(s)	532, 853, 978
Bse8I	GATNNNNATC	2 cut(s)	429, 579
BseBI	CCWGG	1 cut(s)	560
BseDI	CCNNGG	1 cut(s)	141
BseGI	GGATG	7 cut(s)	208, 243, 265, 397, 899, 1440, 1539
BseJI	GATNNNNATC	2 cut(s)	429, 579
BseLI	CCNNNNNNNGG	4 cut(s)	668, 784, 1327, 1402
BseMI	GCAATG	3 cut(s)	532, 853, 978
BseMII	CTCAG	2 cut(s)	63, 357
BseNI	ACTGG	3 cut(s)	797, 958, 1552
BseRI	GAGGAG	5 cut(s)	68, 98, 101, 1031, 1421
BseSI	GKGCMC	2 cut(s)	653, 949
BseXI	GCAGC	6 cut(s)	36, 157, 1099, 1348, 1351, 1354
BseYI	CCCAGC	1 cut(s)	1504
BsgI	GTGCAG	3 cut(s)	156, 209, 1098
BshFI	GGCC	3 cut(s)	587, 1352, 1509
BshNI	GGYRCC	2 cut(s)	648, 944
BsiHKCI	CYCGRG	1 cut(s)	652
BsiSI	CCGG	1 cut(s)	401
BsiWI	CGTACG	1 cut(s)	99
BslFI	GGGAC	1 cut(s)	800
BslI	CCNNNNNNNGG	4 cut(s)	668, 784, 1327, 1402
BsmAI	GTCTC	3 cut(s)	107, 815, 1013
BsmBI	CGTCTC	1 cut(s)	1013
BsmFI	GGGAC	1 cut(s)	800
BsmI	GAATGC	1 cut(s)	1490
BsnI	GGCC	3 cut(s)	587, 1352, 1509
BsoBI	CYCGRG	1 cut(s)	652
Bsp1286I	GDGCHC	2 cut(s)	653, 949
Bsp143I	GATC	7 cut(s)	67, 574, 598, 961, 1217, 1270, 1437
BspACI	CCGC	1 cut(s)	335
BspANI	GGCC	3 cut(s)	587, 1352, 1509
BspCNI	CTCAG	2 cut(s)	64, 358
BspHI	TCATGA	1 cut(s)	988
BspLI	GGNNCC	5 cut(s)	576, 650, 788, 946, 1386
BspMI	ACCTGC	1 cut(s)	974
BspPI	GGATC	4 cut(s)	62, 569, 582, 969
BspT107I	GGYRCC	2 cut(s)	648, 944
BspTI	CTTAAG	1 cut(s)	1100
BsrDI	GCAATG	3 cut(s)	532, 853, 978
BsrI	ACTGG	3 cut(s)	797, 958, 1552
BssECI	CCNNGG	1 cut(s)	141
BssMI	GATC	7 cut(s)	67, 574, 598, 961, 1217, 1270, 1437
BssT1I	CCWWGG	1 cut(s)	141
Bst2UI	CCWGG	1 cut(s)	560
Bst4CI	ACNGT	4 cut(s)	418, 826, 1076, 1129
Bst6I	CTCTTC	1 cut(s)	1554
BstAFI	CTTAAG	1 cut(s)	1100
BstAPI	GCANNNNNTGC	1 cut(s)	507
BstBAI	YACGTR	1 cut(s)	683
BstC8I	GCNNGC	3 cut(s)	276, 935, 1354
BstDEI	CTNAG	2 cut(s)	72, 366
BstENI	CCTNNNNNAGG	1 cut(s)	1325
BstF5I	GGATG	7 cut(s)	208, 243, 265, 397, 899, 1440, 1539
BstHHI	GCGC	1 cut(s)	501
BstKTI	GATC	7 cut(s)	70, 577, 601, 964, 1220, 1273, 1440
BstMAI	GTCTC	3 cut(s)	107, 815, 1013
BstMBI	GATC	7 cut(s)	67, 574, 598, 961, 1217, 1270, 1437
BstMWI	GCNNNNNNNGC	2 cut(s)	507, 1342
BstNI	CCWGG	1 cut(s)	560
BstNSI	RCATGY	2 cut(s)	723, 1264
BstSCI	CCNGG	1 cut(s)	558
BstSLI	GKGCMC	2 cut(s)	653, 949
BstSNI	TACGTA	1 cut(s)	683
BstV1I	GCAGC	6 cut(s)	36, 157, 1099, 1348, 1351, 1354
BstV2I	GAAGAC	1 cut(s)	1017
BstX2I	RGATCY	1 cut(s)	574
BstXI	CCANNNNNNTGG	1 cut(s)	933
BstYI	RGATCY	1 cut(s)	574
BsuRI	GGCC	3 cut(s)	587, 1352, 1509
BtgZI	GCGATG	1 cut(s)	198
BtsCI	GGATG	7 cut(s)	208, 243, 265, 397, 899, 1440, 1539
BtsIMutI	CAGTG	3 cut(s)	571, 790, 1115
BveI	ACCTGC	1 cut(s)	974
Cac8I	GCNNGC	3 cut(s)	276, 935, 1354
CaiI	CAGNNNCTG	2 cut(s)	824, 1321
CciI	TCATGA	1 cut(s)	988
CfoI	GCGC	1 cut(s)	501
Cfr13I	GGNCC	5 cut(s)	787, 1024, 1045, 1330, 1507
CseI	GACGC	1 cut(s)	1459
CsiI	ACCWGGT	1 cut(s)	558
Csp6I	GTAC	3 cut(s)	100, 223, 1130
CviQI	GTAC	3 cut(s)	100, 223, 1130
DdeI	CTNAG	2 cut(s)	72, 366
DpnI	GATC	7 cut(s)	69, 576, 600, 963, 1219, 1272, 1439
DpnII	GATC	7 cut(s)	67, 574, 598, 961, 1217, 1270, 1437
DraI	TTTAAA	1 cut(s)	1425
EaeI	YGGCCR	1 cut(s)	585
Eam1104I	CTCTTC	1 cut(s)	1554
EarI	CTCTTC	1 cut(s)	1554
EciI	GGCGGA	1 cut(s)	350
Eco105I	TACGTA	1 cut(s)	683
Eco130I	CCWWGG	1 cut(s)	141
Eco47I	GGWCC	4 cut(s)	787, 1024, 1045, 1330
Eco57I	CTGAAG	1 cut(s)	1139
Eco88I	CYCGRG	1 cut(s)	652
EcoNI	CCTNNNNNAGG	1 cut(s)	1325
EcoO109I	RGGNCCY	1 cut(s)	1045
EcoRII	CCWGG	1 cut(s)	558
EcoT14I	CCWWGG	1 cut(s)	141
EcoT22I	ATGCAT	2 cut(s)	512, 1490
ErhI	CCWWGG	1 cut(s)	141
Esp3I	CGTCTC	1 cut(s)	1013
FalI	AAGNNNNNCTT	2 cut(s)	1083, 1115
FaqI	GGGAC	1 cut(s)	800
FbaI	TGATCA	1 cut(s)	1437
FblI	GTMKAC	1 cut(s)	264
Fnu4HI	GCNGC	6 cut(s)	25, 171, 1113, 1337, 1340, 1343
FokI	GGATG	7 cut(s)	215, 230, 272, 404, 906, 1447, 1546
Fsp4HI	GCNGC	6 cut(s)	25, 171, 1113, 1337, 1340, 1343
FspBI	CTAG	1 cut(s)	902
GlaI	GCGC	1 cut(s)	500
GluI	GCNGC	6 cut(s)	25, 171, 1113, 1337, 1340, 1343
GsaI	CCCAGC	1 cut(s)	1508
HaeIII	GGCC	3 cut(s)	587, 1352, 1509
HapII	CCGG	1 cut(s)	401
HgaI	GACGC	1 cut(s)	1459
HhaI	GCGC	1 cut(s)	501
Hin6I	GCGC	1 cut(s)	499
HinP1I	GCGC	1 cut(s)	499
HincII	GTYRAC	2 cut(s)	265, 844
HindII	GTYRAC	2 cut(s)	265, 844
HindIII	AAGCTT	2 cut(s)	1103, 1364
HinfI	GANTC	9 cut(s)	115, 158, 614, 815, 974, 1002, 1094, 1209, 1611
HpaII	CCGG	1 cut(s)	401
HphI	GGTGA	2 cut(s)	652, 1280
Hpy166II	GTNNAC	5 cut(s)	265, 844, 920, 998, 1377
Hpy188I	TCNGA	6 cut(s)	367, 554, 820, 961, 1405, 1570
Hpy188III	TCNNGA	5 cut(s)	71, 611, 989, 1418, 1531
Hpy8I	GTNNAC	5 cut(s)	265, 844, 920, 998, 1377
Hpy99I	CGWCG	1 cut(s)	1453
HpyAV	CCTTC	2 cut(s)	29, 1036
HpyCH4III	ACNGT	4 cut(s)	418, 826, 1076, 1129
HpyCH4IV	ACGT	3 cut(s)	102, 435, 682
HpyF10VI	GCNNNNNNNGC	2 cut(s)	507, 1342
HpyF3I	CTNAG	2 cut(s)	72, 366
HpySE526I	ACGT	3 cut(s)	102, 435, 682
HspAI	GCGC	1 cut(s)	499
Ksp22I	TGATCA	1 cut(s)	1437
Kzo9I	GATC	7 cut(s)	67, 574, 598, 961, 1217, 1270, 1437
LmnI	GCTCC	1 cut(s)	337
Lsp1109I	GCAGC	6 cut(s)	36, 157, 1099, 1348, 1351, 1354
LweI	GCATC	3 cut(s)	884, 1186, 1524
MabI	ACCWGGT	1 cut(s)	558
MaeI	CTAG	1 cut(s)	902
MaeII	ACGT	3 cut(s)	102, 435, 682
MaeIII	GTNAC	8 cut(s)	303, 325, 412, 443, 536, 866, 904, 1055
MalI	GATC	7 cut(s)	69, 576, 600, 963, 1219, 1272, 1439
MboI	GATC	7 cut(s)	67, 574, 598, 961, 1217, 1270, 1437
MboII	GAAGA	8 cut(s)	44, 599, 704, 811, 1022, 1132, 1166, 1571
MflI	RGATCY	1 cut(s)	574
MhlI	GDGCHC	2 cut(s)	653, 949
MluCI	AATT	9 cut(s)	76, 396, 731, 829, 1227, 1427, 1475, 1517, 1603
MlyI	GAGTC	2 cut(s)	109, 1203
MmeI	TCCRAC	1 cut(s)	434
Mph1103I	ATGCAT	2 cut(s)	512, 1490
MseI	TTAA	6 cut(s)	504, 701, 828, 1101, 1203, 1424
MslI	CAYNNNNRTG	3 cut(s)	419, 520, 993
MspCI	CTTAAG	1 cut(s)	1100
MspI	CCGG	1 cut(s)	401
MspR9I	CCNGG	1 cut(s)	560
Mva1269I	GAATGC	1 cut(s)	1490
MvaI	CCWGG	1 cut(s)	560
MwoI	GCNNNNNNNGC	2 cut(s)	507, 1342
NdeII	GATC	7 cut(s)	67, 574, 598, 961, 1217, 1270, 1437
NlaIV	GGNNCC	5 cut(s)	576, 650, 788, 946, 1386
NmeAIII	GCCGAG	1 cut(s)	613
NmuCI	GTSAC	3 cut(s)	325, 412, 536
NsiI	ATGCAT	2 cut(s)	512, 1490
NspI	RCATGY	2 cut(s)	723, 1264
OliI	CACNNNNGTG	1 cut(s)	520
PagI	TCATGA	1 cut(s)	988
PciI	ACATGT	1 cut(s)	1260
PctI	GAATGC	1 cut(s)	1490
PfeI	GAWTC	7 cut(s)	158, 614, 815, 974, 1002, 1094, 1611
Pfl23II	CGTACG	1 cut(s)	99
PkrI	GCNGC	6 cut(s)	26, 172, 1114, 1338, 1341, 1344
PleI	GAGTC	2 cut(s)	109, 1203
PpsI	GAGTC	2 cut(s)	109, 1203
Ppu21I	YACGTR	1 cut(s)	683
PpuMI	RGGWCCY	1 cut(s)	1045
PscI	ACATGT	1 cut(s)	1260
Psp5II	RGGWCCY	1 cut(s)	1045
Psp6I	CCWGG	1 cut(s)	558
PspFI	CCCAGC	1 cut(s)	1504
PspGI	CCWGG	1 cut(s)	558
PspLI	CGTACG	1 cut(s)	99
PspN4I	GGNNCC	5 cut(s)	576, 650, 788, 946, 1386
PspPI	GGNCC	5 cut(s)	787, 1024, 1045, 1330, 1507
PspPPI	RGGWCCY	1 cut(s)	1045
PstNI	CAGNNNCTG	2 cut(s)	824, 1321
PsuI	RGATCY	1 cut(s)	574
RsaI	GTAC	3 cut(s)	101, 224, 1131
RsaNI	GTAC	3 cut(s)	100, 223, 1130
RseI	CAYNNNNRTG	3 cut(s)	419, 520, 993
SalI	GTCGAC	1 cut(s)	263
SaqAI	TTAA	6 cut(s)	504, 701, 828, 1101, 1203, 1424
SatI	GCNGC	6 cut(s)	25, 171, 1113, 1337, 1340, 1343
Sau3AI	GATC	7 cut(s)	67, 574, 598, 961, 1217, 1270, 1437
Sau96I	GGNCC	5 cut(s)	787, 1024, 1045, 1330, 1507
SchI	GAGTC	2 cut(s)	109, 1203
ScrFI	CCNGG	1 cut(s)	560
SduI	GDGCHC	2 cut(s)	653, 949
SexAI	ACCWGGT	1 cut(s)	558
SfaNI	GCATC	3 cut(s)	884, 1186, 1524
SinI	GGWCC	4 cut(s)	787, 1024, 1045, 1330
SmiMI	CAYNNNNRTG	3 cut(s)	419, 520, 993
SmlI	CTYRAG	3 cut(s)	1028, 1100, 1346
SmoI	CTYRAG	3 cut(s)	1028, 1100, 1346
SnaBI	TACGTA	1 cut(s)	683
Sse9I	AATT	9 cut(s)	76, 396, 731, 829, 1227, 1427, 1475, 1517, 1603
SsiI	CCGC	1 cut(s)	335
SspMI	CTAG	1 cut(s)	902
StyD4I	CCNGG	1 cut(s)	558
StyI	CCWWGG	1 cut(s)	141
TaaI	ACNGT	4 cut(s)	418, 826, 1076, 1129
TaiI	ACGT	3 cut(s)	105, 438, 685
TaqI	TCGA	6 cut(s)	137, 264, 705, 1172, 1448, 1626
TasI	AATT	9 cut(s)	76, 396, 731, 829, 1227, 1427, 1475, 1517, 1603
TfiI	GAWTC	7 cut(s)	158, 614, 815, 974, 1002, 1094, 1611
Tru1I	TTAA	6 cut(s)	504, 701, 828, 1101, 1203, 1424
Tru9I	TTAA	6 cut(s)	504, 701, 828, 1101, 1203, 1424
TscAI	CASTG	3 cut(s)	571, 797, 1122
TseFI	GTSAC	3 cut(s)	325, 412, 536
TseI	GCWGC	6 cut(s)	24, 170, 1112, 1336, 1339, 1342
Tsp45I	GTSAC	3 cut(s)	325, 412, 536
TspDTI	ATGAA	6 cut(s)	351, 408, 762, 828, 1512, 1572
TspGWI	ACGGA	1 cut(s)	1037
TspRI	CASTG	3 cut(s)	571, 797, 1122
Vha464I	CTTAAG	1 cut(s)	1100
VpaK11BI	GGWCC	4 cut(s)	787, 1024, 1045, 1330
XagI	CCTNNNNNAGG	1 cut(s)	1325
XapI	RAATTY	2 cut(s)	76, 396
XceI	RCATGY	2 cut(s)	723, 1264
XmiI	GTMKAC	1 cut(s)	264
XspI	CTAG	1 cut(s)	902
Zsp2I	ATGCAT	2 cut(s)	512, 1490

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.