Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009251

Physical Location & Seq

Genomic Coordinates Reverse (-)

17492013 .. 17492806

Gene Structure 794 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G37140.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 411 bp

ATGAAACATTATGTTCTTGTTCACGGCGGTTGCCACGGCGCATGGTGCTGGTACAAGGTCAAACCGGTGCTGGAAGCTTCAGGCCACCGTGTAACCGTTGTTGATCTTACGGCTTCTGGTGTGAACATGAGCAAAGTGGAAGAGATTCAGACTTTGGCGGATTACGCTAAGCCGTTGCTTGAAGTTCTCGAGTCGTTTGGTTCAGAGGATAAGGTTATCCTCGTTGCACATAGCCTCGGAGGGATATCAGTTGGTCTTGCAGCTGACATGTTTCCTAGTAAGATCTCTGTTGCTGTCTTCATAACCTCTTTCATGCCTGATACAACGAATCCACACCTTTTTATGTTTTCGAAAAGTTTCGTGGGAGCGTTGTGGAGTTTGAGACATATGGGACACATGATCGTCCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0006082 GO:0006725 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009627 GO:0009696 GO:0009790 GO:0009791 GO:0009793 GO:0009814 GO:0009817 GO:0009987 GO:0010154 GO:0010817 GO:0016137 GO:0016139 GO:0016787 GO:0016788 GO:0016829 GO:0016830 GO:0016832 GO:0016999 GO:0017144 GO:0018958 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0032787 GO:0042445 GO:0042537 GO:0043207 GO:0043436 GO:0044237 GO:0044281 GO:0045087 GO:0046593 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0052689 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0080030 GO:0080031 GO:0080032 GO:0098542 GO:1901135 GO:1901136 GO:1901360 GO:1901575 GO:1901615 GO:1901657 GO:1901658

KEGG Pathways

Metabolic & Signaling

ko00460 ko01110 map00460 map01110

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6

Protein Analysis

136

Amino Acids

14.87

Weight (kDa)

6.69

Isoelectric Point (pI)

29.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Abhydrolase_6	PF12697	5 - 87	4.4e-13	Alpha/beta hydrolase family
Abhydrolase_1	PF00561	5 - 92	5.5e-11	alpha/beta hydrolase fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009251)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50440 AT4G37140 AT4G37140
fragaria_vesca	FvH4_1g14950
malus_domestica	MD02G1163100.v1.1 MD16G1272500.v1.1
prunus_persica	Prupe.7G140900_v2.0.a1
pyrus_communis	pycom02g12930
rosa_chinensis	RchiOBHm_Chr2g0104001
rosa_laevigata	RLG00000017276
rosa_multiflora	Rmu_co8299591.1_g000001 Rmu_co8302563.1_g000001 Rmu_sc0001720.1_g000016 Rmu_sc0019524.1_g000004
rosa_roxburghii	Rroxscaffold_2G00139220
rosa_rugosa	Rorug02G0118400 Rorug02G0118400
rosa_samantha	Rh2AG167800 Rh2BG174800 Rh2CG173500 Rh2DG173300
rosa_wichuraiana	Rw2G013120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	27, 158
AcuI	CTGAAG	1 cut(s)	63
AfaI	GTAC	1 cut(s)	53
AflIII	ACRYGT	1 cut(s)	267
AgeI	ACCGGT	1 cut(s)	64
AgsI	TTSAA	1 cut(s)	182
AluBI	AGCT	2 cut(s)	77, 263
AluI	AGCT	2 cut(s)	77, 263
Alw26I	GTCTC	1 cut(s)	376
Ama87I	CYCGRG	1 cut(s)	188
AoxI	GGCC	1 cut(s)	82
ApeKI	GCWGC	1 cut(s)	260
AsiGI	ACCGGT	1 cut(s)	64
Asp700I	GAANNNNTTC	2 cut(s)	144, 356
AspLEI	GCGC	1 cut(s)	41
AsuII	TTCGAA	1 cut(s)	350
AvaI	CYCGRG	1 cut(s)	188
BbsI	GAAGAC	1 cut(s)	289
BbvI	GCAGC	1 cut(s)	272
BceAI	ACGGC	4 cut(s)	40, 52, 126, 157
BcoDI	GTCTC	1 cut(s)	376
BfaI	CTAG	1 cut(s)	276
BglII	AGATCT	1 cut(s)	282
BisI	GCNGC	1 cut(s)	261
BlpI	GCTNAGC	1 cut(s)	168
BlsI	GCNGC	1 cut(s)	262
BmeT110I	CYCGRG	1 cut(s)	188
BpiI	GAAGAC	1 cut(s)	289
Bpu1102I	GCTNAGC	1 cut(s)	168
Bpu14I	TTCGAA	1 cut(s)	350
BsaJI	CCNNGG	2 cut(s)	34, 235
BsaWI	WCCGGW	1 cut(s)	64
Bse118I	RCCGGY	1 cut(s)	64
BseDI	CCNNGG	2 cut(s)	34, 235
BseXI	GCAGC	1 cut(s)	272
BshFI	GGCC	1 cut(s)	84
BshTI	ACCGGT	1 cut(s)	64
BsiHKCI	CYCGRG	1 cut(s)	188
BsiSI	CCGG	1 cut(s)	65
BslFI	GGGAC	1 cut(s)	405
BsmAI	GTCTC	1 cut(s)	376
BsmFI	GGGAC	1 cut(s)	405
BsnI	GGCC	1 cut(s)	84
BsoBI	CYCGRG	1 cut(s)	188
Bsp119I	TTCGAA	1 cut(s)	350
Bsp143I	GATC	3 cut(s)	103, 282, 399
Bsp1720I	GCTNAGC	1 cut(s)	168
BspACI	CCGC	2 cut(s)	27, 158
BspANI	GGCC	1 cut(s)	84
BspT104I	TTCGAA	1 cut(s)	350
BsrFI	RCCGGY	1 cut(s)	64
BssAI	RCCGGY	1 cut(s)	64
BssECI	CCNNGG	2 cut(s)	34, 235
BssMI	GATC	3 cut(s)	103, 282, 399
Bst4CI	ACNGT	2 cut(s)	89, 97
Bst6I	CTCTTC	1 cut(s)	135
BstBI	TTCGAA	1 cut(s)	350
BstDEI	CTNAG	1 cut(s)	168
BstDSI	CCRYGG	1 cut(s)	34
BstHHI	GCGC	1 cut(s)	41
BstKTI	GATC	3 cut(s)	106, 285, 402
BstMAI	GTCTC	1 cut(s)	376
BstMBI	GATC	3 cut(s)	103, 282, 399
BstMWI	GCNNNNNNNGC	2 cut(s)	45, 164
BstNSI	RCATGY	1 cut(s)	271
BstV1I	GCAGC	1 cut(s)	272
BstV2I	GAAGAC	1 cut(s)	289
BstX2I	RGATCY	1 cut(s)	282
BstYI	RGATCY	1 cut(s)	282
BsuRI	GGCC	1 cut(s)	84
BtgI	CCRYGG	1 cut(s)	34
CfoI	GCGC	1 cut(s)	41
Cfr10I	RCCGGY	1 cut(s)	64
Csp6I	GTAC	1 cut(s)	52
CspAI	ACCGGT	1 cut(s)	64
CviAII	CATG	5 cut(s)	42, 127, 268, 313, 397
CviJI	RGCY	6 cut(s)	77, 84, 113, 172, 234, 263
CviKI_1	RGCY	6 cut(s)	77, 84, 113, 172, 234, 263
CviQI	GTAC	1 cut(s)	52
DdeI	CTNAG	1 cut(s)	168
DpnI	GATC	3 cut(s)	105, 284, 401
DpnII	GATC	3 cut(s)	103, 282, 399
Eam1104I	CTCTTC	1 cut(s)	135
EarI	CTCTTC	1 cut(s)	135
EciI	GGCGGA	1 cut(s)	173
Eco32I	GATATC	1 cut(s)	246
Eco57I	CTGAAG	1 cut(s)	63
Eco88I	CYCGRG	1 cut(s)	188
EcoRV	GATATC	1 cut(s)	246
FaeI	CATG	5 cut(s)	45, 130, 271, 316, 400
FaqI	GGGAC	1 cut(s)	405
FatI	CATG	5 cut(s)	41, 126, 267, 312, 396
FauNDI	CATATG	1 cut(s)	387
Fnu4HI	GCNGC	1 cut(s)	261
Fsp4HI	GCNGC	1 cut(s)	261
FspBI	CTAG	1 cut(s)	276
GlaI	GCGC	1 cut(s)	40
GluI	GCNGC	1 cut(s)	261
HaeIII	GGCC	1 cut(s)	84
HapII	CCGG	1 cut(s)	65
HhaI	GCGC	1 cut(s)	41
Hin1II	CATG	5 cut(s)	45, 130, 271, 316, 400
Hin6I	GCGC	1 cut(s)	39
HinP1I	GCGC	1 cut(s)	39
HindIII	AAGCTT	1 cut(s)	75
HinfI	GANTC	3 cut(s)	145, 191, 328
HpaII	CCGG	1 cut(s)	65
Hpy166II	GTNNAC	2 cut(s)	22, 124
Hpy188I	TCNGA	3 cut(s)	150, 205, 239
Hpy188III	TCNNGA	1 cut(s)	188
Hpy8I	GTNNAC	2 cut(s)	22, 124
HpyCH4III	ACNGT	2 cut(s)	89, 97
HpyCH4V	TGCA	2 cut(s)	227, 260
HpyF10VI	GCNNNNNNNGC	2 cut(s)	45, 164
HpyF3I	CTNAG	1 cut(s)	168
Hsp92II	CATG	5 cut(s)	45, 130, 271, 316, 400
HspAI	GCGC	1 cut(s)	39
Kzo9I	GATC	3 cut(s)	103, 282, 399
LmnI	GCTCC	1 cut(s)	365
LpnPI	CCDG	6 cut(s)	34, 56, 66, 78, 102, 330
Lsp1109I	GCAGC	1 cut(s)	272
MaeI	CTAG	1 cut(s)	276
MaeIII	GTNAC	1 cut(s)	91
MalI	GATC	3 cut(s)	105, 284, 401
MboI	GATC	3 cut(s)	103, 282, 399
MboII	GAAGA	2 cut(s)	152, 289
MflI	RGATCY	1 cut(s)	282
MlyI	GAGTC	1 cut(s)	200
MnlI	CCTC	5 cut(s)	199, 230, 233, 245, 316
MroXI	GAANNNNTTC	2 cut(s)	144, 356
MspA1I	CMGCKG	1 cut(s)	263
MspI	CCGG	1 cut(s)	65
MwoI	GCNNNNNNNGC	2 cut(s)	45, 164
NdeI	CATATG	1 cut(s)	387
NdeII	GATC	3 cut(s)	103, 282, 399
NlaIII	CATG	5 cut(s)	45, 130, 271, 316, 400
NspI	RCATGY	1 cut(s)	271
NspV	TTCGAA	1 cut(s)	350
PaeR7I	CTCGAG	1 cut(s)	188
PciI	ACATGT	1 cut(s)	267
PdmI	GAANNNNTTC	2 cut(s)	144, 356
PfeI	GAWTC	2 cut(s)	145, 328
PinAI	ACCGGT	1 cut(s)	64
PkrI	GCNGC	1 cut(s)	262
PleI	GAGTC	1 cut(s)	199
PpsI	GAGTC	1 cut(s)	199
PscI	ACATGT	1 cut(s)	267
PsuI	RGATCY	1 cut(s)	282
PvuII	CAGCTG	1 cut(s)	263
RsaI	GTAC	1 cut(s)	53
RsaNI	GTAC	1 cut(s)	52
SatI	GCNGC	1 cut(s)	261
Sau3AI	GATC	3 cut(s)	103, 282, 399
SchI	GAGTC	1 cut(s)	200
SetI	ASST	6 cut(s)	60, 79, 216, 265, 308, 339
Sfr274I	CTCGAG	1 cut(s)	188
SfuI	TTCGAA	1 cut(s)	350
SlaI	CTCGAG	1 cut(s)	188
SmlI	CTYRAG	1 cut(s)	188
SmoI	CTYRAG	1 cut(s)	188
SsiI	CCGC	2 cut(s)	27, 158
SspMI	CTAG	1 cut(s)	276
TaaI	ACNGT	2 cut(s)	89, 97
TaqI	TCGA	2 cut(s)	189, 350
TfiI	GAWTC	2 cut(s)	145, 328
TseI	GCWGC	1 cut(s)	260
TspDTI	ATGAA	3 cut(s)	17, 289, 301
XceI	RCATGY	1 cut(s)	271
XhoI	CTCGAG	1 cut(s)	188
XmnI	GAANNNNTTC	2 cut(s)	144, 356
XspI	CTAG	1 cut(s)	276

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.